Tetra-Nucleotide Repeats in Genomic Sequences
Tetra-Nucleotide Repeats in
Drosophila melanogaster Chromosome-Arm-2R Genomic Scaffolds
Genomic sequence...
gi|7289019|gb|AE002937.1|AE002937 Drosophila melanogaster genomic scaffold 142000013385320, complete sequence
Position Repeat Coverage Repeat
2022 TTTA * 6 22/24 TTTA CTTA TTCA TTTA TTTA TTTA
-----------------------------------------------------------------------------
Total sequence length......................... 3612
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 1
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
TTTA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7289079|gb|AE003017.1|AE003017 Drosophila melanogaster genomic scaffold 142000013385367, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 19141
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7289475|gb|AE003048.1|AE003048 Drosophila melanogaster genomic scaffold 142000013385699, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 29176
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7289453|gb|AE003279.1|AE003279 Drosophila melanogaster genomic scaffold 142000013385680, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 7951
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7289112|gb|AE003322.1|AE003322 Drosophila melanogaster genomic scaffold 142000013385396, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 43718
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7289300|gb|AE002594.1|AE002594 Drosophila melanogaster genomic scaffold 142000013385553, complete sequence
Position Repeat Coverage Repeat
10955 AAAT * 5 18/20 AAAT AAAT AAAT AAGT AAAC
-----------------------------------------------------------------------------
Total sequence length......................... 11918
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 1
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7289520|gb|AE002621.1|AE002621 Drosophila melanogaster genomic scaffold 142000013385737, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 2655
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7289039|gb|AE002630.1|AE002630 Drosophila melanogaster genomic scaffold 142000013385333, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 12312
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7288934|gb|AE002639.1|AE002639 Drosophila melanogaster genomic scaffold 142000013385246, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 13170
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7289090|gb|AE002666.1|AE002666 Drosophila melanogaster genomic scaffold 142000013385377, complete sequence
Position Repeat Coverage Repeat
10780 AATA * 5 18/20 AATA CATA AACA AATA AATA
-----------------------------------------------------------------------------
Total sequence length......................... 24153
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 1
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AATA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7288943|gb|AE002691.1|AE002691 Drosophila melanogaster genomic scaffold 142000013385255, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 32417
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7288917|gb|AE002726.1|AE002726 Drosophila melanogaster genomic scaffold 142000013385230, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 1893
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7289853|gb|AE002751.1|AE002751 Drosophila melanogaster genomic scaffold 142000013386031, complete sequence
Position Repeat Coverage Repeat
23959 ATAC * 6 22/24 ATAC ATAT ATAC ATAC ACAC ATAC
50931 ATTA * 9 33/36 ATTA ATTA ATTA ATGA ATTA ATGA ATTA ATTA ATTT
-----------------------------------------------------------------------------
Total sequence length......................... 107231
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 2
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATAC-1 ATTA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7289862|gb|AE002760.1|AE002760 Drosophila melanogaster genomic scaffold 142000013386034, complete sequence
Position Repeat Coverage Repeat
51650 ATTC * 5 18/20 ATTC ATTC ATTC ATTC AGTT
-----------------------------------------------------------------------------
Total sequence length......................... 62674
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 1
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATTC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7289517|gb|AE002761.1|AE002761 Drosophila melanogaster genomic scaffold 142000013385734, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 4416
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7289299|gb|AE002770.1|AE002770 Drosophila melanogaster genomic scaffold 142000013385552, complete sequence
Position Repeat Coverage Repeat
29023 TTTA * 5 19/20 TTTA TTTA TTTA TTTA TTTT
-----------------------------------------------------------------------------
Total sequence length......................... 32269
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 1
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
TTTA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7289417|gb|AE002806.1|AE002806 Drosophila melanogaster genomic scaffold 142000013385651, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 3603
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7289767|gb|AE002892.1|AE002892 Drosophila melanogaster genomic scaffold 142000013385959, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 16864
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7288929|gb|AE002919.1|AE002919 Drosophila melanogaster genomic scaffold 142000013385241, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 3000
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7289383|gb|AE002935.1|AE002935 Drosophila melanogaster genomic scaffold 142000013385620, complete sequence
Position Repeat Coverage Repeat
5332 TTAT * 5 18/20 TTAT TTAT TTAT TTAA TTTT
-----------------------------------------------------------------------------
Total sequence length......................... 21261
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 1
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
TTAT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7288949|gb|AE002944.1|AE002944 Drosophila melanogaster genomic scaffold 142000013385261, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 1824
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7288953|gb|AE002952.1|AE002952 Drosophila melanogaster genomic scaffold 142000013385263, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 14708
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7289359|gb|AE002960.1|AE002960 Drosophila melanogaster genomic scaffold 142000013385601, complete sequence
Position Repeat Coverage Repeat
10563 ACAG * 5 18/20 ACAG ACAG ACAG ACGG ACGG
-----------------------------------------------------------------------------
Total sequence length......................... 19947
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 1
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ACAG-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7289183|gb|AE002968.1|AE002968 Drosophila melanogaster genomic scaffold 142000013385462, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 3372
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7289437|gb|AE002976.1|AE002976 Drosophila melanogaster genomic scaffold 142000013385668, complete sequence
Position Repeat Coverage Repeat
14894 TGTC * 5 18/20 TGTC TGTC TGTC TGTC CGTA
15515 TATT * 5 18/20 TATT TTTT CATT TATT TATT
24406 TTAA * 5 18/20 TTAA TAAA TAAA TTAA TTAA
-----------------------------------------------------------------------------
Total sequence length......................... 43487
