Mono-Nucleotide Repeats in Genomic Sequences
Mono-Nucleotide Repeats in
Drosophila melanogaster Chromosome-Arm-3L Genomic Scaffolds
Genomic Sequence:
gi|7316100|gb|AE002584.1|AE002584 Drosophila melanogaster genomic scaffold 142000013386045, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 0
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7292550|gb|AE003483.1|AE003483 Drosophila melanogaster genomic scaffold 142000013386045 section 17 of 17, complete sequence
Position Repeat-length Repeat
9316 18/20 TTTTTTTTTTTCGTTTTTTT
24735 18/20 TTTTTTTTTTTGTTTTTTTA
63504 23/25 TTTTTTTTTTTTTTTTTTTGTTTCT
64791 18/20 TTTTTCTTTTTTTTTTTGTT
77462 21/23 AAAAAAAAAAAAAAAAAAAAATG
95453 20/22 AAAAAGAAAAAATAAAAAAAAA
95825 18/20 TTTTTTTTTTTTAATTTTTT
99396 23/25 TTTTTAGTTTTTTTTTTTTTTTTTT
121099 28/31 AAAAATTAAAAAAAAAAAAAAAAAAAAAAAC
133065 21/23 AAAAAAAAAAAAAATAAGAAAAA
135572 19/21 AAAAAAATAAAAAAATAAAAA
136589 20/22 TTTTTTTTTTTTTTTTTTTGTC
158320 18/20 AAAAAAAAAAAAAGAAAAAC
160574 20/22 AAAAAAAAAAAAAAAAAAATAG
----------------------------------------------------------------------------
Total sequence length......................... 175489
Total number of repeats detected.............. 14
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 6 7 0 0
30 to 39 1 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 7 7 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7292521|gb|AE003482.1|AE003482 Drosophila melanogaster genomic scaffold 142000013386045 section 16 of 17, complete sequence
Position Repeat-length Repeat
11580 20/22 TTTTTTCATTTTTTTTTTTTTT
14918 18/20 TTTTTTCTTTTTTTTTTTTG
22125 19/21 AAAAAAAAAACAAAACAAAAA
31306 18/20 AAAAAAAAAAAAAAACAAAT
34105 19/21 TTTTTTTTTTTTTTTTTTGTG
58608 21/23 GGGGGGGGGGGGGGGGGGGGTGA
80284 20/22 TTTTTTTTTTTTTGTTTTGTTT
92935 18/20 TTTTTTATTTTTTTTTTGTT
130192 18/20 TTTTTTTTTTTATTTTTTTC
173882 18/20 AAAAAAAAAAAAAACTAAAA
230289 23/25 AAAAAAAAAAAAAAAAAAAAAGGAA
280979 18/20 TTTTTTTTTTTAATTTTTTT
290602 23/25 AAAAAAAAAAAAAAAAAAAAGAAGA
----------------------------------------------------------------------------
Total sequence length......................... 301682
Total number of repeats detected.............. 13
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 5 7 1 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 5 7 1 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7292481|gb|AE003481.1|AE003481 Drosophila melanogaster genomic scaffold 142000013386045 section 15 of 17, complete sequence
Position Repeat-length Repeat
46561 18/20 AAAAAAGTAAAAAAAAAAAA
50111 20/22 AAAAAAAAAAAAAAAACAACAA
53791 20/22 AAAAAACAAAAAAAAAAATAAA
57039 18/20 TTTTTGTTTTTTTTTTTTTC
80226 18/20 CCCCCCCCCCCCCCCCGCCG
82403 22/24 TTTTTTTTTTTTTTTTTTTTTATA
114300 18/20 AAAAAAAAAAAAAAAATATA
116513 20/22 AAAAAAAAAAAAAAAAAAACAT
122587 19/21 TTTTTTTTTTTTTTTGTTATT
123861 23/25 AAAAAAAAAAAAAAAAAAAAAGAAC
216100 20/22 AAAAAAACAAAAAAAAAATAAA
228859 19/21 AAAAAAAAAACAAAAACAAAA
236475 19/21 TTTTTTTTTTTTGTTTTTTAT
256780 20/22 AAAAAAAAAAAAGAAAAAACAA
279861 22/24 AAAAAAAAAAAAAAAAAAAAATAC
308783 19/21 AAAAAAAAAATAAATAAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 319765
Total number of repeats detected.............. 16
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 11 4 0 1
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 11 4 0 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7292415|gb|AE003480.1|AE003480 Drosophila melanogaster genomic scaffold 142000013386045 section 14 of 17, complete sequence
Position Repeat-length Repeat
51556 18/20 TTTTTTTTTGTTTTTTTATT
95244 18/20 AAAAAACAAAAAAAAAAACA
170290 20/22 AAAAAAAAAAAAAAAATGAAAA
175777 24/26 AAAAAAAAAAAAAAAAAAAGAAACAA
185947 21/23 TTTTTTGTTTTTTTTTTGTTTTT
228581 22/24 TTTTTTTTTGATTTTTTTTTTTTT
269801 22/24 TTTTTTCTTTTTTTTTTTTTTGTT
----------------------------------------------------------------------------
Total sequence length......................... 310450
Total number of repeats detected.............. 7
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 3 4 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 3 4 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7292381|gb|AE003479.1|AE003479 Drosophila melanogaster genomic scaffold 142000013386045 section 13 of 17, complete sequence
Position Repeat-length Repeat
23303 21/23 TTTTTTTTTTTTTTTTTTTTGGT
29964 26/28 TTTTTTTGTTTTGTTTTTTTTTTTTTTT
31148 23/25 TTTTTTTTTTTTTTTTTTAATTTTT
35187 18/20 AAAAAAACAAAAAAAAAAAC
50289 19/21 AAAAAAATAAAAAAATAAAAA
59842 21/23 TTTTTTTTTTTTTTTTTATTTCT
63527 20/22 AAAAAACTAAAAAAAAAAAAAA
86651 18/20 TTTTTTTTTTGTTTTTTCTT
90652 19/21 AAAAAAAGAAAAAAGAAAAAA
93249 21/23 TTTTTTTTTTTTTTTTTTTGTTA
104061 19/21 TTTTTATTTTTTATTTTTTTT
147744 19/21 AAAAAAAAAAAAAAAACGAAA
155913 22/24 AAAAAAAAAAAAAAAGAAACAAAA
161015 18/20 TTTTTTTTTTTTTGTTTTGT
162845 22/24 AAAAAAAAAAAAAAAAAAAGAAAT
169977 22/24 AAAAAAAAAAAAAAAAAAAAAACT
226261 24/26 AAAAAAAAAAAGAAGAAAAAAAAAAA
247441 24/26 TTTTTTTCTTTTTTTTTTTTTTTTTG
266633 18/20 TTTTTTCTTTTTTTTTTTCT
270460 21/23 TTTTTTTTTTTTTGTTTTGTTTT
286488 24/26 AAAAAAAAAAAAACAAAAAACAAAAA
302334 21/23 AAAAAAAAAAAAGAAAACAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 309883
Total number of repeats detected.............. 22
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 11 11 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 11 11 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7292360|gb|AE003478.1|AE003478 Drosophila melanogaster genomic scaffold 142000013386045 section 12 of 17, complete sequence
Position Repeat-length Repeat
19307 25/27 TTTTTTTTATTTTTTTTTTTATTTTTT
36940 21/23 TTTTTTTGTTTTTTTTTTTTTTG
43578 19/21 TTTTTTTTTATTTTTTTTTTG
54184 21/23 AAAAAAAAAAAAAAAAATTAAAA
65606 19/21 TTTTTTTTTTGTTTTTTTTTG
68243 21/23 AAAAAAAAAAAAAAAAAATACAA
68272 18/20 AAAAAAAAAAAACAAAGAAA
77754 20/22 TTTTTTTTTTTTTTTCGTTTTT
79486 19/21 TTTTTATTTATTTTTTTTTTT
86010 18/20 AAAAACAAAAAAAAAAAAAT
106728 38/42 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTT
116826 19/21 AAAAAAAAAAAAAAAAAAATG
146130 18/20 AAAAAAAAAAAAAAAAAACT
167725 24/26 AAAAAAAAAAAAAAAAAAAAGAAATA
175549 18/20 AAAAAGAAAAAAAAAAACAA
196915 21/23 AAAAAAAAAAAAAAAAAAATAAT
217457 19/21 TTTTTTTTTTTGTTTTTGTTT
249129 20/22 TTTTTTTTTTTTTTTGGTTTTT
263528 18/20 AAAAAAAAAAATAAATAAAA
315274 20/22 TTTTTTTTATTTATTTTTTTTT
----------------------------------------------------------------------------
Total sequence length......................... 317218
Total number of repeats detected.............. 20
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 10 9 0 0
30 to 39 0 0 0 0
40 to 49 1 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 11 9 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7292303|gb|AE003477.1|AE003477 Drosophila melanogaster genomic scaffold 142000013386045 section 11 of 17, complete sequence
Position Repeat-length Repeat
24536 18/20 AAAAAAAAAAACAAGAAAAA
25959 20/22 AAAAAAAAAAGAAAAAAAAATA
41966 23/25 TTTTTTTTATTTATTTTTTTTTTTT
71419 18/20 CCCCCCCCCCCCCCCCTTCC
74886 19/21 AAAAAAGAAAAAAAAAAAATA
179342 22/24 AAAAAAAGAAAAAAAAAAAACAAA
203811 19/21 AAAAAAAAAAAAAAAAAATAG
217932 28/31 AAAAATTAAAAAAAAAAAAAAAAAAAAAAAT
277833 24/26 TTTTTGTTTTTTTTTTTTGTTTTTTT
278756 18/20 TTTTTTTTTTCTTTTCTTTT
279331 21/23 AAAAAAAAAAATAAAAAACAAAA
284038 19/21 AAAAAAAAAAAAAAAAAACAT
----------------------------------------------------------------------------
Total sequence length......................... 304734
Total number of repeats detected.............. 12
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 7 3 0 1
30 to 39 1 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 8 3 0 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7292275|gb|AE003476.1|AE003476 Drosophila melanogaster genomic scaffold 142000013386045 section 10 of 17, complete sequence
Position Repeat-length Repeat
48246 18/20 TTTTTTTTTTTTATTATTTT
51607 24/26 AAAAAAACAAAAAAAAAAAAACAAAA
69858 20/22 AAAAAAAAAAAAAACAAAAAAT
75176 20/22 TTTTTTTTTTTTTTATTATTTT
79483 23/25 AAAAAAAAAAAAAAAATAAAAGAAA
80852 18/20 AAAAAAAAAACAAAACAAAA
84463 18/20 AAAAAAAAAAAACAAAATAA
97308 18/20 AAAAAAAAAAAAAAAAAATC
101346 22/24 TTTTTATTTTTTTATTTTTTTTTT
110715 22/24 TTTTTTTTTTTTTTTTTTTGTTTC
116028 18/20 AAAAAAAAAAAAAATAATAA
124002 22/24 AAAAAAAAAAAAAAAAAAAAATGA
124511 19/21 TTTTTTTTTTTTTTTTTAGTT
147218 18/20 TTTTTTTTTTTGTATTTTTT
160462 19/21 TTTTTTTTTTTTTTTTCTTTG
165075 23/25 AAAAAAAAAAAAGAAAAAAAAAACA
248280 20/22 TTTTTCTTTTTTTTTTTTTTGT
293181 18/20 AAAAAAAAGAAAAAAACAAA
301586 18/20 TTTTTTGTTTTTTGTTTTTT
----------------------------------------------------------------------------
Total sequence length......................... 306945
Total number of repeats detected.............. 19
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 10 9 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 10 9 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7292236|gb|AE003475.1|AE003475 Drosophila melanogaster genomic scaffold 142000013386045 section 9 of 17, complete sequence
Position Repeat-length Repeat
8634 20/22 AAAAAAAAAATAAAAAAAACAA
67298 33/36 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGA
110111 18/20 TTTTTTTTTTTTTTTTTAAT
110945 18/20 AAAAAAAAAAAAAATCAAAA
119278 18/20 TTTTTTTTTTTTTTTTTTGA
122146 22/24 AAAAAAAAAAAAAAAAAAAAACAC
124216 21/23 AAAAAAAAGAAAAGAAAAAAAAA
126408 18/20 AAAAAAAAAAAAAAAAAACT
177993 22/24 AAAAAAAAAACCAAAAAAAAAAAA
204490 19/21 GGGGGGGGGGGGGGTGTGGGG
260116 21/23 AAAAAAAAAAAACAAAAAAAAAG
284178 22/24 AAAAAAAAAAAAAAAAAAAACGAA
295832 19/21 AAAAAAAAAAAAAAAACAAAG
302910 28/31 AAAAAAAAAAAAAAAAAAAAAAAAAAATGTA
303324 21/23 TTTTTTTTTTTTCTTTTTTTTTG
----------------------------------------------------------------------------
Total sequence length......................... 304231
Total number of repeats detected.............. 15
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 9 3 1 0
30 to 39 2 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 11 3 1 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7292198|gb|AE003474.1|AE003474 Drosophila melanogaster genomic scaffold 142000013386045 section 8 of 17, complete sequence
Position Repeat-length Repeat
9576 29/32 TTTTTTTTTGTTTTTTTTTTTTTTTTTTTTGG
60533 23/25 TTTTTTTTTTTTTTTTTTTTTTTGC
75493 19/21 TTTTTTCTTTTTTTTTTTGTT
192093 22/24 AAAAAAAAAAAAAAAAAAAAGGAA
192368 23/25 TTTTTTTTTTTTTTATTATTTTTTT
204071 23/25 AAAAAAAAAAAAAAAAAAAAAAACG
237675 29/32 TTTTTTTTTTTTTTTTTTTTTTTTGTTTCGTT
248578 18/20 AAAAAAAAATAAAAAAGAAA
268718 23/25 TTTTTTTTTTTTTTTTTTTTTTTGA
269101 20/22 AAAAACTAAAAAAAAAAAAAAA
275167 19/21 CCCCCCCCCCCCCCTCCACCC
281657 26/28 AAAAATAACAAAAAAAAAAAAAAAAAAA
283231 19/21 AAAAACAAAAAAAAAAAAGAA
286016 29/32 TTTTTTTTTTTTGTTTTTTTTTTTTGTTTTTA
306457 18/20 AAAAATAACAAAAAAAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 306364
Total number of repeats detected.............. 15
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 7 4 0 1
30 to 39 0 3 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 7 7 0 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7292168|gb|AE003473.1|AE003473 Drosophila melanogaster genomic scaffold 142000013386045 section 7 of 17, complete sequence
Position Repeat-length Repeat
2547 20/22 TTTTTTTTTATTATTTTTTTTT
5656 22/24 CCCCCCCCCCCCCCCCCCCCCTCT
22787 18/20 TTTTTTTTTTTGTTTTTTTA
23560 20/22 TTTTTTGTTTTTGTTTTTTTTT
60611 19/21 AAAAAGACAAAAAAAAAAAAA
61193 18/20 AAAAAAACAAAAAACAAAAA
150965 20/22 TTTTTTTTTTTTTTTTTTTGTG
155651 18/20 AAAAAAAAAACAAAAAAACA
156183 19/21 AAAAAAAAAAAAAAAAGAAAG
165722 19/21 TTTTTTGTTTTTTTTTTTTTG
190587 24/26 AAAAAAAAAAAAAAAAAAAAAAAATT
191606 24/26 AAAAAAAAAAAACAAAAAAAAACAAA
192946 21/23 TTTTTTTTCTTTTTTTTTTTTGT
259731 21/23 TTTTTATTTTTTTTTTTTTTTTG
286953 19/21 TTTTTTGTTTTTTTTTTGTTT
----------------------------------------------------------------------------
Total sequence length......................... 304106
Total number of repeats detected.............. 15
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 6 8 0 1
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 6 8 0 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7292093|gb|AE003472.1|AE003472 Drosophila melanogaster genomic scaffold 142000013386045 section 6 of 17, complete sequence
Position Repeat-length Repeat
47538 21/23 AAAAAAAAAAAAAAAACAGAAAA
49079 18/20 AAAAAAACAAAAAAAAAAAC
65623 22/24 AAAAAAAAAAAAAACAAAAAGAAA
74810 24/26 AAAAAAAAAAAAACAAAAAAAAAACA
145896 18/20 TTTTTTATATTTTTTTTTTT
155529 19/21 TTTTTTTTTTTTTTTTGTTTA
185769 18/20 AAAAAAAAAAACAAACAAAA
259296 18/20 AAAAAAAAAAAAAAAACAAC
----------------------------------------------------------------------------
Total sequence length......................... 303191
Total number of repeats detected.............. 8
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 6 2 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 6 2 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7292041|gb|AE003471.1|AE003471 Drosophila melanogaster genomic scaffold 142000013386045 section 5 of 17, complete sequence
Position Repeat-length Repeat
27755 21/23 TTTTTTTTTTTTGTTTTGTTTTT
67717 21/23 TTTTTTTTTTTTTGTTTTGTTTT
138646 19/21 AAAAAAAAAAAATGAAAAAAA
154226 20/22 AAAAAAAAAAAAAAAAAACACA
196381 28/31 AAAAAAAAAAAAAAAAAAAAAAAAAAACATC
