Tetra-Nucleotide Repeats in Genomic Sequences
Tetra-Nucleotide Repeats in
Drosophila melanogaster Chromosome-Arm-3R Genomic Scaffolds
Genomic sequence...
gi|7316099|gb|AE002681.1|AE002681 Drosophila melanogaster genomic scaffold 142000013386043, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 0
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7296880|gb|AE003607.1|AE003607 Drosophila melanogaster genomic scaffold 142000013386043 section 8 of 8, complete sequence
Position Repeat Coverage Repeat
10 GTCT * 5 18/20 GTCT GTCT GTCC GTCT GTGT
12736 TGTA * 5 18/20 TGTA TGTA TGTA CATA TGTA
-----------------------------------------------------------------------------
Total sequence length......................... 95401
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 2
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
TGTA-1 GTCT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7296839|gb|AE003606.1|AE003606 Drosophila melanogaster genomic scaffold 142000013386043 section 7 of 8, complete sequence
Position Repeat Coverage Repeat
37579 GTCA * 5 18/20 GTCA GTCA GTCA CTCA TTCA
80605 TTAT * 5 19/20 TTAT TTAT TTAA TTAT TTAT
91137 TATG * 11 40/44 TATG TATG TGTG TATG TGTG TATG TATG TATG TATG TATG CATA
102670 ACAT * 5 18/20 ACAT ACAT ACAT ACAT ACTC
229422 TGTA * 5 19/20 TGTA TGTA TGTA TATA TGTA
267997 ATAC * 5 18/20 ATAC ATAT ATAC ATAT ATAC
268021 ATAC * 5 18/20 ATAC ATAT ATAC ATAT ATAC
-----------------------------------------------------------------------------
Total sequence length......................... 300275
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 7
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATAC-2 ACAT-1 TATG-1 TTAT-1 TGTA-1 GTCA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7296808|gb|AE003605.1|AE003605 Drosophila melanogaster genomic scaffold 142000013386043 section 6 of 8, complete sequence
Position Repeat Coverage Repeat
17954 TATG * 5 18/20 TATG TATG TATG TACA TATG
26953 TAAG * 7 26/28 TAAG TAAG TAAG TAAG TAAG TAAG ACAG
34902 CATA * 5 19/20 CATA CATA CATA CCTA CATA
181900 TACA * 5 19/20 TACA TACA TACA TACA TAGA
206724 TATT * 5 18/20 TATT TATT TATT TATT TAAG
221241 TCAT * 5 19/20 TCAT TCAT TGAT TCAT TCAT
227206 TGTA * 5 18/20 TGTA TATA TGTA TTTA TGTA
251519 TACA * 5 18/20 TACA TGCA TGCA TACA TACA
259850 TAAA * 5 18/20 TAAA TTAA TAAA TAAA TATA
-----------------------------------------------------------------------------
Total sequence length......................... 274591
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 9
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
TAAA-1 TAAG-1 TATT-1 TATG-1 TACA-2 TGTA-1 TCAT-1 CATA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7296793|gb|AE003604.1|AE003604 Drosophila melanogaster genomic scaffold 142000013386043 section 5 of 8, complete sequence
Position Repeat Coverage Repeat
3016 TGTT * 5 18/20 TGTT TGTT GGTT TGTT GGTT
32702 TGGG * 5 18/20 TGGG TGGT TGGG TGGT TGGG
43724 CAGT * 5 19/20 CAGT CAGT CAGT CAGT CAGG
65562 TAAA * 5 18/20 TAAA TAAA TTAA AAAA TAAA
105566 CCGT * 7 27/28 CCGT CCGT CCGT CCGT CCGT CTGT CCGT
145290 TCCG * 5 18/20 TCCG TCCG TCCG TCTG TTCG
169162 GTCC * 6 22/24 GTCC GTCC TTCT GTCC GTCC GTCC
179089 ACTG * 6 22/24 ACTG ACTG ACTG ACTG ACCG AATG
182263 ATGG * 9 34/36 ATGG ATGG ATGG ATGG ATGG ATGG ATGA ATGG ATGA
185033 GTCA * 5 18/20 GTCA GTGA GTCA ATCA GTCA
203880 TAAA * 5 18/20 TAAA TAAA TAAC TAAA TAAC
243413 CCAG * 5 18/20 CCAG TCAG CCAG TCAG CCAG
244422 GATC * 5 19/20 GATC GCTC GATC GATC GATC
264463 CGAT * 6 22/24 CGAT CGAT CGAT CGAT GGAT CGGT
270211 GGCT * 5 18/20 GGCT GACT GGCT GGCT GGCC
277022 CGTC * 5 18/20 CGTC CGTC TGTC CGTC TGTC
279434 TATG * 5 19/20 TATG TATG TATG TATG TGTG
280857 TGTT * 5 19/20 TGTT TGTT TGTT TGTT TGCT
283337 TGTT * 6 22/24 TGTT TGCT TGTT TGTT TGTT TTTT
285640 TACA * 5 19/20 TACA TACG TACA TACA TACA
300447 TCCG * 5 18/20 TCCG TCCG TCTG TCTG TCCG
-----------------------------------------------------------------------------
Total sequence length......................... 302700
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 21
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATGG-1 ACTG-1 TAAA-2 TATG-1 TACA-1 TGTT-3 TGGG-1 TCCG-2
GATC-1 GTCA-1 GTCC-1 GGCT-1 CAGT-1 CGAT-1 CGTC-1 CCAG-1
CCGT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7296751|gb|AE003603.1|AE003603 Drosophila melanogaster genomic scaffold 142000013386043 section 4 of 8, complete sequence
Position Repeat Coverage Repeat
7086 ACAT * 5 18/20 ACAT GCAT ACAT GCAT ACAT
48248 CATA * 5 18/20 CATA CATA CATA CATA TGTA
133222 TCCA * 5 19/20 TCCA TCCA TCCA TCCA TCTA
191864 TCCA * 5 18/20 TCCA TCCA TCCA CCCA TCGA
220860 ATTT * 5 18/20 ATTT ATTT ACTT TTTT ATTT
252212 AGTC * 6 22/24 AGTC AGCC AGCC AGTC AGTC AGTC
268318 ATCT * 5 20/20 ATCT ATCT ATCT ATCT ATCT
289811 AAAT * 6 22/24 AAAT AAAT AAAT AAAT ATTT AAAT
289837 ATAA * 8 29/32 ATAA AAAA ATAA GTAA ATAA ATAA ATAA AAAA
289881 TAAA * 11 41/44 TAAA TAAA TAAA TAAA TAAG TAAA TAAA TGAA CAAA TAAA TAAA
289942 AAAT * 5 19/20 AAAT AATT AAAT AAAT AAAT
289984 AATA * 5 20/20 AATA AATA AATA AATA AATA
290175 ATAA * 6 22/24 ATAA ATTA ATAA ATAA ATAA ATAT
290234 AAAT * 34 123/136 AAAT AAAT AAAT AAAT AAAT AAAT AAAT GAAT AAAT AAAT AAAT AAAT AAAT AAAT AAAT AAAT TAAT AAAT AAAT AAAT AAAT AAAT AAAT AAAT AAAT AAAT AAAT AAAT TAAT TAAA TAAA TAAA TAAC TAAA
290398 AATA * 40 146/160 AATA AATA AATA AATA AATA AATA AATA AATA AATA AATA AATA AATA AATA AATA AATA AATA AATA AATA AATA AATA AATA AATA AATA AATA AATA AATA AATA AATA AATA AGTA AATA AATA AATA AATA AATA AACT CAAA AAAA TTGG TTGT
-----------------------------------------------------------------------------
Total sequence length......................... 294507
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 15
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-3 AATA-2 ATAA-2 ATTT-1 ATCT-1 AGTC-1 ACAT-1 TAAA-1
TCCA-2 CATA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7296683|gb|AE003602.1|AE003602 Drosophila melanogaster genomic scaffold 142000013386043 section 3 of 8, complete sequence
Position Repeat Coverage Repeat
12189 AAAC * 5 20/20 AAAC AAAC AAAC AAAC AAAC
42339 TAAT * 5 18/20 TAAT TTAT TAAA TAAT TAAT
90886 ATCT * 5 18/20 ATCT ATCT ACCC ATCT ATCT
90949 TGTA * 5 19/20 TGTA TCTA TGTA TGTA TGTA
104972 TATG * 5 19/20 TATG TATG TATG TATG TATA
192303 GATG * 5 18/20 GATG GATA GATT GATG GATG
212311 TATT * 5 19/20 TATT TATT TATT TATT TGTT
216979 CTGC * 5 18/20 CTGC CTGC CTGC TAGC CTGC
234305 ACCA * 5 18/20 ACCA ACCA ACCA GTCA ACCA
258053 ACAA * 5 18/20 ACAA ACAA ACAA ACAA GCAC
283843 GCAA * 5 18/20 GCAA GCAA ACAA ACAA GCAA
285443 CAGA * 5 19/20 CAGA CAGA CAGC CAGA CAGA
-----------------------------------------------------------------------------
Total sequence length......................... 297266
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 12
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAC-1 ATCT-1 ACAA-1 ACCA-1 TAAT-1 TATT-1 TATG-1 TGTA-1
GATG-1 GCAA-1 CAGA-1 CTGC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7296642|gb|AE003601.1|AE003601 Drosophila melanogaster genomic scaffold 142000013386043 section 2 of 8, complete sequence
Position Repeat Coverage Repeat
26420 TTAT * 5 18/20 TTAT TGTT TTAT TTAT TTAT
28962 AGAC * 5 18/20 AGAC AGAC AGAC CGGC AGAC
48212 TCTG * 6 22/24 TCTG TCTG TCTG TCTG TCAG TCAG
64838 TCAT * 5 18/20 TCAT TTAT TCAT TTAT TCAT
79960 GAAT * 5 18/20 GAAT GATG GAAT GAAT GAAT
89740 GCTG * 10 36/40 GCTG GCTG GATG GCTG GCTG GATG GCTG GCTG GATG ACTG
149250 TAAA * 6 22/24 TAAA TAAA TAAA TAAA TAAA ATAA
149274 AATA * 5 18/20 AATA AATA AATA AATA ACTT
153714 TCCA * 5 18/20 TCCA TCCA TCCA TTTA TCCA
178844 ACAT * 5 18/20 ACAT ACAT ACAT ATAC ACAT
200795 TATG * 5 18/20 TATG TATG TATG TATC TATC
225737 TTAA * 5 19/20 TTAA TTAA TTAA TTAA TGAA
229632 TATG * 5 19/20 TATG TATA TATG TATG TATG
231544 GTAT * 5 18/20 GTAT GTAT GTAT GTTT GTGT
261147 GTAT * 5 18/20 GTAT GTGT GTAT ATAT GTAT
280331 AACC * 5 18/20 AACC TAAC AACC AACC AACC
280538 TTTA * 5 18/20 TTTA TTTG TTTA TTTA CTTA
296100 ATAC * 5 18/20 ATAC ATAC ATAC ATAA ATAT
296128 ATAC * 5 18/20 ATAC ATAC ATAC ATAT ACAC
-----------------------------------------------------------------------------
Total sequence length......................... 303626
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 19
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AATA-1 AACC-1 ATAC-2 AGAC-1 ACAT-1 TAAA-1 TATG-2 TTAA-1
TTAT-1 TTTA-1 TCAT-1 TCTG-1 TCCA-1 GAAT-1 GTAT-2 GCTG-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7296607|gb|AE003600.1|AE003600 Drosophila melanogaster genomic scaffold 142000013386043 section 1 of 8, complete sequence
Position Repeat Coverage Repeat
2529 AATA * 5 19/20 AATA AATA AATA AATA AACA
4607 TGAA * 5 18/20 TGAA TGAA TGAA TGAA TTGA
7246 AATA * 6 24/24 AATA AATA AATA AATA AATA AATA
11206 TCAG * 6 22/24 TCAG TCAG TCTG TTAG TCAG TCAG
39338 ATAA * 5 18/20 ATAA ATAA ATAA TTAA ATAC
53017 CTGG * 5 19/20 CTGG CTGG CTGG CTAG CTGG
55515 CTTT * 6 23/24 CTTT CTTT CTTT CTTT CTGT CTTT
55816 TATT * 5 19/20 TATT TATT TATA TATT TATT
83191 TAGA * 6 22/24 TAGA TAGA TAGC TAGA TTGA TAGA
95017 ATTA * 5 19/20 ATTA ATTA ATTA ATTT ATTA
97101 GATA * 5 18/20 GATA GACA GATA GGTA GATA
163560 AAAT * 5 18/20 AAAT AAAT TAAT AAAT AAAA
211952 TTTA * 5 19/20 TTTA TATA TTTA TTTA TTTA
216245 GACG * 5 18/20 GACG GGCG GACG GGCG GACG
229189 TATT * 5 18/20 TATT TGTT TATT TGTT TATT
235830 ATGT * 5 19/20 ATGT ATGT ATGT ACGT ATGT
281476 ACAT * 6 22/24 ACAT ACAA ACAT ACAT ACAT ATAT
-----------------------------------------------------------------------------
Total sequence length......................... 291545
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 17
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 AATA-2 ATAA-1 ATTA-1 ATGT-1 ACAT-1 TATT-2 TAGA-1
TTTA-1 TGAA-1 TCAG-1 GATA-1 GACG-1 CTTT-1 CTGG-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7316097|gb|AE002699.1|AE002699 Drosophila melanogaster genomic scaffold 142000013386040, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 0
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7298913|gb|AE003675.1|AE003675 Drosophila melanogaster genomic scaffold 142000013386040 section 5 of 5, complete sequence
Position Repeat Coverage Repeat
19735 CATA * 5 18/20 CATA CATA TGTA CATA CATA
34507 TCAA * 5 18/20 TCAA TCAA TCAA TCAA TTCA
49859 CCAC * 5 18/20 CCAC CCAC CAAC TCAC CCAC
50400 AAAT * 6 22/24 AAAT AAAT AAAT AAAA AAAT AAAA
65208 AATA * 5 18/20 AATA AATA AATA AATA AACT
70153 TGTA * 6 22/24 TGTA TATA TGTA TGTA TTTA TGTA
78670 TATG * 5 18/20 TATG TACA TATG TATG TATG
90560 TATT * 7 26/28 TATT TATA TATA TATT TATT TATT TATT
-----------------------------------------------------------------------------
Total sequence length......................... 145786
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 8
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 AATA-1 TATT-1 TATG-1 TGTA-1 TCAA-1 CATA-1 CCAC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7298877|gb|AE003674.1|AE003674 Drosophila melanogaster genomic scaffold 142000013386040 section 4 of 5, complete sequence
Position Repeat Coverage Repeat
33513 GTAG * 5 18/20 GTAG GTAT ATAG GTAG GTAG
113185 AAAT * 6 22/24 AAAT AAAT AAAT AAAA AAAT AATT
156790 TCTG * 5 18/20 TCTG TCTG TCTG TCTG TCCC
162566 TTGT * 5 18/20 TTGT CCGT TTGT TTGT TTGT
164561 ATTT * 5 19/20 ATTT ATAT ATTT ATTT ATTT
165190 CAAC * 5 18/20 CAAC AAAC CAAC CAAC AAAC
167500 ACCA * 5 18/20 ACCA ACCG ACCA ACCA TCCA
168989 TTGT * 5 19/20 TTGT TTGC TTGT TTGT TTGT