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 3
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
TATT-1 TTAA-1 TGTC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7289322|gb|AE002980.1|AE002980 Drosophila melanogaster genomic scaffold 142000013385568, complete sequence
Position Repeat Coverage Repeat
1073 TTAT * 5 18/20 TTAT TTAT TTAT TTTT TTTT
19471 AAAT * 5 18/20 AAAT AAAT AAAA AAAT AATT
-----------------------------------------------------------------------------
Total sequence length......................... 19750
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 2
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 TTAT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7289200|gb|AE002984.1|AE002984 Drosophila melanogaster genomic scaffold 142000013385479, complete sequence
Position Repeat Coverage Repeat
17691 ATTT * 5 18/20 ATTT ATTT ATTT TTTT TTTT
-----------------------------------------------------------------------------
Total sequence length......................... 26448
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 1
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATTT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7289372|gb|AE002992.1|AE002992 Drosophila melanogaster genomic scaffold 142000013385609, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 13643
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7289348|gb|AE003000.1|AE003000 Drosophila melanogaster genomic scaffold 142000013385592, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 17194
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7289338|gb|AE003008.1|AE003008 Drosophila melanogaster genomic scaffold 142000013385583, complete sequence
Position Repeat Coverage Repeat
16752 ATAG * 5 18/20 ATAG ATAT ATAG ATAC ATAG
24084 ATGC * 5 18/20 ATGC ACGC ATGC ATGC ATGA
-----------------------------------------------------------------------------
Total sequence length......................... 26058
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 2
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATAG-1 ATGC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7289553|gb|AE003016.1|AE003016 Drosophila melanogaster genomic scaffold 142000013385767, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 1073
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7288979|gb|AE003024.1|AE003024 Drosophila melanogaster genomic scaffold 142000013385289, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 59055
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7289342|gb|AE003032.1|AE003032 Drosophila melanogaster genomic scaffold 142000013385587, complete sequence
Position Repeat Coverage Repeat
9280 ATAA * 5 19/20 ATAA ATAA ATAA ATTA ATAA
11889 TATT * 5 18/20 TATT TATT TATT AAGT TATT
12228 ACGG * 5 18/20 ACGG ACGG ACAG ATGG ACGG
17978 CTTT * 5 18/20 CTTT ATTT CTTT CTTT ATTT
-----------------------------------------------------------------------------
Total sequence length......................... 29994
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 4
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATAA-1 ACGG-1 TATT-1 CTTT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7289208|gb|AE003035.1|AE003035 Drosophila melanogaster genomic scaffold 142000013385487, complete sequence
Position Repeat Coverage Repeat
532 GTCC * 5 18/20 GTCC ATCT GTCC GTCC GTCC
-----------------------------------------------------------------------------
Total sequence length......................... 1546
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 1
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
GTCC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7289130|gb|AE003040.1|AE003040 Drosophila melanogaster genomic scaffold 142000013385414, complete sequence
Position Repeat Coverage Repeat
43629 TTAT * 6 22/24 TTAT TTAT TTAT TTAA TTAT TTAA
-----------------------------------------------------------------------------
Total sequence length......................... 55603
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 1
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
TTAT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7289411|gb|AE002589.1|AE002589 Drosophila melanogaster genomic scaffold 142000013385645, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 1058
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7289416|gb|AE002607.1|AE002607 Drosophila melanogaster genomic scaffold 142000013385650, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 1239
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7289156|gb|AE002648.1|AE002648 Drosophila melanogaster genomic scaffold 142000013385436, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 4403
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7289408|gb|AE002686.1|AE002686 Drosophila melanogaster genomic scaffold 142000013385643, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 1527
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7289468|gb|AE003001.1|AE003001 Drosophila melanogaster genomic scaffold 142000013385692, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 1019
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7289446|gb|AE003056.1|AE003056 Drosophila melanogaster genomic scaffold 142000013385676, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 22669
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7289145|gb|AE003064.1|AE003064 Drosophila melanogaster genomic scaffold 142000013385425, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 22016
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7289388|gb|AE003195.1|AE003195 Drosophila melanogaster genomic scaffold 142000013385624, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 1511
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7289263|gb|AE002709.1|AE002709 Drosophila melanogaster genomic scaffold 142000013385535, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 40796
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7289785|gb|AE003073.1|AE003073 Drosophila melanogaster genomic scaffold 142000013385973, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 3738
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7289275|gb|AE002640.1|AE002640 Drosophila melanogaster genomic scaffold 142000013385546, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 2000
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7289053|gb|AE002788.1|AE002788 Drosophila melanogaster genomic scaffold 142000013385347, complete sequence
Position Repeat Coverage Repeat
2736 TATT * 5 18/20 TATT TATG TATT TATT TGTT
-----------------------------------------------------------------------------
Total sequence length......................... 19182
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 1
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
TATT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7289057|gb|AE003081.1|AE003081 Drosophila melanogaster genomic scaffold 142000013385349, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 12708
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7289223|gb|AE003090.1|AE003090 Drosophila melanogaster genomic scaffold 142000013385502, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 38153
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7316105|gb|AE002769.1|AE002769 Drosophila melanogaster genomic scaffold 142000013386052, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 0
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7302256|gb|AE003788.1|AE003788 Drosophila melanogaster genomic scaffold 142000013386052 section 5 of 5, complete sequence
Position Repeat Coverage Repeat
55507 AAGA * 5 19/20 AAGA AAGA AAGA AAGA AATA
75208 ATTT * 5 18/20 ATTT ATTT ATTT ATTT ATAG
