Mono-Nucleotide Repeats in Yeast Complete Genome Sequences
Mono-Nucleotide Repeats in Yeast Complete Genome Sequences
Genomic Sequence:
gi|6319247|ref|NC_001133.1|| Saccharomyces cerevisiae chromosome I, complete chromosome sequence
Position Repeat-length Repeat
6738 20/22 AAAAAAAAAAAAAAAAAAATAC
23714 30/33 AAAAAAAAAAAAAAAAAAAAAAAATTAAATAAA
36423 22/24 TTTTTTTTTTTCTTCTTTTTTTTT
68125 18/20 TTTTTCTTTTTTTTTTTCTT
69822 23/25 TTTTTTTTCTTTTTTTTTTTTTTTG
70909 23/25 AAAAAAAAAAAAAAAAAAAAAATAG
101284 24/26 AAAAAAAAAAAAAAAAAAAAAAAAGG
142287 20/22 TTTTTCTTTCTTTTTTTTTTTT
152094 26/28 TTTTTCTTCTTTTTTTTTTTTTTTTTTT
172004 23/25 AAAAAAAAAAAGAAAAAGAAAAAAA
192542 19/21 AAAAAAAAAAAAAATAAAAAG
199897 21/23 TTTTTTTTTTTTTTTTTTTTTGA
223114 43/47 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCATTTACTTTT
225067 22/24 AAAAAAAAAAAAAAAAAAGAAATA
----------------------------------------------------------------------------
Total sequence length......................... 230203
Total number of repeats detected.............. 14
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 6 6 0 0
30 to 39 1 0 0 0
40 to 49 0 1 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 7 7 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|6319354|ref|NC_001134.1|| Saccharomyces cerevisiae chromosome II, complete chromosome sequence
Position Repeat-length Repeat
9023 21/23 AAAAAAAAAAAAAAAAAAAAGTA
38750 19/21 AAAAAAAAAAACGAAAAAAAA
43099 29/32 TTTTTTTTTTTTTTTTTTTTTTTTTTTGTGCT
88115 18/20 TTTTTCTTTTTTTTTTTTTG
115391 28/31 AAAAAAATAGAAAAAAAAAAAAAAAAAAAAT
122551 24/26 TTTTTTTTTTTTTTTATATTTTTTTT
133907 20/22 TTTTTTTTTCTTTTTTTATTTT
137623 26/28 AAAAAAAAAAAAAAAAAAAAAAAAGAAC
145863 31/34 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTT
165858 31/34 TTTTTCTCTTTTTTTTTTTTTTTTTTTTTTTTCT
192189 18/20 TTTTTACTTTTTTTTTTTTT
274178 22/24 TTTTTTCTTTTTTTTTTTTTTTAT
296086 23/25 TTTTTTTTTTTTTTTTTTTTTTCTC
299994 26/28 AAAAAAAAAAAAAAAAAAAAAAAAAATT
316910 19/21 AAAAAAAAAAAAAAAAAAATG
353446 19/21 AAAAAAAAAAAAGAAAAAACA
386166 21/23 AAAAAAAAAAAAAAAAAAATAAT
415717 22/24 TTTTTCCTTTTTTTTTTTTTTTTT
423347 19/21 AAAAAAAAAAGATAAAAAAAA
426943 18/20 AAAAAAAAAAACAAAAAAGA
492910 21/23 AAAAAAAAAAAAAAAAAAACAAC
499496 21/23 AAAAAAAAAAAAAAAAAAAAATG
530354 18/20 AAAAAATAAAAATAAAAAAA
549578 18/20 AAAAAAAAGAAAGAAAAAAA
561181 24/26 AAAAAAAAAAAAAAAAAAAAAAAAGC
562991 21/23 TTTTTTTTTTTTTTTTTTTTTAC
571288 19/21 AAAAAAAAAAAAAAAAAATGA
575990 18/20 AAAAAAAAAAAAAAAAGGAA
680626 21/23 AAAAAAAAAATAAAAAAATAAAA
681951 22/24 AAAAAAAAAAAAAGAAAGAAAAAA
774628 20/22 AAAAAAAAAAAAAAAACAGAAA
796490 22/24 TTTTTTCTTTTCTTTTTTTTTTTT
809751 19/21 TTTTTTTTTTTTTTTTTTTCA
----------------------------------------------------------------------------
Total sequence length......................... 813140
Total number of repeats detected.............. 33
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 19 10 0 0
30 to 39 2 2 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 21 12 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|6319780|ref|NC_001135.1|| Saccharomyces cerevisiae chromosome III, complete chromosome sequence
Position Repeat-length Repeat
8344 21/23 TTTTTTTTTTTTTTTTTCTCTTT
9172 18/20 TTTTTTTTTTTTTTTGGTTT
23966 18/20 TTTTTATTATTTTTTTTTTT
27642 25/27 AAAAAAAAAAAAAAAAAAAAAAAGAAG
41983 33/36 AAAAAAAAAAAAAAAAAAAAAAATATAAAAAAGAAA
44519 23/25 AAAAAAAAAAAAAAAAAAAAGAAAG
57029 33/36 AAAAAAAAAAAAAAAACAAAAAAAAAAAAACATAAA
57188 34/37 AAAAAAACAAAAAAAAAAAAAAAACAAAAAAAAAACA
101489 20/22 TTTTTTTTTTTTTTTTTTCTTC
107511 20/22 AAAAAAAAAAAATAAAAAAAAC
127395 22/24 TTTTTCTTTTCTTTTTTTTTTTTT
142259 21/23 AAAAAGAAAAAAAAAAAAAAAAC
204406 19/21 TTTTTTTTTTTTGATTTTTTT
208520 19/21 AAAAAAAAAAAAAAGAAAACA
229730 24/26 TTTTTTTTTTTTTTTTTTTTCATTTT
241171 21/23 TTTTTTTTTTTTTTTTTCATTTT
271749 19/21 AAAAAAAAAAAAAAAAAAATT
----------------------------------------------------------------------------
Total sequence length......................... 315339
Total number of repeats detected.............. 17