247951 AAAT * 5 19/20 AAAT AAAT AAAT AAAC AAAT
249151 TTAT * 6 22/24 TTAT TCAT TTAT TTAT TTAT TTAA
-----------------------------------------------------------------------------
Total sequence length......................... 298028
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 10
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-2 ATTT-1 ACCA-1 TTAT-1 TTGT-2 TCTG-1 GTAG-1 CAAC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7298860|gb|AE003673.1|AE003673 Drosophila melanogaster genomic scaffold 142000013386040 section 3 of 5, complete sequence
Position Repeat Coverage Repeat
9028 CTTC * 5 18/20 CTTC CTTC CCTC CTTC CTCC
9657 TATG * 5 19/20 TATG TATG TATG TATG TATA
39069 TATG * 5 19/20 TATG TATG TATG TATG TTTG
40555 AAAT * 5 19/20 AAAT AAAT ATAT AAAT AAAT
43829 AGTA * 5 19/20 AGTA AGTG AGTA AGTA AGTA
53818 ACGG * 6 22/24 ACGG ACAG ACGG ACGG ACGG ACAG
66897 TCTT * 5 18/20 TCTT TCTT TCAT TCTT TCTG
86087 AAAT * 5 18/20 AAAT AAAT AAAT AAAT GAGT
95322 GACA * 7 26/28 GACA TTCA GACA GACA GACA GACA GACA
95977 CTGG * 5 18/20 CTGG CTGG CTGG CTGG CCTG
104312 TGGT * 5 18/20 TGGT AGGT TGGT TGGG TGGT
113239 CGAT * 5 18/20 CGAT CCAT CGAT CGCT CGAT
115356 ACAT * 5 18/20 ACAT ACAT ATAT ACAT AAAT
124641 CGGA * 6 23/24 CGGA CGGA CGAA CGGA CGGA CGGA
152496 TTAT * 5 18/20 TTAT TTAA TTAT TTTT TTAT
165050 ATAA * 5 18/20 ATAA ATAA ATAA ATAT TTAA
170647 TATT * 6 23/24 TATT TATT TATT TATT TATT TCTT
187722 GGAC * 5 18/20 GGAC AGAC GGAC GGAC GGGC
231026 CCAG * 5 18/20 CCAG CAAG GCAG CCAG CCAG
241151 ACAA * 5 19/20 ACAA ACAA ACAA ACAA ACCA
280131 TTAA * 5 19/20 TTAA TAAA TTAA TTAA TTAA
299498 TGAT * 5 18/20 TGAT TGAT TGAG TGAT TAAT
-----------------------------------------------------------------------------
Total sequence length......................... 309357
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 22
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-2 ATAA-1 AGTA-1 ACAA-1 ACAT-1 ACGG-1 TATT-1 TATG-2
TTAA-1 TTAT-1 TGAT-1 TGGT-1 TCTT-1 GACA-1 GGAC-1 CTTC-1
CTGG-1 CGAT-1 CGGA-1 CCAG-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7298812|gb|AE003672.1|AE003672 Drosophila melanogaster genomic scaffold 142000013386040 section 2 of 5, complete sequence
Position Repeat Coverage Repeat
243 AGTA * 6 22/24 AGTA AGTA AGTA AATC AGTA AGTA
2723 AATA * 5 18/20 AATA AAGA AATA AATC AATA
32872 GGAC * 5 18/20 GGAC GGAC GGAC GGAC GGCG
37487 GGAC * 5 18/20 GGAC GGAC GGAC GGAC GGCG
91092 TAGT * 5 19/20 TAGT TAGT TAGT GAGT TAGT
92269 TCTA * 5 18/20 TCTA TCTA TCTA TCTA TCAC
127973 ACTG * 6 22/24 ACTG ACTG GCTG ACTG ACTG CCTG
128003 TGAC * 6 23/24 TGAC TGAC TGAC TGAC TAAC TGAC
152669 TCAG * 6 22/24 TCAG TTAG TCAG TCAG TCAT TCAG
152694 CAGT * 7 26/28 CAGT CAGT CAGT CAGT CAGT GAGG CAGT
188938 TATG * 5 18/20 TATG TATA TATG TATG TATA
189227 TGAG * 5 18/20 TGAG TGAG TGAG TGAG TGGT
198828 TAAA * 5 19/20 TAAA TACA TAAA TAAA TAAA
200961 ATAA * 6 22/24 ATAA ATAA ATAA ATAA AAAT ATAA
204118 CATA * 5 18/20 CATA CTCA CATA CATA CATA
297774 ATGT * 6 22/24 ATGT ATGT ACGT ACGT ATGT ATGT
298427 ATAC * 5 18/20 ATAC GTAC ATAC ATAC ATAT
298649 TATG * 5 18/20 TATG TAAA TATG TATG TATG
-----------------------------------------------------------------------------
Total sequence length......................... 301601
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 18
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AATA-1 ATAA-1 ATAC-1 ATGT-1 AGTA-1 ACTG-1 TAAA-1 TATG-2
TAGT-1 TGAG-1 TGAC-1 TCAG-1 TCTA-1 GGAC-2 CATA-1 CAGT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7298787|gb|AE003671.1|AE003671 Drosophila melanogaster genomic scaffold 142000013386040 section 1 of 5, complete sequence
Position Repeat Coverage Repeat
26488 ACTC * 6 22/24 ACTC ACTC ACTC ATTC ACTC GCTC
32671 CTAT * 5 18/20 CTAT CTAT CTAT GTAT ATAT
64535 GGTT * 5 18/20 GGTT GGTT TGTT AGTT GGTT
104967 ATTA * 5 18/20 ATTA ATTA ATTA AGTG ATTA
130524 GGCT * 8 30/32 GGCT GGCT GGCT GGCT GGCT GGCT GGCT GGAA
206527 TATG * 6 22/24 TATG TATG TATG TATG AATG TCTG
237927 CGAC * 5 18/20 CGAC CAAC CGAC CCAC CGAC
-----------------------------------------------------------------------------
Total sequence length......................... 309023
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 7
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATTA-1 ACTC-1 TATG-1 GGTT-1 GGCT-1 CTAT-1 CGAC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7316093|gb|AE002708.1|AE002708 Drosophila melanogaster genomic scaffold 142000013386035, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 0
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7302106|gb|AE003780.1|AE003780 Drosophila melanogaster genomic scaffold 142000013386035 section 105 of 105, complete sequence
Position Repeat Coverage Repeat
28914 TTGT * 5 18/20 TTGT TTGT TTGT TTTG TTGT
36937 GACT * 5 18/20 GACT GGCT GCCT GACT GACT
77967 CTTC * 5 18/20 CTTC TTTC CTTC CTTC CTCC
79588 ATAC * 5 20/20 ATAC ATAC ATAC ATAC ATAC
147744 TAAT * 5 18/20 TAAT TAAT AAAT TATT TAAT
164434 ATAC * 5 19/20 ATAC ATAC ATAC ATAC ATAT
174372 AATT * 5 18/20 AATT AATT AATT AATT AAAA
183821 ATTA * 5 18/20 ATTA ATTA TTTA ATTA ATTG
-----------------------------------------------------------------------------
Total sequence length......................... 249284
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 8
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AATT-1 ATAC-2 ATTA-1 TAAT-1 TTGT-1 GACT-1 CTTC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7302062|gb|AE003779.1|AE003779 Drosophila melanogaster genomic scaffold 142000013386035 section 104 of 105, complete sequence
Position Repeat Coverage Repeat
7533 TTGA * 5 18/20 TTGA TTGA TTGA TTAA TTGG
9573 CGGA * 5 18/20 CGGA CAGA CGAA CGGA CGGA
35278 CCAA * 5 18/20 CCAA CCCA CCAA CCGA CCAA
41744 ACCC * 5 18/20 ACCC ACTC ACCC ACTC ACCC
167034 GTAA * 5 19/20 GTAA GTAA GTAA GTAA GTGA
-----------------------------------------------------------------------------
Total sequence length......................... 232064
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 5
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ACCC-1 TTGA-1 GTAA-1 CGGA-1 CCAA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7302043|gb|AE003778.1|AE003778 Drosophila melanogaster genomic scaffold 142000013386035 section 103 of 105, complete sequence
Position Repeat Coverage Repeat
11355 CAAA * 5 18/20 CAAA CAAA CAAA CAAA AACA
60179 TTGT * 5 19/20 TTGT TTGT TTGT TTGT TTTT
78952 TATG * 6 22/24 TATG TATG TATA TATG TCTG TATG
114286 AACT * 5 18/20 AACT GACT AACT AACT GACT
166848 AGTC * 8 29/32 AGTC AGTC AGTC AGTC AGTT AGTT AGTC AGTT
183440 CATC * 5 18/20 CATC CAAC CATC CAGC CATC
183460 CAGC * 5 18/20 CAGC CATC CAGC CATC CAGC
183480 CATC * 5 18/20 CATC CAGC CATC CAGC CATC
194037 TTCA * 5 18/20 TTCA TTCA TTCA TTTA CTCA
198616 GTTT * 5 18/20 GTTT GTTT GTTG ATTT GTTT
203257 TGGC * 5 18/20 TGGC TAGC TTGC TGGC TGGC
-----------------------------------------------------------------------------
Total sequence length......................... 225108
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 11
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AACT-1 AGTC-1 TATG-1 TTGT-1 TTCA-1 TGGC-1 GTTT-1 CAAA-1
CATC-2 CAGC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7302015|gb|AE003777.1|AE003777 Drosophila melanogaster genomic scaffold 142000013386035 section 102 of 105, complete sequence
Position Repeat Coverage Repeat
16985 CCAC * 5 18/20 CCAC CAAC TCAC CCAC CCAC
17781 ACAG * 8 29/32 ACAG ACAG ACAG ACAG ACAG ACAC ACAC ACAC
84449 ATCA * 5 20/20 ATCA ATCA ATCA ATCA ATCA
90062 TATG * 5 18/20 TATG TATG TACG TTTG TATG
90741 TGGA * 8 29/32 TGGA TGGA TGGT TGGA TGGT TGGA TGGA TGGC
96794 TAAC * 5 18/20 TAAC TAAC TGAC TAAC AAAC
127001 TATC * 5 18/20 TATC TATC TATC TATT TTTC
158920 CAGA * 10 36/40 CAGA CAGA CAGA CAGA CAGA CAGA CAGA TGGA CAGA TGGA
159775 AACA * 5 18/20 AACA AGCC AACA AACA AACA
183656 GATA * 6 22/24 GATA GATA GATA GACA GATA GATG
225507 AGTG * 5 19/20 AGTG AGTG AGGG AGTG AGTG
-----------------------------------------------------------------------------
Total sequence length......................... 232000
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 11
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AACA-1 ATCA-1 AGTG-1 ACAG-1 TAAC-1 TATG-1 TATC-1 TGGA-1
GATA-1 CAGA-1 CCAC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301994|gb|AE003776.1|AE003776 Drosophila melanogaster genomic scaffold 142000013386035 section 101 of 105, complete sequence
Position Repeat Coverage Repeat
139122 GTCC * 5 18/20 GTCC GTAT GTCC GTCC GTCC
-----------------------------------------------------------------------------
Total sequence length......................... 225879
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 1
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
GTCC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301969|gb|AE003775.1|AE003775 Drosophila melanogaster genomic scaffold 142000013386035 section 100 of 105, complete sequence
Position Repeat Coverage Repeat
47489 CAAA * 5 18/20 CAAA CAAA AAAA AAAA CAAA
57360 AAAT * 5 18/20 AAAT AAAT AAAT AAAT CATT
65265 AGGA * 5 18/20 AGGA AGGA AGGA AGGA AAGC
65506 ATGG * 8 30/32 ATGG ATGG ATGG ATGG GTGG ATGG ATGG AAGG
66578 TCAG * 5 18/20 TCAG TCAG TCAG TTTG TCAG
90038 GAAT * 5 18/20 GAAT GAAT GGAT GAAT GGAT
97199 GCCA * 10 36/40 GCCA GCCA GCCA GCCA GCTA GTCA GCCA GCCA GCTA GTCA
110655 GTCC * 6 22/24 GTCC ATCC GTCC ATCC GTCC GTCC
141714 GATG * 6 22/24 GATG GATG GATG GATG GATG GTCG
150475 CCTC * 6 22/24 CCTC CCTC CCTC CCTT CCTC CGTC
151478 AACC * 5 19/20 AACC AACC AACC TACC AACC
158896 TATG * 5 18/20 TATG TATG TATG TATG TAGC
232137 AGAT * 9 33/36 AGAT AGAT AGAT AGAA AGAT AGAT AGCT AGAT CGAT
-----------------------------------------------------------------------------
Total sequence length......................... 236109
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 13
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 AACC-1 ATGG-1 AGAT-1 AGGA-1 TATG-1 TCAG-1 GAAT-1
GATG-1 GTCC-1 GCCA-1 CAAA-1 CCTC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301938|gb|AE003774.1|AE003774 Drosophila melanogaster genomic scaffold 142000013386035 section 99 of 105, complete sequence
Position Repeat Coverage Repeat
20577 TTTG * 5 18/20 TTTG TTTG TTTG TTTG CTCG
65331 TTAG * 6 22/24 TTAG TTAG TTAG TTAG TTAG TTTT
69309 ACAA * 5 20/20 ACAA ACAA ACAA ACAA ACAA
86879 TTTG * 5 18/20 TTTG TTTG GTTG TTTG TTTT
101426 AAAG * 5 18/20 AAAG AAAG AAAA TAAG AAAG
116677 ATAA * 5 18/20 ATAA ATAA ATAA ATAA TAAA
118226 CACC * 6 22/24 CACC CACC CACT CACC CACT CACC
127896 CAGT * 5 18/20 CAGT CAGT CAGT CAGT CGGA
139232 CTGA * 11 40/44 CTGA CTCA CTGA CTGA CTAA CTGA CTGA ATGA CTGA CTGA CTGG
-----------------------------------------------------------------------------
Total sequence length......................... 239003
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 9
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAG-1 ATAA-1 ACAA-1 TTAG-1 TTTG-2 CAGT-1 CACC-1 CTGA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301915|gb|AE003773.1|AE003773 Drosophila melanogaster genomic scaffold 142000013386035 section 98 of 105, complete sequence
Position Repeat Coverage Repeat
50398 CATA * 5 18/20 CATA TATA CATA CATA TATA
65845 ATAC * 5 18/20 ATAC ATAC ATAC ACTC ATAC
71292 ATAC * 5 18/20 ATAC ATAC ATAA TTAC ATAC
87975 TTTA * 5 18/20 TTTA TTTA TTTA TTTA TTGC
88774 AGTG * 5 18/20 AGTG AGCG AGTG AGTG AGGG
93054 TTTA * 5 18/20 TTTA TTTA CTTA TTTA TTAA
122926 ATGA * 8 29/32 ATGA ATGA ATGA ATGA ATGA GTGA GTGA GTGA