108680 AAAT * 5 18/20 AAAT AAGT ACAT AAAT AAAT
-----------------------------------------------------------------------------
Total sequence length......................... 128817
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 3
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 AAGA-1 ATTT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7302239|gb|AE003787.1|AE003787 Drosophila melanogaster genomic scaffold 142000013386052 section 4 of 5, complete sequence
Position Repeat Coverage Repeat
26631 TTTA * 5 18/20 TTTA TTTA TTTA TTTT TTTT
33449 TTAA * 5 18/20 TTAA TAAA TAAA TTAA TTAA
73968 ACGG * 5 18/20 ACGG ACGG ACAG ACAG ACGG
77468 CCGT * 5 18/20 CCGT CTGT CTGT CCGT CCGT
166179 GTCT * 5 18/20 GTCT GTCC ATCT GTCT GTCT
201236 ACAA * 5 18/20 ACAA ACAA ACAA ACAG AAAA
265183 ATGT * 5 18/20 ATGT ATGT ATGT ATGT TTTT
-----------------------------------------------------------------------------
Total sequence length......................... 307228
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 7
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATGT-1 ACAA-1 ACGG-1 TTAA-1 TTTA-1 GTCT-1 CCGT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7302231|gb|AE003786.1|AE003786 Drosophila melanogaster genomic scaffold 142000013386052 section 3 of 5, complete sequence
Position Repeat Coverage Repeat
176644 GTCT * 6 22/24 GTCT TTCT GTCT GTCC GTCT GTCT
200381 ATTA * 6 23/24 ATTA ATTA ATTA ATTA ATTA ATTT
203597 TGTA * 5 18/20 TGTA TATA CGTA TGTA TGTA
246116 AATG * 5 18/20 AATG AATG AATG AATT AATT
264686 TATT * 5 18/20 TATT TATT TATG TTTT TATT
-----------------------------------------------------------------------------
Total sequence length......................... 316735
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 5
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AATG-1 ATTA-1 TATT-1 TGTA-1 GTCT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7302205|gb|AE003785.1|AE003785 Drosophila melanogaster genomic scaffold 142000013386052 section 2 of 5, complete sequence
Position Repeat Coverage Repeat
28548 CATT * 6 22/24 CATT CAAG CATT CATT CATT CATT
32669 CTGG * 7 27/28 CTGG CCGG CTGG CTGG CTGG CTGG CTGG
46676 TCCG * 6 22/24 TCCG TCCG TGCT TCCG TCCG TCCG
58210 TATT * 6 22/24 TATT TATT TATT TATT TATT AATA
79321 ATTA * 5 18/20 ATTA ATTA ATTA ATTA AAGA
80826 TAAA * 5 18/20 TAAA TAAA AAAG TAAA TAAA
84699 TTGT * 6 22/24 TTGT TTCT TTTT TTGT TTGT TTGT
92319 TATC * 10 38/40 TATC TATC TATA TATC TATC TATC TATC TATC TATC TATA
138869 ATCT * 5 18/20 ATCT ATCT ATCA ATTT ATCT
141741 AATA * 5 18/20 AATA AATA AATA AATA ATAA
141787 TATT * 6 22/24 TATT TTTT TATT TACT TATT TATT
143344 ACAT * 5 18/20 ACAT ATGT ACAT ACAT ACAT
163573 CCGT * 5 19/20 CCGT CTGT CCGT CCGT CCGT
171807 AATA * 5 18/20 AATA AATA AATT AATA AATT
174460 ATCA * 5 18/20 ATCA ATCA ATCA ATCA ATTG
194934 CATA * 5 18/20 CATA CATA CATA TGTA CATA
199833 AATC * 5 19/20 AATC AATC AATA AATC AATC
211953 TCTG * 5 18/20 TCTG TCCG TCCG TCTG TCTG
231292 TGTA * 5 19/20 TGTA TGTA TGTA TGTA TGCA
253628 TCCG * 10 36/40 TCCG TCCG TCCG TCCG TCCG TCCG CCCG CCCG GCCG TCAG
262637 CTGG * 6 22/24 CTGG CTGG CTGA CTGG CTGA CTGG
278883 ATAC * 5 18/20 ATAC AAAC ATAC ATAC ATAG
-----------------------------------------------------------------------------
Total sequence length......................... 296279
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 22
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AATA-2 AATC-1 ATAC-1 ATTA-1 ATCA-1 ATCT-1 ACAT-1 TAAA-1
TATT-2 TATC-1 TTGT-1 TGTA-1 TCTG-1 TCCG-2 CATA-1 CATT-1
CTGG-2 CCGT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7302167|gb|AE003784.1|AE003784 Drosophila melanogaster genomic scaffold 142000013386052 section 1 of 5, complete sequence
Position Repeat Coverage Repeat
84392 TATG * 8 31/32 TATG TATG TATA TATG TATG TATG TATG TATG
98935 TGTA * 6 22/24 TGTA TGTA AATA TGTA TGTA TGTA
99330 ACAT * 5 19/20 ACAT ACAT ACAT ACAT ATAT
106540 TATG * 5 18/20 TATG TATG TATT TATA TATG
108770 ATAC * 6 22/24 ATAC ATAA ATAC ATAC ATAC ATAT
111049 TACA * 6 22/24 TACA TGCA TACA TGCA TACA TACA
112012 GTCA * 5 18/20 GTCA GACA GTCA GACA GTCA
117521 TGTA * 5 18/20 TGTA TGTA CATA TGTA TGTA
140212 CTTT * 5 18/20 CTTT CTGT CTTT CTCT CTTT
154640 CATA * 5 18/20 CATA CATA TAAA CATA CATA
188501 TACA * 5 18/20 TACA TACA TATA TATA TACA
305909 AATA * 5 19/20 AATA AATA AATA AATA AAAA
-----------------------------------------------------------------------------
Total sequence length......................... 313072
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 12
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AATA-1 ATAC-1 ACAT-1 TATG-2 TACA-2 TGTA-2 GTCA-1 CATA-1
CTTT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7289017|gb|AE003098.1|AE003098 Drosophila melanogaster genomic scaffold 142000013385318, complete sequence
Position Repeat Coverage Repeat
651 TATT * 5 18/20 TATT TATT TATT TGTA TATT
-----------------------------------------------------------------------------
Total sequence length......................... 24781
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 1
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
TATT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7316098|gb|AE002778.1|AE002778 Drosophila melanogaster genomic scaffold 142000013386042, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 0
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7302304|gb|AE003790.1|AE003790 Drosophila melanogaster genomic scaffold 142000013386042 section 2 of 2, complete sequence
Position Repeat Coverage Repeat
9161 TAAA * 5 18/20 TAAA TAAA TAAA TATA AAAA
30549 TCCA * 6 22/24 TCCA TCCA TGCA TCCA TCCA TCAA
46332 AACG * 5 19/20 AACG AACG AACA AACG AACG
58306 TTGT * 5 18/20 TTGT TTGT TTGT TTGT TGCT
111995 TACA * 5 18/20 TACA TACA TACA TATG TACA
122929 CACT * 5 18/20 CACT CACT CACT CACT TAGT
149953 TTTA * 5 18/20 TTTA TTTA TTTA TTTT TTTT
189252 CCAT * 9 33/36 CCAT CCAT CCAG CCAT CAAT CCAT CCAT CCAT ACAT
-----------------------------------------------------------------------------
Total sequence length......................... 210451
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 8
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AACG-1 TAAA-1 TACA-1 TTTA-1 TTGT-1 TCCA-1 CACT-1 CCAT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7302263|gb|AE003789.1|AE003789 Drosophila melanogaster genomic scaffold 142000013386042 section 1 of 2, complete sequence
Position Repeat Coverage Repeat
40261 TAAT * 6 23/24 TAAT TAAT TAAT TAAT TAAT TTAT
58872 CCAT * 8 29/32 CCAT CCAT CCAT CCAT CCAT CCAT CCGT CCGA
62818 TCAT * 6 22/24 TCAT TCAT TCAT TCAC TCAC TCAT
64199 TGAG * 5 18/20 TGAG TGAG TTAG TGAC TGAG
72371 TGTC * 5 19/20 TGTC TGTC TGTC TGTC TGCC
104911 GAGT * 5 18/20 GAGT GAGT GAAT GAGT GACT
191214 TATT * 5 18/20 TATT TATT TATT GGTT TATT
235000 ACAT * 5 18/20 ACAT ACAT ACAT ATGT ACAT
257760 GTGA * 5 19/20 GTGA GTGA GTCA GTGA GTGA
-----------------------------------------------------------------------------
Total sequence length......................... 298904
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 9
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ACAT-1 TAAT-1 TATT-1 TGAG-1 TGTC-1 TCAT-1 GAGT-1 GTGA-1
CCAT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7316102|gb|AE002787.1|AE002787 Drosophila melanogaster genomic scaffold 142000013386047, complete sequence
Position Repeat Coverage Repeat
-----------------------------------------------------------------------------
Total sequence length......................... 0
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 0
-----------------------------------------------------------------------------
Genomic sequence...