207544 21/23 TTTTTTTTTTTTTTTACTTTTTT
214397 18/20 TTTTTTTTTTTTTTATGTTT
218303 24/26 AAAAAAAAAAAAAAAAAAAAAAAGAC
220474 18/20 TTTTTTTTTTTTTTTTTTAA
223057 19/21 TTTTTGTTTTGTTTTTTTTTT
232487 20/22 TTTTTTCTTTTTTTTATTTTTT
235216 23/25 AAAAAAAAAAAACAAAACAAAAAAA
248354 24/26 AAAAAAAAAAAAAAAAAAAAACAGAA
273274 22/24 AAAAAAAAAAAAAAAAAATATAAA
273463 25/27 AAAAAAAAAAAAAAAAAAACCAAAAAA
273545 23/25 AAAAAAAAAAAATAAATAAAAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 301109
Total number of repeats detected.............. 16
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 8 7 0 0
30 to 39 1 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 9 7 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7292017|gb|AE003470.1|AE003470 Drosophila melanogaster genomic scaffold 142000013386045 section 4 of 17, complete sequence
Position Repeat-length Repeat
925 27/30 AAAAAAAAAAAAAAAAAAAAAAAAAAACCC
15932 21/23 TTTTTATTTTTTTTTTTTTTTTG
18132 19/21 TTTTTTTTTTTTTTTTTTGGT
22664 29/32 TTTTTTTTTTCTGTTTTTTTTTTTTTTTTTTG
34474 21/23 GGGGGGGGGGGGGGGGGGGTGCG
51518 20/22 AAAAAAAAAAAAAAAAACAGAA
78024 22/24 AAAAACAAAAAAAAACAAAAAAAA
98851 20/22 TTTTTTTTTTTTTTTTTTTTGA
106388 18/20 TTTTTATTTTTTTTTTTTTC
131310 22/24 AAAAAAAAAAAAAACAAAACAAAA
136750 19/21 AAAAAAAAAAAAAGAAAAACA
155068 27/30 TTTTTTGTTTTTTTTTTTTTTTTTTTTTGG
201582 19/21 AAAAAAAAAAAGAAAAGAAAA
224096 59/65 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCATCTT
233730 20/22 TTTTTTGTTATTTTTTTTTTTT
236991 20/22 AAAAAAAAAAAAAAAATAACAA
239374 22/24 AAAAAAAAAAAAAGAAGAAAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 302423
Total number of repeats detected.............. 17
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 7 5 1 0
30 to 39 1 2 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 1 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 9 7 1 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7291982|gb|AE003469.1|AE003469 Drosophila melanogaster genomic scaffold 142000013386045 section 3 of 17, complete sequence
Position Repeat-length Repeat
1392 20/22 AAAAAAAAAAAAAAACAATAAA
47691 19/21 AAAAAACCAAAAAAAAAAAAA
75403 18/20 AAAAAAATAATAAAAAAAAA
105202 25/27 AAAAAAAAAAAAAAAAAAAAAAAACCA
121019 18/20 AAAAAAAAAAGAAAAACAAA
125865 20/22 AAAAAAAAAAAACAAAAGAAAA
129585 18/20 AAAAAAAAAAAAATAGAAAA
291083 18/20 AAAAAAAAAAAATAGAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 301868
Total number of repeats detected.............. 8
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 8 0 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 8 0 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7291959|gb|AE003468.1|AE003468 Drosophila melanogaster genomic scaffold 142000013386045 section 2 of 17, complete sequence
Position Repeat-length Repeat
74066 27/30 TTTTTTTTTTTTTTTTTTTTTTTTTAATTA
130101 22/24 TTTTTTTTTTTTTTTTTTGTTTTG
141511 19/21 TTTTTTTTTTTTTTTTTTTAA
144451 18/20 TTTTTTTTTTTTTTTTTACT
148282 19/21 AAAAAAAAAAAAAAAAAGCAA
156810 20/22 TTTTTTTTTTTTTTTTTTTTGA
158884 22/24 AAAAACAAAAAAAAAAAAAAATAA
162843 25/27 AAAAAAAAAAAAAAAAAAAAAAAATAT
190284 18/20 TTTTTTTTTTTTTTTAATTT
214298 21/23 AAAAAAAAAAAAACAAAAAAAAG
227975 21/23 AAAAAACAAAAAAAAAAAAAAAC
290197 22/24 AAAAAAAAAAAAAAAAAAAAAATT
290519 22/24 AAAAAATAAAAATAAAAAAAAAAA
302109 18/20 AAAAAAAAAAAAAGAAAACA
308658 19/21 TTTTTTTTTTTTTTTTTTGTC
----------------------------------------------------------------------------
Total sequence length......................... 310120
Total number of repeats detected.............. 15
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 8 6 0 0
30 to 39 0 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 8 7 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7291904|gb|AE003467.1|AE003467 Drosophila melanogaster genomic scaffold 142000013386045 section 1 of 17, complete sequence
Position Repeat-length Repeat
1824 20/22 TTTTTGTTTTTTTTTTTTTTTA
28090 18/20 AAAAAAAAACAAAAATAAAA
34293 33/36 AAAAAAAAAAAAAAAAAAAAAAAAAAAAGCAAAAGA
57028 21/23 TTTTTTTTTTTTTTTTTTTTTGG
65653 18/20 AAAAAATAAAAAAAAAAATA
101426 24/26 TTTTTTTTTTTTTTTTTTTTTTTTGA
113894 21/23 TTTTTTTTTTTTTTCTTTTTTGT
----------------------------------------------------------------------------
Total sequence length......................... 298644
Total number of repeats detected.............. 7
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 2 4 0 0
30 to 39 1 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 3 4 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7316103|gb|AE002602.1|AE002602 Drosophila melanogaster genomic scaffold 142000013386050, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 0
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7295475|gb|AE003567.1|AE003567 Drosophila melanogaster genomic scaffold 142000013386050 section 54 of 54, complete sequence
Position Repeat-length Repeat
1611 22/24 AAAAAAAAACAAAAACAAAAAAAA
5072 22/24 TTTTTTTTTTTTTTTTTTTGTTAT
8401 28/31 TTTTTTTTTTTTTTTTTTTTTTTTTTTGTGG
15015 20/22 AAAAAAAAAAAAAAGAAAAAGA
17979 23/25 AAAAAAAAAAAAAAGAAAATAAAAA
18690 20/22 AAAAAAAAAAAAAAAAAGAAAT
26992 21/23 TTTTTTTTTTTTTTTTTTTGTTA
32346 18/20 TTTTTTTTTTTTTTTTTTGA
33939 22/24 TTTTTTTTTTTTTTTTTTTTTTGG
48403 18/20 TTTTTTTTTTTTTGTGTTTT
58841 24/26 AAAAAAAAAAAAAAAAAACAAAACAA
60817 28/31 AAAAAAAAAAAAAAAAAAAACAAAAAAGATA
61840 23/25 AAAAAAAAAAAAAAAAAAACAAATA
70467 21/23 AAAAAAAAAAAACAAACAAAAAA
102349 20/22 TTTTTTTGTGTTTTTTTTTTTT
102686 18/20 TTTTTTTTTTTGTTTTTGTT
----------------------------------------------------------------------------
Total sequence length......................... 104808
Total number of repeats detected.............. 16
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 7 7 0 0
30 to 39 1 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 8 8 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7295459|gb|AE003566.1|AE003566 Drosophila melanogaster genomic scaffold 142000013386050 section 53 of 54, complete sequence
Position Repeat-length Repeat
19826 20/22 TTTTTCTTTTTTTTTTTTTTGT
26887 19/21 TTTTTTTTTTTTTTTTGGTTT
51529 23/25 TTTTTTTTTTTTTTTTTTTTGTTTC
53191 18/20 TTTTTTTATTTTTTTATTTT
58171 18/20 TTTTTTTTTTTTTTTTGTAT
86313 18/20 TTTTTTTTTTTTTTGCTTTT
121859 26/28 AAAAAAAAAAAAAAAAAAAAAAAAAATG
132259 18/20 TTTTTTTTTGTTTTTTTTTC
136672 20/22 AAAAAAAAAAAACAAAAAAAAT
137515 26/28 TTTTTCATTTTTTTTTTTTTTTTTTTTT
140030 23/25 TTTTTTTTTTTTTTTTTGCTTTTTT
144189 22/24 AAAAATAATAAAAAAAAAAAAAAA
155773 18/20 TTTTTATTTTTTTCTTTTTT
159350 20/22 AAAAAAATAAAAATAAAAAAAA
168966 19/21 AAAAAAAAAAAAAAAAGAAAT
176307 19/21 TTTTTGTTTTTTTTTTTTTCT
187377 19/21 AAAAAAAACAAAAAAAAAAGA
207644 18/20 TTTTTATTTTTTTTTTTTTG
216518 18/20 TTTTTTTTTTTTTTTGTTTG
223923 18/20 TTTTTTTTTTTTTTGCTTTT
236668 20/22 TTTTTATTTTATTTTTTTTTTT
253715 19/21 AAAAAAAATACAAAAAAAAAA
256164 24/26 AAAAAGAAAAAAAAAAACAAAAAAAA
257108 27/30 TTTTTGTTTTTTTTTTTTTTTTTGTTTTTG
258142 23/25 TTTTTTTTTTTTTTTTTTTTTTGTA
262754 23/25 AAAAAAAAAAAAAAAAAAAAAATAG
270215 18/20 TTTTTTCCTTTTTTTTTTTT
----------------------------------------------------------------------------
Total sequence length......................... 286716
Total number of repeats detected.............. 27
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 9 17 0 0
30 to 39 0 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 9 18 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7295423|gb|AE003565.1|AE003565 Drosophila melanogaster genomic scaffold 142000013386050 section 52 of 54, complete sequence
Position Repeat-length Repeat
13190 22/24 TTTTTTTTTTTTTTTTCTTTCTTT
13615 24/26 AAAAAAAAAAAAAAAAAAAAAAACCA
67427 19/21 TTTTTTCTTCTTTTTTTTTTT
67860 18/20 TTTTTTTATTTTTTTTTTGT
84098 21/23 AAAAACAAAAAAAAAAAAAAGAA
89953 18/20 TTTTTGTTATTTTTTTTTTT
94752 27/30 TTTTTTTTTTTTTTTTTTTTTTTTGGTTTC
114237 18/20 GGGGGGGGGGGGGGTGGTGG
125621 24/26 TTTTTTTTTTTTTTTTTTTTGTTTTC
144258 18/20 TTTTTTTTCTTTTTTCTTTT
162655 21/23 AAAAAACAAAAAAAAAAAAATAA
168274 18/20 TTTTTTGTTTTTTTTTTTTG
172003 28/31 AAAAACAAAAAAAAAAAAAACAAAAAAAAAG
186443 19/21 AAAAAAAAAAAAAAAAAACAC
193797 25/27 AAAAAAAAAAAAAAAAAACAGAAAAAA
198615 19/21 TTTTTCGTTTTTTTTTTTTTT
215920 19/21 AAAAATACAAAAAAAAAAAAA
242068 18/20 AAAAAAAAAAAGAAGAAAAA
243757 21/23 AAAAAAAAAATAAAAATAAAAAA
264010 18/20 AAAAAAAAAAAAATAACAAA
283979 20/22 AAAAATACAAAAAAAAAAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 286782
Total number of repeats detected.............. 21
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 10 8 1 0
30 to 39 1 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 11 9 1 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7295378|gb|AE003564.1|AE003564 Drosophila melanogaster genomic scaffold 142000013386050 section 51 of 54, complete sequence
Position Repeat-length Repeat
24606 18/20 TTTTTTGGTTTTTTTTTTTT
57020 21/23 TTTTTTCTTTTTTTTTTTCTTTT
78737 20/22 CCCCCCGCCCCCCCCCCCCCCT
84147 22/24 AAAAAAAAAAAAAAACAAAAGAAA
97147 18/20 TTTTTTTTTTTTATGTTTTT
113975 28/31 AAAAAAAAAAAAAAAAAAAAAAAAGGAAATA
125207 18/20 TTTTTTTTTTTTTTTTGTTG
171958 21/23 AAAAAAAAAAAGAAAAAAAAAAT
172644 18/20 AAAAAAAAAAAAAAAAAATT
189305 41/45 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATGTG
224574 19/21 AAAAAAAAAAAAAAAAAAATG
248842 20/22 TTTTTTTTTTTTTTTTGGTTTT
260134 19/21 TTTTTTCTTTTTCTTTTTTTT
262714 19/21 AAAAAAAAAAAAAAAAGGAAA
278217 21/23 AAAAAAAAAAAAAAAAACAAAAC
288699 24/26 TTTTTATTTTTGTTTTTTTTTTTTTT
300479 22/24 TTTTTTTTTTTTTTTGTATTTTTT
----------------------------------------------------------------------------
Total sequence length......................... 301840
Total number of repeats detected.............. 17
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 6 8 0 1
30 to 39 1 0 0 0
40 to 49 1 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 8 8 0 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7295346|gb|AE003563.1|AE003563 Drosophila melanogaster genomic scaffold 142000013386050 section 50 of 54, complete sequence
Position Repeat-length Repeat
31726 19/21 TTTTTTTTTTTTTGTTTTTAT
32533 22/24 TTTTTTTTTTTTTATTTTTATTTT
36297 18/20 TTTTTATTTTTTTATTTTTT
38465 18/20 TTTTTTTTTTTTTTTTGTCT
42651 24/26 AAAAAAAAAACAAAACAAAAAAAAAA
47931 20/22 AAAAAAAAAAAAAAAATTAAAA
119372 22/24 TTTTTTTTTGTTTTTCTTTTTTTT
133528 18/20 TTTTTTTTTTTTTTTTGTTA
223207 37/41 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAGCA
224409 18/20 AAAAAAAAAAAAGAAACAAA
----------------------------------------------------------------------------
Total sequence length......................... 277325
Total number of repeats detected.............. 10
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 3 6 0 0
30 to 39 0 0 0 0
40 to 49 1 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 4 6 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7295332|gb|AE003562.1|AE003562 Drosophila melanogaster genomic scaffold 142000013386050 section 49 of 54, complete sequence
Position Repeat-length Repeat
3566 20/22 TTTTTTTTTTTTTTATTTTTTA
8795 22/24 TTTTTTTTTTTTTTTTGTTTTTTC
29056 20/22 AAAAAAAAAAAAAAAAAAACAC
34402 22/24 TTTTTTTTTTTTTTTTTTTTTTGG
102043 28/31 TTTTTTTTTTTTTGGTTTTTTTTTTTTTTTG
151757 20/22 AAAAAAAAAAAAAAAAAACGAA
179366 24/26 AAAAAAAAAACACAAAAAAAAAAAAA
185952 18/20 TTTTTTTTTTGTTTTTTGTT
192347 19/21 TTTTTTTTTTTTTTTGCTTTT
205963 33/36 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCT
215527 20/22 TTTTTTATGTTTTTTTTTTTTT
249040 25/27 TTTTTTTTTTTTTTTTTTTGTTTTCTT
----------------------------------------------------------------------------
Total sequence length......................... 249584
Total number of repeats detected.............. 12
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 3 7 0 0
30 to 39 1 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 4 8 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7295317|gb|AE003561.1|AE003561 Drosophila melanogaster genomic scaffold 142000013386050 section 48 of 54, complete sequence
Position Repeat-length Repeat
7051 18/20 TTTTTTTTTTTGTTTTATTT
27651 20/22 AAAAAAAAAAAAAAAAAATAAC
48036 20/22 TTTTTTATTTTTATTTTTTTTT
50543 22/24 AAAAAAAAAGAAAAGAAAAAAAAA
63157 26/28 TTTTTTTTTTTTTTTTTTTTTAATTTTT
74225 20/22 TTTTTTTGTATTTTTTTTTTTT
79024 22/24 AAAAAAAACAAAAAAAAAAAAACA
85377 18/20 TTTTTTTTTTTTTTTTTGTG
88511 28/31 TTTTTTTTTTTTTTTTTTTTTTTTTTTTGGG
98376 18/20 AAAAATAAAAAAATAAAAAA
101096 20/22 AAAAAAAAAAAAACAACAAAAA
117212 18/20 TTTTTTTTTTTTTTTAATTT
121140 20/22 AAAAAAAAAAAAAAAAATAAAT
129028 18/20 TTTTTTATTTGTTTTTTTTT
135845 22/24 AAAAAACAAAAAACAAAAAAAAAA
142761 21/23 AAAAAAAAAAAAAAAAAAAAATG
146815 18/20 TTTTTCTTCTTTTTTTTTTT
164784 24/26 AAAAAAAAAAAAAAAAACAAAAAACA
200790 24/26 AAAAAATACAAAAAAAAAAAAAAAAA
219003 20/22 TTTTTTTTTGTTTTTTTTTTTG
228164 21/23 AAAAAAAAAAGAAAGAAAAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 274307
Total number of repeats detected.............. 21
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 11 9 0 0
30 to 39 0 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 11 10 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7295278|gb|AE003560.1|AE003560 Drosophila melanogaster genomic scaffold 142000013386050 section 47 of 54, complete sequence
Position Repeat-length Repeat
9393 21/23 AAAAACAAAAAACAAAAAAAAAA
29903 23/25 TTTTTTGTTTTTTTTTTTTTTTGTT
40757 23/25 AAAAAAAAAAAAAAAAAAAACCAAA
49071 20/22 AAAAAAAAAAAAAAACAAAAGA