134954 CTGT * 5 19/20 CTGT CTAT CTGT CTGT CTGT
144863 TTTA * 5 19/20 TTTA TTTA TTTA TTTA TTTC
152946 TGGC * 5 18/20 TGGC TGAC TGGC TGAC TGGC
177740 CAAA * 5 18/20 CAAA CAAA AACA CAAA CAAA
-----------------------------------------------------------------------------
Total sequence length......................... 226905
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 11
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATAC-2 ATGA-1 AGTG-1 TTTA-3 TGGC-1 CAAA-1 CATA-1 CTGT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301871|gb|AE003772.1|AE003772 Drosophila melanogaster genomic scaffold 142000013386035 section 97 of 105, complete sequence
Position Repeat Coverage Repeat
2540 GCTG * 6 22/24 GCTG GATG GGTG GCTG GCTG GCTG
14134 AGCC * 5 18/20 AGCC GGCC AGCC AGCC GGCC
27540 TAGA * 6 22/24 TAGA TAGA AAGA TAGA TAGA TGGA
36302 ATAC * 5 18/20 ATAC ATAC ATAC ATTC ATAT
100252 GTCC * 5 18/20 GTCC GTCT GTCC GTCC GTCT
119980 TATG * 5 18/20 TATG TGTG TATG TCTG TATG
147350 AATA * 5 19/20 AATA AATA AATA AATA AACA
204590 AATA * 5 18/20 AATA TATA AACA AATA AATA
214763 TGAC * 6 22/24 TGAC TGAT TGAC CGAC TGAC TGAC
220403 TGTA * 5 18/20 TGTA AGTA TGTA AGTA TGTA
-----------------------------------------------------------------------------
Total sequence length......................... 228448
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 10
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AATA-2 ATAC-1 AGCC-1 TATG-1 TAGA-1 TGAC-1 TGTA-1 GTCC-1
GCTG-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301817|gb|AE003771.1|AE003771 Drosophila melanogaster genomic scaffold 142000013386035 section 96 of 105, complete sequence
Position Repeat Coverage Repeat
15710 GTGC * 7 26/28 GTGC GTGC GTGC GTGT GTGC GTGC GTGT
24115 TAAA * 5 18/20 TAAA CAAA TAAG TAAA TAAA
87566 GCTA * 5 18/20 GCTA GCCA GCTA GCCA GCTA
97276 TATG * 5 18/20 TATG TATG TATG TATA TACG
104350 TAGC * 5 18/20 TAGC CAGC TAGC AAGC TAGC
150717 GCCT * 5 19/20 GCCT GCCT GCCT GCCT GACT
210801 GAAT * 5 19/20 GAAT GAAT GAAT AAAT GAAT
-----------------------------------------------------------------------------
Total sequence length......................... 235127
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 7
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
TAAA-1 TATG-1 TAGC-1 GAAT-1 GTGC-1 GCTA-1 GCCT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301790|gb|AE003770.1|AE003770 Drosophila melanogaster genomic scaffold 142000013386035 section 95 of 105, complete sequence
Position Repeat Coverage Repeat
3887 AGCC * 5 19/20 AGCC AGCC AGCC AGCC AGCG
8354 TTCA * 8 30/32 TTCA TTCA TTCA TTCA TTCA TTCA ATCG TTCA
21462 AACA * 11 41/44 AACA AACA AACA AACA AACA AACA GACA AACG AACA AACA AAAA
26699 TTGA * 5 19/20 TTGA TTGA TTTA TTGA TTGA
43331 TGAC * 5 18/20 TGAC TAAA TGAC TGAC TGAC
67116 ATAG * 8 30/32 ATAG ATAG ATAG ATAG ATAG ATAG ATAG ATCT
67355 TGGT * 6 22/24 TGGT TGGT TGGT TGGT TGGA TGTT
88146 AACC * 6 23/24 AACC AACC AACC AACC AACC AACA
93389 TGGC * 5 19/20 TGGC TGGC TGGG TGGC TGGC
95671 TTTG * 5 18/20 TTTG TTTG TTTA TTTG CTTG
122040 ACAT * 5 18/20 ACAT ACAT ACAT ACAC AAAT
136889 TCAG * 7 26/28 TCAG TCAG CCAG TCAT TCAG TCAG TCAG
149980 TTCA * 5 18/20 TTCA TTCA CACA TTCA TTCA
190473 TGTT * 6 22/24 TGTT TGTT TGTT TGTT TGTT TAAT
196815 ACTC * 6 22/24 ACTC ACTC ACTC ACTT ACTC AGTC
199547 CCTG * 6 23/24 CCTG CCTG CCTG CCTG CCTG CCCG
210320 CAGT * 7 26/28 CAGT CAGT CACT TAGT CAGT CAGT CAGT
-----------------------------------------------------------------------------
Total sequence length......................... 224100
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 17
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AACA-1 AACC-1 ATAG-1 AGCC-1 ACAT-1 ACTC-1 TTTG-1 TTGA-1
TTCA-2 TGAC-1 TGTT-1 TGGT-1 TGGC-1 TCAG-1 CAGT-1 CCTG-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301774|gb|AE003769.1|AE003769 Drosophila melanogaster genomic scaffold 142000013386035 section 94 of 105, complete sequence
Position Repeat Coverage Repeat
17460 TTTA * 5 18/20 TTTA TTTA TTTA TTTA CTTT
22557 CATT * 5 18/20 CATT CATT GATT CATT CATG
26821 TAGA * 5 18/20 TAGA TAGA TGGA TAGA TCGA
49184 TGGG * 5 18/20 TGGG TGGG TGGC TGTG TGGG
50474 ACTG * 16 58/64 ACTG ACTG ACTG ACTG ACTG ACTG ATTG ACTA ACTG ACTG ACTG ACTG ACTG ACTG GCTC ATAG
59700 TGAC * 6 22/24 TGAC TGAC TGGC TGAC TGGC TGAC
65498 TGTC * 5 19/20 TGTC TGCC TGTC TGTC TGTC
99935 GAGT * 5 18/20 GAGT GAGT GAGC AAGT GAGT
125409 GGCA * 5 20/20 GGCA GGCA GGCA GGCA GGCA
139405 GTCT * 5 19/20 GTCT GTCT GTCT GTCT GGCT
210763 AAAG * 5 19/20 AAAG AAAG AAAG AAAG AAAA
219557 AATT * 5 18/20 AATT AATT AATT AATT AAAA
219938 TAGA * 5 18/20 TAGA TACA TAGA TACA TAGA
233086 ACTG * 5 18/20 ACTG ACTG ACTG ACGA ACTG
-----------------------------------------------------------------------------
Total sequence length......................... 234161
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 14
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAG-1 AATT-1 ACTG-2 TAGA-2 TTTA-1 TGAC-1 TGTC-1 TGGG-1
GAGT-1 GTCT-1 GGCA-1 CATT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301730|gb|AE003768.1|AE003768 Drosophila melanogaster genomic scaffold 142000013386035 section 93 of 105, complete sequence
Position Repeat Coverage Repeat
50312 AGCC * 6 23/24 AGCC AGCC AGTC AGCC AGCC AGCC
61930 ATCT * 5 18/20 ATCT ATCT ATCT ATCC ATCC
61952 CATC * 5 18/20 CATC CATC CATG CATC CATA
74880 AACC * 8 30/32 AACC AACA AACC AACC AACC AACC AATC AACC
100437 CAAT * 6 22/24 CAAT CAAT CAAT CAAT CAAC CAAC
100461 CAAC * 5 20/20 CAAC CAAC CAAC CAAC CAAC
142777 TGTT * 5 19/20 TGTT TGTT TGTT TGTT TTTT
143595 CTGA * 6 22/24 CTGA CTGA CTGA CTGA TTGA TTGA
167114 TATG * 5 18/20 TATG TACA TATG TATG TATG
177171 GTAT * 5 18/20 GTAT CTAT GTAT CTAT GTAT
181942 GTAT * 5 18/20 GTAT GTAT GTAT ATAT GTTT
224697 ATTT * 5 18/20 ATTT AATT ATTA ATTT ATTT
-----------------------------------------------------------------------------
Total sequence length......................... 242815
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 12
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AACC-1 ATTT-1 ATCT-1 AGCC-1 TATG-1 TGTT-1 GTAT-2 CAAT-1
CAAC-1 CATC-1 CTGA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301701|gb|AE003767.1|AE003767 Drosophila melanogaster genomic scaffold 142000013386035 section 92 of 105, complete sequence
Position Repeat Coverage Repeat
23719 CAGC * 5 19/20 CAGC CAGC AAGC CAGC CAGC
41261 GGAT * 7 26/28 GGAT GGAT GGAT GGAT GGAT GGAT GGGG
44051 TCTG * 5 19/20 TCTG TCTA TCTG TCTG TCTG
48599 GGAC * 5 19/20 GGAC GAAC GGAC GGAC GGAC
92301 GAAC * 5 18/20 GAAC TAAC GAAC GAAC GAAT
93059 TGGC * 5 18/20 TGGC TGGC TGGC TGGG TAGC
118766 GTGA * 5 19/20 GTGA GTGA GTGA GTGA GTGG
132314 TTAT * 5 18/20 TTAT TTAT TTCT TTAT TTTT
134939 CAAA * 5 19/20 CAAA CAAA CAAA CAAA CAAT
140760 TTTG * 7 26/28 TTTG TTTG CTTG TTTG TTTG TTTG TTTA
154086 ACTG * 5 18/20 ACTG ACAA ACTG ACTG ACTG
154110 ACTG * 6 22/24 ACTG ACTG ACTC ACTG ACTG AGTG
166972 TTGT * 7 27/28 TTGT TTGT TTGT TTGT TTGT TCGT TTGT
175577 CAAA * 6 23/24 CAAA CAAG CAAA CAAA CAAA CAAA
178704 CCTC * 6 22/24 CCTC CCTC GCTC CCTC GCTC CCTC
192428 CGTC * 8 29/32 CGTC CATC CGTC CGTC CATC CGTC CGTC CATC
202796 AGTT * 6 22/24 AGTT AGTT AGTT AGTT AGTT GGTC
208396 AACA * 5 18/20 AACA AACA AACA AACA ACAA
-----------------------------------------------------------------------------
Total sequence length......................... 225155
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 18
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AACA-1 AGTT-1 ACTG-2 TTAT-1 TTTG-1 TTGT-1 TGGC-1 TCTG-1
GAAC-1 GTGA-1 GGAT-1 GGAC-1 CAAA-2 CAGC-1 CGTC-1 CCTC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301683|gb|AE003766.1|AE003766 Drosophila melanogaster genomic scaffold 142000013386035 section 91 of 105, complete sequence
Position Repeat Coverage Repeat
9333 CCAA * 5 19/20 CCAA CCAG CCAA CCAA CCAA
18306 ATTT * 5 19/20 ATTT ATCT ATTT ATTT ATTT
35620 CAAC * 5 19/20 CAAC CAAC CAAC CAAC CTAC
86586 CAGG * 5 18/20 CAGG CAGG CAGG CAGC CAGT
86895 CTGG * 6 23/24 CTGG CTGG CTGG CTGG CTGG CTGA
93951 GACA * 5 18/20 GACA GACA GAGA GACA GACG
132205 CGGA * 5 19/20 CGGA CGGA CGGG CGGA CGGA
148260 TCCG * 7 26/28 TCCG TCCG TCCG TCCG TCCG TCCG TTCA
194987 GCTG * 5 18/20 GCTG GCTG GCTG GCTG GCGA
196025 AACA * 6 23/24 AACA AACA GACA AACA AACA AACA
203537 CCAT * 9 33/36 CCAT CCAT CCAT CCAT CCAT CCAT CCAT CCAA CGTT
221793 GTCT * 7 26/28 GTCT GTCT GTCT GCCT GTCT GACT GTCT
-----------------------------------------------------------------------------
Total sequence length......................... 225894
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 12
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AACA-1 ATTT-1 TCCG-1 GACA-1 GTCT-1 GCTG-1 CAAC-1 CAGG-1
CTGG-1 CGGA-1 CCAA-1 CCAT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301668|gb|AE003765.1|AE003765 Drosophila melanogaster genomic scaffold 142000013386035 section 90 of 105, complete sequence
Position Repeat Coverage Repeat
26026 CTAC * 5 20/20 CTAC CTAC CTAC CTAC CTAC
38465 GTGA * 5 18/20 GTGA ATGA GTGA GTGA GTGG
47576 AGTG * 6 22/24 AGTG AGTG AGTG AGCG AGTG TGTG
58645 TCTG * 7 26/28 TCTG TCTG TCTG TCTG TCTG TCTG TGGG
92787 AAGG * 5 18/20 AAGG AAGG AGGG ACGG AAGG
100035 ACAA * 5 19/20 ACAA ATAA ACAA ACAA ACAA
104694 AAAT * 5 18/20 AAAT AAAT AAAT GCAT AAAT
111969 GTTT * 5 18/20 GTTT GTTT GTTT GTTG GTCT
112174 GCTG * 5 18/20 GCTG GCTG GCTG GATG CCTG
122179 ACCG * 5 18/20 ACCG ACCC ACCA ACCG ACCG
126718 TCCG * 5 18/20 TCCG TCCG TCCG CCCA TCCG
134945 AAAC * 6 22/24 AAAC AAAC AAAT AAAC AAAC AAAT
150228 CAGA * 5 18/20 CAGA CAGA CAGA CGGA CATA
201823 CTGG * 5 18/20 CTGG CTGG TTAG CTGG CTGG
-----------------------------------------------------------------------------
Total sequence length......................... 239098
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 14
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 AAAC-1 AAGG-1 AGTG-1 ACAA-1 ACCG-1 TCTG-1 TCCG-1
GTTT-1 GTGA-1 GCTG-1 CAGA-1 CTAC-1 CTGG-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301658|gb|AE003764.1|AE003764 Drosophila melanogaster genomic scaffold 142000013386035 section 89 of 105, complete sequence
Position Repeat Coverage Repeat
4427 GAGT * 5 19/20 GAGT GAGT GAGT GAGT GAAT
17504 CCAT * 5 19/20 CCAT GCAT CCAT CCAT CCAT
21796 GCTG * 8 30/32 GCTG GCTC GCTC GCTG GCTG GCTG GCTG GCTG
24989 ACCC * 6 22/24 ACCC ACCC ACTC AACC ACCC ACCC
46057 ACAA * 5 18/20 ACAA ACAA GCAA ACAT ACAA
86214 CAGT * 6 22/24 CAGT CAGT GAGT CAGT GAGT CAGT
108207 TGAC * 5 18/20 TGAC TGAG TGAC TGAC TGGC
132420 TTGG * 5 18/20 TTGG TTGG TTGG TTGG TTAC
160188 TATG * 5 18/20 TATG TATG TATG TACG TATA
163928 TAAA * 5 18/20 TAAA TAAA TAAA TATA TTAA
197191 CCAC * 6 22/24 CCAC CCAC CCAC CCAG CCAC CCAA
203036 GCCA * 5 18/20 GCCA GTCA GCCA GTCA GCCA
203643 ACTA * 5 18/20 ACTA ACTA ACTA ACTA ATTT
214875 GGCT * 5 18/20 GGCT GGCT GGCC GGAT GGCT
230969 ACAT * 8 29/32 ACAT ACAT ACAT ACAC ACAT ACAT ACAT AGGT
-----------------------------------------------------------------------------
Total sequence length......................... 231691
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 15
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ACAA-1 ACAT-1 ACTA-1 ACCC-1 TAAA-1 TATG-1 TTGG-1 TGAC-1
GAGT-1 GGCT-1 GCTG-1 GCCA-1 CAGT-1 CCAT-1 CCAC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301637|gb|AE003763.1|AE003763 Drosophila melanogaster genomic scaffold 142000013386035 section 88 of 105, complete sequence