gi|7304243|gb|AE003842.1|AE003842 Drosophila melanogaster genomic scaffold 142000013386047 section 52 of 52, complete sequence
Position Repeat Coverage Repeat
95 TATG * 6 22/24 TATG TATG TATG TACA TATG TATG
59060 ATCT * 6 22/24 ATCT AACT ATCT ATCT ATCT ACCT
65104 AGTT * 6 23/24 AGTT AGTT AGTT AGTT AGTC AGTT
79626 GACG * 5 18/20 GACG GACA GACG GACG GACA
79651 ACGG * 5 18/20 ACGG ACGG ATGG ACGG ATGG
82960 CTCG * 5 18/20 CTCG CTCT CTCG CTCT CTCG
89973 GTAT * 5 18/20 GTAT ATAT GTAT GTAT GTAG
106776 AAAG * 5 18/20 AAAG AAAG AAAG AAAG GAAC
108854 AAAT * 5 18/20 AAAT AAAT AAAT AAAT ACAC
120362 ATGT * 6 23/24 ATGT ATGT ATGT ATGT ATGT ATGC
158332 GTCT * 5 18/20 GTCT GTCT GACT GTCT GTCC
205340 ACGG * 5 18/20 ACGG ACGG ACAA ACGG ACGG
207322 GACA * 5 18/20 GACA GAAA GACA GACG GACA
230556 TTTA * 5 19/20 TTTA TTTA TTTA TTTA TGTA
234039 GTCC * 5 18/20 GTCC GTCC GTCT GTCC GTCG
247829 GTGA * 5 18/20 GTGA GTGA GTGA GTGA GGAA
-----------------------------------------------------------------------------
Total sequence length......................... 252413
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 16
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 AAAG-1 ATGT-1 ATCT-1 AGTT-1 ACGG-2 TATG-1 TTTA-1
GACA-1 GACG-1 GTAT-1 GTGA-1 GTCT-1 GTCC-1 CTCG-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7304203|gb|AE003841.1|AE003841 Drosophila melanogaster genomic scaffold 142000013386047 section 51 of 52, complete sequence
Position Repeat Coverage Repeat
34146 AAAC * 5 18/20 AAAC AAAG AAAC AAAC AAAA
34467 CCAT * 6 23/24 CCAT CCAT CCAT CCAT CCAT CCAC
36851 CATA * 6 23/24 CATA CATA CATA CATA CATA AATA
37153 TACA * 5 18/20 TACA TACA TACA TACA TAGT
45034 TACT * 5 18/20 TACT TACT TACT TACT TGAT
81759 AAAT * 5 19/20 AAAT AAAT AAAT AAAT AAAA
85681 AAAC * 5 18/20 AAAC AAAC AAAC AAAC AAGA
138255 GACA * 5 18/20 GACA AACA GACA GACA GAAA
150027 CATT * 5 18/20 CATT CCAT CATT CATT CATT
206504 AATC * 5 18/20 AATC AATC CATC AATC AATA
207943 GGAT * 5 18/20 GGAT GGAT CGAT CGAT GGAT
210325 CGTC * 5 18/20 CGTC CGTC CTTC CGTC TGTC
233814 TATG * 5 19/20 TATG TATG TATG TATG TATT
-----------------------------------------------------------------------------
Total sequence length......................... 262082
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 13
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 AAAC-2 AATC-1 TATG-1 TACA-1 TACT-1 GACA-1 GGAT-1
CATA-1 CATT-1 CGTC-1 CCAT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7304160|gb|AE003840.1|AE003840 Drosophila melanogaster genomic scaffold 142000013386047 section 50 of 52, complete sequence
Position Repeat Coverage Repeat
143 TGTA * 5 18/20 TGTA GATA TGTA TGTA TGTA
4170 TATG * 6 22/24 TATG TATG TATG TATA TATG TATA
22919 ACCG * 6 22/24 ACCG ACCG ACCG ACCG ACCT GCCG
32740 GATA * 5 18/20 GATA CACA GATA GATA GATA
38603 TACA * 5 18/20 TACA TATG TACA TACA TACA
39027 AAAT * 6 23/24 AAAT AAAT AAAT AAAT AAAT AAAA
63025 ATAC * 5 18/20 ATAC ATAC ATAC ATAT ACAC
83876 TAAA * 5 18/20 TAAA TAAA ATAA TAAA TAAA
87372 ATAC * 5 18/20 ATAC ATAC ATAC ATAT ATAT
100830 ACAT * 11 41/44 ACAT ACAT ACAT ACAT ACAT ACAT ACAT ACAT ACAT ATAT GCTT
143869 GGAC * 6 22/24 GGAC GGAC GGAC GGAC GGAC AGAA
144731 CTCA * 5 19/20 CTCA CTCA CTCA CACA CTCA
152915 CCGA * 7 27/28 CCGA CCGA CCGA CCGA CCGA CCGA CCGT
154042 CTGA * 5 18/20 CTGA GTGA CTGA CTAA CTGA
155668 TGGA * 5 18/20 TGGA TAGA TGGA TAGA TGGA
156738 TACA * 5 18/20 TACA TATA TACA TACA TATA
190090 CTAT * 6 23/24 CTAT CTAT CTAT CTAT CTAT CAAT
226159 GTCA * 5 18/20 GTCA CTCA GTTA GTCA GTCA
244615 AAAT * 5 18/20 AAAT GAAT AAAT AAAT AATT
-----------------------------------------------------------------------------
Total sequence length......................... 259764
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 19
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-2 ATAC-2 ACAT-1 ACCG-1 TAAA-1 TATG-1 TACA-2 TGTA-1
TGGA-1 GATA-1 GTCA-1 GGAC-1 CTAT-1 CTGA-1 CTCA-1 CCGA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7304109|gb|AE003839.1|AE003839 Drosophila melanogaster genomic scaffold 142000013386047 section 49 of 52, complete sequence
Position Repeat Coverage Repeat
6004 CCAG * 5 18/20 CCAG CCAT CCAA CCAG CCAG
6939 GATG * 8 30/32 GATG CTTG GATG GATG GATG GATG GATG GATG
16057 GTGA * 7 26/28 GTGA GTGA CTGA GTGA GTGA GTGA GTGG
16446 ATGT * 6 22/24 ATGT ATGT ATGA ATAT ATGT ATGT
34843 ATAC * 5 18/20 ATAC ACAC ATAC ATAC GTAC
43757 CCAT * 5 19/20 CCAT CCAT CCAT CGAT CCAT
80912 AAAT * 5 18/20 AAAT AAAT ACAA AAAT AAAT
84284 TATG * 5 18/20 TATG TATG TATG TATG TACA
152623 GTTG * 5 18/20 GTTG GTTG GTTA GTTG GCTG
181253 CTGT * 5 18/20 CTGT CTGT CTGT CTGC TTGT
187823 ACAG * 5 18/20 ACAG ACAG ACAG ACAG ATGG
251593 TATG * 5 18/20 TATG TATG TATG TACG TTTG
255376 ACTG * 5 18/20 ACTG ACTG ACTG GCTG GCTG
255397 CTGA * 6 23/24 CTGA CTGA CTGA CTGA CTAA CTGA
-----------------------------------------------------------------------------
Total sequence length......................... 261850
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 14
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 ATAC-1 ATGT-1 ACAG-1 ACTG-1 TATG-2 GATG-1 GTTG-1
GTGA-1 CTGA-1 CTGT-1 CCAT-1 CCAG-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7304068|gb|AE003838.1|AE003838 Drosophila melanogaster genomic scaffold 142000013386047 section 48 of 52, complete sequence
Position Repeat Coverage Repeat
54681 TTCA * 6 23/24 TTCA TTCA TTCA TTCA TTGA TTCA
56031 TATT * 5 19/20 TATT TATT TATT TATT TAAT
65922 CAAA * 5 18/20 CAAA CAAA CAAT CAAA CCAA
67840 ACAT * 5 20/20 ACAT ACAT ACAT ACAT ACAT
71729 TTCC * 5 18/20 TTCC TTCC TTCC TACC ATCC
109401 AGGA * 5 19/20 AGGA CGGA AGGA AGGA AGGA