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 6 8 0 0
30 to 39 3 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 9 8 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|6319952|ref|NC_001136.1|| Saccharomyces cerevisiae chromosome IV, complete chromosome sequence
Position Repeat-length Repeat
15618 18/20 TTTTTTTTTTTTATTATTTT
43858 18/20 TTTTTTTTTTTTTTTTTATA
43889 18/20 AAAAAAAAAAAAAGAAAAAT
92684 26/28 AAAAAAAAAAAAAAAAAAAAAAAAAAGG
99409 19/21 AAAAAAAAAAAAAATGAAAAA
123794 19/21 AAAAAAAAAAAAAAAATAAAT
126533 33/36 TTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCA
135458 18/20 TTTTTTTTTTTTTTTTTTAG
169893 18/20 AAAAAAAAAAAAAAAAAAGC
212442 18/20 TTTTTTTTTTTTTTTTTGTA
212531 18/20 TTTTTTTTTATTTTTTTTTG
273629 25/27 TTTTTTTTTTTTTTTTTTTTTTTTCAT
302323 30/33 AAAAAAAAAAAATAAAAAAAAAATAAAAAAAAG
310285 18/20 AAAAAATGAAAAAAAAAAAA
314304 20/22 AAAAAAAAAAAATAAAAAATAA
332973 20/22 AAAAAAAGAAAAGAAAAAAAAA
336206 19/21 TTTTTTTTTTTTTTTTTTACT
344217 19/21 TTTTTCTTTCTTTTTTTTTTT
364962 18/20 AAAAAAAAAAAAAAATAGAA
369257 37/41 AAAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAGAAAAAG
376572 18/20 TTTTTTTTTTTCATTTTTTT
408160 21/23 AAAAAAACAAAAAAAAAAAACAA
452904 23/25 AAAAAAAAAATAAAAAAATAAAAAA
519894 23/25 TTTTTTTTTTTTTTTTTTTTTTTAG
525251 21/23 TTTTTTTTTTTCTTTTTTTTTTA
548542 19/21 TTTTTTTTTTTTTTTTTTTCA
587835 25/27 TTTTTTTTTTTTTTTTTTTTTTTTCTA
592964 23/25 TTTTTTATTTTGTTTTTTTTTTTTT
607037 31/34 AAAAAAAAAAAAAAAAAGAAAAAAAAGAAAAAGA
621873 24/26 AAAAAAAAAAAAAAAAAAACAAAACA
668935 23/25 AAAAAATTAAAAAAAAAAAAAAAAA
678007 37/41 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTGA
791919 18/20 AAAAAAAAAAAAGAAGAAAA
831704 18/20 AAAAAAAAGAGAAAAAAAAA
838268 20/22 AAAAAAAAAACAAAAAAAAGAA
851109 20/22 AAAAAAAAAAAAATAGAAAAAA
884565 22/24 TTTTTTTTTTTTTTTTTTTTTTCA
892691 36/40 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATGTGTA
894985 21/23 AAAAAAAAAAAATATAAAAAAAA
909719 20/22 TTTTTTTTTTTTTTTTTTTCTC
921805 26/28 AAAAAAAAAAAAAAAAAAAATAAACAAA
929163 23/25 TTTTTTTTTTTCATTTTTTTTTTTT
955978 22/24 AAAAAAAAAAAAAAAAGAAAAAAG
966512 18/20 AAAAAAAAAAAAAAAAAACC
1002283 18/20 TTTTTTTTTTTTTCATTTTT
1012089 22/24 TTTTTTTTTTTGATTTTTTTTTTT
1054839 18/20 TTTTTTTTTTTTCTTTTGTT
1079002 24/26 TTTTTTTTTTTTTTTTTTTTCATTTT
1081050 22/24 TTTTTTTTATTTTTTTTTATTTTT
1084513 19/21 AAAAAAAAAAAAAAAATTAAA
1090106 18/20 AAAAAAAAAAAAAAAAACAG
1130872 18/20 TTTTTTTTTTTTTTATTTTG
1172152 18/20 AAAAAAAACAAAAAAAAAAG
1242671 18/20 TTTTTTTTCTTTTTTTTTTA
1277587 18/20 AAAAAAAAATAAAATAAAAA
1278535 20/22 AAAAAAAAAAAAAGAAAGAAAA
1345309 18/20 AAAAAAATAAAAAGAAAAAA
1357464 38/42 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTGTA
1366907 18/20 TTTTTTTTTTTCTTTTTTAT
1474788 20/22 TTTTTTTTTTTTTTTTTATTAT
----------------------------------------------------------------------------
Total sequence length......................... 1531929
Total number of repeats detected.............. 60
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 27 26 0 0
30 to 39 2 1 0 0
40 to 49 1 3 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 30 30 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|6320755|ref|NC_001137.1|| Saccharomyces cerevisiae chromosome V, complete chromosome sequence
Position Repeat-length Repeat
14725 18/20 AAAAAAAAAAAAAAAAACAT
16065 19/21 TTTTTTCATTTTTTTTTTTTT
33476 18/20 TTTTTTTTTTTTTGTTTTTA
34088 23/25 TTTTTTTTGTTTTTTTTCTTTTTTT
52436 19/21 AAAAAAAAAAAAAGATAAAAA
59360 26/28 TTTTTTTTTTTTCTTTTTTTTTTTTTTC
65294 25/27 AAAAAAAAAAAAAAAAAAAAATAATAA
70383 23/25 AAAAAAAAATAATAAAAAAAAAAAA
73468 22/24 TTTTTTCTTTTTTTTTTTCTTTTT
84904 18/20 AAAAAAAATAAAAAAAAGAA
86489 25/27 AAAAAAAAAAAAAAAAAAAAAAAAAGG
100574 28/31 AAAAAAAAAAAAAAAAAAAAAACAGAAAAAG
115961 22/24 TTTTTTTTTTTTGTTCTTTTTTTT
130723 23/25 TTTTTTTTATTTTATTTTTTTTTTT
148091 18/20 AAAAAAAAAAAAAAAAGAAT
159027 19/21 AAAAAAAAAAAAAAAAAATAC
189352 19/21 TTTTTTTTTATTTTTTTTATT
196609 19/21 AAAAAAAAAAAAAAAATTAAA
225400 18/20 AAAAAAAAAAAGAAAAAAAT
243656 32/35 AAAAAAAAGAAAAAAAAAAAAAAAAAAAAGAAAAG