Position Repeat Coverage Repeat
73704 GGAT * 5 18/20 GGAT GGAT GAAT GAAT GGAT
90664 ATAC * 5 19/20 ATAC ATAC ATAC ATAC ATAT
96047 GTGC * 5 19/20 GTGC GTGC GTGT GTGC GTGC
133153 CACC * 5 18/20 CACC CACC CACC CACT CACA
151895 TGGG * 5 18/20 TGGG TGGT TGGG TGGC TGGG
152552 AACC * 5 18/20 AACC AACC AACC AACC AAAA
195244 AAAC * 5 18/20 AAAC AAAC AAAC AAAT AAAA
-----------------------------------------------------------------------------
Total sequence length......................... 203557
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 7
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAC-1 AACC-1 ATAC-1 TGGG-1 GTGC-1 GGAT-1 CACC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301615|gb|AE003762.1|AE003762 Drosophila melanogaster genomic scaffold 142000013386035 section 87 of 105, complete sequence
Position Repeat Coverage Repeat
7351 TATG * 5 20/20 TATG TATG TATG TATG TATG
60095 AGCC * 7 26/28 AGCC AGCC AGCC AGCC AGCC AGTC AGTC
71370 TCTG * 5 18/20 TCTG TCCG TCTG TCTG TTTG
87314 TTAT * 5 18/20 TTAT TTAT TTAT TTAT TCAA
98310 TGAC * 5 18/20 TGAC TGAC TGAC TGAT TTAC
101923 AGTG * 6 22/24 AGTG AGTG AACG AGTG AGTG AGTG
102856 AAAC * 6 22/24 AAAC AAAC AAAC AAAC AAGC AAAA
104258 CTGG * 8 30/32 CTGG CTGG CTGG CTGG CTGG CTGG CTGG CGAG
104290 TGGG * 5 18/20 TGGG TGGT TCGG TGGG TGGG
110415 TACA * 5 18/20 TACA TATA TACA TACA TGCA
112383 GTCT * 5 18/20 GTCT TTCG GTCT GTCT GTCT
117986 GAGT * 9 34/36 GAGT GAGT CAGT GAGT GAGT GAGC GAGT GAGT GAGT
123417 GGTG * 5 18/20 GGTG GTTG GGTG GTTG GGTG
129694 GCCA * 15 54/60 GCCA GCCA GCCA GCCA GCCA GCCA GCCA GCCA GCCA GCCA GCCA GCCA TCCA TCGC AACA
137791 AGTG * 5 18/20 AGTG AGTA AGTG AGTG AATG
142601 GGAT * 5 18/20 GGAT GGAC GGAT GGAT GGAA
153197 CCGA * 5 18/20 CCGA GCGA CCGA GCGA CCGA
173712 GGCA * 5 18/20 GGCA GGCA GGCC GGCA GACA
183315 TATG * 5 19/20 TATG TATG TATG TATG TATA
222764 TTGA * 10 36/40 TTGA TCGA TGGA TTGA TTGA TTGA TTGA TTGA TTGT TTGC
-----------------------------------------------------------------------------
Total sequence length......................... 230995
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 20
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAC-1 AGTG-2 AGCC-1 TATG-2 TACA-1 TTAT-1 TTGA-1 TGAC-1
TGGG-1 TCTG-1 GAGT-1 GTCT-1 GGAT-1 GGTG-1 GGCA-1 GCCA-1
CTGG-1 CCGA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301591|gb|AE003761.1|AE003761 Drosophila melanogaster genomic scaffold 142000013386035 section 86 of 105, complete sequence
Position Repeat Coverage Repeat
4862 TTTG * 5 18/20 TTTG TTTG TTTG CTTG TTCG
16067 ATAC * 5 18/20 ATAC ATAC ATAT ATAC ATTC
22653 TGAC * 10 36/40 TGAC TGGC TGAC TGGC TGAC TGAC TGAC TGGC TGAC CGAC
40067 ATAC * 6 22/24 ATAC ATAC ATAC ATAC ATAT ATAT
47182 ATAC * 5 18/20 ATAC ATAC ATAC ATAC ATGT
58779 GGTC * 5 18/20 GGTC CGTC GGTC GGTC GGGC
58942 TCCA * 5 18/20 TCCA TCCA TCCA ACCA GCCA
58965 AACC * 5 18/20 AACC AACC AACC AACC AGTC
64359 TTTC * 5 18/20 TTTC TTAC TTTC TTTC TTGC
75842 GCTG * 5 19/20 GCTG GCTG GCTG GCTG GCTC
97444 AATT * 5 18/20 AATT AATT AATT ACTT ATTT
133280 CTGC * 5 19/20 CTGC CCGC CTGC CTGC CTGC
137252 GGTC * 5 18/20 GGTC AGTC AGTC GGTC GGTC
141106 AACA * 10 37/40 AACA AACA AACA AACA AGCA AACA AACA ATCA AACA AAAA
143210 TCAA * 5 18/20 TCAA GCAA TCAC TCAA TCAA
162309 TTTC * 6 22/24 TTTC TTTC TTTC CTTC TTTC TTGC
183163 TTGT * 6 23/24 TTGT TTGT TTGT TTGT TTGT TTGC
189992 TATT * 5 18/20 TATT TAAA TATT TATT TATT
206130 TATG * 6 22/24 TATG TATG TAGG TATG TATG TATA
208955 TTTG * 5 18/20 TTTG TTTT TTTT TTTG TTTG
-----------------------------------------------------------------------------
Total sequence length......................... 224614
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 20
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AATT-1 AACA-1 AACC-1 ATAC-3 TATT-1 TATG-1 TTTG-2 TTTC-2
TTGT-1 TGAC-1 TCAA-1 TCCA-1 GGTC-2 GCTG-1 CTGC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301559|gb|AE003760.1|AE003760 Drosophila melanogaster genomic scaffold 142000013386035 section 85 of 105, complete sequence
Position Repeat Coverage Repeat
18474 GTAT * 5 18/20 GTAT GTAT GTAT TTAT ATAT
77390 TCCG * 5 19/20 TCCG TCCG TTCG TCCG TCCG
121586 AAAC * 5 18/20 AAAC AAAC AAAC AAAC AACA
134691 CAGC * 7 26/28 CAGC CAGC CAGC TAGC CAGC TAGC CAGC
146426 TTTA * 5 18/20 TTTA TTTA TTTA TTTG TTTT
152599 CTGG * 5 20/20 CTGG CTGG CTGG CTGG CTGG
162230 GATG * 5 18/20 GATG GACT GATG GATG GATG
162262 GATG * 6 22/24 GATG GACG GATG GATG GATG GCTG
-----------------------------------------------------------------------------
Total sequence length......................... 198310
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 8
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAC-1 TTTA-1 TCCG-1 GATG-2 GTAT-1 CAGC-1 CTGG-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301528|gb|AE003759.1|AE003759 Drosophila melanogaster genomic scaffold 142000013386035 section 84 of 105, complete sequence
Position Repeat Coverage Repeat
37191 CACT * 5 18/20 CACT CATT CACT CACA CACT
37801 CAGA * 5 18/20 CAGA CAGA GACA CAGA CAGA
52672 GGCT * 5 19/20 GGCT GGCT GGCT GGCT GGCA
87728 AATT * 5 18/20 AATT AATT AAAT AATG AATT
89256 TATT * 5 18/20 TATT TATG TATT TATT TCTT
135788 CAAA * 5 18/20 CAAA CAAA AACA CAAA CAAA
138847 CACT * 5 20/20 CACT CACT CACT CACT CACT
145522 CAAA * 5 18/20 CAAA CAAG CAAA CAAC CAAA
174089 AACT * 5 18/20 AACT GACT AACT GACT AACT
206405 CTGA * 6 22/24 CTGA CTGA CTGA CTGA CGGA CTGC
215284 TGAA * 6 22/24 TGAA TGAA TGAA CGAA TGAA TGTA
-----------------------------------------------------------------------------
Total sequence length......................... 226471
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 11
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AATT-1 AACT-1 TATT-1 TGAA-1 GGCT-1 CAAA-2 CAGA-1 CACT-2
CTGA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301501|gb|AE003758.1|AE003758 Drosophila melanogaster genomic scaffold 142000013386035 section 83 of 105, complete sequence
Position Repeat Coverage Repeat
33902 CCCA * 5 18/20 CCCA CCCA CCCA CTCA CTCA
36737 GACA * 6 22/24 GACA GATA GACA GACG GACA GACA
42341 GTCC * 5 18/20 GTCC GTCC GTCC GTCT GTCT
53869 TGTA * 5 19/20 TGTA TGTA TGTA TGTA CGTA
55958 AAAT * 5 18/20 AAAT AAAT AAAT AAAT TGAT
56280 GCTG * 5 18/20 GCTG GCTG GCTG GCTG AATG
102063 GTCA * 10 37/40 GTCA GTCA GTCA GTCA CTCA GTCA GTCA GTCA GTTA GTAA
106961 GTCT * 5 18/20 GTCT GTCT GTCT GTCT AACT
108325 TATG * 7 26/28 TATG TACA TATG TATG TATG TATG TATG
135857 ACAA * 5 18/20 ACAA ACAA AAAA AAAA ACAA
165400 CATA * 6 22/24 CATA CATA CATA CATA GATA CAGA
174788 TATG * 5 18/20 TATG TATG TATA TATG TATA
192859 TATG * 6 23/24 TATG TATG TATG TTTG TATG TATG
-----------------------------------------------------------------------------
Total sequence length......................... 225036
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 13
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 ACAA-1 TATG-3 TGTA-1 GACA-1 GTCA-1 GTCT-1 GTCC-1
GCTG-1 CATA-1 CCCA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301475|gb|AE003757.1|AE003757 Drosophila melanogaster genomic scaffold 142000013386035 section 82 of 105, complete sequence
Position Repeat Coverage Repeat
3461 TGTC * 5 18/20 TGTC TGTT CGTC TGTC TGTC
18456 ATAC * 5 18/20 ATAC ATAC ATAT ATAC GTAC
56308 TGTA * 5 18/20 TGTA TGTA TATA TGTA TGTT
62828 TCTG * 5 18/20 TCTG TCCG TCTG TCTG TCAG
72445 TGGA * 5 18/20 TGGA TGGA TGGT TGGT TGGA
76532 TTAT * 5 19/20 TTAT TTAT TTAT TTAT TTTT
111470 CAAT * 6 22/24 CAAT TAAT CAAT CACT CAAT CAAT
152138 GACG * 6 22/24 GACG GACG CACG GACG GACG CACG
155654 TGTC * 5 18/20 TGTC GGTC TGTC GGTC TGTC
184658 CCAG * 5 18/20 CCAG TCTG CCAG CCAG CCAG
188726 CATA * 5 18/20 CATA TGTA CATA CATA CATA
-----------------------------------------------------------------------------
Total sequence length......................... 191851
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 11
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATAC-1 TTAT-1 TGTA-1 TGTC-2 TGGA-1 TCTG-1 GACG-1 CAAT-1
CATA-1 CCAG-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301458|gb|AE003756.1|AE003756 Drosophila melanogaster genomic scaffold 142000013386035 section 81 of 105, complete sequence
Position Repeat Coverage Repeat
1667 TCAG * 9 33/36 TCAG TCAG TCAG TCAG TCAG TCAC TCAG TCGT TCAG
53815 GTTA * 5 18/20 GTTA GTTA GTTC GTTA GTTG
62077 TATG * 5 18/20 TATG TATG TATG TAAG TGTG
77448 ATTC * 5 18/20 ATTC AATC ACTC ATTC ATTC
85023 ACAG * 5 18/20 ACAG ACAG ACAA ACAG ACGG
94756 CCAA * 6 23/24 CCAA CCAA CCAA CCAA CCAA CCAG
142740 CTGG * 5 18/20 CTGG ATGG CTGG ATGG CTGG
148943 ACTG * 5 19/20 ACTG ACTG ACTG ACTG ACAG
204100 GAGT * 5 20/20 GAGT GAGT GAGT GAGT GAGT
204225 GCCG * 5 18/20 GCCG GCCG GCAG ACCG GCCG
204547 CTGC * 6 22/24 CTGC CTGC CTGC CTGT CTTC CTGC
205605 TCTG * 5 18/20 TCTG TCTG TCTG ACTG CCTG
210335 GACT * 5 18/20 GACT GACT GACT GACG GACA
225847 TGCC * 5 19/20 TGCC GGCC TGCC TGCC TGCC
247532 GCAG * 6 23/24 GCAG GCAG GCAG GCAT GCAG GCAG
250802 CAAT * 5 18/20 CAAT CAAT CAAT CAAT CACC
-----------------------------------------------------------------------------
Total sequence length......................... 256242
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 16
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATTC-1 ACAG-1 ACTG-1 TATG-1 TGCC-1 TCAG-1 TCTG-1 GAGT-1
GACT-1 GTTA-1 GCAG-1 GCCG-1 CAAT-1 CTGG-1 CTGC-1 CCAA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301445|gb|AE003755.1|AE003755 Drosophila melanogaster genomic scaffold 142000013386035 section 80 of 105, complete sequence
Position Repeat Coverage Repeat
11348 TTTA * 10 36/40 TTTA TTTA TTTA TTTA TTTA TTTA TTTA TTTA TTTT TGCT
102607 AAAT * 5 19/20 AAAT AAAT AAAT AAAT AAGT
129401 TGCC * 5 18/20 TGCC TGCC TGCT TGCA TGCC
165692 TAAT * 5 18/20 TAAT AAAT TAAT TAAT TCAT
179679 TTTA * 5 19/20 TTTA TATA TTTA TTTA TTTA
201060 CATA * 5 18/20 CATA TATA CATA CATA CATC
221849 GACT * 5 18/20 GACT GACT GACT GACT GTCA
-----------------------------------------------------------------------------
Total sequence length......................... 226763
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 7
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 TAAT-1 TTTA-2 TGCC-1 GACT-1 CATA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301396|gb|AE003754.1|AE003754 Drosophila melanogaster genomic scaffold 142000013386035 section 79 of 105, complete sequence
Position Repeat Coverage Repeat
13537 TTAT * 6 22/24 TTAT TTAT GTAT TTAT TTAT TCAT
41099 TTTG * 6 22/24 TTTG TTTG TCTG CTTG TTTG TTTG
51799 GCAC * 5 18/20 GCAC GCAC ATAC GCAC GCAC
106692 TATG * 5 19/20 TATG TATG TATG TATG TATA
110942 CCAT * 5 19/20 CCAT CCAA CCAT CCAT CCAT
118419 CGGA * 5 18/20 CGGA CGGA CGGA TGGA CGGG
142862 GACT * 5 18/20 GACT GAAT GACT GAAT GACT
142890 GACT * 6 22/24 GACT GACT GACT GACT GACT GGCG
145756 TGAA * 5 18/20 TGAA TGGA TGGA TGAA TGAA
146545 TTTA * 5 18/20 TTTA TTTA TTTA TTTT TTTT
189222 ATGT * 6 22/24 ATGT ACAT ATGT ATGT ATGT ATGT
203626 CAGT * 5 19/20 CAGT CAGT CAGT CAGT CAAT
-----------------------------------------------------------------------------
Total sequence length......................... 221822
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 12
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATGT-1 TATG-1 TTAT-1 TTTA-1 TTTG-1 TGAA-1 GACT-2 GCAC-1
CAGT-1 CGGA-1 CCAT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301360|gb|AE003753.1|AE003753 Drosophila melanogaster genomic scaffold 142000013386035 section 78 of 105, complete sequence