110856 AGAT * 7 28/28 AGAT AGAT AGAT AGAT AGAT AGAT AGAT
132549 CAGA * 6 22/24 CAGA CAGA CAGA CAGA CAGA CAAT
161459 TACA * 5 18/20 TACA TACA TACA TACG TATA
162833 TGTT * 5 20/20 TGTT TGTT TGTT TGTT TGTT
169793 TCAA * 6 22/24 TCAA TCAA TCAA TCGA TCAA TCGA
202355 CTTC * 5 19/20 CTTC CTTC CTTC CTTC CTTA
214907 GCTG * 5 18/20 GCTG ACTG CCTG GCTG GCTG
232191 ATCT * 5 19/20 ATCT ATCG ATCT ATCT ATCT
257592 CTGG * 5 18/20 CTGG CTAG CTGG ATGG CTGG
262140 TCCA * 10 36/40 TCCA TCCC TCCA TCAA TCCA TCCA TCCA TACA TCCA CCCA
263193 CAGT * 5 18/20 CAGT CAAT CAGT CAAT CAGT
-----------------------------------------------------------------------------
Total sequence length......................... 263411
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 17
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATCT-1 AGAT-1 AGGA-1 ACAT-1 TATT-1 TACA-1 TTCA-1 TTCC-1
TGTT-1 TCAA-1 TCCA-1 GCTG-1 CAAA-1 CAGA-1 CAGT-1 CTTC-1
CTGG-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7304040|gb|AE003837.1|AE003837 Drosophila melanogaster genomic scaffold 142000013386047 section 47 of 52, complete sequence
Position Repeat Coverage Repeat
24529 TAAA * 5 18/20 TAAA TAAA TAGA TAAA AAAA
48024 CAAC * 5 18/20 CAAC CACC CAAC CACC CAAC
97950 ATAC * 5 18/20 ATAC ATAC ATAC ATAC ATCG
110876 TTTG * 5 18/20 TTTG TTTG GTTG TTTG TCTG
126136 TTTA * 5 18/20 TTTA TTTA TTTA TTTA TTAT
165375 CCCA * 5 18/20 CCCA ACCA CCCA ACCA CCCA
167229 CCAC * 5 18/20 CCAC CCAC CCAC ACAC ACAC
200093 AGTA * 5 19/20 AGTA AGTA AGTT AGTA AGTA
233442 TTTA * 5 18/20 TTTA TTTT TTTT TTTA TTTA
-----------------------------------------------------------------------------
Total sequence length......................... 234905
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 9
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATAC-1 AGTA-1 TAAA-1 TTTA-2 TTTG-1 CAAC-1 CCAC-1 CCCA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7304001|gb|AE003836.1|AE003836 Drosophila melanogaster genomic scaffold 142000013386047 section 46 of 52, complete sequence
Position Repeat Coverage Repeat
5688 AACC * 5 18/20 AACC ACCC AACC ATCC AACC
22859 GTCT * 5 18/20 GTCT GTCT GTCT GTGT GTGT
55162 GATC * 6 23/24 GATC GGTC GATC GATC GATC GATC
55823 TGGC * 8 29/32 TGGC TTGC TGGC TGGC TGAC TGGC TGGC TGTC
90392 TCCG * 5 18/20 TCCG TCCA TCAG TCCG TCCG
125978 ATGT * 5 18/20 ATGT ATGT ACAT ATGT ATGT
131788 CATA * 5 18/20 CATA CACA TATA CATA CATA
140403 GTCC * 5 18/20 GTCC GTCC GCCA GTCC GTCC
156351 GACA * 5 18/20 GACA GACC GACA TACA GACA
192075 TGGC * 5 18/20 TGGC TGGC TGGC TGGT TGGT
193203 CGAT * 5 19/20 CGAT CGAT CGAT CGAT CTAT
194147 ATAC * 5 18/20 ATAC ATAC ATAC ATAT ATGC
-----------------------------------------------------------------------------
Total sequence length......................... 253189
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 12
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AACC-1 ATAC-1 ATGT-1 TGGC-2 TCCG-1 GATC-1 GACA-1 GTCT-1
GTCC-1 CATA-1 CGAT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7303956|gb|AE003835.1|AE003835 Drosophila melanogaster genomic scaffold 142000013386047 section 45 of 52, complete sequence
Position Repeat Coverage Repeat
7832 CCAT * 5 18/20 CCAT CCAT CCAT CTAT CTAT
7852 CTAT * 5 18/20 CTAT GTAT CTAT CTAT CTTT
19299 CATC * 7 27/28 CATC CATC CGTC CATC CATC CATC CATC
22198 TGAT * 5 18/20 TGAT TGAT TGAT CGAT TTAT
66689 AAAT * 5 18/20 AAAT AAAT AACT AAAT AAAA
101278 ATCG * 5 18/20 ATCG CTCG ATAG ATCG ATCG
221329 AAAT * 5 18/20 AAAT AAAA CAAT AAAT AAAT
226208 TTAT * 5 18/20 TTAT TTAT TTAC TTAT TTGT
231532 CCGT * 5 18/20 CCGT CCGT CCAT TCGT CCGT
-----------------------------------------------------------------------------
Total sequence length......................... 259860
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 9
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-2 ATCG-1 TTAT-1 TGAT-1 CATC-1 CTAT-1 CCAT-1 CCGT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7303908|gb|AE003834.1|AE003834 Drosophila melanogaster genomic scaffold 142000013386047 section 44 of 52, complete sequence
Position Repeat Coverage Repeat
13499 GTAT * 5 18/20 GTAT ATAT GTAT ATAT GTAT
16367 CCAG * 6 22/24 CCAG CCAG CCAG CCAG CCAG CCGA
84057 ACTC * 5 18/20 ACTC ACTC ACAC ACTC ACTG
110427 ACAT * 6 22/24 ACAT ACAT ACAT ACAT ACAA ATAT
131062 CATA * 5 20/20 CATA CATA CATA CATA CATA
178410 GACC * 8 29/32 GACC GACC GACC GACC GACC GACC GACC AGCT
214209 AATA * 5 18/20 AATA AATA AATT AATA ATTA
245141 TATC * 5 18/20 TATC AATC TATC TATC TATT
247760 TGGT * 5 18/20 TGGT TGGT TGGC TGGT TGGC
247780 TGGC * 9 34/36 TGGC TGGC TGGC TGGC TGGC TGGC TGGC TAGC TGAC
-----------------------------------------------------------------------------
Total sequence length......................... 257324
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 10
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AATA-1 ACAT-1 ACTC-1 TATC-1 TGGT-1 TGGC-1 GACC-1 GTAT-1
CATA-1 CCAG-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7303875|gb|AE003833.1|AE003833 Drosophila melanogaster genomic scaffold 142000013386047 section 43 of 52, complete sequence
Position Repeat Coverage Repeat
8300 CGTG * 5 18/20 CGTG TGTG CGTG CGTG TGTG
33779 GCGA * 5 18/20 GCGA GCGA GCGA GACA GCGA
40413 TATG * 5 18/20 TATG TACG TATG TATG TCTG
43976 TACA * 5 19/20 TACA TACG TACA TACA TACA
44323 TGTA * 5 18/20 TGTA TATA TGTA TGTA TGTG
54460 TGGT * 6 23/24 TGGT TGGT TGGT TGGT TGGT TGGG
54897 GACT * 8 29/32 GACT GACT GACT GACT GAAT GTCT GACT GATT
56129 TTGA * 5 18/20 TTGA TTGA TTGA TTGC TTGG
64189 TGAC * 5 18/20 TGAC TGAC TGAC TGAC TGGT
64218 TTGG * 5 18/20 TTGG TTGG TTGG TTGG TTTT