261464 25/27 AAAAAAAAAAAAAAAAAAAAAATATAA
305699 23/25 AAAAAAAAAAAACAAAACAAAAAAA
333132 21/23 TTTTTTTATTTTTATTTTTTTTT
382295 25/27 TTTTTTTTTTTTTTTTTTTTTTTTTCG
382520 18/20 AAAAAAAAAAAAAAAAAATT
394962 18/20 TTTTTTTTTTTCTTTTCTTT
404485 18/20 TTTTTTTTTTTTTTTTTTCG
415741 22/24 TTTTTTTTTCTTTTTTTTTTTTAT
430735 20/22 AAAAAAAGAAAAAGAAAAAAAA
433168 22/24 TTTTTTTCTATTTTTTTTTTTTTT
455089 18/20 TTTTTATTTTTTTTTTTCTT
503927 19/21 AAAAAAAAAAAAAAGGAAAAA
520938 19/21 TTTTTTTTATTTTTTTCTTTT
522967 20/22 TTTTTTTTTTTTTTTTAGTTTT
545361 26/28 AAAAAAAATAAAAAAAAAAACAAAAAAA
546441 20/22 AAAAAAAAGAAAAAAAAAAGAA
----------------------------------------------------------------------------
Total sequence length......................... 576870
Total number of repeats detected.............. 36
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 17 17 0 0
30 to 39 2 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 19 17 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|6321039|ref|NC_001138.1|| Saccharomyces cerevisiae chromosome VI, complete chromosome sequence
Position Repeat-length Repeat
8296 24/26 AAAAAAATTAAAAAAAAAAAAAAAAA
75903 22/24 TTTTTTTCTTTTTTTTTTTTTTTA
87679 21/23 TTTTTTTGTTTTTTGTTTTTTTT
97615 25/27 AAAAAAAAAAAAAAAATAACAAAAAAA
104553 38/42 AAAAAAAAAAAAAATAAATAAAAAAAAAAAAAAAAAAATAAG
148936 19/21 TTTTTTTTTTTAGTTTTTTTT
180158 21/23 TTTTTTTCTTTTTGTTTTTTTTT
223107 21/23 AAAAAAAAAAAGAAATAAAAAAA
223983 20/22 AAAAAAAAAAAACCAAAAAAAA
226119 20/22 AAAAAAAAAAAAAAATAGAAAA
227465 24/26 TTTTTTTTTTTTTTTTTTTTTCTTAT
265357 18/20 TTTTTTTTCCTTTTTTTTTT
----------------------------------------------------------------------------
Total sequence length......................... 270148
Total number of repeats detected.............. 12
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 5 6 0 0
30 to 39 0 0 0 0
40 to 49 1 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 6 6 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|6321173|ref|NC_001139.1|| Saccharomyces cerevisiae chromosome VII, complete chromosome sequence
Position Repeat-length Repeat
76708 23/25 AAAAAAAAAAAAAGAAAGAAAAAAA
80601 36/40 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCAAAAATG
84756 19/21 TTTTTCTTTTTTTTTTTTTAT
89639 23/25 AAAAAAAATAAAAAAAATAAAAAAA
140318 23/25 AAAAAAAAAAAAAAAAAAAAAAACG
167247 25/27 AAAAAACCAAAAAAAAAAAAAAAAAAA
167627 22/24 AAAAAAAAAAAAAAAAAGAAAAGA
170652 18/20 AAAAAATAAAAAATAAAAAA
278781 26/28 TTTTTTTTTTTTTTTTTTTTTTTTTTAA
323360 34/37 TTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTTCTT
326268 18/20 AAAAAAAAAAAAAAAAAATT
366777 21/23 AAAAAAAAAAAAAAAAAATAAAG
397823 33/36 AAAAAAAAAAGGAAAAAAAAAAAAAAAAAAAATAAA
400548 26/28 TTTTTTTTTTTTTTTTTTTTTATTTTGT
428252 22/24 TTTTTTTTTTTCTTTCTTTTTTTT
440438 18/20 AAAAAAAAAAAAAAATAAAT
448659 19/21 AAAAAAAATAAAAAATAAAAA
483128 18/20 AAAAAAAAAAAAAAGGAAAA
523735 18/20 AAAAAAAAACAAAAAAAGAA
555976 35/38 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAACAG
582525 18/20 AAAAAAAAAAAAAAAAACAC
591131 18/20 AAAAATAAAAAAAAAAAGAA
598988 20/22 AAAAAGAAAAAAAAAAAAGAAA
611505 21/23 AAAAAAAAAAAAAAGAAAAACAA
611565 21/23 TTTTTTTCCTTTTTTTTTTTTTT
617447 22/24 AAAAAAAAAAAAAAGTAAAAAAAA
627181 34/37 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAGTTTT
639654 37/41 AAAAAACAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAGAGA
640612 29/32 TTTTTTTTTTTTTTTTTTTTTTTTATTTTTCG
653217 21/23 TTTTTCTTTTTTTTTTTTTTTTG
678054 28/31 TTTTTTTTTTCTTTTTTTTTTTTTTTTTTCG
699988 29/32 TTTTTCATTTTTTTTTTTTTTTTTTTTTTTCT
733104 20/22 TTTTTTTTTTTTTTTTTTTTCA
742146 25/27 TTTTTCTTTTTTTTTTTTTTTTTTTTC
746570 25/27 TTTTTTTTTTTTTTTTTTTTTTTTTGC
807860 22/24 AAAAAAAAAAAAAAAAAAAGAAAT
823780 22/24 TTTTTTTTTATTTTTTTTTTTTCT
848535 23/25 AAAAAAAAAAAAAAAAGAAAGAAAA
856425 19/21 AAAAAAAAAAAAAGTAAAAAA
871548 19/21 AAAAAATGAAAAAAAAAAAAA
910107 28/31 TTTTTTTTTTTTTTTTTTTTTTTTAATTTAT
977886 21/23 AAAAAAATTAAAAAAAAAAAAAA
985718 23/25 TTTTTTTTTTTTTTTTTTTTTTCAT
999554 18/20 AAAAAAAAAAAAAAATACAA