50487 20/22 TTTTTTTTTTTTTGGTTTTTTT
57421 24/26 TTTTTTTTTTTTTTTTTTTTCTATTT
86050 26/28 TTTTTTTTTGTTTTTTTTTTTTTTTTTG
101120 19/21 AAAAAAAAAAAAACAGAAAAA
111339 24/26 TTTTTTTTTTTTGTTTTTTTTTTGTT
127799 19/21 TTTTTTTGTTTTTTTTTTTCT
135949 18/20 AAAAAAAAATAAAAATAAAA
156804 21/23 TTTTTTTTTTTTTTTCTTTGTTT
204851 20/22 AAAAACAAAAAACAAAAAAAAA
216892 19/21 TTTTTTTTTTTTTTTTATTTC
220539 21/23 TTTTTTTTTTTTTTGTTTTGTTT
220813 24/26 TTTTTTTCTTATTTTTTTTTTTTTTT
224465 19/21 AAAAAAAAAAAGAAAAAAAAT
228352 19/21 CCCCCCCCCCCCCCCCCCGTC
232211 24/26 AAAAAAAAAAAAAAAAAAAAAAATAT
260693 18/20 TTTTTCTTTGTTTTTTTTTT
276526 24/26 TTTTTTTTTTTTTTTTTTTTTTTATC
----------------------------------------------------------------------------
Total sequence length......................... 285495
Total number of repeats detected.............. 21
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 8 12 0 1
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 8 12 0 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7295229|gb|AE003559.1|AE003559 Drosophila melanogaster genomic scaffold 142000013386050 section 46 of 54, complete sequence
Position Repeat-length Repeat
8819 21/23 TTTTTTTTTCTTCTTTTTTTTTT
30395 19/21 CCCCCCCCCCCCCCCCCCTTC
44080 18/20 AAAAAAAAAAAACAATAAAA
53972 25/27 TTTTTTTTTTTTTTTTTTTTTTTTGTC
59227 18/20 GGGGGGGGTGGGTGGGGGGG
63099 21/23 AAAAAAAAAAAAAAAAACAAAAT
66113 23/25 CCCCCCCCCCCCCCCCCCCCAACCC
67051 18/20 AAAAAAATAAAAATAAAAAA
96948 18/20 TTTTTTTTTTTTTTTTTGTG
106044 21/23 TTTTTTTTTTTTTGTTTGTTTTT
112550 21/23 AAAAAAAAAAAAAAAACGAAAAA
134073 23/25 AAAAAAAAAAAGAAAAAAAAAAAAC
162378 19/21 AAAAAAAAAAAAAGAAAAGAA
169714 22/24 AAAAAAAAAGTAAAAAAAAAAAAA
171870 19/21 GGGGGGGGGGTGGGGGTGGGG
172297 24/26 TTTTTTTTTTTTTTTTTTTTTTTGCT
180648 18/20 TTTTTTTTTCTTTTTTTTTG
181769 20/22 TTTTTTTTTTCTTTTTCTTTTT
193567 20/22 AAAAAAAAAAAAAAAAAAACGA
194594 19/21 AAAAAAAAAAATAAATAAAAA
195437 18/20 AAAAAAAAAAAAAAAAATAT
223336 18/20 TTTTTGTGTTTTTTTTTTTT
223451 18/20 TTTTTTTTTTTTTTTTTTGG
256939 22/24 TTTTTTTTTTTGCTTTTTTTTTTT
----------------------------------------------------------------------------
Total sequence length......................... 269454
Total number of repeats detected.............. 24
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 10 10 2 2
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 10 10 2 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7295193|gb|AE003558.1|AE003558 Drosophila melanogaster genomic scaffold 142000013386050 section 45 of 54, complete sequence
Position Repeat-length Repeat
16226 19/21 TTTTTATTTTTTTTTTTTTTG
30358 23/25 AAAAAAAAAAAAAAAACAAGAAAAA
47805 19/21 TTTTTTTTTTTTTTTTTTTGG
101524 20/22 AAAAAAGTAAAAAAAAAAAAAA
103392 22/24 TTTTTTTTTTTTTGTTTTTTCTTT
110983 19/21 AAAAAAAAATAAAATAAAAAA
128210 21/23 TTTTTTTTTTTTTTTTGTTTTTG
130926 29/32 TTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGT
147129 22/24 AAAAAACAAAACAAAAAAAAAAAA
154421 22/24 TTTTTTTTTTTTTTTTTTTTGTTG
156770 19/21 AAAAACTAAAAAAAAAAAAAA
171307 22/24 AAAAAAAAAAATAACAAAAAAAAA
174876 19/21 AAAAAAAAATAAAAACAAAAA
177862 22/24 TTTTTGTTTTTTTTTTTTTTTTCT
224128 19/21 AAAAAAAAAAACAACAAAAAA
249988 27/30 TTTTTTTTTTTTTTTTTTTTTTTTATTTAA
264951 20/22 AAAAAAAAAAAAAATAAAAATA
271468 18/20 TTTTTTTTTTTTTTTTTTGG
----------------------------------------------------------------------------
Total sequence length......................... 273744
Total number of repeats detected.............. 18
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 9 7 0 0
30 to 39 0 2 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 9 9 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7295172|gb|AE003557.1|AE003557 Drosophila melanogaster genomic scaffold 142000013386050 section 44 of 54, complete sequence
Position Repeat-length Repeat
763 18/20 TTTTTTTTTTTTTTAATTTT
9650 19/21 TTTTTCTTTCTTTTTTTTTTT
26583 20/22 AAAAAAAAAAATAAAAAACAAA
27153 22/24 AAAAACAAAACAAAAAAAAAAAAA
37541 18/20 AAAAAAAAAACAAAAAAATA
38449 26/28 TTTTTTTTTTTTTTTTTTTTTTTTTTGG
41397 18/20 TTTTTTTTTTTCTATTTTTT
46279 21/23 AAAAAAAAAAAAAAAAAAAAATC
74633 25/27 TTTTTCTTGTTTTTTTTTTTTTTTTTT
87836 18/20 TTTTTTGTTTTTATTTTTTT
162912 18/20 TTTTTTTTTTTTTTGTTTTG
167325 22/24 TTTTTTTTTTTTTTTTTTTTTTAA
169567 23/25 AAAAAAAAAAAAAAAAAAAAAATAC
172041 32/35 AAAAAAAAAAAAAAAAAAAAAAAAAAAGATATAAA
172217 21/23 TTTTTTTTTTTTTTTGTTTTTCT
175537 18/20 TTTTTTTTTCTTTTTTTTTA
176795 18/20 AAAAAAAATAATAAAAAAAA
189147 24/26 AAAAAAAAAAAAAAAAAAAAACTAAA
194630 21/23 AAAAAGCAAAAAAAAAAAAAAAA
196587 25/27 AAAAAAAAAAAAAAAAAAAAAAACCAA
197116 18/20 AAAAATAAAAATAAAAAAAA
197197 18/20 AAAAAAACGAAAAAAAAAAA
199492 18/20 AAAAAAAAAAAATAATAAAA
202129 18/20 AAAAAAAAACCAAAAAAAAA
204634 18/20 CCCCCTTCCCCCCCCCCCCC
211026 18/20 AAAAATGAAAAAAAAAAAAA
212683 19/21 AAAAAAAAAAAATAAAAAAAT
224266 22/24 AAAAAAATACAAAAAAAAAAAAAA
232293 24/26 AAAAAAAAAAAAAAGAAAAAAAATAA
237471 18/20 AAAAAAAAAACAAAATAAAA
238987 18/20 AAAAAAAAAAAAACAAAAGA
245032 20/22 AAAAAAAAAAAAAAAGAAATAA
248968 18/20 AAAAAAAAAAAAAACTAAAA
250248 19/21 TTTTTTTTTTTTTTTTTTTGC
258219 18/20 AAAAAAAAAAAAACAAAAAT
262226 21/23 TTTTTTTTTTTTTTTTTTTTTGC
265530 19/21 TTTTTTTTTTTTTTTGGTTTT
266676 20/22 GGGGGGGGGGGGGGGGGCGGCG
276129 23/25 TTTTTTTTTTTTTGTTTTTTTTATT
----------------------------------------------------------------------------
Total sequence length......................... 286418
Total number of repeats detected.............. 39
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 22 14 1 1
30 to 39 1 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 23 14 1 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7295117|gb|AE003556.1|AE003556 Drosophila melanogaster genomic scaffold 142000013386050 section 43 of 54, complete sequence
Position Repeat-length Repeat
5121 18/20 TTTTTTATTTATTTTTTTTT
6321 19/21 TTTTTTTTTTTGTGTTTTTTT
15791 23/25 TTTTTTTTTTTTTTTGTTTTTTGTT
15839 30/33 TTTTTTTTTTCTTTTTTTTTTTTTGTTTTGTTT
51163 21/23 TTTTTTTTTTTTTTGTTTTTCTT
62167 19/21 TTTTTATTTTTTTTTTTTTTG
75792 18/20 CCCCCGCCCCCCCCCCACCC
92136 22/24 TTTTTTTTTTTTTGTTTTTTTTTC
99807 29/32 AAAAAAAAAAAAAAAAAAAAAAACACAAAGAA
106059 24/26 TTTTTTTTTATTTGTTTTTTTTTTTT
124168 22/24 AAAAATAAAAAAAAATAAAAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 281146
Total number of repeats detected.............. 11
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 1 7 0 1
30 to 39 1 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 2 8 0 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7295064|gb|AE003555.1|AE003555 Drosophila melanogaster genomic scaffold 142000013386050 section 42 of 54, complete sequence
Position Repeat-length Repeat
7812 22/24 TTTTTGTTTTTTTTTTTTTTTTGT
46176 23/25 TTTTTTTTTTTTTTTATTTTTTGTT
58369 18/20 TTTTTTTTTGGTTTTTTTTT
78680 19/21 TTTTTATTTTTATTTTTTTTT
86095 19/21 TTTTTTTATATTTTTTTTTTT
89064 19/21 TTTTTTTTTTTTTGTTTTTTG
111078 20/22 AAAAAAAAAAAAGAAACAAAAA
125166 21/23 TTTTTGTTTTGTTTTTTTTTTTT
154269 19/21 AAAAAAAAACAAGAAAAAAAA
161663 19/21 TTTTTTTTTTTTTTTTTTGGT
164361 19/21 TTTTTTTGTTTTTTGTTTTTT
166717 19/21 TTTTTTTTTTTTTTGTTTTTG
176461 19/21 AAAAAAAAGAAAAAAAAAACA
181751 20/22 AAAAAAATAAACAAAAAAAAAA
183739 23/25 TTTTTTATTTTTTTTTTTTTTTTGT
196706 24/26 AAAAAAAAAAAAAAAAATAAGAAAAA
218162 18/20 AAAAAAAAAAAAATAAATAA
237161 18/20 AAAAAAAAAAAGAAAAAAAC
239730 19/21 TTTTTTTTTTTTTTGTTTTCT
240208 22/24 TTTTTTTTTTTTTTTTTGTTTTTG
250262 19/21 AAAAAAAAAAAAATAAAAAAT
252114 19/21 AAAAAAAAAAAAAAAAAAGCA
252639 20/22 TTTTTTTTTTTGTTTTTTGTTT
----------------------------------------------------------------------------
Total sequence length......................... 281936
Total number of repeats detected.............. 23
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 9 14 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 9 14 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7295028|gb|AE003554.1|AE003554 Drosophila melanogaster genomic scaffold 142000013386050 section 41 of 54, complete sequence
Position Repeat-length Repeat
3033 20/22 AAAAAAAAAGAAAAAAAAAACA
18724 19/21 TTTTTTTTTTTTTTGTTTTGT
30914 20/22 TTTTTCGTTTTTTTTTTTTTTT
41331 19/21 TTTTTTTTTTTTTAATTTTTT
58454 21/23 TTTTTTTATTTTATTTTTTTTTT
61941 18/20 TTTTTTTTTTTTTTTTTGGT
67939 22/24 AAAAAAAAAAAATAAAAATAAAAA
68625 21/23 AAAAAAAAAAAAAAACACAAAAA
76197 18/20 AAAAAATAAGAAAAAAAAAA
130988 19/21 TTTTTGTTTTTTTTTTTATTT
160415 19/21 AAAAAAAAAAAAAAAAACAGA
188223 19/21 AAAAAAATAAAAAAAAAAACA
193991 21/23 TTTTTTTTTTTTTTTGTTTTTTA
208766 22/24 AAAAACCAAAAAAAAAAAAAAAAA
213156 21/23 AAAAAAAAAAAACAAAAAAAAAC
213578 19/21 TTTTTTTTTTTTCTTTTTTCT
214344 19/21 AAAAAAAAAAAAAAAAAAGAC
220085 25/27 AAAAAAAAAAAAAAAAAAAAAAAACCA
232512 19/21 AAAAAAAAAAAAAAAATAAGA
235183 22/24 AAAAAAAACAAAAAAAAAAAAACA
245012 21/23 AAAAAAAAAATAAAAAAAAATAA
245591 22/24 TTTTTTTTTTTTTTTCTTTTTTTG
247552 20/22 TTTTTTTTTTTTTTTTTTTGAT
----------------------------------------------------------------------------
Total sequence length......................... 285729
Total number of repeats detected.............. 23
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 13 10 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 13 10 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7294982|gb|AE003553.1|AE003553 Drosophila melanogaster genomic scaffold 142000013386050 section 40 of 54, complete sequence
Position Repeat-length Repeat
2864 27/30 TTTTTTTTGTATTTTTTTTTTTTTTTTTTG
20506 21/23 AAAAAAAAAAATAAAAACAAAAA
24066 18/20 AAAAAAAAAAAAAAAAACAG
27083 21/23 AAAAAAAAAAAAAAAAAAAAGAC
29364 25/27 AAAAAAAAAAAAAAAAAAAAAAAACAT
34199 22/24 AAAAAAAAAAAAGAAAAAAGAAAA
34949 19/21 AAAAAAAAAAAAAAAGAAAAT
39505 24/26 AAAAAAAAAAAAAAACAAAACAAAAA
42890 18/20 AAAAAAAAAAAAAAGGAAAA
76525 21/23 AAAAAAAGAAAAAAAAAAAGAAA
77100 19/21 AAAAAAAAAAAAAAAAAATAT
91305 18/20 AAAAAAAAAAAAAACGAAAA
140571 20/22 AAAAAAAAAATAAAAAAAAAAC
151184 20/22 TTTTTTTTTTTTTTTGCTTTTT
157181 19/21 AAAAAAAATCAAAAAAAAAAA
157673 19/21 AAAAAAAAAAACAAAGAAAAA
159158 18/20 TTTTTTTTTTTTTGTTTTTG
168857 20/22 AAAAAAAAAAAAAAGAAAACAA
173517 21/23 AAAAAAATAAAGAAAAAAAAAAA
244094 19/21 AAAAAGAAAAGAAAAAAAAAA
249063 24/26 AAAAAAAAAAAAAAGAAAAAACAAAA
269359 19/21 TTTTTTTTTTTTCTTCTTTTT
271073 19/21 AAAAAAAAAAAAAAAAAAATG
----------------------------------------------------------------------------
Total sequence length......................... 287145
Total number of repeats detected.............. 23
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 19 3 0 0
30 to 39 0 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 19 4 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7294927|gb|AE003552.1|AE003552 Drosophila melanogaster genomic scaffold 142000013386050 section 39 of 54, complete sequence
Position Repeat-length Repeat
80029 18/20 AAAAAAAAAAAAAAAATAAT
81551 21/23 AAAAAAAAAAAAAAGAAAAAAAG
81748 29/32 TTTTTTTTTTTTTTTTTTTTTTAATTTTTATT
108176 19/21 TTTTTTCTCTTTTTTTTTTTT
153696 19/21 TTTTTTTTTTTTTGTATTTTT
176963 24/26 AAAAATACAAAAAAAAAAAAAAAAAA
198429 19/21 AAAAAAAAAAAAAAAAAATCA
214602 18/20 GGGGGGGGGGGAGGGGGAGG
220970 19/21 TTTTTTTTTTTTTTTTTTTGG
224666 21/23 TTTTTTTTTTTTTTTTTGGTTTT
233075 23/25 AAAAAAAAAAAAAAAAAAAAACAAG
243302 26/28 TTTTTTTTTTTTTTTTTTTTTTTGGTTT
249303 25/27 AAAAAAAAAAAAAATAAAAATAAAAAA
253585 20/22 AAAAAAAAAAAAAAAAAAAACG
257743 44/48 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTATG
259527 18/20 AAAAAAAAAAAAAAAAAACC
263702 18/20 AAAAAAAAAAAACAAGAAAA
----------------------------------------------------------------------------
Total sequence length......................... 286784
Total number of repeats detected.............. 17
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 9 5 1 0
30 to 39 0 1 0 0
40 to 49 1 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 10 6 1 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7294877|gb|AE003551.1|AE003551 Drosophila melanogaster genomic scaffold 142000013386050 section 38 of 54, complete sequence
Position Repeat-length Repeat
52650 20/22 TTTTTTTGTTTTTTTTTTTTGT
71679 18/20 TTTTTTTTTTTTGTATTTTT
72457 25/27 AAAAAAAAAACAAAAAAAAAAAAAAAC
100234 18/20 TTTTTTTTTTTTTTTGTTTC
102981 18/20 TTTTTTTTTATTATTTTTTT
112528 18/20 TTTTTTTTTTTATTATTTTT
157335 18/20 AAAAAAAAAAAAAATAATAA
190932 33/36 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAC
197810 20/22 AAAAAAAAAAAAAAAAGAAATA
211626 22/24 TTTTTTTATTTTTTTTTTTTTTTG
236378 27/30 AAAAATTAAAAAAAAAAAAAAAAAAAAAAG
260004 24/26 TTTTTTTTTTTTTTTTTTTTTTTTGA
272691 18/20 TTTTTTTTCTCTTTTTTTTT
----------------------------------------------------------------------------
Total sequence length......................... 285978
Total number of repeats detected.............. 13
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 3 8 0 0
30 to 39 2 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 5 8 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7294844|gb|AE003550.1|AE003550 Drosophila melanogaster genomic scaffold 142000013386050 section 37 of 54, complete sequence
Position Repeat-length Repeat
59853 18/20 AAAAAAAAAAAACAAAAACA
60766 18/20 AAAAAAAAAAAACAAAGAAA
71410 18/20 AAAAAAACAAAAAAAAAACA
73379 20/22 TTTTTGTTTTTTTTTTTATTTT
81967 26/28 TTTTTTTTTTCTGTTTTTTTTTTTTTTT
83095 18/20 TTTTTTTTTTTTTGATTTTT
96210 25/27 TTTTTTGTTTGTTTTTTTTTTTTTTTT
141544 30/33 TTTTTTTTTGTTTTTTTTTTTTTTTGTTTTTTG