79145 TTGA * 5 19/20 TTGA TTGA TTAA TTGA TTGA
85773 AAAT * 5 20/20 AAAT AAAT AAAT AAAT AAAT
85806 CGAT * 5 20/20 CGAT CGAT CGAT CGAT CGAT
87742 TCAG * 7 26/28 TCAG TCAG TCAG TCAG CCAG TCAG GCAG
109893 GATG * 5 18/20 GATG GATA TATG GATG GATG
133568 TATG * 5 19/20 TATG TATG TTTG TATG TATG
145307 TTGC * 5 18/20 TTGC TTGC TTGC TTGC TGGG
164955 TTTA * 5 18/20 TTTA TTTA TTTA TTTT TTTT
165704 GTAC * 5 18/20 GTAC GTAC GTAT GTAC ATAC
192631 TATC * 5 19/20 TATC TATC TATC TAGC TATC
197311 CATC * 5 18/20 CATC CATC CATC CAGC CATT
207768 GGTG * 5 18/20 GGTG GGTT GGTG GGTC GGTG
216992 ATAC * 5 18/20 ATAC GTAC ATAC ATAC ATAT
241217 ACCC * 5 18/20 ACCC ACCC ACCC ACTC ACTC
245035 CAAA * 5 18/20 CAAA CAAA CAAA AAAA CAAT
249076 TGAC * 5 19/20 TGAC TGAC TAAC TGAC TGAC
262075 TAAC * 5 18/20 TAAC TGAC TAAC TGAC TAAC
262392 CAGA * 5 18/20 CAGA CAGT CAGA CAGA CAGG
-----------------------------------------------------------------------------
Total sequence length......................... 265562
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 28
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 ATAC-1 ACCC-1 TAAC-1 TATG-2 TATC-1 TACA-1 TTTA-1
TTGA-2 TTGG-1 TTGC-1 TGAC-2 TGTA-1 TGGT-1 TCAG-1 GATG-1
GACT-1 GTAC-1 GGTG-1 GCGA-1 CAAA-1 CATC-1 CAGA-1 CGAT-1
CGTG-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7303842|gb|AE003832.1|AE003832 Drosophila melanogaster genomic scaffold 142000013386047 section 42 of 52, complete sequence
Position Repeat Coverage Repeat
62519 AGAC * 5 18/20 AGAC AGAC AGAC AGAC AGGA
67950 ACAG * 5 18/20 ACAG AACG ACAG ACAG ACAG
88407 TTTA * 5 18/20 TTTA TTTA TTTA TTTT TTTT
95486 CAAA * 5 18/20 CAAA CAAA CAAA CAAA CACC
97720 CATA * 5 18/20 CATA CATA CATA CATA TGTA
122973 CACT * 5 18/20 CACT CACT CGCT CACT CAGT
137318 ATGT * 5 20/20 ATGT ATGT ATGT ATGT ATGT
189671 TATG * 5 18/20 TATG TATG TATG TACG TGTG
191176 CCAA * 5 19/20 CCAA CCAA CCAA CTAA CCAA
193108 ACCT * 5 19/20 ACCT ACCT ACCT TCCT ACCT
223632 TGTT * 6 23/24 TGTT TGTT TGTT TGTT TGTT TGCT
231198 CCAC * 6 23/24 CCAC CCAC CCAT CCAC CCAC CCAC
237576 ATAA * 5 18/20 ATAA ATAA AGAA ATAT ATAA
-----------------------------------------------------------------------------
Total sequence length......................... 261713
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 13
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATAA-1 ATGT-1 AGAC-1 ACAG-1 ACCT-1 TATG-1 TTTA-1 TGTT-1
CAAA-1 CATA-1 CACT-1 CCAA-1 CCAC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7303794|gb|AE003831.1|AE003831 Drosophila melanogaster genomic scaffold 142000013386047 section 41 of 52, complete sequence
Position Repeat Coverage Repeat
60005 TTAT * 5 18/20 TTAT CTAT TTAT ATAT TTAT
60976 ATTT * 5 18/20 ATTT ATTT ATTT AATA ATTT
62854 TATG * 5 18/20 TATG TATG TATG TACA TATG
97154 TACA * 5 18/20 TACA AACA TACA TACA TACT
106464 CATT * 5 18/20 CATT CATT TATT CACT CATT
112350 CAAC * 6 22/24 CAAC CAAC CAAC AAAA CAAC CAAC
135413 GGAT * 5 18/20 GGAT GAAC GGAT GGAT GGAT
151954 ATGT * 5 18/20 ATGT GTGT ATGT ATGT ATTT
155161 TGGA * 9 33/36 TGGA TGGA TGGA TGGA TGGA TGGA CGGA CGGT TGGA
157211 AATA * 5 18/20 AATA AATA AATA AATA ACAA
163210 TTTA * 5 19/20 TTTA TATA TTTA TTTA TTTA
168996 ATGT * 5 18/20 ATGT ATGT ATGT ATCT ATAT
180722 CCGA * 5 19/20 CCGA CCGA CCGA CCAA CCGA
180745 ACTG * 5 18/20 ACTG ACTG ATTG ACTG GCTG
180765 GCTG * 5 18/20 GCTG GCTG GCTG GCTG ATTG
183595 TCCT * 6 22/24 TCCT TCCT ACCT TCCT GCCT TCCT
231923 TATT * 5 18/20 TATT TATT TATT TGTT GATT
238063 GTAT * 5 18/20 GTAT GTAT GTAC ATAT GTAT
252267 TTGT * 5 19/20 TTGT TTGT TTGT TTGT TTTT
-----------------------------------------------------------------------------
Total sequence length......................... 260916
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 19
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AATA-1 ATTT-1 ATGT-2 ACTG-1 TATT-1 TATG-1 TACA-1 TTAT-1
TTTA-1 TTGT-1 TGGA-1 TCCT-1 GTAT-1 GGAT-1 GCTG-1 CAAC-1
CATT-1 CCGA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7303755|gb|AE003830.1|AE003830 Drosophila melanogaster genomic scaffold 142000013386047 section 40 of 52, complete sequence
Position Repeat Coverage Repeat
30887 AGAC * 6 22/24 AGAC AGAC GGAC AGAC GGAC AGAC
148808 AGTC * 8 29/32 AGTC AGTC AGTC AGTC AGTC AGCC AGTT GGTC
153146 ATGT * 5 18/20 ATGT ATGT ATGT ATGT ACAT
154233 AGTT * 5 18/20 AGTT AGTT ACTA AGTT AGTT
154458 CTCC * 5 18/20 CTCC CTCC CTCC CTCG CTCG
157574 TGTA * 6 22/24 TGTA TGTA TGTA TGTA TGTG TGTG
243930 TTTA * 5 18/20 TTTA TTCA TATA TTTA TTTA
-----------------------------------------------------------------------------
Total sequence length......................... 261895
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 7
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATGT-1 AGAC-1 AGTT-1 AGTC-1 TTTA-1 TGTA-1 CTCC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7303717|gb|AE003829.1|AE003829 Drosophila melanogaster genomic scaffold 142000013386047 section 39 of 52, complete sequence
Position Repeat Coverage Repeat
28401 TATG * 5 20/20 TATG TATG TATG TATG TATG
31246 CAGC * 7 26/28 CAGC CAGC CAGC CAGC CAGC CAGC CAAG
43651 TATG * 5 18/20 TATG TATA TATG TATG TATC
47972 GTCA * 5 18/20 GTCA GTCC GTCA GTCA GTTA
62475 AAGA * 5 18/20 AAGA AAGA ATGA AAGA AAAA
63008 GTGG * 5 18/20 GTGG GTGG TTGG GTGG GTGA
76166 ATGT * 11 40/44 ATGT ATGT ATGT ATGT ATGT ATGT ATGT ATGT TTGC ATGT TTGC
76225 TATG * 6 22/24 TATG AATG TATG TATG CATG TATG
123047 CAAA * 5 18/20 CAAA CAAA CAAA TAAA CTAA
125104 CAGT * 7 27/28 CAGT CAGC CAGT CAGT CAGT CAGT CAGT
127127 CAAA * 5 18/20 CAAA CAAA CAAA AAAA AAAA
128903 AGAA * 5 18/20 AGAA AAAA AGAA AGAA AAAA