1010883 22/24 TTTTTCTTTTCTTTTTTTTTTTTT
1011070 19/21 AAAAAAGAAAAAAAAAAAAAT
1011794 20/22 TTTTTGTTTTTTTTTTTTTTTA
1050196 18/20 AAAAAAAAAAACAAAAACAA
----------------------------------------------------------------------------
Total sequence length......................... 1090936
Total number of repeats detected.............. 48
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 25 13 0 0
30 to 39 2 6 0 0
40 to 49 2 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 29 19 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|6862570|ref|NC_001140.2|| Saccharomyces cerevisiae chromosome VIII, complete chromosome sequence
Position Repeat-length Repeat
11864 19/21 TTTTTTTTTTTTGTTTTTTTA
32860 19/21 TTTTTTTTTATTTTTTTTTTC
48098 19/21 AAAAAAAAAAAAAATGAAAAA
81854 31/34 AAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAT
120048 20/22 TTTTTCTGTTTTTTTTTTTTTT
125826 22/24 AAAAAAAAAAAAAAAAAAAAGGAA
149308 18/20 TTTTTTTATTTTTTTCTTTT
173111 28/31 AAAAAAAAAAAAATAATAAAAAAAAAAAAGA
187021 22/24 AAAAAAAAAAAAAAAAAAAAAAGG
189089 18/20 AAAAAAAAAAAAAGAAAAAG
193536 19/21 TTTTTTTTTTTTATTTTTTTG
210256 19/21 TTTTTATTTTTTTTTTTTCTT
212259 18/20 TTTTTTTTTTTTTTTTATTC
214257 18/20 TTTTTTTTTTTTTTTTATTC
229201 21/23 AAAAAAAAAAAAAAAAAAAAGTA
236959 43/47 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAATAAAAATAAATA
237737 18/20 TTTTTTTTTTTTTTTTCCTT
276437 19/21 AAAAAAAAAAAAAGAAAAAGA
282654 19/21 TTTTTTTTTTTATTTTTTTCT
293275 29/32 AAAAAAAAAAAAAAAAAAAAAAAAAAGAGAAT
387092 22/24 TTTTTTTTTTTTTTTTTTTCATTT
391745 18/20 AAAAAAATTAAAAAAAAAAA
396947 19/21 AAAAAAAAAAAAAAAAAAATT
508797 27/30 AAAAAAAAAAAAAAAAAAAAAAAAAAATGT
549759 44/48 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCATTTACTTTT
551714 22/24 AAAAAAAAAAAAAAAAAAAGGAAA
554062 20/22 AAAAAATAAAAAAAAAAAAAAG
----------------------------------------------------------------------------
Total sequence length......................... 562639
Total number of repeats detected.............. 27
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 10 11 0 0
30 to 39 4 0 0 0
40 to 49 1 1 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 15 12 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|6322016|ref|NC_001141.1|| Saccharomyces cerevisiae chromosome IX, complete chromosome sequence
Position Repeat-length Repeat
22808 23/25 AAAAAAAATAAAAAAATAAAAAAAA
100531 18/20 TTTTTTTTTTATTTTCTTTT
102529 21/23 TTTTTTTCTTTTTTTTTTTTTTG
160350 19/21 AAAAAACAAGAAAAAAAAAAA
162988 19/21 TTTTTTTTTTCTTATTTTTTT
163243 24/26 TTTTTTTTTTTTTTTTTTTTTTTCAT
187820 27/30 AAAAAAAAAAAAAAAAAAAAAAAAAAGAGT
197664 18/20 TTTTTTATTCTTTTTTTTTT
241030 29/32 AAAAAAAAAAAAAAAAAAAAACAAAAGAACAA
245960 20/22 TTTTTTTTTTTTTTTTTTTTAG
248932 22/24 TTTTTTTATTTTTATTTTTTTTTT
254002 18/20 AAAAAAAAAAAAAAATGAAA
267870 18/20 AAAAAAAAAAAAAAAATAAC
290193 19/21 AAAAAAAAAAAAAAAAATGAA
339223 26/28 TTTTTTTTTTTTTTTTTTTTTTTTTGCT
370193 18/20 TTTTTTTTTTTTTTTTTTGA
380933 18/20 AAAAAAAAAAAAAAACAAAC
385638 20/22 TTTTTTTTTTTTTTTTTTTGAT
387141 31/34 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGG
389249 18/20 AAAAAGAAAAAAAAAAAAAG
----------------------------------------------------------------------------
Total sequence length......................... 439885
Total number of repeats detected.............. 20
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 7 10 0 0
30 to 39 3 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 10 10 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|6322236|ref|NC_001142.1|| Saccharomyces cerevisiae chromosome X, complete chromosome sequence
Position Repeat-length Repeat
59055 23/25 AAAAAAAAAAAAAAAAAAAAATTAA
60682 23/25 TTTTTTTTTTTTTTGTTTTTTTTTG
67697 18/20 AAAAAAAAAATAAAAAAGAA
75588 19/21 TTTTTTTTTTTTTCATTTTTT
99485 24/26 TTTTTTTTTTTTAATTTTTTTTTTTT
133811 23/25 AAAAAAAAAAAAAAAAATAAAAAAC
136604 28/31 AAAAAGAAAAAAAAAAAAAAAAAAAGAAAAC
160009 19/21 TTTTTTTTTTGCTTTTTTTTT
172261 21/23 TTTTTTTTTTCTTTCTTTTTTTT
195775 19/21 TTTTTTCCTTTTTTTTTTTTT