Position Repeat Coverage Repeat
158328 ATGG * 5 18/20 ATGG ATGG TTGG CTGG ATGG
218916 TATT * 6 22/24 TATT TATT TTAT TATT TATT TATT
-----------------------------------------------------------------------------
Total sequence length......................... 226342
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 2
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATGG-1 TATT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301339|gb|AE003752.1|AE003752 Drosophila melanogaster genomic scaffold 142000013386035 section 77 of 105, complete sequence
Position Repeat Coverage Repeat
10190 GAAT * 6 22/24 GAAT GAAT GAAT GAAT GAAT CACT
54423 CAAA * 6 22/24 CAAA CAAA CAAA CAAA CAAA CGCA
106864 TTTA * 5 18/20 TTTA TTTA TTTA TTCA TTCA
121395 AATC * 5 20/20 AATC AATC AATC AATC AATC
133430 ACAT * 5 18/20 ACAT AGAT ACAT ACAT ATAT
138941 AAAT * 5 19/20 AAAT AAAT AAAT AAAT AAAC
160665 ATGT * 5 19/20 ATGT ATGT ATGT ATGT ATGC
166670 AACA * 5 18/20 AACA AACA AAAC AACA AACA
192326 CAGT * 6 22/24 CAGT CAGT CAGT CAGT CAGT TCGT
199259 ACAT * 5 18/20 ACAT ATAT ACAT ACAT ATAT
200162 TCAG * 5 18/20 TCAG TTAG TCAG TCAT TCAG
205416 ACAT * 5 18/20 ACAT ATAC ACAT ACAT ACAT
210010 ACAT * 5 18/20 ACAT ATGT ACAT ACAT ACAT
-----------------------------------------------------------------------------
Total sequence length......................... 225478
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 13
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 AATC-1 AACA-1 ATGT-1 ACAT-4 TTTA-1 TCAG-1 GAAT-1
CAAA-1 CAGT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301280|gb|AE003751.1|AE003751 Drosophila melanogaster genomic scaffold 142000013386035 section 76 of 105, complete sequence
Position Repeat Coverage Repeat
1419 TCCG * 7 26/28 TCCG TCCG TCCG TCCA TCCA TCCG TCCG
21640 CACT * 5 18/20 CACT CACT CACA CACA CACT
49700 AAAT * 5 18/20 AAAT AAAT AAAT AAAT TACT
79997 ATAA * 6 22/24 ATAA ATAT TTAA ATAA ATAA ATAA
211004 ATGG * 5 19/20 ATGG ACGG ATGG ATGG ATGG
222471 GTCT * 5 18/20 GTCT GTCT GTCT CTCT CTCT
245233 CCTG * 5 18/20 CCTG CCTG CCTG CCTT CTTG
259154 AGAC * 6 22/24 AGAC AGAC AGAC AGAC AAAA AGAC
261858 TACA * 6 22/24 TACA TACA TACA AACA TATA TACA
269298 GTGA * 6 23/24 GTGA GTGA GTGA GTAA GTGA GTGA
-----------------------------------------------------------------------------
Total sequence length......................... 269518
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 10
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 ATAA-1 ATGG-1 AGAC-1 TACA-1 TCCG-1 GTGA-1 GTCT-1
CACT-1 CCTG-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301241|gb|AE003750.1|AE003750 Drosophila melanogaster genomic scaffold 142000013386035 section 75 of 105, complete sequence
Position Repeat Coverage Repeat
16291 AGAT * 5 18/20 AGAT AGAT AGAT AGCT AGAA
16326 AGAT * 7 26/28 AGAT AGAT AGGT GGAT AGAT AGAT AGAT
22720 TCAG * 5 18/20 TCAG TCAG TCAG TCAG TTGG
36995 GACT * 6 22/24 GACT GACT GGCT GACT GACT GCCT
41656 ATTT * 5 18/20 ATTT ATAT ATGT ATTT ATTT
45968 AGTG * 5 18/20 AGTG AGTG AGTG AGTG AGGA
63780 ACTG * 5 18/20 ACTG ACTG ACTG GCTG GCTG
63800 GCTG * 5 18/20 GCTG GCTG GCTG ACTG ACTG
69617 CTGA * 5 18/20 CTGA CTAA CTGA CTAA CTGA
71841 CTGA * 5 19/20 CTGA CTAA CTGA CTGA CTGA
138638 GCCT * 5 20/20 GCCT GCCT GCCT GCCT GCCT
154028 ACCG * 6 24/24 ACCG ACCG ACCG ACCG ACCG ACCG
160572 TTAT * 5 18/20 TTAT TTAT TTAT TTAA TGAT
185892 TAAT * 5 18/20 TAAT TTAT TAAT TTAT TAAT
208833 CGGT * 6 22/24 CGGT CGGT CGGT CGGT CGAC CGGT
214616 GTGA * 6 22/24 GTGA GTGA GTGA GTGA GTGA GTAG
219012 ACAG * 5 18/20 ACAG ACAG ACAC ACAG ACAC
221233 CAGG * 5 19/20 CAGG CAGG CAGT CAGG CAGG
-----------------------------------------------------------------------------
Total sequence length......................... 227398
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 18
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATTT-1 AGAT-2 AGTG-1 ACAG-1 ACTG-1 ACCG-1 TAAT-1 TTAT-1
TCAG-1 GACT-1 GTGA-1 GCTG-1 GCCT-1 CAGG-1 CTGA-2 CGGT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301193|gb|AE003749.1|AE003749 Drosophila melanogaster genomic scaffold 142000013386035 section 74 of 105, complete sequence
Position Repeat Coverage Repeat
3729 AACT * 6 22/24 AACT AACT AACT TACT AACT AACC
14331 TTGT * 6 22/24 TTGT CTGT TTGT TTGC TTGT TTGT
24794 TACA * 5 18/20 TACA TGCA TACA TGCA TACA
29120 GGGC * 5 18/20 GGGC GGGC GGGC AGGC GGAC
121373 AAAC * 5 19/20 AAAC AAAC AAAT AAAC AAAC
179622 TCAG * 7 26/28 TCAG TTAG TCAG TCAG TCAG TCAG TCAA
183097 CAAA * 5 18/20 CAAA CAAA CAAA CAAA CTGA
201839 TGGC * 6 23/24 TGGC TGGC TGGC TGGC TGGT TGGC
-----------------------------------------------------------------------------
Total sequence length......................... 228472
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 8
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAC-1 AACT-1 TACA-1 TTGT-1 TGGC-1 TCAG-1 GGGC-1 CAAA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301169|gb|AE003748.1|AE003748 Drosophila melanogaster genomic scaffold 142000013386035 section 73 of 105, complete sequence
Position Repeat Coverage Repeat
1540 TGGC * 7 26/28 TGGC TGGC TGGC TAGC TGGC TGGC GGGC
1992 CTGT * 5 18/20 CTGT CTGT CTGT CTGA CTGA
2865 GAAC * 5 18/20 GAAC GGAC GAAC GAAC GACC
38936 TCAC * 5 18/20 TCAC TCAC TCAC TCAT TCAT
40840 CCAC * 6 23/24 CCAC CCAC CCAC CCAT CCAC CCAC
100478 TTGA * 7 26/28 TTGA TTGA TTGA TCGA TTAA TTGA TTGA
101036 AAAT * 5 18/20 AAAT GAAT TAAT AAAT AAAT
128710 ACAA * 5 18/20 ACAA GCCA ACAA ACAA ACAA
134027 ACAA * 6 22/24 ACAA ACAA ACAA ACAA ACAA ACTG
134769 ATTC * 5 19/20 ATTC ATTC ATTC ATTC ATTT
142438 GGAT * 5 18/20 GGAT GGAT GGAT GGAT AGAC
142808 GATA * 6 22/24 GATA GATC GAGA GATA GATA GATA
142834 TAGA * 6 22/24 TAGA GAGA TAGA TAGA GAGA TAGA
142860 GATA * 28 102/112 GATA GATA GATA GATA GATA GATA GATA GATA GATA GATA GATA GATA GATA GATA GATA GATA GATA GATA GATA GATA GAAA GAAA GATA GATA GATA GATC GTCT ATCT
144009 TGGT * 5 19/20 TGGT TGGT TGGT TGGT TGGC
145424 GCTT * 5 18/20 GCTT GCTT GCTT GCTT GGCT
147067 ATAC * 8 29/32 ATAC ATAC ATAC ATAC ATAT GTAC ATAC ATAT
148424 CTGC * 6 22/24 CTGC CTGC CTGC CTGC CTGA CAGC
151752 TTGG * 6 23/24 TTGG TTGG TTGG TTGG TTGG TCGG
152007 CATA * 5 20/20 CATA CATA CATA CATA CATA
156143 CCAG * 6 22/24 CCAG CCAG CCAG CCGG CCAG GCAG
177827 TACA * 5 18/20 TACA TACA TACA TATG TACA
210472 TTTA * 5 18/20 TTTA TTTA TTTA TTTA CTTG
218407 TATG * 5 19/20 TATG TATG AATG TATG TATG
229412 AATC * 6 22/24 AATC AGCC AATC AATC AATC AATC
237277 CACC * 5 18/20 CACC CACC CACC CAGC CACT
250197 AAAC * 5 18/20 AAAC AAAC AAAC AAAT CAAC
-----------------------------------------------------------------------------
Total sequence length......................... 256636
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 27
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 AAAC-1 AATC-1 ATAC-1 ATTC-1 ACAA-2 TATG-1 TAGA-1
TACA-1 TTTA-1 TTGA-1 TTGG-1 TGGT-1 TGGC-1 TCAC-1 GAAC-1
GATA-2 GGAT-1 GCTT-1 CATA-1 CACC-1 CTGT-1 CTGC-1 CCAG-1
CCAC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301134|gb|AE003747.1|AE003747 Drosophila melanogaster genomic scaffold 142000013386035 section 72 of 105, complete sequence
Position Repeat Coverage Repeat
33300 TATG * 5 18/20 TATG TACA TATG TATG TATG
58878 TTTA * 5 18/20 TTTA AATA TTTA TTTA TTTA
132105 AAAT * 5 19/20 AAAT AAAT AAAT AAAT AATT
148220 TTGT * 5 18/20 TTGT CTGT TTGC TTGT TTGT
148466 ATTT * 5 18/20 ATTT ATTT CTCT ATTT ATTT
151035 GTGG * 5 18/20 GTGG GTGG TTGG GTGG TTGG
173134 CCAC * 5 19/20 CCAC CCAC CCAC TCAC CCAC
181152 GATA * 5 18/20 GATA GATA GATA GAGA GATG
181449 ATTC * 7 27/28 ATTC ATTC ATTC ATTC ATTC ATTC ATTG
182976 GATT * 5 18/20 GATT GATT GATT GATG GATG
189077 GTAT * 5 18/20 GTAT ATAT GTAT GTAT GTGT
189232 ATGT * 5 18/20 ATGT ATGT ATAT ATGT ATAT
196220 CGCA * 5 18/20 CGCA CTCA CACA CGCA CGCA
-----------------------------------------------------------------------------
Total sequence length......................... 204469
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 13
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 ATTT-1 ATTC-1 ATGT-1 TATG-1 TTTA-1 TTGT-1 GATA-1
GATT-1 GTAT-1 GTGG-1 CGCA-1 CCAC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301086|gb|AE003746.1|AE003746 Drosophila melanogaster genomic scaffold 142000013386035 section 71 of 105, complete sequence
Position Repeat Coverage Repeat
8223 TTCT * 6 23/24 TTCT TTCG TTCT TTCT TTCT TTCT
42501 GTAT * 6 22/24 GTAT ATAT GTTT GTAT GTAT GTAT
68340 GCCA * 5 18/20 GCCA GCTT GCCA GCCA GCCA
73991 AACG * 5 18/20 AACG AACG AAAG AACG AACA
76076 AAAT * 5 18/20 AAAT AGAT AAAT ACAT AAAT
95981 ATAC * 5 18/20 ATAC ATAT ATAC ATAC ATAT
129179 AATA * 5 18/20 AATA TATA AGTA AATA AATA
161993 TATT * 7 26/28 TATT TATT TATT TATT TATT TATA TGTT
181687 CCAG * 5 18/20 CCAG CCAG CTAG CCAG CTAG
-----------------------------------------------------------------------------
Total sequence length......................... 226318
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 9
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 AATA-1 AACG-1 ATAC-1 TATT-1 TTCT-1 GTAT-1 GCCA-1
CCAG-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301057|gb|AE003745.1|AE003745 Drosophila melanogaster genomic scaffold 142000013386035 section 70 of 105, complete sequence
Position Repeat Coverage Repeat
5381 ATTT * 5 18/20 ATTT ATTT ATAT ATAT ATTT
26811 AAAT * 5 18/20 AAAT AAAT AAAT AAAA AAAC
27713 GTTG * 6 23/24 GTTG CTTG GTTG GTTG GTTG GTTG
28274 ATGT * 10 37/40 ATGT ATGT ATGT ATGT ACGT ATGT ATGT ACGT ATGT GTGT
30061 TGGA * 5 18/20 TGGA TGGT TGGA TGGC TGGA
30388 GCCA * 5 18/20 GCCA GCCA GCCA ACCA GCCC
58141 TAAT * 5 18/20 TAAT TAAT AAAT TATT TAAT
69417 CCAT * 5 19/20 CCAT GCAT CCAT CCAT CCAT
71231 TTGG * 5 18/20 TTGG TTGG TTGG TTGG TAGT
72665 ATAC * 6 23/24 ATAC ATAC ATAC ATAC ATAC ATAT
101556 CAAA * 6 24/24 CAAA CAAA CAAA CAAA CAAA CAAA
105315 ACAT * 5 19/20 ACAT ACAT ACAT ACAT ATAT
108688 TCGG * 7 26/28 TCGG TCGG TCGG TCGG TCGG TCGG GCGT
118655 GTTT * 5 18/20 GTTT GTTT GTTT GTTT GCCT
133731 AGAT * 6 23/24 AGAT AGAT AGAT AGAT TGAT AGAT
137902 GATC * 6 22/24 GATC GATC GATC GATC TATG GATC
160233 AAAG * 5 18/20 AAAG AAAG AAAG AAAA AAAT
165354 ACAT * 5 18/20 ACAT ATAT ACAT ACAT ACAC
177488 ACCA * 6 22/24 ACCA ACCA ACCA ACCA AAGA ACCA
211409 AATT * 5 18/20 AATT AATT ACTT AATT AATA
214981 CTGA * 8 29/32 CTGA CTGA CTGA CTAA CTGA CTGA ATGA ATGA
-----------------------------------------------------------------------------
Total sequence length......................... 219341
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 21
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 AAAG-1 AATT-1 ATAC-1 ATTT-1 ATGT-1 AGAT-1 ACAT-2
ACCA-1 TAAT-1 TTGG-1 TGGA-1 TCGG-1 GATC-1 GTTT-1 GTTG-1
GCCA-1 CAAA-1 CTGA-1 CCAT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7301010|gb|AE003744.1|AE003744 Drosophila melanogaster genomic scaffold 142000013386035 section 69 of 105, complete sequence
Position Repeat Coverage Repeat
46740 GCCA * 6 22/24 GCCA GCCA GCCA GGCA GCCA GCTA
59133 TGTC * 5 19/20 TGTC TGTC GGTC TGTC TGTC
69538 CTAT * 8 30/32 CTAT CTGT CTAT ATAT CTAT CTAT CTAT CTAT
70483 TGAC * 5 18/20 TGAC TGCT TGAC TGAC TGAC
74097 TGTT * 5 18/20 TGTT TGTT TGTT TGTT GCTT
79686 CAAA * 6 22/24 CAAA CAAA CAAA ACAA CAAA CAAA
109139 GCCA * 5 18/20 GCCA GCCA GCCA ACCA ACCA
173043 ATCT * 24 88/96 ATCT ATAT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATGT ATCT ATCT ATCT GTCT ATCA TATA
177070 TTTA * 5 18/20 TTTA TTAA TTTA TTTA TTTG