185035 21/23 TTTTTTTCTATTTTTTTTTTTTT
185414 19/21 TTTTTTTTTTTTTGTATTTTT
188062 24/26 AAAAAAAAAAAAAAGAAAAAAAAAAT
212482 19/21 TTTTTTTTCTTCTTTTTTTTT
239069 18/20 TTTTTGTTTTTTTTTTTTTC
275208 20/22 TTTTTTGTGTTTTTTTTTTTTT
282035 21/23 AAAAAAAAAAAAACAAAAACAAA
284426 19/21 CCCCCCCCCCCCCCCCCCGCA
294561 18/20 TTTTTTATTTTTTTTTTTTG
296213 18/20 GGGGGGGGGGGGGGGGGTTG
----------------------------------------------------------------------------
Total sequence length......................... 298675
Total number of repeats detected.............. 18
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 5 10 1 1
30 to 39 0 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 5 11 1 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7294827|gb|AE003549.1|AE003549 Drosophila melanogaster genomic scaffold 142000013386050 section 36 of 54, complete sequence
Position Repeat-length Repeat
8763 18/20 AAAAAAAAAAAAAGAAAAAC
10514 21/23 AAAAAAAAAAACCAAAAAAAAAA
15194 23/25 TTTTTTCTTTTTTTTTTTTTTGTTT
19200 18/20 AAAAAAAAAAAAATATAAAA
20402 20/22 AAAAAAAAAAAAAAAAAAAACT
21725 25/27 TTTTTTTTTTTTTTTTTTTTTGGTTTT
24208 25/27 TTTTTTTTTTTTTTTTTTTGGTTTTTT
46106 18/20 TTTTTTTTTTTTTTCATTTT
56742 18/20 AAAAAAAAAAAAAGAAAATA
87435 20/22 TTTTTATTTTTTTTTTTTGTTT
94630 18/20 TTTTTTTTTTTATTTTATTT
100227 19/21 AAAAAAAAAGAAAAAAAAAAC
108112 20/22 TTTTTTTTTTTTTTTTTTTTGG
111153 18/20 TTTTTTTTTTCTTCTTTTTT
127132 22/24 AAAAAAAAAAAAAAAAAAAACCAA
185554 25/27 AAAAAAAAAACCAAAAAAAAAAAAAAA
205968 22/24 AAAAAAACAAAAAAAAAAACAAAA
211805 20/22 AAAAAAAAAAAAAAAAAGCAAA
216684 26/28 AAAAACAAAAAAAAAAAAAAAATAAAAA
217556 19/21 AAAAAAAAAAAAAAAAAATAG
277208 20/22 TTTTTTATTTATTTTTTTTTTT
280659 21/23 TTTTTTTCTTTTTTTTTTTTTTG
294194 20/22 AAAAAAACAAAACAAAAAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 300477
Total number of repeats detected.............. 23
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 13 10 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 13 10 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7294819|gb|AE003548.1|AE003548 Drosophila melanogaster genomic scaffold 142000013386050 section 35 of 54, complete sequence
Position Repeat-length Repeat
1840 24/26 TTTTTTTTTTTTTTTTTTTTGCTTTT
14736 22/24 TTTTTGTTTTTTTTTTTTTGTTTT
19650 18/20 TTTTTGTTTATTTTTTTTTT
22169 18/20 TTTTTGTTTTTTTTTTTTTG
27447 19/21 AAAAAAAAAAAAAAAACTAAA
29508 21/23 TTTTTTTCTTTTCTTTTTTTTTT
43928 18/20 AAAAAAAAAAAAAAAAAAGG
45914 18/20 TTTTTTTTTGCTTTTTTTTT
63857 22/24 AAAAAAAAAAAAAAAAAGAAAATA
64513 21/23 AAAAAAAAAAAAATAGAAAAAAA
65047 18/20 AAAAAAAAAAAAATGAAAAA
68466 21/23 AAAAACAAAAAAAAAAAACAAAA
73248 20/22 AAAAAAAAAAAAAAGAAGAAAA
74897 18/20 AAAAAAAAAAAAAAACAAAT
76098 21/23 AAAAAAAAAAAAAAAAAAAAATC
88986 19/21 TTTTTTTTTTTCTTTATTTTT
94404 24/26 AAAAAAAAAAAGAAAAAAAAAAGAAA
95859 20/22 TTTTTTTTTTTTTTTTTTGTTG
96046 26/28 AAAAAAAAAAAAAAAAACAGAAAAAAAA
96283 23/25 AAAAAAAAAAAAAAAAAAAAAAACG
97291 21/23 AAAAAAAAAAAAAAAAAAACAAT
97426 19/21 TTTTTTCTTTTTTTTTTTTTG
120976 19/21 AAAAAAAAAAGGAAAAAAAAA
131353 18/20 AAAAAAAAAAACAGAAAAAA
135583 21/23 AAAAATACAAAAAAAAAAAAAAA
140649 22/24 AAAAAAAAAAAAAAAAAGAGAAAA
149334 19/21 AAAAAAAATAAAAAAAAAACA
163916 24/26 AAAAAAAAAAAAAAACAAAACAAAAA
167265 22/24 TTTTTTTTTTTTTTTTAATTTTTT
167559 19/21 TTTTTTTTTATTTTTTTTTTA
186400 20/22 AAAAAAAAAAACAAAAAAGAAA
186755 24/26 TTTTTTTTTTTTTGTTTTTTGTTTTT
187293 18/20 AAAAAAAAAAAAAAAAATTA
191916 29/32 AAAAATTAAAAAAAAAAAAAAAAAAAAAAGAA
195372 23/25 AAAAAAAAAAAAAAAAAACAGAAAA
197590 25/27 AAAAAAAAAAAAAAAAAAAAAAAAACC
199515 21/23 TTTTTATTTTTTTTTTTTTTTGT
200574 20/22 AAAAAAAAAAAAAAAGAAAATA
206641 20/22 AAAAAAAAAACAAAAAAATAAA
209052 23/25 AAAAAAAAAAAAAAAAAAGAAAAAC
221416 26/28 AAAAATACAAAAAAAAAAAAAAAAAAAA
229091 18/20 AAAAATTAAAAAAAAAAAAA
232393 18/20 AAAAAAAAAAAAGAAAAATA
232896 22/24 TTTTTTTTTTTTTTTTGTTTTTTG
241925 25/27 TTTTTTTTTTCATTTTTTTTTTTTTTT
----------------------------------------------------------------------------
Total sequence length......................... 244249
Total number of repeats detected.............. 45
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 29 15 0 0
30 to 39 1 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 30 15 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7294792|gb|AE003547.1|AE003547 Drosophila melanogaster genomic scaffold 142000013386050 section 34 of 54, complete sequence
Position Repeat-length Repeat
13530 23/25 TTTTTTGTTTTTGTTTTTTTTTTTT
29071 22/24 TTTTTTTGTTTTTTTTTTTTTTTC
61398 20/22 TTTTTTTTTATTTTTTATTTTT
72123 21/23 TTTTTATTTTTTTTATTTTTTTT
84748 21/23 AAAAAGCAAAAAAAAAAAAAAAA
85565 18/20 AAAAAAAAAAATAAAAATAA
89274 20/22 TTTTTTTTTCTTTTTTTTTTGT
92648 19/21 TTTTTTTTTTTTTGTTTTGTT
95372 19/21 TTTTTTTTTTTTTCTTTCTTT
96855 18/20 AAAAAAAAAAAAAGAAAATA
101828 20/22 TTTTTTTTTTTATTTTGTTTTT
111055 18/20 TTTTTTTTCTTTTTTTTTTG
122745 20/22 AAAAAAAAAAAAAAAAAAAATG
134160 22/24 TTTTTGTTTTTTTTTTTTTTTTTG
138143 19/21 AAAAAAAAATAAAAAAAAACA
138423 20/22 AAAAAAAAAAAAAAAACAAAAT
152452 22/24 TTTTTTTTTTTTTTATTTTATTTT
157013 21/23 AAAAAAAAACAAAAAAAAAAGAA
172810 18/20 AAAAATAAAAAAATAAAAAA
174301 21/23 AAAAAAAAATAATAAAAAAAAAA
176075 20/22 AAAAAAAAAAAAACGAAAAAAA
184353 18/20 TTTTTTTTTTTTTGCTTTTT
236342 18/20 TTTTTTTTTTTTATTATTTT
269208 19/21 TTTTTTTTTTGTTTTTTTCTT
----------------------------------------------------------------------------
Total sequence length......................... 281396
Total number of repeats detected.............. 24
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 10 14 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 10 14 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7294749|gb|AE003546.1|AE003546 Drosophila melanogaster genomic scaffold 142000013386050 section 33 of 54, complete sequence
Position Repeat-length Repeat
10830 18/20 TTTTTTTTTTTTTTTTTTCG
12874 23/25 TTTTTTTTTTTTTTTTTTTTTTTGA
16874 20/22 AAAAAAAAATATAAAAAAAAAA
33102 18/20 AAAAAAAAAAAAAAAACAAT
69993 18/20 AAAAAAAAAAGAAAAACAAA
116752 21/23 TTTTTTTTTTGTTTTTTTTTGTT
147566 19/21 TTTTTTTTTTTTCTTTTCTTT
150516 19/21 AAAAAAAAAAAAAAAAAACAG
161368 20/22 AAAAAAAAAAAAAAAAATTAAA
162901 19/21 AAAAAAAAAAAAAGAAAATAA
163059 18/20 AAAAAAAAAACACAAAAAAA
174676 26/28 AAAAAAAAAAAAAAAAAACACAAAAAAA
177672 20/22 TTTTTATTATTTTTTTTTTTTT
214273 18/20 AAAAAAAAAAAAAAAAACGA
231428 20/22 AAAAAATTAAAAAAAAAAAAAA
234734 23/25 AAAAAAACAAAAAAAAAAAAAAACA
247104 18/20 AAAAAAAAAAAAAAAAAACC
252074 19/21 AAAAAAATAAAAAAAAAAAAT
274339 18/20 AAAAAAAAAAAATAAATAAA
----------------------------------------------------------------------------
Total sequence length......................... 281602
Total number of repeats detected.............. 19
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 14 5 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 14 5 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7294729|gb|AE003545.1|AE003545 Drosophila melanogaster genomic scaffold 142000013386050 section 32 of 54, complete sequence
Position Repeat-length Repeat
4004 23/25 AAAAAAAAAAAAAGAAAAAAAATAA
9240 19/21 TTTTTTTTTTTTTTGTTTTTG
13653 18/20 AAAAAATAAAAAAAAGAAAA
45610 18/20 TTTTTTTTTTTTTTATTCTT
49511 18/20 CCCCCTCCCCCCCCCCCACC
61842 18/20 CCCCCCCCCCCACCCCCCCG
63466 21/23 AAAAAAAAAACTAAAAAAAAAAA
73352 22/24 AAAAAAAAAAAAATAATAAAAAAA
74220 18/20 TTTTTTTTTTTTCTTTTTTA
74390 19/21 TTTTTTTTTTTTTTTTGTTAT
85404 18/20 TTTTTTTTTTTTTATTTATT
106882 18/20 AAAAACAAAAAAAAAAAAAC
113563 18/20 AAAAAAACAAAAAAAAAAAC
115655 24/26 TTTTTTTTCTTTCTTTTTTTTTTTTT
118848 27/30 TTTTTTTTTTTTTTTTTTTTTTTTTATTAC
122150 29/32 TTTTTTTTTTTTTTTTTTTTTGTGTTTTTTTA
125458 18/20 AAAAAAAAAAAAAAAAGTAA
125616 21/23 AAAAATAAAAAAAAAAAAATAAA
133038 19/21 TTTTTTTTTTTTGTTTTTTTG
141449 19/21 CCCCCGCACCCCCCCCCCCCC
143541 19/21 TTTTTTTTTTTTTTTTTTCAT
144627 21/23 AAAAAAAAAAAACAAAGAAAAAA
145938 22/24 TTTTTTTTTTTTTTTTTGTTTTAT
158045 19/21 TTTTTTTTTTTTTTTGTTTGT
171879 18/20 AAAAAAAAAGAAAAAAAAAG
172172 20/22 AAAAAAAAAGAAAGAAAAAAAA
174214 18/20 AAAAAAAAAAAAAAAAACAC
175868 19/21 AAAAAAAATAAAAATAAAAAA
177232 18/20 AAAAAAAAAAAGAAAAAACA
181158 22/24 AAAAAAAAAAAAAAAAAATATAAA
181347 25/27 AAAAAAAAAAAAAAAAAAACCAAAAAA
181429 23/25 AAAAAAAAAAAATAAATAAAAAAAA
187809 25/27 AAAAAAAAAAAAAAAAAAAAGAATAAA
189385 20/22 AAAAAAAAAAAAAAAAAAACGA
192486 22/24 TTTTTTGTTGTTTTTTTTTTTTTT
202214 18/20 TTTTTGTTTTTTCTTTTTTT
210450 20/22 AAAAAAAAAAAAAAAAAATAAG
211807 22/24 AAAAAAAAATAAAAATAAAAAAAA
256098 20/22 GGGGGAGGGGGGGGGGGGGGTG
259681 18/20 TTTTTTTTTTTTTTGTATTT
264033 20/22 AAAAAAAAAAAAAAAATAATAA
----------------------------------------------------------------------------
Total sequence length......................... 281893
Total number of repeats detected.............. 41
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 22 13 1 3
30 to 39 0 2 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 22 15 1 3
----------------------------------------------------------------------------
Genomic Sequence:
gi|7294680|gb|AE003544.1|AE003544 Drosophila melanogaster genomic scaffold 142000013386050 section 31 of 54, complete sequence
Position Repeat-length Repeat
7359 20/22 TTTTTTTTTTTTTTTTTTATTA
20695 19/21 AAAAACAATAAAAAAAAAAAA
173935 19/21 AAAAAAAAAAAAAAAACAAAC
174012 22/24 AAAAAAAAAAAAAGAAAATAAAAA
184109 21/23 TTTTTTTTTTTTTTTTTTTTTGC
192870 20/22 TTTTTGTTTTTTTTTTTTTTTG
204844 18/20 AAAAAAAAAAAAAAAATAAC
210931 18/20 AAAAAAAAAAACAAATAAAA
223498 18/20 TTTTTTTTTTTTTTTTTTGA
235219 23/25 TTTTTTTTTTTTTTTTTTTGTTTTC
243471 18/20 AAAAAAAAAAAAAAAAAACG
254496 18/20 AAAAAAAATAAAAAAAAAAT
----------------------------------------------------------------------------
Total sequence length......................... 281869
Total number of repeats detected.............. 12
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 7 5 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 7 5 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7294631|gb|AE003543.1|AE003543 Drosophila melanogaster genomic scaffold 142000013386050 section 30 of 54, complete sequence
Position Repeat-length Repeat
508 18/20 AAAAACAAAAAAAAAAGAAA
4679 22/24 AAAAAAAAAAAAAAAAAAAAATAC
5335 19/21 AAAAAAAAAAAAAAAACGAAA
18973 18/20 CCCCCCCCCCCCCCCCAGCC
88026 19/21 AAAAAATAAAATAAAAAAAAA
147075 29/32 AAAAAAAAAAAAAAAAAAAAAGAAAAAAATAT
147224 19/21 TTTTTTTTTTTTTTTTTTGGT
154182 19/21 AAAAAAAAAAAAGAAAAAGAA
163785 19/21 AAAAAAAAAACAAAAAAAAAG
179241 36/40 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACA
182334 22/24 TTTTTTTTTTCTTTTTTTTTGTTT
189507 19/21 TTTTTGTCTTTTTTTTTTTTT
247190 19/21 AAAAAAAAAAAAACCAAAAAA
264609 19/21 AAAAAAAAAAAATACAAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 284386
Total number of repeats detected.............. 14
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 8 3 0 1
30 to 39 1 0 0 0
40 to 49 0 1 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 9 4 0 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7294592|gb|AE003542.1|AE003542 Drosophila melanogaster genomic scaffold 142000013386050 section 29 of 54, complete sequence
Position Repeat-length Repeat
3765 19/21 AAAAAAAAAAAAAAAAATTAA
45763 24/26 TTTTTTTTTTTTTTTTACTTTTTTTT
52389 18/20 TTTTTTTTTTGTTTTGTTTT
74885 18/20 TTTTTTTTTTTATATTTTTT
116217 22/24 TTTTTTTTTTTTTTTTTTTTGTTC
133554 20/22 TTTTTTGTTTTTTTTTTTTTTG
142241 21/23 AAAAAAAAAAAAAAAAAAACTAA
204060 18/20 TTTTTTTTTTTTTTTTTGGT
206433 19/21 AAAAAAAAAAAAAAAAACCAA
208059 20/22 TTTTTTTTATTTTTATTTTTTT
223515 18/20 AAAAATGAAAAAAAAAAAAA
224075 18/20 TTTTTTTATTTTATTTTTTT
232311 19/21 AAAAAAAAAAAAAAAGAAAAC
247045 19/21 AAAAATGAAAAAAAAAAAAAA
272002 18/20 TTTTTATTTTTTTTTTTTTG
275370 19/21 AAAAAAAAAAAAAAAAAAATG
281674 21/23 AAAAACCAAAAAAAAAAAAAAAA
283939 22/24 TTTTTTTTTTTTTTTTTTTGTATT
----------------------------------------------------------------------------
Total sequence length......................... 289887
Total number of repeats detected.............. 18
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 8 10 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 8 10 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7294556|gb|AE003541.1|AE003541 Drosophila melanogaster genomic scaffold 142000013386050 section 28 of 54, complete sequence
Position Repeat-length Repeat
11453 18/20 CCCCCCCCCCCCCCATCCCC
19634 18/20 AAAAAAAAAAAAATAAACAA
21483 19/21 AAAAAAAATTAAAAAAAAAAA
23229 20/22 AAAAAGAAAAAAAAAAAACAAA
29028 18/20 AAAAAAAAAACAATAAAAAA
30438 22/24 TTTTTATTTTTTTTTTTTTTTTGT
60940 19/21 TTTTTTTTTTCTTTTTTTTTG
79631 18/20 CCCCCCCCCCCCCCCCCACA
92216 18/20 AAAAAAAAAAAAAAAAATAC
114366 26/28 AAAAAAAAAAAAAAAAAAAAAAAAAATC
137017 20/22 TTTTTTTTTTTTTTGGTTTTTT
156681 20/22 TTTTTTTTTTTTTTTGTTTTCT
173124 19/21 AAAAAAAAAAAAGAAAAAAAC
173881 18/20 AAAAAACAAAAAAAAAAAAC
213599 18/20 TTTTTTGTTTTTTTTTTATT
224547 18/20 TTTTTTTTTTTGTTTTTCTT
----------------------------------------------------------------------------
Total sequence length......................... 265547
Total number of repeats detected.............. 16
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 8 6 0 2
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 8 6 0 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7294528|gb|AE003540.1|AE003540 Drosophila melanogaster genomic scaffold 142000013386050 section 27 of 54, complete sequence
Position Repeat-length Repeat