217145 18/20 AAAAAAGAAAAAAAAAAAAG
246861 20/22 AAAAAAAAAAATAAAAAAACAA
265569 20/22 TTTTTTTTTTTTTTTTTTGCTT
289284 24/26 AAAAAAAAAAAAAAAAAGAAAAAAAG
342045 23/25 TTTTTTTTTTTTTTTTTTTTTTTCA
357909 23/25 TTTTTTTTTTTTTTTTTTTGATTTT
359760 18/20 AAAAAAAAATAGAAAAAAAA
390682 19/21 AAAAAACAAAGAAAAAAAAAA
393520 38/42 AAAAAAAAAAAAAAAAAAATAAAAAATAAAAAATAAAAAAAC
415598 18/20 AAAAAAAATAAAAAAATAAA
424595 26/28 TTTTTTTTTTTTTTTTTTTTTGTATTTT
436178 18/20 TTTTTTTTTTATTTTTTTGT
457582 28/31 AAAAAAATCAAAAAAAAAAAAAAAAAAAAAT
523593 24/26 AAAAAAAAAAAAAAAAGAAAAAAAAT
525384 22/24 AAAAACGAAAAAAAAAAAAAAAAA
525462 28/31 AAAAAAAATAAAAAAAAAAAAAAAAAAAGGA
579937 18/20 TTTTTTTTTTTTTTTTGTTG
607545 18/20 TTTTTTTTTCTTTTTTTCTT
617711 18/20 TTTTTTGTATTTTTTTTTTT
638888 25/27 TTTTTTTTTTTTTTTTTTTTTGCTTTT
639398 20/22 CCCCCCCCCCCCCCCCCCCGCA
663629 19/21 TTTTTTTTCTTTTTTTTTTTA
----------------------------------------------------------------------------
Total sequence length......................... 745440
Total number of repeats detected.............. 32
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 11 16 0 1
30 to 39 3 0 0 0
40 to 49 1 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 15 16 0 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|6322623|ref|NC_001143.1|| Saccharomyces cerevisiae chromosome XI, complete chromosome sequence
Position Repeat-length Repeat
8333 18/20 AAAAAAAAAAAAAGAAAAAG
22041 32/35 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCAG
36503 20/22 AAAAAATAAAAAAATAAAAAAA
67758 37/41 TTTTTCTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTGTTA
182662 18/20 TTTTTTTCGTTTTTTTTTTT
196202 23/25 AAAAAATGAAAAAAAAAAAAAAAAA
212160 19/21 TTTTTATTTTTTTTCTTTTTT
216751 20/22 AAAAAAAAAAAAAAAAGAAAAC
231847 19/21 AAAAAAAAAACAAAAAAAGAA
233676 18/20 AAAAAAAAAAAGTAAAAAAA
276683 19/21 TTTTTTTTTTTTTTGTTTATT
286091 22/24 AAAAAAAAAAAAAAATCAAAAAAA
306899 21/23 AAAAAAAAACAAAAAAAAACAAA
320466 21/23 TTTTTTTTTTTTTTTTTTTTCGT
334746 18/20 AAAAAAAAAAAAAAAACCAA
342384 19/21 AAAAATAAAAAAAAAATAAAA
354824 19/21 AAAAAAAAAAAAAAAGAGAAA
358050 18/20 AAAAAAAAGAAAAAAAAAAC
384742 31/34 TTTTTTTTTTTTTTTTTTTTTTTTGATTTCTTTT
462900 22/24 TTTTTTTTTTTTTTTTTTTTTTGG
517741 36/40 TTTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTC
523673 29/32 TTTTTTTTTTTTTTTTTTTTTTTCGTTTTTAT
557124 23/25 AAAAAAAAAAAGAAAAAAAAAAGAA
575724 18/20 TTTTTTTTATTTTTTTTTTC
617192 20/22 TTTTTTTTTTTTTTTTTTTTAA
635079 35/38 TTTTTTTTTTTCTTTTTTTCTTTTTTTTTTTTTTTTTG
638053 18/20 TTTTTTTTTTTTTTTCTTTC
661031 18/20 AAAAAAAAAAAAAAGAATAA
----------------------------------------------------------------------------
Total sequence length......................... 666445
Total number of repeats detected.............. 28
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 14 8 0 0
30 to 39 1 3 0 0
40 to 49 0 2 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 15 13 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|6322960|ref|NC_001144.1|| Saccharomyces cerevisiae chromosome XII, complete chromosome sequence
Position Repeat-length Repeat
35372 18/20 AAAAACAAAAAAAAAATAAA
48855 35/38 AAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAGAAAAG
63982 20/22 AAAAAAAAAAAAAAACCAAAAA
66612 20/22 TTTTTTCTTTTTTTTTTTTTCT
81387 23/25 AAAAAAAAAAAGAATAAAAAAAAAA
86713 26/28 AAAAAAAAATTAAAAAAAAAAAAAAAAA
108034 22/24 TTTTTCTTTTTCTTTTTTTTTTTT
122008 36/40 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTAAAAAG
129214 26/28 AAAAAAAAAAAGAAAAAAAAAGAAAAAA
167917 21/23 AAAAAAAAAAGAAAAAGAAAAAA
177530 18/20 AAAAAAAAGAAAAAGAAAAA
179752 19/21 TTTTTTTTTTTTTTCATTTTT
179897 21/23 TTTTTTTTTTTTTGCTTTTTTTT
196743 23/25 TTTTTTTTATTTTTTTTTTTTTTTA
251196 21/23 AAAAAAAAAAAAAAAAAATAAAC
259716 18/20 TTTTTTCTTTTTTTTTTTCT
263309 18/20 AAAAAAAAAAAAATAAAAAT
264072 35/38 TTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTCTCTTT
280998 18/20 AAAAAAAAAAAAAAAAAGGA
282686 19/21 TTTTTTTTATTTTTTTTTTTG
426656 20/22 AAAAAACCAAAAAAAAAAAAAA
451541 28/31 AAAAAAAAAAAAAAAATAAAAAATAAAAAGA