-----------------------------------------------------------------------------
Total sequence length......................... 239327
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 9
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATCT-1 TTTA-1 TGAC-1 TGTT-1 TGTC-1 GCCA-2 CAAA-1 CTAT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7300988|gb|AE003743.1|AE003743 Drosophila melanogaster genomic scaffold 142000013386035 section 68 of 105, complete sequence
Position Repeat Coverage Repeat
18367 CATA * 6 22/24 CATA GATA CATA CATA CGTA CATA
42355 GTCA * 5 18/20 GTCA GTCA GTCA GTCA GCCT
48167 AACG * 5 18/20 AACG AACG TACG TACG AACG
48207 CCAC * 5 18/20 CCAC CCAT CTAC CCAC CCAC
49808 TATG * 6 22/24 TATG TATG TATG TATG TATG CATA
62827 TGTC * 6 22/24 TGTC TGTC TGTC TGTT TGTC TGTG
66409 TTTG * 5 18/20 TTTG TTTG TTTT TTTG TTTT
67526 CCAG * 5 18/20 CCAG CCAT CCAG TCAG CCAG
80645 TAAA * 5 19/20 TAAA TAAA TAAA TAAA TACA
96343 CTGC * 8 29/32 CTGC CTGC CTGC CAGC CTGC CTGC CTGC CGTC
99985 TTAG * 5 18/20 TTAG TAAG TTAG TTAG TAAG
101498 GTCA * 5 18/20 GTCA GGCT GTCA GTCA GTCA
102458 TATG * 6 22/24 TATG TATG TATG TATA TATT TATG
103620 TCTG * 6 22/24 TCTG TCTG TCTG TCTG TCTG TTGG
116114 TCCA * 6 22/24 TCCA TTCA TCCA TCCA TCCA TCTA
129596 TGAC * 7 26/28 TGAC TGCC TAAC TGAC TGAC TGAC TGAC
146515 TGAC * 7 26/28 TGAC TGAC TGAC TGAC TGAC TGAC TGCT
156595 GACT * 10 36/40 GACT GACT GACT GACT GACT GACG GACT GACA GACT GCCA
-----------------------------------------------------------------------------
Total sequence length......................... 217674
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 18
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AACG-1 TAAA-1 TATG-2 TTAG-1 TTTG-1 TGAC-2 TGTC-1 TCTG-1
TCCA-1 GACT-1 GTCA-2 CATA-1 CTGC-1 CCAG-1 CCAC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7300960|gb|AE003742.1|AE003742 Drosophila melanogaster genomic scaffold 142000013386035 section 67 of 105, complete sequence
Position Repeat Coverage Repeat
22233 TATG * 5 19/20 TATG TATG TATG TATA TATG
34500 GCAG * 5 18/20 GCAG GCAG GACG GCAG GCAG
34520 TCAG * 5 19/20 TCAG TCAG TCAG TCAG TCCG
79845 ACTG * 5 18/20 ACTG ACTG ACTG ACGG AATG
83669 TATG * 5 18/20 TATG TATG TATG TACA TATG
134998 GATG * 5 18/20 GATG GATA GATG GCTG GATG
148327 TATT * 5 18/20 TATT TATG TATA TATT TATT
149787 TGTA * 6 23/24 TGTA TGTA TGTA TGTA TGTA TGCA
161183 TGCT * 5 18/20 TGCT TGCT TGCC TGCT TGTT
190851 GGAT * 5 18/20 GGAT GGAT GGAT GAAA GGAT
195472 CAGC * 5 19/20 CAGC CAGC CAGC CAGT CAGC
196098 TGTT * 5 19/20 TGTT TGTT TGTT TGTT TTTT
204951 ATTT * 5 19/20 ATTT ATTC ATTT ATTT ATTT
204979 TTTA * 5 18/20 TTTA TCTA TTTA TTCA TTTA
209480 ATTG * 5 18/20 ATTG ATTG ATTA ATTG ACTG
223192 AGTG * 6 22/24 AGTG AGTG AGTG AGTG AATG ACTG
227304 CCAA * 6 23/24 CCAA CCAA CCAA CCAA CCAA CAAA
-----------------------------------------------------------------------------
Total sequence length......................... 233673
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 17
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATTT-1 ATTG-1 AGTG-1 ACTG-1 TATT-1 TATG-2 TTTA-1 TGTA-1
TGTT-1 TGCT-1 TCAG-1 GATG-1 GGAT-1 GCAG-1 CAGC-1 CCAA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7300931|gb|AE003741.1|AE003741 Drosophila melanogaster genomic scaffold 142000013386035 section 66 of 105, complete sequence
Position Repeat Coverage Repeat
981 AATT * 5 18/20 AATT AATC AACT AATT AATT
4893 GATG * 5 18/20 GATG GATA GATG GAAG GATG
9258 TGAA * 6 22/24 TGAA TGAG TGAC TGAA TGAA TGAA
9533 TCTA * 6 23/24 TCTA TCTA TATA TCTA TCTA TCTA
12663 CAAA * 7 27/28 CAAA CAAA CAAA CAAA CAAA CAAA CAAT
16352 TTGT * 6 22/24 TTGT TTAT TTGC TTGT TTGT TTGT
50057 AAAT * 5 18/20 AAAT AAAT AAAA AATT AAAT
56198 TTAA * 5 18/20 TTAA TTAA TTAC TTAT TTAA
56464 CAAC * 5 18/20 CAAC CAAC CAAC CAAC CCAA
71619 GGAA * 5 18/20 GGAA GGAA GGAA GGAT GGCA
76255 TCTT * 5 19/20 TCTT TCTT TCAT TCTT TCTT
97906 AATA * 6 22/24 AATA AATA AATA GATA AATA ATTA
132106 CAGC * 7 26/28 CAGC CAGC CAGC CAGC CAGC CAGC CACA
156718 ATAC * 5 19/20 ATAC ATAC ATAC ATAC ATAT
190643 AATA * 5 18/20 AATA AATA CATA CATA AATA
195727 ATGT * 5 19/20 ATGT CTGT ATGT ATGT ATGT
197030 ATTT * 5 18/20 ATTT ATTT AAAT ATTT ATTT
204762 GTAT * 6 22/24 GTAT GTAT ATAT GTAT GTAT GAAT
205286 TGAC * 5 18/20 TGAC CAAC TGAC TGAC TGAC
223367 CGCA * 5 18/20 CGCA GGCA CGCC CGCA CGCA
225828 CTCG * 5 18/20 CTCG CTCG CTCG CTCT CTCT
-----------------------------------------------------------------------------
Total sequence length......................... 233313
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 21
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 AATA-2 AATT-1 ATAC-1 ATTT-1 ATGT-1 TTAA-1 TTGT-1
TGAA-1 TGAC-1 TCTA-1 TCTT-1 GATG-1 GTAT-1 GGAA-1 CAAA-1
CAAC-1 CAGC-1 CTCG-1 CGCA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7300894|gb|AE003740.1|AE003740 Drosophila melanogaster genomic scaffold 142000013386035 section 65 of 105, complete sequence
Position Repeat Coverage Repeat
10128 GTGG * 5 18/20 GTGG GTGG TTGG GTGG TTGG
13411 ACGG * 6 22/24 ACGG ATGG ACAG ACGG ACGG ACGG
13435 ATGG * 11 41/44 ATGG ATGG ATGG TTGG ATGG ATGG TTGG ATGG ATGG TTGG ATGG
47079 TATT * 5 19/20 TATT TATT TGTT TATT TATT
84581 AGTC * 5 20/20 AGTC AGTC AGTC AGTC AGTC
104441 AATT * 6 22/24 AATT AATT GATT AATT AATT AATC
111128 GATA * 6 22/24 GATA GATA GATA GATA TATG GATA
132018 GATA * 6 22/24 GATA GATA CATA GATA CATA GATA
150049 AATT * 5 18/20 AATT AATT AGTT AATT CATT
150717 TGGT * 5 19/20 TGGT TGGT TGGT TGGG TGGT
163468 GGAC * 5 18/20 GGAC GGAT GGAC GGAC GGCC
165533 CATA * 5 18/20 CATA CATA CATA CATG TATA
171814 AGCC * 5 18/20 AGCC AGCC AGCT AGCC ACCC
190484 ACCC * 5 19/20 ACCC ACCC ACTC ACCC ACCC
194710 TGGC * 5 18/20 TGGC TGGC TGGC TGGC TGCT
208071 TTTA * 5 18/20 TTTA ATTA TTTA TTTA ATTA
216432 CTGA * 5 18/20 CTGA CTGA ATGA CTGG CTGA
221223 TATG * 5 18/20 TATG TATG TATG TATG GATA
228509 TTGT * 8 30/32 TTGT TTGT TTGT TTGT TTGT TTGT TTGT TGTT
-----------------------------------------------------------------------------
Total sequence length......................... 234569
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 19
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AATT-2 ATGG-1 AGTC-1 AGCC-1 ACGG-1 ACCC-1 TATT-1 TATG-1
TTTA-1 TTGT-1 TGGT-1 TGGC-1 GATA-2 GTGG-1 GGAC-1 CATA-1
CTGA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7300851|gb|AE003739.1|AE003739 Drosophila melanogaster genomic scaffold 142000013386035 section 64 of 105, complete sequence
Position Repeat Coverage Repeat
8660 TCAG * 5 18/20 TCAG TCAG TCAG TCAG CCAA
51718 AACC * 5 18/20 AACC AACC AATG AACC AACC
52621 TACT * 5 19/20 TACT TACT TACT TACT TATT
125119 TATT * 5 18/20 TATT TGTT TATT TGTT TATT
142263 TATG * 8 29/32 TATG TATG TATG TATG TATG TATA TATA AATG
154892 CCGA * 5 18/20 CCGA CCAA CCGA CCAA CCGA
154912 CCAA * 5 18/20 CCAA CTAA CCAA CCAA CCGA
167051 TATG * 5 18/20 TATG TATG TATG TATG TACA
174215 CTGC * 5 18/20 CTGC CTGC CTGC CTGC CTCA
180476 TACA * 5 18/20 TACA TACA TACG TACA TCCA
-----------------------------------------------------------------------------
Total sequence length......................... 223815
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 10
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AACC-1 TATT-1 TATG-2 TACA-1 TACT-1 TCAG-1 CTGC-1 CCAA-1
CCGA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7300816|gb|AE003738.1|AE003738 Drosophila melanogaster genomic scaffold 142000013386035 section 63 of 105, complete sequence
Position Repeat Coverage Repeat
418 AAGC * 5 18/20 AAGC AAGC AAGT AAGC GAGC
8258 ATAA * 5 18/20 ATAA ATGA ATAA ATGA ATAA
14026 AGAA * 5 18/20 AGAA AAAA AAAA AGAA AGAA
15676 CTGT * 5 18/20 CTGT CTGT CTGT CTGG TTGT
25711 TGAA * 5 18/20 TGAA TGAA TAAA TGAA TGAG
59080 GGTG * 5 18/20 GGTG TGTG GGTG TGTG GGTG
61747 GGAC * 5 18/20 GGAC GGAC AGAC AGAC GGAC
65115 CATT * 5 18/20 CATT CCTT CATT CAAT CATT
95035 GAAT * 5 19/20 GAAT GAAC GAAT GAAT GAAT
113555 TTAT * 5 18/20 TTAT TTAT TTAT TTAT TTGG
113783 AATA * 5 18/20 AATA AATT AATA AATA TATA
114363 TGTA * 5 18/20 TGTA TGTA TGTA TGTA TGAT
114525 TTTG * 5 18/20 TTTG TTTG TTTG TTTG TCTA
115632 TCCG * 5 18/20 TCCG TCCG TTCG TCTG TCCG
121130 CACC * 5 18/20 CACC CACA CACC CACA CACC
142782 CAGA * 5 18/20 CAGA CACA CAGA CTGA CAGA
161139 CATT * 5 18/20 CATT TATA CATT CATT CATT
161895 AGAA * 5 18/20 AGAA AGAA TGAA ATAA AGAA
164471 CCTC * 6 22/24 CCTC CCTC CCTC CCTC CCTC CTTA
201357 TTTA * 5 18/20 TTTA TTTA TTTA TTTT ATTA
-----------------------------------------------------------------------------
Total sequence length......................... 226102
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 20
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AATA-1 AAGC-1 ATAA-1 AGAA-2 TTAT-1 TTTA-1 TTTG-1 TGAA-1
TGTA-1 TCCG-1 GAAT-1 GGAC-1 GGTG-1 CATT-2 CAGA-1 CACC-1
CTGT-1 CCTC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7300796|gb|AE003737.1|AE003737 Drosophila melanogaster genomic scaffold 142000013386035 section 62 of 105, complete sequence
Position Repeat Coverage Repeat
10536 AGCC * 5 18/20 AGCC ACCC AGCC ATCC AGCC
24923 TGAC * 10 36/40 TGAC TGAC TAAC TGAC TAAC TGAC TGAC TGAC TGAG TGAG
70341 CATA * 5 18/20 CATA CATA TAAA CATA CATA
93655 TATG * 5 18/20 TATG TATG TATG TATA TCTG
96561 ATTT * 5 18/20 ATTT ACTT ATTT ATTT AATT
97424 GGTA * 5 18/20 GGTA GTTA GGTA GGTA GGTG
110618 TGTT * 5 18/20 TGTT TGTT TGTG TGTT GGTT
113726 AAAT * 5 18/20 AAAT AATT AAAT AAAT AAAA
120692 ACCA * 6 22/24 ACCA ACCA ACCA ATCA AACA ACCA
120724 ACCA * 9 33/36 ACCA ATCA ACCA ACCA ACCA AACA ACCA ACCA ACTA
151613 GACT * 5 18/20 GACT GCCT GACT GACT GGCT
156840 ATAC * 5 18/20 ATAC ATAC ATAC ATAT ATAA
189158 CTGA * 6 22/24 CTGA GTGA CTGG CTGA CTGA CTGA
209133 TATG * 6 22/24 TATG CATA TATG TATG TATG TATG
211449 TGAC * 6 22/24 TGAC TGAC TGAC TGAC TGCC TGGC
218031 CACT * 5 19/20 CACT CACT CACT CACC CACT
221327 TTCA * 6 22/24 TTCA TTCA TTCA TTCA GTCA CTCA
227349 ATTT * 5 18/20 ATTT ATTA ATAT ATTT ATTT
233639 TGAC * 6 22/24 TGAC TGAC TGAC TGAC TGGC TGGC
233663 TGGT * 7 26/28 TGGT TGGT TGGT TGGT TGGT TAGC TGGT
-----------------------------------------------------------------------------
Total sequence length......................... 238433
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 20
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 ATAC-1 ATTT-2 AGCC-1 ACCA-2 TATG-2 TTCA-1 TGAC-3
TGTT-1 TGGT-1 GACT-1 GGTA-1 CATA-1 CACT-1 CTGA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7300765|gb|AE003736.1|AE003736 Drosophila melanogaster genomic scaffold 142000013386035 section 61 of 105, complete sequence
Position Repeat Coverage Repeat
25624 CATC * 5 18/20 CATC CATC CACC CATA CATC
28985 CAGC * 5 18/20 CAGC CAGC CAGC CAGC AACC
101007 AAAC * 6 22/24 AAAC AAAC AAAC AAGC AAAC AATC
119817 GGAC * 6 22/24 GGAC AGAC AGAC GGAC GGAC GGAC
194865 TGAC * 5 18/20 TGAC TGAT TGAC TGAC CGAC
194889 TGAC * 7 26/28 TGAC TGAC TGAC TGAC TGAC CGAC TGAT
199079 CAGG * 5 18/20 CAGG CAGG CAGG CAGG CACA
233865 CATC * 5 18/20 CATC CATC CATC CATC CAAT
245690 GTTG * 5 18/20 GTTG GTTG GTTG GTTT GTTC
245939 GACC * 6 22/24 GACC GACC CACC GACC GACC GACT
-----------------------------------------------------------------------------
Total sequence length......................... 260278
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 10
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAC-1 TGAC-2 GACC-1 GTTG-1 GGAC-1 CATC-2 CAGG-1 CAGC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7300751|gb|AE003735.1|AE003735 Drosophila melanogaster genomic scaffold 142000013386035 section 60 of 105, complete sequence