3161 30/33 TTTTTTTTTTTTATTTTTATTTTTTTTTTGTTT
4760 20/22 AAAAAAAAAAAAATAAAAATAA
17016 19/21 TTTTTTTTTTTTTTTTTCTTG
73620 20/22 TTTTTTTTTTTTTTTTTTTTGG
88807 19/21 AAAAAAAAAAAGAAAAAAACA
157274 18/20 TTTTTTTGTATTTTTTTTTT
158960 21/23 TTTTTTTTTTTTGTTTTTTTGTT
159520 23/25 AAAAAAAAAAAAAAACAAAAAAAAT
163355 19/21 TTTTTTTTTTTTTTTTGTTTA
168209 18/20 TTTTTTTTTTTGTTTCTTTT
181647 19/21 AAAAAAAGAAAAAAAAAAAAT
181768 18/20 TTTTTTGTTTTTTGTTTTTT
185515 21/23 TTTTTTGTTATTTTTTTTTTTTT
185903 18/20 AAAAAAGAAAAAAAAAAACA
189627 20/22 TTTTTGTTTTTTTTTTTTTTTG
194162 20/22 TTTTTTATTTTTTTTTTGTTTT
199404 20/22 AAAAACAAAAAAAAAAAAAAAG
203545 26/28 TTTTTTTTTTTTTGTTTTTTTTTGTTTT
212098 20/22 AAAAAAAAAAAAAAAAATGAAA
212914 21/23 TTTTTTTTTTTTTTTATTTTTTG
237624 22/24 AAAAAAAAAAAAAAAAATGAAAAA
238722 20/22 GGGGGGGGGGGGGGGGGGGCGA
258447 18/20 TTTTTTTTTTTTTTTTCCTT
258703 19/21 AAAAAAAAAAAAAAAAAGAAT
283952 18/20 GGGGGGGGGGGGGGGGGGTA
291754 21/23 TTTTTTTTTTTTTTTTTTGCTTT
----------------------------------------------------------------------------
Total sequence length......................... 297385
Total number of repeats detected.............. 26
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 9 14 2 0
30 to 39 0 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 9 15 2 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7294496|gb|AE003539.1|AE003539 Drosophila melanogaster genomic scaffold 142000013386050 section 26 of 54, complete sequence
Position Repeat-length Repeat
8466 19/21 TTTTTTTTTGTTTTTTATTTT
35007 22/24 CCCCCCCCCCCCCCCCCCCCCCAG
39625 24/26 AAAAAAAAAAAAAAAAAAAACAAAAC
40400 24/26 TTTTTTTTTTTTTTTTTTTTTTTGGT
43580 19/21 TTTTTTTTTTTTTTCATTTTT
45486 20/22 TTTTTTTTTTTTTTTGTTTTTG
51265 20/22 TTTTTATTTTTTTTTTTTTTTG
75362 20/22 AAAAATAAAAAAAAAAAAAAAC
91898 19/21 TTTTTTTTTTTTTGTTTGTTT
142125 18/20 TTTTTTTTTTTTTTGTATTT
152055 18/20 TTTTTTATTTTATTTTTTTT
210752 23/25 AAAAAAAAAAAAAGAAAAAAAAAAC
214459 19/21 AAAAAAAAAAAACAAACAAAA
226251 21/23 AAAAAAAAAAAAAAAAAAAAGGA
226825 22/24 TTTTTTTTTTTTTTTTTGTTTTGT
264547 22/24 TTTTTTTTTTTTTTTTTTTGGTTT
265713 18/20 AAAAAAAAAAAAAAACAAAT
267366 18/20 AAAAAAAAAAAAAAAGAAGA
267914 18/20 AAAAAAAAAATAAAAAAACA
270591 31/34 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATGC
----------------------------------------------------------------------------
Total sequence length......................... 271729
Total number of repeats detected.............. 20
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 8 10 0 1
30 to 39 1 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 9 10 0 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7294470|gb|AE003538.1|AE003538 Drosophila melanogaster genomic scaffold 142000013386050 section 25 of 54, complete sequence
Position Repeat-length Repeat
32307 18/20 AAAAAAAAAAAAAAACACAA
55143 19/21 AAAAAAAAAAATAAGAAAAAA
113422 28/31 TTTTTTGTTTTTTTTTTTTTTTTTGTTTTTG
118216 21/23 AAAAAAAAAAAAAAAAACACAAA
121269 23/25 TTTTTTTTTTGGTTTTTTTTTTTTT
161374 21/23 AAAAAAAAAAAAATAAATAAAAA
197535 18/20 TTTTTTTTTTTTTTTTGTTG
211797 23/25 TTTTTATTTTTTTTTTTTTTTTGTT
213166 21/23 AAAAAAAAAAAAAAACAAATAAA
214711 20/22 TTTTTTTTTTTTTTTTTTTTGC
228125 19/21 AAAAAAAAAAAAAAAGGAAAA
248365 19/21 TTTTTTTTTTTTTGTTTTTTA
258292 20/22 AAAAAAAAAAAAAAAAACCAAA
265772 24/26 TTTTTTTTTTTTTTTTTTTTTGTTCT
268469 18/20 TTTTTTTTTTTTTTTGTTTG
270806 21/23 AAAAAAAAAAAAAAAAACAAAAT
----------------------------------------------------------------------------
Total sequence length......................... 303715
Total number of repeats detected.............. 16
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 8 7 0 0
30 to 39 0 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 8 8 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7294453|gb|AE003537.1|AE003537 Drosophila melanogaster genomic scaffold 142000013386050 section 24 of 54, complete sequence
Position Repeat-length Repeat
18584 21/23 AAAAAAAAAAAATAAAAAAAAGA
65079 24/26 TTTTTTTTTTTTTTGTTTTTTGTTTT
77643 18/20 TTTTTTTTTTTATTATTTTT
93014 30/33 AAAAAAAAAAAAAAAAAAAAAAAAAAACCAGAA
128129 22/24 AAAAAACCAAAAAAAAAAAAAAAA
132841 21/23 AAAAAAAAAAAAAAGACAAAAAA
143617 25/27 TTTTTTTTTTTTTTTTTTTTTTTTGGT
145389 22/24 TTTTTATTTTTTGTTTTTTTTTTT
165081 19/21 TTTTTTTTTTTTTTTTTTGTG
186851 18/20 TTTTTTTTTGTTTTCTTTTT
192585 21/23 AAAAAAAAAAAAAATAAAAAATA
193020 28/31 AAAAATAACAAAAAAAAAAAAAAAAAAAAAC
234879 23/25 TTTTTTTTCTTTTTTTTTTTTTTTA
----------------------------------------------------------------------------
Total sequence length......................... 280570
Total number of repeats detected.............. 13
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 4 7 0 0
30 to 39 2 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 6 7 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7294412|gb|AE003536.1|AE003536 Drosophila melanogaster genomic scaffold 142000013386050 section 23 of 54, complete sequence
Position Repeat-length Repeat
13110 18/20 GGGGGGGGGGGGGGGGGGTT
25933 20/22 TTTTTTTCTTTTTTTTTTTGTT
27638 21/23 AAAAACAAAAAAAAAAAAAACAA
33230 18/20 AAAAATGAAAAAAAAAAAAA
127862 19/21 TTTTTTTTTTTTTTTTTGATT
132148 18/20 AAAAAAAATTAAAAAAAAAA
145027 19/21 AAAAATAAAAAAAAAAACAAA
175385 19/21 TTTTTTTTGTTTTTTTTTTTG
178956 18/20 TTTTTCTTTGTTTTTTTTTT
188124 20/22 AAAAAAAATTAAAAAAAAAAAA
209888 18/20 AAAAAAAAAAAAAAGGAAAA
222817 19/21 AAAAAAAAAACAAAAGAAAAA
223545 19/21 AAAAAAAAAAACAAAATAAAA
277545 18/20 AAAAAAAAAAAAAAAAAAGT
278216 18/20 TTTTTTTTTTTTTTTTTTGC
313886 20/22 TTTTTTGTTTTTTTGTTTTTTT
314893 19/21 AAAAAAAAAAAAAAAAAAGGA
320716 19/21 TTTTTTTTTTTTTTTTTGGTT
332659 20/22 AAAAAAAACAAAAAAAAAAAAT
----------------------------------------------------------------------------
Total sequence length......................... 341639
Total number of repeats detected.............. 19
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 11 7 1 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 11 7 1 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7294397|gb|AE003535.1|AE003535 Drosophila melanogaster genomic scaffold 142000013386050 section 22 of 54, complete sequence
Position Repeat-length Repeat
6471 19/21 AAAAACGAAAAAAAAAAAAAA
7072 20/22 AAAAAAAAAAATAAAAACAAAA
10845 21/23 AAAAAAAAAAGAAAAAAAAAACA
20183 19/21 AAAAAAAAAAAAAAAAATGAA
23339 18/20 TTTTTTTCTTTTTTTTTTTG
32376 21/23 AAAAAATAGAAAAAAAAAAAAAA
33027 18/20 TTTTTTTTTTTTTTTTTTGG
56883 27/30 AAAAAAAAAAAAAAAAAAAAAAAAAGAGAT
77824 33/36 AAAAAAAAAAAAAAAAAAAAAAAAAAAATAGGAAAA
97184 33/36 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACTTT
141169 18/20 AAAAAAAAAAAAAAAAACTA
156041 20/22 AAAAAAAATAAAAAAAAAAAAG
157921 30/33 AAAAAAAAAAAAAAAAAAAAAAAAAACCAATAA
201092 18/20 TTTTTTTTTTTGTTTCTTTT
204858 19/21 TTTTTTTTTTCTTTCTTTTTT
220032 21/23 TTTTTTTTTTTTTTTTTTTGCTT
225320 20/22 AAAAAAAAAAAAAACAAATAAA
----------------------------------------------------------------------------
Total sequence length......................... 278748
Total number of repeats detected.............. 17
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 8 5 0 0
30 to 39 3 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 11 6 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7294375|gb|AE003534.1|AE003534 Drosophila melanogaster genomic scaffold 142000013386050 section 21 of 54, complete sequence
Position Repeat-length Repeat
12078 19/21 AAAAAAATACAAAAAAAAAAA
120073 20/22 TTTTTTTTTTTTTTTATTTTTA
133903 19/21 TTTTTTTTTTTACTTTTTTTT
162067 18/20 TTTTTCTTTTTTTTTTTTTG
162175 22/24 TTTTTTTTTTTTTTTGTTATTTTT
167278 18/20 AAAAAACAAAAATAAAAAAA
192586 20/22 TTTTTTTTTTTTTTTGCTTTTT
192740 20/22 TTTTTTGTCTTTTTTTTTTTTT
198595 24/26 AAAAAAAAAAAAAAAAAAAAAACATA
213933 20/22 TTTTTTTTTTTTTTTCTTTTTG
230469 23/25 TTTTTTTTTTTTTTTTTAATTTTTT
----------------------------------------------------------------------------
Total sequence length......................... 280061
Total number of repeats detected.............. 11
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 3 8 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 3 8 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7294349|gb|AE003533.1|AE003533 Drosophila melanogaster genomic scaffold 142000013386050 section 20 of 54, complete sequence
Position Repeat-length Repeat
85182 24/26 TTTTTTTATTATTTTTTTTTTTTTTT
89738 30/33 TTTTTTTTTTTATTTTTTTTTTTTTTGTTGTTT
89850 21/23 TTTTTTTTTTTTTTTTTTTAGTT
103725 21/23 TTTTTATTTTTTTTTTTCTTTTT
104667 18/20 AAAAAAAAAAAGAAAAATAA
108973 23/25 TTTTTTTTTCTTTTTTTTTTTTTGT
115527 23/25 TTTTTTTTTATTTTTTTTTTTTTTA
147386 19/21 AAAAAAAAAAACAAACAAAAA
168256 22/24 AAAAAAAAAAAAAAACAAAAAGAA
184375 23/25 TTTTTTTGTTTTTTTTTTATTTTTT
185366 19/21 AAAAAAACCAAAAAAAAAAAA
193220 19/21 AAAAATAAAATAAAAAAAAAA
195218 23/25 TTTTTTTTTTTTTTTTTTTTTTTAA
227052 18/20 TTTTTTTTATTTTTTTTTTA
245586 20/22 AAAAAAAAAAGAATAAAAAAAA
268581 24/26 AAAAAAAAAAAAAAAAAAAAACAATA
----------------------------------------------------------------------------
Total sequence length......................... 275076
Total number of repeats detected.............. 16
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 7 8 0 0
30 to 39 0 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 7 9 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7294302|gb|AE003532.1|AE003532 Drosophila melanogaster genomic scaffold 142000013386050 section 19 of 54, complete sequence
Position Repeat-length Repeat
4489 21/23 AAAAAAAAAAAAAACAAAAAAAT
11670 18/20 TTTTTTGTTTTTTTTTTTTG
13619 22/24 AAAAAAAATTAAAAAAAAAAAAAA
17583 21/23 AAAAAAAAAAGAAAAAAAATAAA
19936 18/20 AAAAAAAAAAAATAAATAAA
30970 20/22 AAAAAAAAAAATGAAAAAAAAA
73880 23/25 AAAAAAATAAAAAACAAAAAAAAAA
94003 21/23 TTTTTTTTCTTTTTTTTTTTTTG
112276 18/20 AAAAAAAAAAAACAAAAAAG
144270 18/20 AAAAAAAAAAAAAAAAATAG
170486 18/20 AAAAAAAAAAAAAACAAAAC
211936 21/23 TTTTTTTTTTTTTTTTTTTTATC
----------------------------------------------------------------------------
Total sequence length......................... 295377
Total number of repeats detected.............. 12
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 9 3 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 9 3 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7294291|gb|AE003531.1|AE003531 Drosophila melanogaster genomic scaffold 142000013386050 section 18 of 54, complete sequence
Position Repeat-length Repeat
247 20/22 AAAAACAAAAAAAAAAAAAAAT
19138 21/23 AAAAAAAAAAAAAACAAAAAATA
30108 21/23 TTTTTTTTTTTTTTTTTGATTTT
39551 18/20 AAAAAAAAAAAAAAAGAAAG
49752 18/20 AAAAAATATAAAAAAAAAAA
97948 21/23 TTTTTTGCTTTTTTTTTTTTTTT
100817 20/22 AAAAAAAAAAAAAAAAAAACAC
162459 20/22 AAAAAAAAAAAAATAAAATAAA
164792 23/25 TTTTTTTTTTTTTTTTTTTTTTTGG
241178 25/27 AAAAAAAAAAAAAAAAAAAAAACCAAA
248932 19/21 AAAAAAAAAAAATAAAAACAA
263944 28/31 TTTTTTTTTTGTTTTTTTTTTTTTTTGTTTG
264459 18/20 AAAAAAAAAAATAAAATAAA
----------------------------------------------------------------------------
Total sequence length......................... 274277
Total number of repeats detected.............. 13
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 9 3 0 0
30 to 39 0 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 9 4 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7294232|gb|AE003530.1|AE003530 Drosophila melanogaster genomic scaffold 142000013386050 section 17 of 54, complete sequence
Position Repeat-length Repeat
3292 18/20 AAAAAAAAAAAAAACAAAAT
46801 19/21 AAAAAAAAAAAAAAAAGAGAA
64726 20/22 AAAAAAAAAAAAAACAAAAAAT
69272 20/22 AAAAAAAAAAAAAAAAAAACAC
73902 20/22 AAAAAAAAAAAAAAAAGTAAAA
159303 21/23 TTTTTTTTTTTTTTTTTTTGTAT
165056 19/21 TTTTTTTTTTTGTTTTGTTTT
165231 21/23 TTTTTTTTTTTTTTGTTTTTTGT
168700 22/24 AAAAACAAAATAAAAAAAAAAAAA
170698 19/21 TTTTTTCTTTTTTTTTTTTTC
170775 23/25 TTTTTTTTTTTTTTTTTTTGTTTGT
202804 21/23 AAAAAAAAAAAAAAAACCAAAAA
222462 18/20 AAAAAAAAAAAAAAAAAATT
224691 27/30 AAAAACAAAAACAAAAAAAAAAAAAAAAAC
230894 19/21 TTTTTTTTTTTTTGTTTTTCT
277223 18/20 AAAAAAAATAAAAAAAAAAT
----------------------------------------------------------------------------
Total sequence length......................... 279136
Total number of repeats detected.............. 16
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 9 6 0 0
30 to 39 1 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 10 6 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7294198|gb|AE003529.1|AE003529 Drosophila melanogaster genomic scaffold 142000013386050 section 16 of 54, complete sequence
Position Repeat-length Repeat
6453 25/27 TTTTTTTATTTTCTTTTTTTTTTTTTT
21425 18/20 TTTTTTTTTTTTTTGTTTCT
27847 18/20 AAAAAAGAAAAAAAAAATAA
59678 27/30 AAAAAAAAAAAAAAACAAAATAAAAAAAAC
120613 42/46 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCATATT
135858 25/27 AAAAAAAAAAAAAAAAAAAAAACGAAA
165038 18/20 AAAAAAAAAAAAAAAAACAC
178716 19/21 AAAAAAAAAAAAAAAGAAAAT
201531 18/20 AAAAAAAAAAAAAAACAAAT
239776 18/20 AAAAAAAAAAACAAAAATAA
247680 19/21 AAAAAAAAAAAAAATAAGAAA
----------------------------------------------------------------------------
Total sequence length......................... 252224
Total number of repeats detected.............. 11
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 7 2 0 0
30 to 39 1 0 0 0