130231 TATC * 13 47/52 TATC TATC TAGC TATC TATA TATC TATC TGTC TATC TATC TATC TATC TGCC
154283 TATG * 5 19/20 TATG TATG TATG TATG TAGG
167327 GGTT * 5 19/20 GGTT GGTT TGTT GGTT GGTT
201192 ATAC * 5 18/20 ATAC ATAC AAAC ATAC ATAT
213607 TGTA * 5 19/20 TGTA TGTA TGTG TGTA TGTA
215906 TGTT * 10 37/40 TGTT TGTT TGCT TGTT TGTT TGTT TGTT TGTT TGTT GGTC
226577 GTGA * 6 22/24 GTGA GTGA GTGA GTGA GTGA GGAA
255421 CAAA * 5 19/20 CAAA CAAA CAAA GAAA CAAA
-----------------------------------------------------------------------------
Total sequence length......................... 258492
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 20
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAGA-1 ATAC-1 ATGT-1 AGAA-1 TATG-4 TATC-1 TGTA-1 TGTT-1
GTGA-1 GTGG-1 GTCA-1 GGTT-1 CAAA-3 CAGT-1 CAGC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7303677|gb|AE003828.1|AE003828 Drosophila melanogaster genomic scaffold 142000013386047 section 38 of 52, complete sequence
Position Repeat Coverage Repeat
16435 TATC * 6 22/24 TATC TATC TATC TATC TATT TATT
35230 GAGT * 5 18/20 GAGT GAGT GAGT GAGT AAGA
64195 CAAC * 5 18/20 CAAC CAGC GAAC CAAC CAAC
117793 TTTA * 5 18/20 TTTA TTTA ATTA TATA TTTA
128447 TTTA * 5 18/20 TTTA ATTA TTTA TTTA TTTG
129772 TGAA * 5 19/20 TGAA TGAA TGAA TGAA TAAA
147779 CTGG * 5 18/20 CTGG CTAG CTGA CTGG CTGG
152496 GGTC * 5 18/20 GGTC GGTC GGTT GGTC GGGC
172162 CAGT * 5 18/20 CAGT CATC CAGT CAGT CAGT
178435 TATG * 5 18/20 TATG TACG TATG TATT TATG
217983 TGGC * 5 20/20 TGGC TGGC TGGC TGGC TGGC
234150 ATAC * 6 23/24 ATAC ATAC ACAC ATAC ATAC ATAC
244366 CCAT * 5 19/20 CCAT CCAT CCAT CCAT CCTT
-----------------------------------------------------------------------------
Total sequence length......................... 259920
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 13
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATAC-1 TATG-1 TATC-1 TTTA-2 TGAA-1 TGGC-1 GAGT-1 GGTC-1
CAAC-1 CAGT-1 CTGG-1 CCAT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7303662|gb|AE003827.1|AE003827 Drosophila melanogaster genomic scaffold 142000013386047 section 37 of 52, complete sequence
Position Repeat Coverage Repeat
12235 AAAT * 6 24/24 AAAT AAAT AAAT AAAT AAAT AAAT
31092 TATG * 5 18/20 TATG TACA TATG TATG TATG
61833 TGGC * 13 48/52 TGGC TGAC TGGC TGGC TGGC TGGC TGGC TGGC TGGC TGGC TGGC AGCC TGGT
76735 ATAC * 5 18/20 ATAC ATAC ATAC ATAC AAAA
78489 CATA * 5 18/20 CATA CATA CATA CATA TACA
80680 CAGT * 6 22/24 CAGT CATT CAGT CACT CAGT CAGT
85426 TTTA * 5 18/20 TTTA TTTA TTTA TTTA TGTT
94528 ATTT * 5 19/20 ATTT ATTT ATTT ATTT CTTT
96537 CTGG * 9 34/36 CTGG TTGG CTGG TTGG CTGG CTGG CTGG CTGG CTGG
100261 ACAG * 5 18/20 ACAG AAAG ACAG ACAG ACGG
100567 ATCT * 13 48/52 ATCT ATCC ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT GGCT AGCT ATCT
104198 AGAT * 5 18/20 AGAT AGAT AGAT AGAG AGAG
105445 CATT * 5 18/20 CATT CATT CAGC CATT CATT
108769 GCCA * 5 18/20 GCCA GTCA GCCA GGCA GCCA
114688 GACT * 5 18/20 GACT AACT GACT GGCT GACT
117948 ATAA * 6 23/24 ATAA ATAA ATAA ATAA ATAA ATAG
125401 GTGG * 5 18/20 GTGG TTGG GTGG TTGG GTGG
129800 ACTG * 8 30/32 ACTG ACTA ACTG ACTG ACTG ACTG GCTG ACTG
137690 TGGC * 5 18/20 TGGC TTGC TGAC TGGC TGGC
140110 GGAC * 5 18/20 GGAC GAAC GGAC GGAC GGAT
142784 CAGT * 7 27/28 CAGT CAGT CAGT CAGT CAGT CAGT CACT
145948 GGCA * 7 27/28 GGCA GGCA GGCA GGCA GGCT GGCA GGCA
157249 CTGT * 6 22/24 CTGT CTGT CTGT CTGT CCGT CCGT
161777 ACAT * 5 18/20 ACAT ACAT ACAT ACAT ATAC
166936 AAAC * 6 22/24 AAAC AAAC AAAC AAAC TGAC AAAC
194904 ACAT * 5 18/20 ACAT ATAT ACAT ACAT ATAT
201233 TGGC * 5 18/20 TGGC TGCC TGGC TGCC TGGC
239631 TGTA * 5 18/20 TGTA CGTA TGTA TGTA TGTG
249342 TACA * 5 18/20 TACA TACA TACA TACT TATA
254878 TGGA * 6 22/24 TGGA CGGA TGGA TGGA TGGA AGGA
255107 TTCT * 5 18/20 TTCT TTCA TTCT TTAT TTCT
260306 TACA * 5 18/20 TACA TATA TACA TACA TATA
-----------------------------------------------------------------------------
Total sequence length......................... 261694
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 32
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 AAAC-1 ATAA-1 ATAC-1 ATTT-1 ATCT-1 AGAT-1 ACAT-2
ACAG-1 ACTG-1 TATG-1 TACA-2 TTTA-1 TTCT-1 TGTA-1 TGGA-1
TGGC-3 GACT-1 GTGG-1 GGAC-1 GGCA-1 GCCA-1 CATA-1 CATT-1
CAGT-2 CTGT-1 CTGG-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7303588|gb|AE003826.1|AE003826 Drosophila melanogaster genomic scaffold 142000013386047 section 36 of 52, complete sequence
Position Repeat Coverage Repeat
28640 ATAG * 5 18/20 ATAG ATAG ATAG ATAG ATTA
88014 GTCG * 9 33/36 GTCG GTCG GTCG GTCG GTCG GTCG GTCG GTCG GCGA
102952 TACA * 5 18/20 TACA TACA TACA TGCA TATA
103409 GTAT * 5 18/20 GTAT GTGT GTAT GTTT GTAT
104906 TACA * 5 18/20 TACA GACA TACA TACA TATA
105285 TATG * 6 22/24 TATG TATG CATG TATG TATG TATT
137426 ATGG * 5 19/20 ATGG ATGG ATGG ATGG ATAG
138417 AATG * 5 18/20 AATG AATG AATC AATG AATT
172624 CACT * 5 18/20 CACT CACT CACT CGCT CACG
207570 ATAG * 8 29/32 ATAG TCAG ATAG ATAG ATAG ATAG ATAG CTAG
260092 TAAA * 6 22/24 TAAA TAAA TAAA TATA TAAA AAAA
261184 AAAT * 5 18/20 AAAT AAAT AAAT AAAA AAAA
262872 GTCA * 5 18/20 GTCA GTCT GTCA GTCC GTCA
271815 CATA * 6 22/24 CATA CATA CATA CATA CATA GGTA
288649 CACT * 5 18/20 CACT CACT CACT CACA CACA
-----------------------------------------------------------------------------
Total sequence length......................... 291089
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 15
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 AATG-1 ATAG-2 ATGG-1 TAAA-1 TATG-1 TACA-2 GTAT-1
GTCA-1 GTCG-1 CATA-1 CACT-2
----------------------------------------------------------------------------
Genomic sequence...