Position Repeat Coverage Repeat
17236 ATTA * 5 18/20 ATTA ATTA ATCA ATTC ATTA
65258 TGGG * 5 18/20 TGGG TGGT TGGG TGGT TGGG
94633 TATG * 5 18/20 TATG TATG TGTG CATG TATG
125919 AGTG * 5 19/20 AGTG AGTG AGTG AGTG AGCG
136526 CTGG * 5 18/20 CTGG CTGG CTGG CTGA CTGA
139027 TTGT * 5 19/20 TTGT TTGT TTGT TTGT TTTT
140569 TAAA * 5 18/20 TAAA TAAA TAAA TAAA TTAG
185269 TTAT * 5 18/20 TTAT TAAT TTAT TAAT TTAT
-----------------------------------------------------------------------------
Total sequence length......................... 231849
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 8
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATTA-1 AGTG-1 TAAA-1 TATG-1 TTAT-1 TTGT-1 TGGG-1 CTGG-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7300718|gb|AE003734.1|AE003734 Drosophila melanogaster genomic scaffold 142000013386035 section 59 of 105, complete sequence
Position Repeat Coverage Repeat
40778 ACAA * 6 22/24 ACAA ACAA ACAA ACAA ACAA AGAC
76138 AGAT * 6 22/24 AGAT AGAT AGAT AGAT AGAT GGAC
80100 TCGG * 5 18/20 TCGG TCGG GCGG TCGG TCGT
96744 GTAT * 5 18/20 GTAT GTAT GTAT GTAT GCAC
100338 GAAG * 5 19/20 GAAG GAAG GAAG GAAG GATG
103190 AACG * 9 34/36 AACG AACT AACG AACG AACG AACG AACG AACA AACG
104694 TATG * 5 19/20 TATG TATG TAAG TATG TATG
110343 TTGA * 6 22/24 TTGA TTGA TTGC TTGA TTGC TTGA
157587 ATAC * 5 18/20 ATAC ATAT GTAC ATAC ATAC
179313 CCAT * 5 18/20 CCAT CCAT CCAG CCAT CCAG
179352 ATCC * 6 22/24 ATCC ATCC AACC ATCC ATCC ATCT
191060 GTAG * 5 18/20 GTAG GTAG GTAG GCAG GCAG
193393 TCCA * 6 22/24 TCCA TCCA TCCA TCCA ATCA TCCA
198461 GTAT * 5 18/20 GTAT GTAT GTAA GTAT GTAG
202403 GACT * 5 18/20 GACT GAGT GACT AACT GACT
217356 ATTA * 5 18/20 ATTA AATA AATA ATTA ATTA
-----------------------------------------------------------------------------
Total sequence length......................... 240910
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 16
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AACG-1 ATAC-1 ATTA-1 ATCC-1 AGAT-1 ACAA-1 TATG-1 TTGA-1
TCGG-1 TCCA-1 GAAG-1 GACT-1 GTAT-2 GTAG-1 CCAT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7300681|gb|AE003733.1|AE003733 Drosophila melanogaster genomic scaffold 142000013386035 section 58 of 105, complete sequence
Position Repeat Coverage Repeat
5890 ACAG * 5 18/20 ACAG AGAG GCAG ACAG ACAG
77491 AAAG * 5 18/20 AAAG AAAG ACAG AAAG AGAG
89059 TATC * 6 22/24 TATC TATC TATG CATC TATC TATC
97821 ACCA * 5 18/20 ACCA CCCA ACCA CCCA ACCA
99992 TTGC * 5 18/20 TTGC TTGC TTGC TTGC TTTG
107323 CAGT * 7 26/28 CAGT CAGT AACT CAGT CAGT CAGT CAGT
139943 GTCC * 6 22/24 GTCC GTCC GTCC GTCC GTCC GCTC
140571 ATGC * 5 18/20 ATGC ATGC ATGC ATGC ATTT
180068 AAAC * 5 18/20 AAAC AAAC AAAC AAAC TAGC
186213 AGAC * 7 27/28 AGAC AGAC AGAC AGAC AGAC AGAC AGAA
188948 GATA * 5 18/20 GATA GAGA GATA CATA GATA
202224 AAAC * 5 18/20 AAAC AAAC AAAC AAAC GAAT
202899 ATGT * 5 18/20 ATGT ATGT ACAT ATGT ATGT
209249 ACAT * 5 18/20 ACAT ACAT ACAA ACAT ATAT
215452 ACAT * 5 19/20 ACAT GCAT ACAT ACAT ACAT
219098 AAGA * 5 19/20 AAGA AAGA AAGA AATA AAGA
228036 AGAT * 5 20/20 AGAT AGAT AGAT AGAT AGAT
-----------------------------------------------------------------------------
Total sequence length......................... 230303
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 17
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAG-1 AAAC-2 AAGA-1 ATGT-1 ATGC-1 AGAT-1 AGAC-1 ACAT-2
ACAG-1 ACCA-1 TATC-1 TTGC-1 GATA-1 GTCC-1 CAGT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7300654|gb|AE003732.1|AE003732 Drosophila melanogaster genomic scaffold 142000013386035 section 57 of 105, complete sequence
Position Repeat Coverage Repeat
3842 CCAC * 5 18/20 CCAC CAAC CCAC CCAC TCAC
34768 ACAT * 5 18/20 ACAT ACAT ACAT ACAT AGGT
39840 TATG * 5 18/20 TATG CATG TGTG TATG TATG
44511 ATTT * 5 18/20 ATTT TATT ATTT ATTT ATTT
48985 TTTC * 7 26/28 TTTC TTTC TTTC TTTC TTTC ATTC TTTG
55252 ACCA * 5 18/20 ACCA ACCA AACA ACCA ATCA
65290 ATTT * 5 18/20 ATTT ATTT TTTT TTTT ATTT
90535 CCAA * 5 18/20 CCAA CCAA CCTA CCAA TCAA
132436 ATAC * 7 26/28 ATAC ATAC ATAT ATAC ATAC ATAC ATAT
145774 TATG * 5 19/20 TATG TATG TATG TTTG TATG
150803 AAAT * 5 18/20 AAAT AAAT ATAG AAAT AAAT
201685 TATG * 5 18/20 TATG TATG TATG TATG CATC
219445 TCAA * 5 18/20 TCAA TCAA TCAA CCAA CCAA
-----------------------------------------------------------------------------
Total sequence length......................... 234369
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 13
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 ATAC-1 ATTT-2 ACAT-1 ACCA-1 TATG-3 TTTC-1 TCAA-1
CCAA-1 CCAC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7300622|gb|AE003731.1|AE003731 Drosophila melanogaster genomic scaffold 142000013386035 section 56 of 105, complete sequence
Position Repeat Coverage Repeat
6596 CTGG * 5 18/20 CTGG CTGA CTGG CTGG CTGC
45395 TACA * 5 18/20 TACA TACA TACG TACA TACG
76437 TTTA * 5 18/20 TTTA TTTA TTTA TTTA TGTT
78419 AGAT * 6 22/24 AGAT AGAT AGAT AGCT AGAT ATAT
124093 AAAT * 5 19/20 AAAT ATAT AAAT AAAT AAAT
148872 CTAC * 5 19/20 CTAC CTAC CTAC CTAC ATAC
157287 CCAA * 5 18/20 CCAA CCAA CCAA CCAG CCAT
222915 TTGG * 7 26/28 TTGG TTGG TTGG TTGG TTGG CTGG TTGT
-----------------------------------------------------------------------------
Total sequence length......................... 225829
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 8
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 AGAT-1 TACA-1 TTTA-1 TTGG-1 CTAC-1 CTGG-1 CCAA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7300601|gb|AE003730.1|AE003730 Drosophila melanogaster genomic scaffold 142000013386035 section 55 of 105, complete sequence
Position Repeat Coverage Repeat
23144 CTGG * 5 19/20 CTGG CTGG CTGG CTGG CTGC
34614 TACG * 6 22/24 TACG TACG TACG TATA TACG TACG
63600 TAAA * 5 18/20 TAAA AATA TAAA TAAA TAAA
67953 GTGA * 5 18/20 GTGA GTGA GTGA GTGT GTGT
77028 TATT * 5 18/20 TATT TATT TATT TATT TAGG
102784 TTTG * 5 18/20 TTTG TTTG TTTG TTTG TTGC
117596 CAGA * 5 18/20 CAGA CAGA CAGA CAGA CTAA
132883 GACA * 5 18/20 GACA AACA GAAA GACA GACA
139154 TCTG * 7 26/28 TCTG TCTG TCTG TCTG TCTG TCTG TCAC
153562 AGCC * 5 18/20 AGCC ACCC AGCC AGGC AGCC
157181 CAGC * 5 18/20 CAGC CATC CAGC CAGG CAGC
170175 AATT * 5 19/20 AATT AATT AATC AATT AATT
174838 TAAC * 6 22/24 TAAC TAAC TAAC TAAC TAAT TAAT
175251 AGTC * 11 41/44 AGTC AGTC AGTA TGTC AGTC AGTC AGTC AGTC AGTC AGTC AGCC
189632 ACCA * 5 18/20 ACCA ACCA ACCA AACA ACCC
204919 TAAA * 6 22/24 TAAA TAAA TAAA TATA TAAA AAAA
216804 ACAG * 6 22/24 ACAG GCAG ACAG ACAG ACAG ACGG
-----------------------------------------------------------------------------
Total sequence length......................... 221365
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 17
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AATT-1 AGTC-1 AGCC-1 ACAG-1 ACCA-1 TAAA-2 TAAC-1 TATT-1
TACG-1 TTTG-1 TCTG-1 GACA-1 GTGA-1 CAGA-1 CAGC-1 CTGG-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7300591|gb|AE003729.1|AE003729 Drosophila melanogaster genomic scaffold 142000013386035 section 54 of 105, complete sequence
Position Repeat Coverage Repeat
466 TTTA * 5 18/20 TTTA TGTT TTTA TTTA TTTA
36174 CTGC * 5 19/20 CTGC CTGC CTGC CTGC CAGC
96843 AAAT * 5 18/20 AAAT AAAT AAAT AAGA AAAT
108723 TATG * 5 18/20 TATG TATG TATG TGTG TGTG
113120 TGGG * 5 18/20 TGGG TTGG TAGG TGGG TGGG
115827 ATAA * 5 19/20 ATAA ATAA ATAA ATAA ATTA
131930 TTTA * 5 18/20 TTTA TTTA TACA TTTA TTTA
145759 TTGT * 5 18/20 TTGT TCGT TTGT TTGT TTGC
157252 AACT * 5 18/20 AACT AACT AACT AACT CATT
161529 ACAT * 8 29/32 ACAT ACAT ACAT ATAT ATAT ACAT ACAT ATAT
185649 ATAC * 5 18/20 ATAC ATAC ATAC ATAT ATGC
188260 TATG * 5 18/20 TATG CATG TATG TATG TATA
190341 CAGT * 5 19/20 CAGT CATT CAGT CAGT CAGT
190365 CAGT * 6 22/24 CAGT CAGT CAGT TAGT CAGT CATT
190393 CAGT * 5 18/20 CAGT GAGT CAGT CAGC CAGT
190547 GTAC * 6 22/24 GTAC GTAC GTAC GTAC ATAT GTAC
193537 AAAT * 5 18/20 AAAT AACT ATAT AAAT AAAT
211605 AAAC * 5 18/20 AAAC ACAC AAAC AAAC AAGC
229622 TACA * 5 18/20 TACA TACA TACA TAAA TAGA
-----------------------------------------------------------------------------
Total sequence length......................... 230977
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 19
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-2 AAAC-1 AACT-1 ATAA-1 ATAC-1 ACAT-1 TATG-2 TACA-1
TTTA-2 TTGT-1 TGGG-1 GTAC-1 CAGT-3 CTGC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7300549|gb|AE003728.1|AE003728 Drosophila melanogaster genomic scaffold 142000013386035 section 53 of 105, complete sequence
Position Repeat Coverage Repeat
120366 ACAT * 5 18/20 ACAT ATGT ACAT ACAT ACAT
132430 ACTG * 6 22/24 ACTG ACTG ATAG ACTG ACTG ACTG
132467 CTGA * 6 22/24 CTGA CTAA CTGA CTAA CTGA CTGA
166998 GTAT * 5 18/20 GTAT GTAT TTAT GTAT GTAC
-----------------------------------------------------------------------------
Total sequence length......................... 231828
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 4
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ACAT-1 ACTG-1 GTAT-1 CTGA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7300524|gb|AE003727.1|AE003727 Drosophila melanogaster genomic scaffold 142000013386035 section 52 of 105, complete sequence
Position Repeat Coverage Repeat
20368 AATA * 5 18/20 AATA AATA TATA AATA TATA
82702 AATC * 5 19/20 AATC AATC AATC AATC AACC
83728 AAAT * 5 18/20 AAAT AAAA AAAT AAAA AAAT
91612 TGGC * 5 18/20 TGGC TGGG TGGC TGGG TGGC
106768 TGTC * 5 18/20 TGTC TGTC TGTC AGTC TGGC
127222 ATTC * 5 18/20 ATTC GTTC ATTC ATTC ATTT
136106 CCAT * 5 19/20 CCAT CCAT CCAT CCAT CCAA
163324 CCAG * 5 19/20 CCAG CCAG CTAG CCAG CCAG
199430 TAAA * 5 18/20 TAAA TAAA TAAA TAAA TCCA
208106 ATCG * 5 18/20 ATCG ATGG ATCG ATGG ATCG
241106 TATT * 5 18/20 TATT TATT TTTT TATA TATT
-----------------------------------------------------------------------------
Total sequence length......................... 242709
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 11
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 AATA-1 AATC-1 ATTC-1 ATCG-1 TAAA-1 TATT-1 TGTC-1
TGGC-1 CCAT-1 CCAG-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7300503|gb|AE003726.1|AE003726 Drosophila melanogaster genomic scaffold 142000013386035 section 51 of 105, complete sequence
Position Repeat Coverage Repeat
1477 ACAA * 5 18/20 ACAA ACAA ACCA GCAA ACAA
8603 TTAA * 5 18/20 TTAA TGAA TTAA TTAA TGAA
63646 TTTA * 7 27/28 TTTA TTTA TTTA TTAA TTTA TTTA TTTA
88437 ATAC * 5 18/20 ATAC ATAT ATAC ATAC CTAC
96899 CTGA * 7 26/28 CTGA CGGA CTGA CTGC CTGA CTGA CTGA
112624 GTAT * 7 27/28 GTAT GTAC GTAT GTAT GTAT GTAT GTAT
113735 AATG * 5 18/20 AATG TATG AATG AATG AATT
114827 TACA * 5 18/20 TACA TACA TATA TACA TTCA
115040 AAAT * 5 18/20 AAAT ATAT AAAT AAAT AAAA
138440 TTTA * 5 18/20 TTTA TTTT TTTA TTTA TTTT
143926 CTCG * 5 18/20 CTCG CTCT CTCA CTCG CTCG
168541 TGAT * 6 23/24 TGAT TGAT TGAT TGAT TGAC TGAT
183547 GGCT * 7 26/28 GGCT GACT GGCT GGCT GGCT GGCT AGCT
198251 TGAT * 6 22/24 TGAT TGAT TGAT TGAT TGAT TAAA
-----------------------------------------------------------------------------
Total sequence length......................... 239525
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 14
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 AATG-1 ATAC-1 ACAA-1 TACA-1 TTAA-1 TTTA-2 TGAT-2
GTAT-1 GGCT-1 CTGA-1 CTCG-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7300476|gb|AE003725.1|AE003725 Drosophila melanogaster genomic scaffold 142000013386035 section 50 of 105, complete sequence