40 to 49 0 1 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 8 3 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7294145|gb|AE003528.1|AE003528 Drosophila melanogaster genomic scaffold 142000013386050 section 15 of 54, complete sequence
Position Repeat-length Repeat
2919 19/21 TTTTTTTTTTTTTTGTTTTTG
60776 20/22 TTTTTTTTTTTTTTTGTTTTTG
84915 28/31 TTTTTTTTTTTTTTTTTGTTTTTTGTTTTCT
92325 22/24 AAAAAATAAAAAAAAAAACAAAAA
102363 21/23 TTTTTTTTTTTTTTTTTTTCTTA
108570 25/27 TTTTTTTATTTTTGTTTTTTTTTTTTT
120030 26/28 AAAAAAAAAAAAAAAAAAAAAAAAAATT
143053 28/31 AAAAAAAAAAAAAAAAAAAAAAAAAACCAGA
147309 23/25 TTTTTTTTTTTTTTTTTTGTTTTTC
147516 18/20 AAAAAAAAAAAAAAAAAATG
150894 19/21 AAAAAAAAAAACTAAAAAAAA
150963 23/25 AAAAAAAAAAACAAAAAATAAAAAA
156820 19/21 TTTTTTTCTTTCTTTTTTTTT
210196 18/20 AAAAAAAAAATAAAAAATAA
221003 22/24 AAAAAACAAAACAAAAAAAAAAAA
262374 23/25 TTTTTTTTTGTTTTTTTTTTTTTTG
276550 20/22 AAAAAAAAATAAAACAAAAAAA
278500 19/21 TTTTTCTTTTGTTTTTTTTTT
281682 22/24 AAAAACAAAAAAAAAAAAAAGAAA
----------------------------------------------------------------------------
Total sequence length......................... 283712
Total number of repeats detected.............. 19
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 9 8 0 0
30 to 39 1 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 10 9 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7294090|gb|AE003527.1|AE003527 Drosophila melanogaster genomic scaffold 142000013386050 section 14 of 54, complete sequence
Position Repeat-length Repeat
13765 19/21 TTTTTATTTGTTTTTTTTTTT
46682 21/23 TTTTTTTTTTTTTGTTTTTTTCT
53685 22/24 AAAAAAAAAAAAAAAAAACAAATA
60677 20/22 AAAAAAAAAAAAAAAAAAATCA
106144 21/23 AAAAAAAAAAACAAAAAAAAAAT
107891 22/24 AAAAAAAAAAAAAAAAAATAAAAC
116618 21/23 TTTTTTTTGTTTTTTTTTTATTT
117440 19/21 AAAAAAAAAAAAGAAAAAAAC
121502 22/24 TTTTTTTTTTTTATTTTTTTCTTT
125130 32/35 AAAAAAAAAAAAAAAACACAAAAAAAAAAAAAACA
129004 18/20 AAAAACAAAAAAAAAAAGAA
137783 22/24 TTTTTTTTTTTTTTTTTTTTTTAA
141507 20/22 TTTTTTTTTTTTTGTTTATTTT
142506 23/25 AAAAAAAAAAAAAAAAGAAAAAAAT
145082 20/22 TTTTTTTTTTTTTTTTTTGTTA
146223 20/22 AAAAAAAAAAAAAAAAAAAAGG
172526 21/23 AAAAACAAAAAAAAAAAACAAAA
----------------------------------------------------------------------------
Total sequence length......................... 279679
Total number of repeats detected.............. 17
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 9 7 0 0
30 to 39 1 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 10 7 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7294043|gb|AE003526.1|AE003526 Drosophila melanogaster genomic scaffold 142000013386050 section 13 of 54, complete sequence
Position Repeat-length Repeat
8913 18/20 TTTTTTTTTCTTTTTTTTGT
30712 18/20 TTTTTTATTTTATTTTTTTT
36697 21/23 AAAAAAAAAAAAAAAAAAAAATG
63741 24/26 TTTTTTTTTTTTTTTTTTTTTTTGTA
108892 21/23 TTTTTTTTTTTTTTTTTTTTTGG
112088 18/20 TTTTTTCTTTTTTCTTTTTT
169183 19/21 AAAAAAAAAAAAAAAAACAAC
169669 18/20 TTTTTCTTTTTTTTTTTTTG
174494 18/20 AAAAAAAAAAAAAAAAATAG
209727 19/21 TTTTTTTTTTTTTTTTGTTTA
212983 21/23 TTTTTGTTTTTTTTTTTTTTATT
215705 20/22 AAAAAAAAAAAAAAAAAAGAAC
226104 18/20 AAAAAAAATAAAAGAAAAAA
231318 18/20 AAAAAAAAAAGAAAAAAGAA
----------------------------------------------------------------------------
Total sequence length......................... 280887
Total number of repeats detected.............. 14
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 6 8 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 6 8 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7294009|gb|AE003525.1|AE003525 Drosophila melanogaster genomic scaffold 142000013386050 section 12 of 54, complete sequence
Position Repeat-length Repeat
18895 20/22 TTTTTTTTTTTTTTTTTTGTTC
29904 21/23 AAAAAAAAAAAAAAAAAGAAATA
35818 19/21 AAAAAAAAAAGAAAAAAAAAC
36511 19/21 AAAAAAAAAATTAAAAAAAAA
41482 18/20 AAAAAAAAAAACAAAAAAAT
42318 19/21 AAAAAAAAAAAAATAAATAAA
59012 21/23 TTTTTTTATTTTCTTTTTTTTTT
59213 21/23 AAAAAAAAAATAACAAAAAAAAA
89577 18/20 AAAAAATAGAAAAAAAAAAA
95396 20/22 AAAAAAAAAAAAAAAACAGAAA
96690 18/20 AAAAAAAAAAAGAACAAAAA
110080 23/25 TTTTTTTTTTTCATTTTTTTTTTTT
117681 18/20 AAAAACAAAAAAAAAACAAA
118682 23/25 AAAAAAAAAAAACCAAAAAAAAAAA
124243 21/23 TTTTTTTTGTTTTTTTTTTCTTT
153503 18/20 TTTTTTGTTTTTTTTTTTTG
155591 21/23 TTTTTTTCTTTTTTTTTTTTTTG
157048 29/32 AAAAAAAAAAAAAAAAGAAAAAAACAAAAACA
180972 18/20 AAAAAAATAAAAAAAAAACA
220702 18/20 AAAAAAAAAAAAAAAGAACA
242059 24/26 AAAAAAAAAAAAAAAAAAAGAAACAA
249016 19/21 AAAAAAAAAAAAAAAAAACAC
----------------------------------------------------------------------------
Total sequence length......................... 291880
Total number of repeats detected.............. 22
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 15 6 0 0
30 to 39 1 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 16 6 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7293975|gb|AE003524.1|AE003524 Drosophila melanogaster genomic scaffold 142000013386050 section 11 of 54, complete sequence
Position Repeat-length Repeat
1258 23/25 AAAAAAAAAACAAAAAAAAAAAACA
17641 18/20 TTTTTTTCTTCTTTTTTTTT
23754 22/24 TTTTTTTATTTGTTTTTTTTTTTT
38786 21/23 AAAAAAAAAAAAAATAAAACAAA
116042 22/24 TTTTTTTTTTTTTTTTTTAATTTT
161561 21/23 TTTTTTTTTTTTTTTTTGTTTGT
178089 22/24 AAAAAAAAAAAAAAAAAACAAAGA
200952 18/20 TTTTTTTTTTTTTTTAATTT
206257 27/30 TTTTTTTTTTTTTTTTTTTTTTTTTTGTGG
219587 23/25 TTTTTTTTTTTTTTTTTGTTTCTTT
224381 20/22 TTTTTTTGTTTTTTTTTTTTTG
229221 23/25 AAAAAAAAAAAAAAAAAAAAACCAA
242615 21/23 TTTTTCGTTTTTTTTTTTTTTTT
242867 26/28 AAAAAAAAACAAAAAAAAACAAAAAAAA
247378 18/20 TTTTTTTTTTTTTTTTTGTA
262305 18/20 AAAAACAAGAAAAAAAAAAA
266825 18/20 TTTTTTTTTTTTTTTTGTTG
334201 18/20 AAAAAAATATAAAAAAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 335868
Total number of repeats detected.............. 18
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 7 10 0 0
30 to 39 0 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 7 11 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7293946|gb|AE003523.1|AE003523 Drosophila melanogaster genomic scaffold 142000013386050 section 10 of 54, complete sequence
Position Repeat-length Repeat
25949 19/21 AAAAAAAAAAAAACAGAAAAA
45812 21/23 TTTTTTTTTTTTTTTTTTTTTAA
46071 25/27 TTTTTATTTTTTTTTTTTTTTTGTTTT
46144 22/24 TTTTTTTTTTTTTTTTTTTTGTTC
46274 19/21 AAAAAAAAAAAAAAAAAATTA
116063 19/21 AAAAATACAAAAAAAAAAAAA
116928 20/22 AAAAAAAAAAAAAAAAAAAACT
164353 24/26 AAAAAACAAAAAAAAAAAAAAAAACA
168448 22/24 TTTTTTTTTTTTTTTTGTTTTTTG
205088 20/22 TTTTTTTTTTTTCTTTTTTTGT
214228 20/22 AAAAAAAAGAAAAAAAAAAAAC
240235 21/23 CCCCCCCCCCCCCCCCCCCCGAC
----------------------------------------------------------------------------
Total sequence length......................... 283337
Total number of repeats detected.............. 12
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 6 5 0 1
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 6 5 0 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7293918|gb|AE003522.1|AE003522 Drosophila melanogaster genomic scaffold 142000013386050 section 9 of 54, complete sequence
Position Repeat-length Repeat
40568 19/21 AAAAAAAAAAAGAAAAAACAA
42729 19/21 AAAAAAAGAAAAAAAACAAAA
45771 18/20 TTTTTTTGTTTGTTTTTTTT
63521 18/20 AAAAAAAAAAAAAGAAAAGA
67979 23/25 AAAAAAAAAAAAAAAAAAAAAAACG
78832 18/20 AAAAAAAAACAAAGAAAAAA
84710 20/22 TTTTTTTTTTTTATATTTTTTT
95966 20/22 TTTTTATTTTATTTTTTTTTTT
113845 18/20 CCCCCCTTCCCCCCCCCCCC
114157 21/23 AAAAAAAAAAAAAGAAAAAAAAG
129050 18/20 AAAAAAAAAACAAAAAACAA
141345 20/22 AAAAAAAAACAAAAAAACAAAA
142849 18/20 AAAAAAAGAAAAAAAAAAAC
223324 18/20 AAAAAAAAAAAAAAAACTAA
262047 22/24 AAAAAAAAAAAAAAAAAAAAAATT
265699 18/20 AAAAAAACAAAAAATAAAAA
283703 20/22 TTTTTTTTTTGTTTTTTTTTTG
285880 32/35 TTTTTTTGTTTTTTTTTTTTGTTTTTTTTTTTTGT
----------------------------------------------------------------------------
Total sequence length......................... 290837
Total number of repeats detected.............. 18
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 12 4 0 1
30 to 39 0 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 12 5 0 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7293901|gb|AE003521.1|AE003521 Drosophila melanogaster genomic scaffold 142000013386050 section 8 of 54, complete sequence
Position Repeat-length Repeat
15477 18/20 TTTTTTTTTTTTTTTGTTTG
24862 18/20 TTTTTTTTTGTTTTTTTATT
83469 19/21 AAAAACTAAAAAAAAAAAAAA
99674 20/22 TTTTTTTTTTTTTTATATTTTT
107239 22/24 TTTTTCTTTTTTTTTTTTTTTTGT
115912 23/25 AAAAAAACAAAAAAAAAAAAAAAGA
117747 18/20 AAAAAAAAAATAAAAACAAA
125155 20/22 AAAAAAAAATATAAAAAAAAAA
129504 18/20 TTTTTTTTTTTTTTATATTT
140307 21/23 AAAAAAAAAAAAATAAATAAAAA
151099 19/21 TTTTTTTTTTTTTTTTTGTTG
151569 20/22 TTTTTTTTTTTTTTTTTGTTTG
159117 18/20 TTTTTTTTTTTTTTTTTGCT
174010 22/24 TTTTTTCTTTTTTTTTTTTTTTTG
176292 23/25 AAAAAAAAAAAACAAAAAAAAAACA
176498 18/20 AAAAAAAAAAAAATAAAATA
179444 21/23 CCCCCTCCCCCCCCCCCCCCCCT
187222 19/21 AAAAACAAAAAAAAAAAAGAA
204977 18/20 TTTTTTTATTTTTATTTTTT
218262 20/22 AAAAAAAAAAAAAAAAAGAGAA
221505 20/22 TTTTTCTTTTATTTTTTTTTTT
249636 21/23 TTTTTTTTTTTTATTTTTTTTTG
261725 21/23 AAAAAAAAAACAAAACAAAAAAA
270607 18/20 AAAAAAAAAAAAAAAAAAGC
----------------------------------------------------------------------------
Total sequence length......................... 271237
Total number of repeats detected.............. 24
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 11 12 0 1
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 11 12 0 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7293883|gb|AE003520.1|AE003520 Drosophila melanogaster genomic scaffold 142000013386050 section 7 of 54, complete sequence
Position Repeat-length Repeat
3167 18/20 TTTTTTTTTTTTTTTGGTTT
4336 20/22 TTTTTGTTTTTATTTTTTTTTT
9790 18/20 GGGGGGGGGGGGGGGGTGAG
15515 18/20 AAAAAAAAAAAAAAAACGAA
29610 18/20 AAAAAATTAAAAAAAAAAAA
47280 24/26 TTTTTTTTTTTTTTTTTTTTTTAATT
97820 18/20 AAAAAAAAAAAAAAAAGAAG
106415 18/20 AAAAAAAAAAAAAAAAATCA
200651 18/20 AAAAAAAAAACAAAAACAAA
235652 18/20 AAAAAAAAAAAAAAAAAACT
247918 21/23 AAAAATAAAAAGAAAAAAAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 292222
Total number of repeats detected.............. 11
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 7 3 1 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 7 3 1 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7293842|gb|AE003519.1|AE003519 Drosophila melanogaster genomic scaffold 142000013386050 section 6 of 54, complete sequence
Position Repeat-length Repeat
27081 18/20 AAAAAAAAAAAAAAAAAACT
68860 20/22 TTTTTGTTTTTTTTTTTTTTTC
133363 18/20 TTTTTTTTGTGTTTTTTTTT
136517 29/32 AAAAAAAAAAAAAAAAAAAAAAAAAGAAGCAA
139226 19/21 AAAAAAAAAAAAAAAAAATCA
152329 19/21 TTTTTTTGTTTTTTTTTTTTG
152893 24/26 AAAAAAAAAAAAAAAAAAAAAACCAA
194491 18/20 GGGGGTGGGGGGGGGTGGGG
201417 21/23 AAAAAAAAAAAAAAAAAACAACA
202275 21/23 AAAAAAAAAAAAAAAAAAATAAC
207891 20/22 AAAAAAAAAAAAAAAAAAAAGG
207996 26/28 AAAAAAAAAAATATAAAAAAAAAAAAAA
211463 20/22 AAAAATACAAAAAAAAAAAAAA
226728 19/21 TTTTTTTTTTTTTTTTTCATT
227802 22/24 TTTTTTTTTTTTTTTTTTTTTGGT
262935 27/30 TTTTTTTTTTTTTTTTTTTTTTTTTGTGTC
----------------------------------------------------------------------------
Total sequence length......................... 276243
Total number of repeats detected.............. 16
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 8 5 1 0
30 to 39 1 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 9 6 1 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7293817|gb|AE003518.1|AE003518 Drosophila melanogaster genomic scaffold 142000013386050 section 5 of 54, complete sequence
Position Repeat-length Repeat
30368 20/22 AAAAAAAAAAAAAAAGAAAAAC
41709 21/23 AAAAAAAAAAAAAAAAAAAATGA
47871 23/25 AAAAAAAAAAACAAAAAAAACAAAA
76177 19/21 AAAAAAAAAAAAAAATCAAAA
76232 24/26 AAAAATAAAACAAAAAAAAAAAAAAA
76502 48/53 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATCCAAAAT
114824 18/20 TTTTTTTTTTTTTTCGTTTT
127998 19/21 AAAAAAATATAAAAAAAAAAA
159984 18/20 AAAAAGCAAAAAAAAAAAAA
168899 19/21 TTTTTTTTTTTTTTTGTGTTT
172530 28/31 AAAAAAAAAAAAACAAAAACAAAAAAAAAAT
173281 18/20 AAAAAAAAAAAATAAAACAA
175234 19/21 TTTTTCGTTTTTTTTTTTTTT
183796 19/21 AAAAACACAAAAAAAAAAAAA
190370 26/28 TTTTTATTTTTTTTTTTTTTTTTTTATT
259574 20/22 TTTTTTTTTTTTTTTTTTTTGA
----------------------------------------------------------------------------
Total sequence length......................... 280289
Total number of repeats detected.............. 16
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 9 5 0 0
30 to 39 1 0 0 0
40 to 49 0 0 0 0
50 to 59 1 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 11 5 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7293794|gb|AE003517.1|AE003517 Drosophila melanogaster genomic scaffold 142000013386050 section 4 of 54, complete sequence
Position Repeat-length Repeat
58109 19/21 AAAAAAAAAAAAAAAAAAATG
59516 19/21 GGGGGGGGGGGGGGGGGCGGT
77804 24/26 TTTTTTTTTTTTTTTTTTTTTAATTT
96712 18/20 TTTTTATATTTTTTTTTTTT
111309 19/21 AAAAAAAAAAAAAAAAAACAC
232044 24/26 AAAAATCAAAAAAAAAAAAAAAAAAA
248901 29/32 AAAAATTAAAAAAAAAAAAAAAAAAAAAAAAC
----------------------------------------------------------------------------
Total sequence length......................... 257672
Total number of repeats detected.............. 7
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 3 2 1 0