459805 33/36 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTAGTTT
460004 18/20 AAAAAAAAAAAAAAAAACAC
460385 22/24 AAAAAAAAAAAAAAAAAAAAAATG
460678 28/31 AAAAAAAAAAAAAAAATAAAAAATAAAAAGA
560591 19/21 TTTTTTCTTTGTTTTTTTTTT
585921 24/26 AAAAAAAAAAAAAAAAAAAAAAGAAT
614334 20/22 AAAAAAAAAGAAAAACAAAAAA
626428 19/21 AAAAATGAAAAAAAAAAAAAA
636552 28/31 TTTTTTTTTTTTTTTTCTTTTTCTTTTTTTG
645232 18/20 AAAAAAAAAAAAAAAAGGAA
646380 18/20 AAAAAGAAAAAAAAAAAAAG
687553 18/20 TTTTTTATTTATTTTTTTTT
699928 31/34 AAAAAAAAAGAGAAAAAAAAAAAAAAAAAAAAAG
704139 19/21 AAAAAAAAAAAAAAAAAAATG
704441 20/22 TTTTTTTTTCATTTTTTTTTTT
723163 20/22 AAAAACAAAAAAAAAAAAAATA
766496 30/33 AAAAATTAAAAAAAAAAAAAAAAAAAAAAAAAC
793990 18/20 TTTTTCATTTTTTTTTTTTT
826611 24/26 TTTTTCTTTTTTTTTTATTTTTTTTT
950291 21/23 TTTTTTTTCTTTTTTTTTTTGTT
1002209 24/26 AAAAAAAAAAAAAAAAAAAGAAGAAA
1019111 20/22 AAAAAAAAAAAAAAATAAAATA
1024975 24/26 TTTTTTTTTTTTTTTTTTTTGTTTAT
1053289 21/23 TTTTTTTTTTTTTTTTTGATTTT
1059673 18/20 AAAAAAAAAAAAAAAACTAA
----------------------------------------------------------------------------
Total sequence length......................... 1078172
Total number of repeats detected.............. 47
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 23 15 0 0
30 to 39 5 3 0 0
40 to 49 1 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 29 18 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|6323501|ref|NC_001145.1|| Saccharomyces cerevisiae chromosome XIII, complete chromosome sequence
Position Repeat-length Repeat
26540 25/27 TTTTTTTTTTTAATTTTTTTTTTTTTT
26717 19/21 TTTTTTTTTTTTTTTTTCATT
41951 20/22 AAAAAAAAAAAAAAAAAAAATT
49838 19/21 TTTTTTTTTTTTTCTTTCTTT
97783 18/20 TTTTTTTTTTTATTTTTTGT
129677 18/20 AAAAAAAAAAATAAAAAAAT
158397 26/28 AAAAAAAAAAAAAAAAAAAAAAAAGAAG
164393 25/27 TTTTTTTTTTTTTTTTTTTTTTTTTCA
165423 22/24 TTTTTTTTTTTTTTTTTTTTTTGA
191983 34/37 TTTTTTTATTTTTTTTTTTTTTTTTTTTTTCATTTTT
238764 25/27 TTTTTTTTTTTTTTTTTTTTTTTTCCT
348556 23/25 TTTTTATTTCTTTTTTTTTTTTTTT
387095 19/21 TTTTTTTTTTTTTTTTTTTCA
409001 19/21 AAAAAAAAAAAGAAAAAAAAG
411372 22/24 TTTTTTCTTTTTTTTTTTTCTTTT
411450 21/23 TTTTTTTGTTGTTTTTTTTTTTT
426216 21/23 TTTTTTTATTTTTTTTTTTTCTT
483743 30/33 AAAAAAAAAAAAAAAAAAAAAAATGAAAAAGAA
559048 22/24 AAAAAAAAAAAAAGAAAAACAAAA
571250 21/23 AAAAAAAAAAAAAAAAGAAAACA
625412 24/26 AAAAAAAAAAGAAAAAAAGAAAAAAA
625708 29/32 TTTTTTTTTTTTTTTTTTTTAATTTTTTTTGT
667202 19/21 AAAAAAAAAAAAAAAAACAAG
674863 19/21 AAAAAAAAAAAAAAAAAGGAA
772664 20/22 TTTTTTTTTTTTTTTTTTTACT
822590 40/44 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATTTCATTT
851714 25/27 AAAAAAAAAAAAAAAAAAAAAGGAAAA
854410 22/24 TTTTTTTTCTTTCTTTTTTTTTTT
874560 22/24 TTTTTTTTTTTTTTTTTTTTCATT
914814 24/26 TTTTTTTTTTTGGTTTTTTTTTTTTT
918033 18/20 AAAAAAAAAAAAGAAAAAAG
918120 21/23 TTTTTTTTTTTTTTTTTTTATAT
921418 22/24 TTTTTTTTTTTTTTGTTTTTTTAT
----------------------------------------------------------------------------
Total sequence length......................... 924430
Total number of repeats detected.............. 33
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 11 18 0 0
30 to 39 1 2 0 0
40 to 49 0 1 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 12 21 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|6323989|ref|NC_001146.1|| Saccharomyces cerevisiae chromosome XIV, complete chromosome sequence
Position Repeat-length Repeat
10206 24/26 AAAAAAATTAAAAAAAAAAAAAAAAA
33228 19/21 TTTTTTTATTTTTTTATTTTT
40488 18/20 TTTTTTTTTCTATTTTTTTT
118986 20/22 AAAAAAAAAAAAAAAAACAGAA
154923 25/27 AAAAAAAAAAAAAAAAAAAAAAAAAGG
196150 18/20 TTTTTTTTTTTTTTTTTTCA
221033 19/21 TTTTTTTTTCTTTTTTCTTTT
300927 38/42 AAAAAAAAAAAAAAAAAATAAAAAAAAAAGAAAAAAAAAGGA
321977 18/20 TTTTTTTTTTTTTTTATTAT
357010 32/35 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCG
359343 45/50 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAATCTTA
394514 21/23 TTTTTCTTTTTTTCTTTTTTTTT
413434 36/40 TTTTTTTATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTAC
415045 59/65 TTTTTTCTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTCTTTTTTTCTTTTTTTTTTTTTTGA
444649 21/23 TTTTTTTTTTTTTTTGTTATTTT
479457 22/24 TTTTTTTTTTTTTTTTTTTTTTCC
486550 21/23 AAAAAAAAAAAAAAAAAAAAAGC
493043 25/27 AAAAAATTAAAAAAAAAAAAAAAAAAA
501127 18/20 TTTTTTTTTTTTACTTTTTT
554916 20/22 AAAAAAAAAAATTAAAAAAAAA
663736 18/20 AAAAAAACAAAAAAAAAAGA
667311 40/44 TTTTTTTTTACTTTTTTTTTTTTTTTTTTTTTTTTTTATTATTT
678601 19/21 AAAAAAAAAAAAAAATGAAAA
692518 18/20 AAAAAAAAAAAAAAGCAAAA
721032 22/24 AAAAAAAAAAATAACAAAAAAAAA
722271 18/20 AAAAAAAAAAAAAAAAAAGT
772608 33/36 AAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAA
774545 18/20 TTTTTTTTTTTTTTTTTTAC
779304 27/30 AAAAAAAAAAAAAAAAAAAAAAAACAAGAG
----------------------------------------------------------------------------
Total sequence length......................... 784328
Total number of repeats detected.............. 29
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 11 10 0 0
30 to 39 2 1 0 0
40 to 49 1 2 0 0
50 to 59 0 1 0 0
60 to 69 0 1 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 14 15 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|6324406|ref|NC_001147.1|| Saccharomyces cerevisiae chromosome XV, complete chromosome sequence
Position Repeat-length Repeat
13997 29/32 AAAAAAAAAAAAAGAAAAAGAAAAAAAAAAAC
21720 19/21 AAAAACGAAAAAAAAAAAAAA
60213 25/27 TTTTTTTTTTTTTTTTTTTTTTTTCTC
79521 18/20 TTTTTTTTTGTTTGTTTTTT
85382 18/20 TTTTTTTTTTTTTTTCTTTA
87307 19/21 TTTTTTTTATTTATTTTTTTT
93845 18/20 AAAAAAAAAAAATGAAAAAA
101333 22/24 AAAAAAAAAATAAAATAAAAAAAA
141464 20/22 AAAAATGAAAAAAAAAAAAAAA
200339 23/25 TTTTTTTTTTTTTTTTTTTTTTTGG
204564 23/25 TTTTTCTTTTTTTTTTTTTTTTTTC
216898 22/24 TTTTTTTTTTTTTTTTTTGGTTTT
243128 18/20 AAAAAAAAAAACAAGAAAAA
254810 20/22 AAAAAAAAAATAAAAAAAAAAG
271954 19/21 TTTTTTTTTTTAGTTTTTTTT
315622 26/28 TTTTTTTTCTTTTTTTTTTTTTTTTTTG
392103 18/20 AAAAAAAAGGAAAAAAAAAA
412675 19/21 TTTTTTTTTTTTTTTATTGTT
426605 18/20 AAAAAAAAAAAAAAAACGAA
430161 38/42 AAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAGG
444500 18/20 TTTTTTTTTTTTTTTTTTCA
448672 26/28 AAAAAAAAAAAAAAAAAAAAAAAAAGAT
479260 35/38 TTTTTTTTTTTTTTTATTTTTTTATTTTTTTTTGTTTT
479410 19/21 AAAAAAATAAAAAAAACAAAA
522802 34/37 AAAAAATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAT
537237 18/20 TTTTTATTTTTGTTTTTTTT
560801 18/20 AAAAATGAAAAAAAAAAAAA
581668 22/24 AAAAAAAAAAAAAAAGAAAAAGAA
630801 19/21 AAAAAAAAGAAAAAAGAAAAA
665685 20/22 AAAAAAAAAAAGTAAAAAAAAA
670766 23/25 AAAAAAAAAAAAAAAAAAAGTAAAA
675323 19/21 TTTTTTTTTTTTTTTTTTTGG
724931 20/22 TTTTTTTGTTTTTTTTTTCTTT
768265 27/30 AAAAAAAAAAAAAATAAAAAAAAAAAAGAT
770623 18/20 TTTTTTTTTTTTTTTTTTCA
785509 21/23 AAAAAAAACAAAAAAAAAAACAA
798498 20/22 AAAAAAAAAAATAAAATAAAAA
804920 20/22 TTTTTTTTTTTTTTTTGGTTTT
830819 21/23 TTTTTTTTGCTTTTTTTTTTTTT
882610 27/30 TTTTTCTTTTTTTTTTTTTTTTTTTTCTTC
888841 24/26 TTTTTTTTTTTTTTTTTTTTTTTTCA
889735 23/25 AAAAATAAAAAAAAAAAAAAAAACA
909068 23/25 TTTTTTTTTTTTTTTTGCTTTTTTT
930490 19/21 AAAAAAAGAGAAAAAAAAAAA
944450 37/41 TTTTTTTTTTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTGC
954133 26/28 TTTTTTTTTTTTTTTTTTTTTTTTTTCG
960767 21/23 AAAAAAAAAAAAAAAGAAAAAAT
976982 18/20 TTTTTTTTTTTTATCTTTTT
989698 22/24 AAAAAAAAAAAAAGAAAAAAAAAG
1000958 24/26 TTTTTTCATTTTTTTTTTTTTTTTTT
1004250 22/24 TTTTTTTTTTTTTATATTTTTTTT
1005023 18/20 TTTTTTTTACTTTTTTTTTT
1031374 23/25 TTTTTTTTTTTTTTTTTTTTTTTCA
1074059 20/22 AAAAACAAAATAAAAAAAAAAA
1077943 21/23 TTTTTTTTTTTTTTTTTTTAATT
1081599 28/31 TTTTTTTTTTTTTTTTTTTTGTTTTTTTATG
----------------------------------------------------------------------------
Total sequence length......................... 1091283
Total number of repeats detected.............. 56
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 22 26 0 0
30 to 39 3 3 0 0
40 to 49 1 1 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 26 30 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|6324971|ref|NC_001148.1|| Saccharomyces cerevisiae chromosome XVI, complete chromosome sequence