Position Repeat Coverage Repeat
1923 AAAT * 5 18/20 AAAT AAAT AAAT AAGC AAAT
6507 TAAA * 5 18/20 TAAA TAAA TAAA TAAC TCAA
7200 TATG * 5 18/20 TATG TATG AATG TATG TATA
14663 TATC * 5 18/20 TATC TATC TATC TATA TATA
88696 ATAC * 5 19/20 ATAC ATAC ATAC ATAC GTAC
91523 AGAT * 6 22/24 AGAT AGAT AGAT AAAT AGAC AGAT
106401 ACAT * 6 23/24 ACAT ACAT ACAT ACAC ACAT ACAT
174518 TGAC * 5 18/20 TGAC TGAC TGAC AGAC GGAC
180914 GGCT * 6 23/24 GGCT GGCT GGCT GGCT GGCT GGCG
187677 TTTA * 5 18/20 TTTA TTTA TTTA ATTA TTTT
207187 ATGA * 5 19/20 ATGA ATGA ATGG ATGA ATGA
210946 TGTT * 7 27/28 TGTT TGTT TGTT TGTT TGTT TGTT TGTG
214370 GCAG * 5 18/20 GCAG GCAG GCAG GCAC GCAC
220575 AAAT * 5 19/20 AAAT AAAT AAAT AAAT AAAA
221214 CAGA * 6 22/24 CAGA CAGT CAGA CACA CAGA CAGA
226710 TGAC * 5 18/20 TGAC TGAC TGAA TGAG TGAC
230881 TTCA * 8 29/32 TTCA TTCA TTCA TTCA TTCA TTCA CTCA CTCG
243562 GACT * 5 19/20 GACT GACT GACT GACT GCCT
251003 ATGT * 5 18/20 ATGT ATGT ATGT ATTT ATGG
-----------------------------------------------------------------------------
Total sequence length......................... 254846
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 19
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-2 ATAC-1 ATGA-1 ATGT-1 AGAT-1 ACAT-1 TAAA-1 TATG-1
TATC-1 TTTA-1 TTCA-1 TGAC-2 TGTT-1 GACT-1 GGCT-1 GCAG-1
CAGA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7300442|gb|AE003724.1|AE003724 Drosophila melanogaster genomic scaffold 142000013386035 section 49 of 105, complete sequence
Position Repeat Coverage Repeat
1829 TTCT * 6 22/24 TTCT TTCT TTCT TTCT ATCT TTAT
18985 TGAA * 5 18/20 TGAA TGAA TGAG TGAA TGAT
25564 GTCA * 8 29/32 GTCA CTCA GGCA GTCA GTCA GTCA GTCA CTCA
25597 TCAG * 5 18/20 TCAG TCAT TCAG TCAT TCAG
33905 TGTA * 5 18/20 TGTA TATA TGTA TGTG TGTA
45005 CAGC * 7 26/28 CAGC CAGC CAGC CAGC CAGC CAGG CAGT
54961 ATAC * 5 18/20 ATAC ATAC ATGC ATAC GTAC
55270 CATA * 6 23/24 CATA CATA CATA CATA CATA CAGA
59823 ACAT * 5 18/20 ACAT ACAT ACAT ATGT ACAT
71907 ATTC * 5 18/20 ATTC ATTC ATCC ATTC ATGC
72937 CACG * 5 18/20 CACG CACG CACG CACA CACA
75901 TTCG * 6 23/24 TTCG TTCG TTCG TTCG TTTG TTCG
79732 TGGC * 5 18/20 TGGC AGGC TGGC TGAC TGGC
84033 CAGC * 5 18/20 CAGC CAGC CAAC CATC CAGC
106114 GATA * 6 23/24 GATA GATA GATA GATA GATA GATG
127355 CGTT * 8 30/32 CGTT CGTT CGTT CGTT TGTT CCTT CGTT CGTT
152716 TATG * 5 19/20 TATG TATG TATG TATG TACG
173667 ATTT * 5 18/20 ATTT AGTT ATTT ATTT ATGT
196202 CTAA * 8 30/32 CTAA CTAA CTAA CTAA CTAA CTAA CTAA CTGT
198109 TACA * 6 23/24 TACA TACA TACA TACA TACA TATA
199922 TACA * 5 18/20 TACA TACA TACA TATA TATA
199976 GGAT * 8 29/32 GGAT GGAT GGAT GGCT GGAT GGCT GGAT AGAT
201425 GGTC * 5 18/20 GGTC GGTT GGTC GGTC GGTT
208261 GCCA * 8 29/32 GCCA GCCA GCCA GCCA ACCA GCCA GCCA GGCC
220015 GCTG * 5 18/20 GCTG GCTG GCTG GCTG CCTT
-----------------------------------------------------------------------------
Total sequence length......................... 232361
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 25
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATAC-1 ATTT-1 ATTC-1 ACAT-1 TATG-1 TACA-2 TTCT-1 TTCG-1
TGAA-1 TGTA-1 TGGC-1 TCAG-1 GATA-1 GTCA-1 GGAT-1 GGTC-1
GCTG-1 GCCA-1 CATA-1 CAGC-2 CACG-1 CTAA-1 CGTT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7300414|gb|AE003723.1|AE003723 Drosophila melanogaster genomic scaffold 142000013386035 section 48 of 105, complete sequence
Position Repeat Coverage Repeat
10464 TGTA * 5 18/20 TGTA TATA TGTA TGTA TGCA
27534 GTCG * 6 22/24 GTCG GTCG CTCG GTCG GTCT GTCG
31245 GACC * 7 26/28 GACC GACC GACC GACC GACC GACA GACA
32483 TGTT * 8 29/32 TGTT TGTT TGTT TGTT TATT TGTT GGTT GGTT
34716 TATG * 6 22/24 TATG TACA TATG TATG TATG TATG
76878 AACT * 5 18/20 AACT AACT AACT AACA AACC
96809 ACAA * 5 18/20 ACAA ACAA ACAA ACAA AGCA
107384 ATAC * 5 18/20 ATAC ATAC ATAC ATAT ATAT
118287 CAAG * 5 18/20 CAAG TAAG CAAG CAAG CAAT
124178 AAAT * 5 18/20 AAAT AAAT AAAT AAAT AATG
124225 TTAA * 5 18/20 TTAA TAAA TTAA TTAA ATAA
177327 GTTG * 5 18/20 GTTG GTTG GTTG GCTG GCTG
183577 TATG * 5 18/20 TATG TATG TATG TATG TACA
196109 GACT * 9 33/36 GACT GAAT GGCT GACT GACT GACT GACT GCCT GACT
208686 TGGT * 6 22/24 TGGT GGGT GGGT TGGT TGGT TGGT
226133 TGAC * 5 18/20 TGAC TGAC TGAC TCAC TGAG
232929 AAAT * 5 19/20 AAAT AAAT AAAT AAAT AAAC
237895 GTCA * 7 26/28 GTCA GTCA GTCA TTCA GTCA GTCA GTCG
247566 TTTA * 5 18/20 TTTA TTTA TTTA TTCA TTTT
-----------------------------------------------------------------------------
Total sequence length......................... 253747
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 19
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-2 AACT-1 ATAC-1 ACAA-1 TATG-2 TTAA-1 TTTA-1 TGAC-1
TGTA-1 TGTT-1 TGGT-1 GACT-1 GACC-1 GTTG-1 GTCA-1 GTCG-1
CAAG-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7300390|gb|AE003722.1|AE003722 Drosophila melanogaster genomic scaffold 142000013386035 section 47 of 105, complete sequence
Position Repeat Coverage Repeat
29019 TTGT * 5 18/20 TTGT TTGT TTTT TTTT TTGT
33345 TGTC * 6 23/24 TGTC TGTC TGTC TGTC TGTC TGTG
42734 AATC * 5 18/20 AATC AATC AATC AATC AACA
47718 TTGT * 5 19/20 TTGT TTGT TTGT TTGT TTGC
47738 CTGC * 5 18/20 CTGC CCGC CCGC CTGC CTGC
59051 ATAA * 6 23/24 ATAA ATAC ATAA ATAA ATAA ATAA
60379 GTAT * 5 18/20 GTAT GTAT GTAT GTAT ATAG
61539 ATTT * 5 18/20 ATTT ATTT ATTT TTTT AATT
64720 GTAT * 5 18/20 GTAT GTAT GTAT GTAC ATAT
71133 GACT * 8 29/32 GACT GACT GACG AACT GACT GACT GACT GAGT
75061 CTGG * 6 22/24 CTGG CTGG CTGG CTGG CTAG CTGT
81674 ATAC * 5 18/20 ATAC ATAC ATAC ATAT GTAC
89858 CATA * 5 19/20 CATA CCTA CATA CATA CATA
112626 CTGA * 6 22/24 CTGA CTGA CTGA ATGA CTGA CTGG
147707 CCAG * 5 18/20 CCAG CCAG CCAG ACAG ACAG
206267 TATG * 5 18/20 TATG TATA TATG TATG CATG
-----------------------------------------------------------------------------
Total sequence length......................... 222917
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 16
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AATC-1 ATAA-1 ATAC-1 ATTT-1 TATG-1 TTGT-2 TGTC-1 GACT-1
GTAT-2 CATA-1 CTGA-1 CTGG-1 CTGC-1 CCAG-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7300335|gb|AE003721.1|AE003721 Drosophila melanogaster genomic scaffold 142000013386035 section 46 of 105, complete sequence
Position Repeat Coverage Repeat
9574 CACT * 5 18/20 CACT CCCT CACT CACT CTCT
32634 GGTT * 5 20/20 GGTT GGTT GGTT GGTT GGTT
37486 GGTT * 5 18/20 GGTT GGGT GGGT GGTT GGTT
72564 GTCT * 5 18/20 GTCT GTCT GTCT GTCT TTCC
99521 GGCT * 5 18/20 GGCT GGCT GGCT AACT GGCT
150599 AATA * 5 18/20 AATA AATA CATA ACTA AATA
155487 ATTT * 5 18/20 ATTT ATTT ATTA ATTT ATTG
160371 CATA * 5 18/20 CATA CACA TATA CATA CATA
175737 TATG * 5 18/20 TATG TATG TATC TATG AATG
183499 CAAA * 5 19/20 CAAA CTAA CAAA CAAA CAAA
-----------------------------------------------------------------------------
Total sequence length......................... 224896
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 10
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AATA-1 ATTT-1 TATG-1 GTCT-1 GGTT-2 GGCT-1 CAAA-1 CATA-1
CACT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7300322|gb|AE003720.1|AE003720 Drosophila melanogaster genomic scaffold 142000013386035 section 45 of 105, complete sequence
Position Repeat Coverage Repeat
19475 GTTG * 6 22/24 GTTG GTTG GTTG GTTG GTAG GTAG
20614 TCCA * 6 22/24 TCCA CCCA TCCA TCCA TCCA TCAA
25097 TCTG * 5 18/20 TCTG TCTG TCTG TGTA TCTG
28438 TTTG * 5 18/20 TTTG TTTG TTTG TTTG TTCT
45562 ACAT * 7 26/28 ACAT ACAT ACAT ACAT ACAT ACAT ATAC
56250 CAAA * 6 22/24 CAAA CAAA CAAA CAAA CAAA CGCA
70535 AACA * 5 19/20 AACA AGCA AACA AACA AACA
91372 TGGG * 5 19/20 TGGG TGGG TGGG TAGG TGGG
94017 TATG * 5 20/20 TATG TATG TATG TATG TATG
106568 ACTG * 5 18/20 ACTG ACCA ACTG ACTG ACTG
106661 CAGC * 11 40/44 CAGC CAGC CAGC CAGC CAGC CAGC CAGC CAGC AGGC AATC CAGC
114588 CCAT * 8 29/32 CCAT CCAG CCAT CCAT CCAT CCAT CCAT CCCC
143129 CATA * 5 18/20 CATA CATA TACA CATA CATA
152074 TGAA * 5 19/20 TGAA TGAA TGAA TGAA TGAG
152098 TGAC * 5 18/20 TGAC TGAA TGAG TGAC TGAC
153545 TATG * 5 18/20 TATG TATG TACA TATG TATG
171728 TTCA * 6 23/24 TTCA TTCA TTCA TTCA TTCA TTTA
182282 GACA * 5 18/20 GACA GGCA GACA GACA GATA
182339 TGTT * 5 18/20 TGTT TGTT TGTT ACTT TGTT
183281 CAGT * 5 19/20 CAGT CAGT CAGT CAGT CAGC
198310 ATAA * 5 18/20 ATAA ATAA AAAA ATAA AAAA
202861 CATA * 5 18/20 CATA CATA CATA CGTA TATA
206634 TGGT * 12 44/48 TGGT CGGT CGGT TGGT TGGT TGGT TGGT TGGT TGGT CGGT TGGT CGGT
210387 GGCT * 5 18/20 GGCT GGCT GACT GGCT GCCT
220648 TACA * 6 22/24 TACA TACA TACA TATG TACA TACA
-----------------------------------------------------------------------------
Total sequence length......................... 224263
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 25
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AACA-1 ATAA-1 ACAT-1 ACTG-1 TATG-2 TACA-1 TTTG-1 TTCA-1
TGAA-1 TGAC-1 TGTT-1 TGGT-1 TGGG-1 TCTG-1 TCCA-1 GACA-1
GTTG-1 GGCT-1 CAAA-1 CATA-2 CAGT-1 CAGC-1 CCAT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7300296|gb|AE003719.1|AE003719 Drosophila melanogaster genomic scaffold 142000013386035 section 44 of 105, complete sequence
Position Repeat Coverage Repeat
10672 CGAC * 5 18/20 CGAC CGAC CGAC TGAC TGAC
45378 TAAA * 5 20/20 TAAA TAAA TAAA TAAA TAAA
69378 GTCA * 10 36/40 GTCA GTCA GTCA GTCG GTTA GTCA GTCA GTTA GTCA GCCA
72930 GCTG * 5 19/20 GCTG GCTG GCTT GCTG GCTG
94832 TGGA * 6 22/24 TGGA TGGA TCGA TGGG TGGA TGGA
96546 TGAC * 6 22/24 TGAC TGAC TGAC TGAA TGAC TGGC
96607 GACT * 8 29/32 GACT AACT GACT GACT AACT GACT GACT GACG
121656 ATCA * 5 18/20 ATCA ATCA ACCC ATCA ATCA
141299 CAGG * 9 33/36 CAGG CAGG CAGG CAGG CAGG CAGG CAGG CAGG ACGA
141463 CTGA * 5 18/20 CTGA CTGA CTAA CTGA GTGA
162825 TGAT * 6 23/24 TGAT TGAT TGAT TGAT TGAT TGAC
170944 GTTG * 6 22/24 GTTG GTTG TTTA GTTG GTTG GTTG
190486 GTTT * 6 22/24 GTTT GTTT GTTG GTTT GTTG GTTT
205700 TGAC * 5 18/20 TGAC TGAC TGAC TGCT TGAC
206136 AGCC * 6 22/24 AGCC AGCC AGCC AGCA AGCC AGTC
-----------------------------------------------------------------------------
Total sequence length......................... 218434
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 15
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATCA-1 AGCC-1 TAAA-1 TGAT-1 TGAC-2 TGGA-1 GACT-1 GTTT-1
GTTG-1 GTCA-1 GCTG-1 CAGG-1 CTGA-1 CGAC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7300262|gb|AE003718.1|AE003718 Drosophila melanogaster genomic scaffold 142000013386035 section 43 of 105, complete sequence
Position Repeat Coverage Repeat
2127 GTCC * 5 18/20 GTCC GTCC GTCC GTCC AACC
21747 TAAA * 5 18/20 TAAA TAAA TAAA TAAA TTTA
23702 CTGT * 8 29/32 CTGT CTCT TTGT CTGT CTGT CTGT CTGT CTGA
50394 CAAA * 5 18/20 CAAA CAAA AACA CAAA CAAA
59650 AAAT * 5 18/20 AAAT AAAT ACAA AAAT AAAT
65027 ATTT * 5 18/20 ATTT GTTT TTTT ATTT ATTT
76405 TTAA * 5 18/20 TTAA TTAA TTAA TTAA CTCA
84358 CATC * 8 29/32 CATC CATC CATC CACC CATC CATA CATC CAGC
90475 TGTC * 5 18/20 TGTC TGTC TGTC TGTG TGTG
175964 TGTT * 5 19/20 TGTT TGTT TGTT TGCT TGTT
177326 TACA * 6 22/24 TACA TACA TACA TACA TACA TATC
191842 TGTC * 5 18/20 TGTC CGTC TGTC TGTC CGTC
223363 ATTT * 5 18/20 ATTT ATTT ATAT ATAT ATTT
234938 AACG * 7 26/28 AACG AACG AACG AACG AGCG AGCG AACG
235635 AGCA * 7 26/28 AGCA AGCA AGCA AGCA AGCA AGCT GGCA
240739 AAAC * 5 18/20 AAAC AAAC AAAC AAAA AAAA
247512 CAAA * 5 18/20 CAAA CAAT CAAA CAAA CACA
251563 CTCG * 5 18/20 CTCG CTCG CTCG CTCA CTCT
----------