30 to 39 1 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 4 2 1 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7293747|gb|AE003516.1|AE003516 Drosophila melanogaster genomic scaffold 142000013386050 section 3 of 54, complete sequence
Position Repeat-length Repeat
6478 26/28 AAAAAAAAAAAAAAAAAAAAAAAAAAGC
7199 35/38 TTTTTTTTTTTTGTTTTTTTTTTGTTTTTTTTTTTTAT
18505 19/21 AAAAAAAAAAAAAAAGACAAA
37890 26/28 AAAAATTAAAAAAAAAAAAAAAAAAAAA
79365 29/32 TTTTTTTTTTTTTTTGTTTTTTTTTTTGTTCT
95534 26/28 AAAAAAAAAAAAAAAAAAAAAAAAAGAG
100389 21/23 AAAAAAAAAAAAAAAAAAGAAGA
186029 18/20 TTTTTTTTTTTATATTTTTT
----------------------------------------------------------------------------
Total sequence length......................... 287649
Total number of repeats detected.............. 8
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 5 1 0 0
30 to 39 0 2 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 5 3 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7293706|gb|AE003515.1|AE003515 Drosophila melanogaster genomic scaffold 142000013386050 section 2 of 54, complete sequence
Position Repeat-length Repeat
26055 23/25 TTTTTTTTTTTTTTTTTTTTTTGTC
27856 33/36 TTTTTTTTTTTTTTTTTTTTTTTTTTGTATTTTATT
56439 28/31 TTTTTTTTTTTTTTTTTTTTTTATTATTTTG
107197 18/20 TTTTTTTTTTTTTTTCATTT
107721 23/25 AAAAAAAAAAAATAAAAATAAAAAA
115167 23/25 TTTTTTTTTCTTTTTTTTTTTTTTG
145865 23/25 TTTTTTTTTTTTTTTTTTTTTTTAA
221779 18/20 TTTTTTGTTATTTTTTTTTT
----------------------------------------------------------------------------
Total sequence length......................... 273521
Total number of repeats detected.............. 8
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 1 5 0 0
30 to 39 0 2 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 1 7 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7293659|gb|AE003514.1|AE003514 Drosophila melanogaster genomic scaffold 142000013386050 section 1 of 54, complete sequence
Position Repeat-length Repeat
54925 19/21 AAAAAAATATAAAAAAAAAAA
59025 22/24 TTTTTTATTTTATTTTTTTTTTTT
67070 19/21 GGGGGGGGGGGGGGGGGGTTG
123715 22/24 TTTTTTTTTTTTTTTTTTATTATT
148543 25/27 TTTTTTTTTTTTTTTTTTTTTTGGTTT
162315 25/27 AAAAAAAAAAAAAAAAAAGAGAAAAAA
231375 18/20 CCCCCCCCCCCCACCCCCCT
258739 18/20 AAAAAAAAAAAAAGGAAAAA
269453 21/23 TTTTTGTTTTTTTTTTTTTTTTG
----------------------------------------------------------------------------
Total sequence length......................... 274668
Total number of repeats detected.............. 9
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 3 4 1 1
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 3 4 1 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289390|gb|AE003204.1|AE003204 Drosophila melanogaster genomic scaffold 142000013385626, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 14074
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289766|gb|AE003242.1|AE003242 Drosophila melanogaster genomic scaffold 142000013385958, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 20950
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7288950|gb|AE002969.1|AE002969 Drosophila melanogaster genomic scaffold 142000013385262, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 19560
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289605|gb|AE002867.1|AE002867 Drosophila melanogaster genomic scaffold 142000013385810, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 1179
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289134|gb|AE003115.1|AE003115 Drosophila melanogaster genomic scaffold 142000013385416, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 3101
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7316094|gb|AE002647.1|AE002647 Drosophila melanogaster genomic scaffold 142000013386036, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 0
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7296579|gb|AE003599.1|AE003599 Drosophila melanogaster genomic scaffold 142000013386036 section 9 of 9, complete sequence
Position Repeat-length Repeat
30523 18/20 CCCCCGCCCCCGCCCCCCCC
62524 18/20 GGGGGGGGGGGGGGGGGCAG
66358 21/23 TTTTTTTTTTTTTTTTTTTTATA
135850 19/21 TTTTTTTTTTTTTTTTGTTTG
213567 21/23 AAAAAAAAAAAAAAAAATACAAA
226090 21/23 TTTTTTTTTTTTTTTTGTTTTTG
234658 24/26 TTTTTTTTTGTTTTTTTTTTTTTGTT
----------------------------------------------------------------------------
Total sequence length......................... 242396
Total number of repeats detected.............. 7
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 1 4 1 1
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 1 4 1 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7296549|gb|AE003598.1|AE003598 Drosophila melanogaster genomic scaffold 142000013386036 section 8 of 9, complete sequence
Position Repeat-length Repeat
22251 18/20 AAAAAAAAAAAATAAAAAAT
67018 20/22 AAAAAAAAAAAAGAAACAAAAA
93035 26/28 AAAAAAAAAAAAAAAAAAAAAAAAAACT
119194 19/21 AAAAACAAAAAAAAAAAAAAC
145618 26/28 TTTTTTTTTTTTTTTTTTTTTTTTTTGG
214539 22/24 TTTTTTTTTTTTTTTTTTTTGGTT
263611 24/26 AAAAAAAAAAAAAAACAAAAAAAGAA
297274 19/21 AAAAAAAAAAAAATGAAAAAA
300263 23/25 TTTTTCTGTTTTTTTTTTTTTTTTT
----------------------------------------------------------------------------
Total sequence length......................... 303162
Total number of repeats detected.............. 9
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 6 3 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 6 3 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7296525|gb|AE003597.1|AE003597 Drosophila melanogaster genomic scaffold 142000013386036 section 7 of 9, complete sequence
Position Repeat-length Repeat
31823 30/33 TTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTGA
62591 24/26 TTTTTTTATTTTTTTTTTTTTTGTTT
83952 22/24 AAAAAAAAAAAAAGAAACAAAAAA
115167 20/22 CCCCCCCCCCCCCCCCCCCTCT
144392 18/20 CCCCCCCCCCCCCCCCCACA
227354 21/23 TTTTTTTGTTTTTTTTCTTTTTT
288815 22/24 AAAAAAATCAAAAAAAAAAAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 295566
Total number of repeats detected.............. 7
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 2 2 0 2
30 to 39 0 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 2 3 0 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7296506|gb|AE003596.1|AE003596 Drosophila melanogaster genomic scaffold 142000013386036 section 6 of 9, complete sequence
Position Repeat-length Repeat
47128 29/32 AAAAAAAAAAAAAAAAAAAAAAAAAAAAACTG
256577 20/22 AAAAAAAAAAAAAAAAATGAAA
274682 23/25 TTTTTTTTTTTTTTTTTGTTTTTTG
302706 19/21 AAAAAAAAAAAAACAGAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 318817
Total number of repeats detected.............. 4
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 2 1 0 0
30 to 39 1 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 3 1 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7296463|gb|AE003595.1|AE003595 Drosophila melanogaster genomic scaffold 142000013386036 section 5 of 9, complete sequence
Position Repeat-length Repeat
57132 21/23 TTTTTTTTTTTTTTTTTTACTTT
65757 25/27 AAAAAAAAAAAAAAAAAAAAACAATAA
74018 18/20 CCCCCCACCCCCCCCCCCCA
168859 23/25 TTTTTTTTTTTTTTTTTTTTTTTAC
191450 21/23 AAAAATCAAAAAAAAAAAAAAAA
280892 31/34 AAAAAAACAAAAAAAAAAAAAAAACAAAATAAAA
----------------------------------------------------------------------------
Total sequence length......................... 294257
Total number of repeats detected.............. 6
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 2 2 0 1
30 to 39 1 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 3 2 0 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7296405|gb|AE003594.1|AE003594 Drosophila melanogaster genomic scaffold 142000013386036 section 4 of 9, complete sequence
Position Repeat-length Repeat
16277 21/23 AAAAAAAAAAAAAAAAAACAAAT
87899 20/22 AAAAAAAAAAAAAAAAAAAATT
110250 20/22 TTTTTTTTTTATTTTTTTTCTT
114747 23/25 TTTTTTTTTTTCTTTTTTCTTTTTT
133401 21/23 TTTTTTTTTTTTTTTTTTGATTT
176823 28/31 AAAAAAAAAAAAAAAAAAAAAAAAAAGAACC
190092 19/21 AAAAAATCAAAAAAAAAAAAA
270784 18/20 AAAAAATAAAAAAAAAAAAC
----------------------------------------------------------------------------
Total sequence length......................... 305516
Total number of repeats detected.............. 8
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 4 3 0 0
30 to 39 1 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 5 3 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7296371|gb|AE003593.1|AE003593 Drosophila melanogaster genomic scaffold 142000013386036 section 3 of 9, complete sequence
Position Repeat-length Repeat
18075 18/20 TTTTTTTATTTTTTTTGTTT
52014 27/30 AAAAAAACAAAAAAAAAAAAAAAAAAAACG
87014 25/27 AAAAAAAAAAAAAAAAAAAAAAAAACT
89094 20/22 CCCCCAGCCCCCCCCCCCCCCC
89863 18/20 GGGGGGGGGGGGTGGGGGTG
93328 19/21 TTTTTTTTTTTTTTTTTTGGT
106916 23/25 TTTTTTTTTTTTTTTTTTTTTTAAT
127174 22/24 AAAAAAAAAAAAAAAAAACAAAAC
132246 21/23 AAAAAAAAAAAAAAAAATTAAAA
145008 21/23 AAAAAATAAAAAAAAATAAAAAA
168085 32/35 TTTTTTACTTTTTTTTTTTTTTTTTTTTTTTTTTG
243601 21/23 AAAAAAAAAAAAAACAATAAAAA
263402 26/28 AAAAAAAAAAAAAAAAAAAAAAAAAACC
291100 22/24 TTTTTTTTTTTTTTTTTTTTTTGA
----------------------------------------------------------------------------
Total sequence length......................... 313115
Total number of repeats detected.............. 14
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 6 4 1 1
30 to 39 1 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 7 5 1 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7296338|gb|AE003592.1|AE003592 Drosophila melanogaster genomic scaffold 142000013386036 section 2 of 9, complete sequence
Position Repeat-length Repeat
42253 18/20 AAAAAAACAAAACAAAAAAA
66336 22/24 TTTTTTTTTTTTTTGTTTTGTTTT
68215 19/21 TTTTTTTTTTTTTTTTTTCTC
89580 18/20 AAAAACAAAAAAAAGAAAAA
101858 18/20 AAAAAAGAAAAAAAAAAACA
111558 25/27 TTTTTTTTTTTTTTTTTTTTTTTTTGC
134279 22/24 TTTTTTTTTTTTTTTTTTTTTGCT
141926 21/23 AAAAAAAAAAAAAAAAAAAAGTA
198541 18/20 AAAAAAAAAAAAAAAAAACG
267063 18/20 TTTTTTTTTTTTTTTTTTGC
305807 20/22 AAAAAAAAAAAAAAAAAGCAAA
306448 22/24 TTTTTTTTCTTTTTTTTTTTTTTG
306593 22/24 AAAAAAAAAAAAAAATAAAATAAA
318638 18/20 AAAAAAAAAAAACAAATAAA
----------------------------------------------------------------------------
Total sequence length......................... 322667
Total number of repeats detected.............. 14
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 8 6 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 8 6 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7296281|gb|AE003591.1|AE003591 Drosophila melanogaster genomic scaffold 142000013386036 section 1 of 9, complete sequence
Position Repeat-length Repeat
2141 21/23 TTTTTTTATTTATTTTTTTTTTT
2206 27/30 TTTTTTTTTTGGTTTTTTTTTTTTTTTTTA
22149 21/23 TTTTTTTTTTTTTTTTGTTTCTT
27320 18/20 TTTTTATTTTTTTTTGTTTT
73449 20/22 AAAAAAAAAAAAAAAAAACAAC
85101 19/21 AAAAACCAAAAAAAAAAAAAA
85631 27/30 AAAAAAAAAAAAAAAAAAAAAAAAAACACC
117223 20/22 TTTTTTTTTTTTTTTGTTTGTT
193741 20/22 TTTTTTTTATTTTTTTTTTTTG
205638 25/27 AAAAAAAAAAAAAAAACAAAAACAAAA
212016 22/24 TTTTTTTTTTTTTTTTTTTTTTGG
214368 20/22 AAAAAACTAAAAAAAAAAAAAA
217398 20/22 TTTTTTTCGTTTTTTTTTTTTT
225900 19/21 CCCCCCCCCCCCCCCGCCCCG
240651 20/22 TTTTTTTTTTTTTTATTATTTT
255516 24/26 AAAAAAAAAAACAAAAACAAAAAAAA
266640 21/23 TTTTTTTTTTATTTTTTTATTTT
270471 21/23 AAAAAAAAAAAAAATAAATAAAA
280264 19/21 TTTTTTTTTTTTGTTTTTTTG
283889 24/26 AAAAAAAAAAAAAAAAAAAACGAAAA
285095 19/21 TTTTTTTTTTTTTTAGTTTTT
294317 20/22 TTTTTTTTTTTTTTTTTTTGGT
----------------------------------------------------------------------------
Total sequence length......................... 297877
Total number of repeats detected.............. 22
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 7 12 0 1
30 to 39 1 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 8 13 0 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289763|gb|AE002698.1|AE002698 Drosophila melanogaster genomic scaffold 142000013385955, complete sequence
Position Repeat-length Repeat
676 24/26 AAAAAAAAAAAAAAAACAAGAAAAAA
1046 19/21 AAAAAAATAAAAAAAAAAAAT
----------------------------------------------------------------------------
Total sequence length......................... 3074
Total number of repeats detected.............. 2
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 2 0 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 2 0 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289744|gb|AE002786.1|AE002786 Drosophila melanogaster genomic scaffold 142000013385942, complete sequence
Position Repeat-length Repeat
3374 23/25 TTTTTTTTTTTTTTTTTTTTATTTC
----------------------------------------------------------------------------
Total sequence length......................... 46468
Total number of repeats detected.............. 1
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 0 1 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 0 1 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289859|gb|AE002656.1|AE002656 Drosophila melanogaster genomic scaffold 142000013386032, complete sequence
Position Repeat-length Repeat
159293 20/22 AAAAAAAAAAAAAAAATAATAA
159531 24/26 AAAAATAAACAAAAAAAAAAAAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 192318