Position Repeat-length Repeat
9511 31/34 AAAAAAACAAAAAAAAAAAAAAAAAAAAAGGAAA
16996 20/22 TTTTTTTTTTTTTTTTTATGTT
46582 27/30 TTTTTTTTTTTCATTTTTTTTTTTTTTTTC
73097 21/23 TTTTTTTGTTTTTTTTGTTTTTT
85403 18/20 AAAAAAAAAAAAAAAAAGAG
132456 18/20 AAAAAAAAAAAAAAAAGAGA
153278 18/20 AAAAAAAAAAAAAGAAAATA
188703 19/21 AAAAAAAATAAAAAAAGAAAA
188928 21/23 TTTTTTTTTCTTTTTTTTTTCTT
191306 21/23 AAAAAAAAATAAAAATAAAAAAA
192966 20/22 AAAAAAAAAAAAAAAAAAAAGT
212901 19/21 AAAAAAAAAAAAAAAAAATCA
215680 21/23 AAAAACAAGAAAAAAAAAAAAAA
235126 18/20 TTTTTTTTCTTTTTTGTTTT
246835 19/21 AAAAAAAAAAAAAAATCAAAA
296837 20/22 TTTTTTTTTTTTTTCTTCTTTT
302883 21/23 TTTTTTTTCTTTTTTTTTTTTCT
329080 23/25 AAAAAAAGAAAAAAGAAAAAAAAAA
352492 22/24 AAAAAAAAAAAGAAAAAAAGAAAA
404755 19/21 TTTTTTTTTTTTTTTTTTTCA
462240 26/28 AAAAAAAAAAAAAAAAAAAAAAGACAAA
475090 18/20 AAAAAAAAAAGGAAAAAAAA
481293 19/21 TTTTTTATTTTTTTTTTTTTG
502676 25/27 AAAAAAAAAAAAAAAAAGAAAAAAAGA
503375 33/36 AAAAAAGAAAAAAAAAAAAAAAAAAAAAAAGAAAAG
528949 20/22 TTTTTCTTTTTTTTTTTTTTTC
581334 28/31 AAAAAAAAAAAAAAAAAAAAAAAAAAACACT
592125 19/21 AAAAAAAAAAAAAATAAAAGA
607435 18/20 AAAAAAAATAAAAAAATAAA
607463 23/25 AAAAAAAAAAAAAACAAAAAAAACA
615253 19/21 AAAAAAAAAAAAAAAAAGAAT
643559 19/21 TTTTTTCTTTTTTTTTTTTTG
655075 25/27 AAAAAAAAAAAAAAAAAAAAACCAAAA
675804 18/20 AAAAAAAAAAAAAAAGAGAA
698522 18/20 AAAAAAAAAAAAAAAAAATT
700417 18/20 TTTTTTTTTTTGATTTTTTT
711284 18/20 TTTTTCTTTTTTTTTTTATT
821608 19/21 TTTTTTCTTTTTCTTTTTTTT
835341 18/20 TTTTTTTTTCTTTTTTTTTA
840623 26/28 TTTTTTTTTTTTTTTTTTTTTTTTTTCA
868367 18/20 TTTTTTTTTTTTTTTTAATT
886450 26/28 TTTTTTTTTTTTTTTTATTTTTTATTTT
----------------------------------------------------------------------------
Total sequence length......................... 948061
Total number of repeats detected.............. 42
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 21 17 0 0
30 to 39 3 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 24 18 0 0
----------------------------------------------------------------------------
Mono-Nucleotide Repeats in Yeast Complete Genome Sequences
Minimum repeat length = 20 (allowing maximum 10% mismatch)
Total 16 sequences searched with 12069248 base pairs
Total 534 repeats covering 11959 / 13133 base pairs
Length distribution of all Mono-nucleotide repeats
--------------------------------------------------------------------------------------------------------
repeat-length 20-29 30-39 40-49 50-59 60-69 70-79 80-89 90-99 100-and-more
no. of repeats 453 59 20 1 1 0 0 0 0
---------------------------------------------------------------------------------------------------------
Number of repeats
----------------------------------------------------------------------------------------
Sequence A T G C
----------------------------------------------------------------------------------------
gi|6319247|ref|NC_001133. 230203 bp 7 7 0 0
gi|6319354|ref|NC_001134. 813140 bp 21 12 0 0
gi|6319780|ref|NC_001135. 315339 bp 9 8 0 0
gi|6319952|ref|NC_001136. 1531929 bp 30 30 0 0
gi|6320755|ref|NC_001137. 576870 bp 19 17 0 0
gi|6321039|ref|NC_001138. 270148 bp 6 6 0 0
gi|6321173|ref|NC_001139. 1090936 bp 29 19 0 0
gi|6862570|ref|NC_001140. 562639 bp 15 12 0 0
gi|6322016|ref|NC_001141. 439885 bp 10 10 0 0
gi|6322236|ref|NC_001142. 745440 bp 15 16 0 1
gi|6322623|ref|NC_001143. 666445 bp 15 13 0 0
gi|6322960|ref|NC_001144. 1078172 bp 29 18 0 0
gi|6323501|ref|NC_001145. 924430 bp 12 21 0 0
gi|6323989|ref|NC_001146. 784328 bp 14 15 0 0
gi|6324406|ref|NC_001147. 1091283 bp 26 30 0 0
gi|6324971|ref|NC_001148. 948061 bp 24 18 0 0
----------------------------------------------------------------------------------------
Total 12069248 bp 281 252 0 1
----------------------------------------------------------------------------------------
Repeats >= 40 bp Total> 22 9 13 0 0
----------------------------------------------------------------------------------------
© Division of Biochemical Sciences, National Chemical Laboratory, Pune 411008, INDIA