Total number of repeats detected.............. 2
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 2 0 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 2 0 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289180|gb|AE002893.1|AE002893 Drosophila melanogaster genomic scaffold 142000013385459, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 12718
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289879|gb|AE002612.1|AE002612 Drosophila melanogaster genomic scaffold 142000013386048, complete sequence
Position Repeat-length Repeat
15101 18/20 TTTTTGTTTTTTTTTATTTT
33790 33/36 TTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTTATT
34822 29/32 TTTTTTTTTTTTTTTTTTTTTTTTGATTTTTC
60043 21/23 TTTTTTTTTTTTTTTGCTTTTTT
----------------------------------------------------------------------------
Total sequence length......................... 62039
Total number of repeats detected.............. 4
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 0 2 0 0
30 to 39 0 2 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 0 4 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7288924|gb|AE002622.1|AE002622 Drosophila melanogaster genomic scaffold 142000013385237, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 19569
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7288927|gb|AE002700.1|AE002700 Drosophila melanogaster genomic scaffold 142000013385240, complete sequence
Position Repeat-length Repeat
10965 20/22 TTTTTTTTTTTTTTTTTTTGTA
17889 19/21 AAAAATAACAAAAAAAAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 27887
Total number of repeats detected.............. 2
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 1 1 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 1 1 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289063|gb|AE002771.1|AE002771 Drosophila melanogaster genomic scaffold 142000013385352, complete sequence
Position Repeat-length Repeat
584 19/21 AAAAAAAAAAAAAAAAAAAGG
----------------------------------------------------------------------------
Total sequence length......................... 12661
Total number of repeats detected.............. 1
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 1 0 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 1 0 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289072|gb|AE002945.1|AE002945 Drosophila melanogaster genomic scaffold 142000013385361, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 24781
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289452|gb|AE002985.1|AE002985 Drosophila melanogaster genomic scaffold 142000013385679, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 14450
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289817|gb|AE003107.1|AE003107 Drosophila melanogaster genomic scaffold 142000013386005, complete sequence
Position Repeat-length Repeat
280 19/21 TTTTTTTTTTTTTTTTTTTGC
----------------------------------------------------------------------------
Total sequence length......................... 3855
Total number of repeats detected.............. 1
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 0 1 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 0 1 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289498|gb|AE003116.1|AE003116 Drosophila melanogaster genomic scaffold 142000013385716, complete sequence
Position Repeat-length Repeat
3566 18/20 TTTTTTTTTTTGTTATTTTT
3679 20/22 TTTTTTTTTTTTTTTTTTTTGG
3768 22/24 TTTTTGTTTTTTTTTTTGTTTTTT
42945 24/26 TTTTTTTTTTTTTTTTTTTTTTTATA
45523 21/23 TTTTTTTTGTTTTTTTTTTTTAT
----------------------------------------------------------------------------
Total sequence length......................... 47681
Total number of repeats detected.............. 5
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 0 5 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 0 5 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289428|gb|AE003123.1|AE003123 Drosophila melanogaster genomic scaffold 142000013385660, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 1928
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289557|gb|AE003131.1|AE003131 Drosophila melanogaster genomic scaffold 142000013385771, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 18252
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289011|gb|AE003041.1|AE003041 Drosophila melanogaster genomic scaffold 142000013385314, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 20379
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289447|gb|AE002665.1|AE002665 Drosophila melanogaster genomic scaffold 142000013385677, complete sequence
Position Repeat-length Repeat
13325 18/20 AAAAAAAAAATATAAAAAAA
17531 19/21 TTTTTTTTTTTTTTTTTATGT
27966 21/23 AAAAAAAATAAATAAAAAAAAAA
70462 21/23 TTTTTTTTTTTTTTTTTGATTTT
105216 20/22 TTTTTTTTTTTTTTTATTATTT
----------------------------------------------------------------------------
Total sequence length......................... 111329
Total number of repeats detected.............. 5
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 2 3 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 2 3 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289124|gb|AE002673.1|AE002673 Drosophila melanogaster genomic scaffold 142000013385408, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 11578
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7288933|gb|AE002585.1|AE002585 Drosophila melanogaster genomic scaffold 142000013385245, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 3866
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7288940|gb|AE002772.1|AE002772 Drosophila melanogaster genomic scaffold 142000013385252, complete sequence
Position Repeat-length Repeat
1196 18/20 GGGGGGGGGGGGGGGGTGTG
9388 23/25 TTTTTATTTTTTTGTTTTTTTTTTT
----------------------------------------------------------------------------
Total sequence length......................... 17099
Total number of repeats detected.............. 2
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 0 1 1 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 0 1 1 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289795|gb|AE003009.1|AE003009 Drosophila melanogaster genomic scaffold 142000013385983, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 5331
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289101|gb|AE003147.1|AE003147 Drosophila melanogaster genomic scaffold 142000013385388, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 12069
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7288946|gb|AE003235.1|AE003235 Drosophila melanogaster genomic scaffold 142000013385258, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 15690
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289104|gb|AE003139.1|AE003139 Drosophila melanogaster genomic scaffold 142000013385390, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 53962
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Mono-Nucleotide Repeats in Drosophila melanogaster Chromosome-Arm-3L Genomic Scaffolds
Minimum repeat length = 20 (allowing maximum 10% mismatch)
Total 111 sequences searched with 23674253 base pairs
Total 1330 repeats covering 27752 / 30504 base pairs
Length distribution of all Mono-nucleotide repeats
--------------------------------------------------------------------------------------------------------
repeat-length 20-29 30-39 40-49 50-59 60-69 70-79 80-89 90-99 100-and-more
no. of repeats 1249 73 6 1 1 0 0 0 0
---------------------------------------------------------------------------------------------------------
Number of repeats
----------------------------------------------------------------------------------------
Sequence A T G C
----------------------------------------------------------------------------------------
gi|7316100|gb|AE002584.1| 0 bp 0 0 0 0
gi|7292550|gb|AE003483.1| 175489 bp 7 7 0 0
gi|7292521|gb|AE003482.1| 301682 bp 5 7 1 0
gi|7292481|gb|AE003481.1| 319765 bp 11 4 0 1
gi|7292415|gb|AE003480.1| 310450 bp 3 4 0 0
gi|7292381|gb|AE003479.1| 309883 bp 11 11 0 0
gi|7292360|gb|AE003478.1| 317218 bp 11 9 0 0
gi|7292303|gb|AE003477.1| 304734 bp 8 3 0 1
gi|7292275|gb|AE003476.1| 306945 bp 10 9 0 0
gi|7292236|gb|AE003475.1| 304231 bp 11 3 1 0
gi|7292198|gb|AE003474.1| 306364 bp 7 7 0 1
gi|7292168|gb|AE003473.1| 304106 bp 6 8 0 1
gi|7292093|gb|AE003472.1| 303191 bp 6 2 0 0
gi|7292041|gb|AE003471.1| 301109 bp 9 7 0 0
gi|7292017|gb|AE003470.1| 302423 bp 9 7 1 0
gi|7291982|gb|AE003469.1| 301868 bp 8 0 0 0
gi|7291959|gb|AE003468.1| 310120 bp 8 7 0 0
gi|7291904|gb|AE003467.1| 298644 bp 3 4 0 0
gi|7316103|gb|AE002602.1| 0 bp 0 0 0 0
gi|7295475|gb|AE003567.1| 104808 bp 8 8 0 0
gi|7295459|gb|AE003566.1| 286716 bp 9 18 0 0
gi|7295423|gb|AE003565.1| 286782 bp 11 9 1 0
gi|7295378|gb|AE003564.1| 301840 bp 8 8 0 1
gi|7295346|gb|AE003563.1| 277325 bp 4 6 0 0
gi|7295332|gb|AE003562.1| 249584 bp 4 8 0 0
gi|7295317|gb|AE003561.1| 274307 bp 11 10 0 0
gi|7295278|gb|AE003560.1| 285495 bp 8 12 0 1
gi|7295229|gb|AE003559.1| 269454 bp 10 10 2 2
gi|7295193|gb|AE003558.1| 273744 bp 9 9 0 0
gi|7295172|gb|AE003557.1| 286418 bp 23 14 1 1
gi|7295117|gb|AE003556.1| 281146 bp 2 8 0 1
gi|7295064|gb|AE003555.1| 281936 bp 9 14 0 0
gi|7295028|gb|AE003554.1| 285729 bp 13 10 0 0
gi|7294982|gb|AE003553.1| 287145 bp 19 4 0 0
gi|7294927|gb|AE003552.1| 286784 bp 10 6 1 0
gi|7294877|gb|AE003551.1| 285978 bp 5 8 0 0
gi|7294844|gb|AE003550.1| 298675 bp 5 11 1 1
gi|7294827|gb|AE003549.1| 300477 bp 13 10 0 0
gi|7294819|gb|AE003548.1| 244249 bp 30 15 0 0
gi|7294792|gb|AE003547.1| 281396 bp 10 14 0 0
gi|7294749|gb|AE003546.1| 281602 bp 14 5 0 0
gi|7294729|gb|AE003545.1| 281893 bp 22 15 1 3
gi|7294680|gb|AE003544.1| 281869 bp 7 5 0 0
gi|7294631|gb|AE003543.1| 284386 bp 9 4 0 1
gi|7294592|gb|AE003542.1| 289887 bp 8 10 0 0
gi|7294556|gb|AE003541.1| 265547 bp 8 6 0 2
gi|7294528|gb|AE003540.1| 297385 bp 9 15 2 0
gi|7294496|gb|AE003539.1| 271729 bp 9 10 0 1
gi|7294470|gb|AE003538.1| 303715 bp 8 8 0 0
gi|7294453|gb|AE003537.1| 280570 bp 6 7 0 0
gi|7294412|gb|AE003536.1| 341639 bp 11 7 1 0
gi|7294397|gb|AE003535.1| 278748 bp 11 6 0 0
gi|7294375|gb|AE003534.1| 280061 bp 3 8 0 0
gi|7294349|gb|AE003533.1| 275076 bp 7 9 0 0
gi|7294302|gb|AE003532.1| 295377 bp 9 3 0 0
gi|7294291|gb|AE003531.1| 274277 bp 9 4 0 0
gi|7294232|gb|AE003530.1| 279136 bp 10 6 0 0
gi|7294198|gb|AE003529.1| 252224 bp 8 3 0 0
gi|7294145|gb|AE003528.1| 283712 bp 10 9 0 0
gi|7294090|gb|AE003527.1| 279679 bp 10 7 0 0
gi|7294043|gb|AE003526.1| 280887 bp 6 8 0 0
gi|7294009|gb|AE003525.1| 291880 bp 16 6 0 0
gi|7293975|gb|AE003524.1| 335868 bp 7 11 0 0
gi|7293946|gb|AE003523.1| 283337 bp 6 5 0 1
gi|7293918|gb|AE003522.1| 290837 bp 12 5 0 1
gi|7293901|gb|AE003521.1| 271237 bp 11 12 0 1
gi|7293883|gb|AE003520.1| 292222 bp 7 3 1 0
gi|7293842|gb|AE003519.1| 276243 bp 9 6 1 0
gi|7293817|gb|AE003518.1| 280289 bp 11 5 0 0
gi|7293794|gb|AE003517.1| 257672 bp 4 2 1 0
gi|7293747|gb|AE003516.1| 287649 bp 5 3 0 0
gi|7293706|gb|AE003515.1| 273521 bp 1 7 0 0
gi|7293659|gb|AE003514.1| 274668 bp 3 4 1 1
gi|7289390|gb|AE003204.1| 14074 bp 0 0 0 0
gi|7289766|gb|AE003242.1| 20950 bp 0 0 0 0
gi|7288950|gb|AE002969.1| 19560 bp 0 0 0 0
gi|7289605|gb|AE002867.1| 1179 bp 0 0 0 0
gi|7289134|gb|AE003115.1| 3101 bp 0 0 0 0
gi|7316094|gb|AE002647.1| 0 bp 0 0 0 0
gi|7296579|gb|AE003599.1| 242396 bp 1 4 1 1
gi|7296549|gb|AE003598.1| 303162 bp 6 3 0 0
gi|7296525|gb|AE003597.1| 295566 bp 2 3 0 2
gi|7296506|gb|AE003596.1| 318817 bp 3 1 0 0
gi|7296463|gb|AE003595.1| 294257 bp 3 2 0 1
gi|7296405|gb|AE003594.1| 305516 bp 5 3 0 0
gi|7296371|gb|AE003593.1| 313115 bp 7 5 1 1
gi|7296338|gb|AE003592.1| 322667 bp 8 6 0 0
gi|7296281|gb|AE003591.1| 297877 bp 8 13 0 1
gi|7289763|gb|AE002698.1| 3074 bp 2 0 0 0
gi|7289744|gb|AE002786.1| 46468 bp 0 1 0 0
gi|7289859|gb|AE002656.1| 192318 bp 2 0 0 0
gi|7289180|gb|AE002893.1| 12718 bp 0 0 0 0
gi|7289879|gb|AE002612.1| 62039 bp 0 4 0 0
gi|7288924|gb|AE002622.1| 19569 bp 0 0 0 0
gi|7288927|gb|AE002700.1| 27887 bp 1 1 0 0
gi|7289063|gb|AE002771.1| 12661 bp 1 0 0 0
gi|7289072|gb|AE002945.1| 24781 bp 0 0 0 0
gi|7289452|gb|AE002985.1| 14450 bp 0 0 0 0
gi|7289817|gb|AE003107.1| 3855 bp 0 1 0 0
gi|7289498|gb|AE003116.1| 47681 bp 0 5 0 0
gi|7289428|gb|AE003123.1| 1928 bp 0 0 0 0
gi|7289557|gb|AE003131.1| 18252 bp 0 0 0 0
gi|7289011|gb|AE003041.1| 20379 bp 0 0 0 0
gi|7289447|gb|AE002665.1| 111329 bp 2 3 0 0
gi|7289124|gb|AE002673.1| 11578 bp 0 0 0 0
gi|7288933|gb|AE002585.1| 3866 bp 0 0 0 0
gi|7288940|gb|AE002772.1| 17099 bp 0 1 1 0
gi|7289795|gb|AE003009.1| 5331 bp 0 0 0 0
gi|7289101|gb|AE003147.1| 12069 bp 0 0 0 0
gi|7288946|gb|AE003235.1| 15690 bp 0 0 0 0
gi|7289104|gb|AE003139.1| 53962 bp 0 0 0 0
----------------------------------------------------------------------------------------
Total 23674253 bp 691 591 20 28
----------------------------------------------------------------------------------------
Repeats >= 40 bp Total> 8 6 2 0 0
----------------------------------------------------------------------------------------
© Division of Biochemical Sciences, National Chemical Laboratory, Pune 411008, INDIA