gi|7303570|gb|AE003825.1|AE003825 Drosophila melanogaster genomic scaffold 142000013386047 section 35 of 52, complete sequence
Position Repeat Coverage Repeat
25838 TGGA * 5 18/20 TGGA TAGA TGGA TGGA AGGA
42181 CTGA * 5 18/20 CTGA CTGA CTGA CTGA CATA
54566 ACTG * 5 18/20 ACTG ACTG GCTG ACTG GCTG
63811 AAAT * 5 18/20 AAAT AAAT AAAT AAAC AAAG
66947 ACAA * 6 22/24 ACAA ACAA ACAA ACAA ACAG AAAA
89949 TACA * 5 18/20 TACA TACA TACA TACA TATG
99470 TACA * 5 19/20 TACA TACA TATA TACA TACA
108434 GTAT * 5 19/20 GTAT GTAC GTAT GTAT GTAT
110103 TCTT * 5 18/20 TCTT TCTC TCTT TCTC TCTT
136138 CATA * 5 19/20 CATA CATA CATA CATA TATA
142232 CACT * 5 18/20 CACT CACT CACT CACT CAGC
168290 CGAT * 5 18/20 CGAT CGAT CGAT CCAT CGTT
175528 AACT * 5 18/20 AACT AACT AGCT AACT AACA
219443 TCAC * 5 18/20 TCAC TCAC TCAC TCGC TCGC
227885 TGAC * 8 29/32 TGAC TGAC TGAC TGAC TGAC TGAC TGCA TGGC
235907 ACCA * 5 18/20 ACCA ACCA ACCA ACCA ACTT
255793 ATGG * 6 22/24 ATGG ATGG ATAG ATGG ATGA ATGG
-----------------------------------------------------------------------------
Total sequence length......................... 278196
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 17
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 AACT-1 ATGG-1 ACAA-1 ACTG-1 ACCA-1 TACA-2 TGAC-1
TGGA-1 TCAC-1 TCTT-1 GTAT-1 CATA-1 CACT-1 CTGA-1 CGAT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7303542|gb|AE003824.1|AE003824 Drosophila melanogaster genomic scaffold 142000013386047 section 34 of 52, complete sequence
Position Repeat Coverage Repeat
4280 AATA * 5 18/20 AATA AATA ATTA AGTA AATA
26613 TAAA * 5 18/20 TAAA TATA TAAA TATA TAAA
26893 TTAT * 5 18/20 TTAT TTAT TTAT ATAT TTTT
32423 GAAA * 5 18/20 GAAA GAAA AATA GAAA GAAA
42576 GACG * 5 20/20 GACG GACG GACG GACG GACG
53054 AGAA * 5 19/20 AGAA AGAA AGAA AGAA AGAT
53829 ATCT * 6 22/24 ATCT ATAT ATGT ATCT ATCT ATCT
128756 TATC * 5 18/20 TATC TATC TATC TATA GATC
150815 CACT * 5 18/20 CACT CTCT CACT CACT CGCT
160011 GATA * 5 18/20 GATA GATA GATA GATA GTTT
161553 TGGG * 5 18/20 TGGG TGGG TGGA TGAG TGGG
169100 ATGT * 5 18/20 ATGT ATTT ATCT ATGT ATGT
171543 GCCG * 5 18/20 GCCG GCCG GCCG ACCG TCCG
176604 CAGT * 5 18/20 CAGT CAGT CAGT CATC CAGT
246101 GGTT * 5 20/20 GGTT GGTT GGTT GGTT GGTT
-----------------------------------------------------------------------------
Total sequence length......................... 249001
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 15
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AATA-1 ATGT-1 ATCT-1 AGAA-1 TAAA-1 TATC-1 TTAT-1 TGGG-1
GAAA-1 GATA-1 GACG-1 GGTT-1 GCCG-1 CAGT-1 CACT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7303489|gb|AE003823.1|AE003823 Drosophila melanogaster genomic scaffold 142000013386047 section 33 of 52, complete sequence
Position Repeat Coverage Repeat
84244 AACG * 5 18/20 AACG AACG AACG AACG ACTG
87717 TGTA * 5 18/20 TGTA TGTA TGTA TGTA CGTG
87972 CCGA * 5 18/20 CCGA AGGA CCGA CCGA CCGA
122611 TGTC * 6 22/24 TGTC TGTC TGTC TGTC TGTT TGTT
138790 ATGT * 5 18/20 ATGT AGGT ATGT ATGT ACGT
151579 CTGG * 8 30/32 CTGG CTGG CTGG CTGG CTGG CTGG CTGG CTCT
154336 GTTG * 5 18/20 GTTG GATG GTTG GATG GTTG
154577 TATG * 9 34/36 TATG TATG TATA TATG TATG TTTG TATG TATG TATG
170076 TCTG * 5 18/20 TCTG TCTC TCTG TCTC TCTG
181767 TATC * 6 22/24 TATC TATC TATG TATC TATA TATC
196265 ATTT * 5 18/20 ATTT ATCC ATTT ATTT ATTT
225755 AATC * 5 18/20 AATC AATC AATA AATC AAAC
237475 TGTA * 5 18/20 TGTA TGTA TGTA TTTA TCTA
246723 TAAT * 5 19/20 TAAT TAAT TAAC TAAT TAAT
-----------------------------------------------------------------------------
Total sequence length......................... 262740
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 14
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AATC-1 AACG-1 ATTT-1 ATGT-1 TAAT-1 TATG-1 TATC-1 TGTA-2
TGTC-1 TCTG-1 GTTG-1 CTGG-1 CCGA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7303437|gb|AE003822.1|AE003822 Drosophila melanogaster genomic scaffold 142000013386047 section 32 of 52, complete sequence
Position Repeat Coverage Repeat
25950 TGGT * 6 22/24 TGGT TGGA TGGT TGTT TGGT TGGT
32265 CAGC * 5 18/20 CAGC CAGC CAGC CACC CAGT
47876 GATG * 6 24/24 GATG GATG GATG GATG GATG GATG
85437 TGTT * 6 22/24 TGTT TGTT TGTT TGTT TTTT TCTT
97441 CCAG * 5 18/20 CCAG TCAA CCAG CCAG CCAG
123426 GGTG * 5 18/20 GGTG GGTG GGTT GGTA GGTG
189187 TGTA * 5 18/20 TGTA TGTA TGTA TATA TATA
254135 TATG * 8 29/32 TATG TATG TACA TATG TATG TATG TATG TATA
258693 CCTG * 5 18/20 CCTG ACTG CCTG CCTG GCTG
261199 ACAT * 6 22/24 ACAT ACAT ATAT ACAT ACAT ATAT
263685 CGAA * 5 18/20 CGAA CGAA TGAA CGAC CGAA
-----------------------------------------------------------------------------
Total sequence length......................... 266350
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 11
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ACAT-1 TATG-1 TGTA-1 TGTT-1 TGGT-1 GATG-1 GGTG-1 CAGC-1
CGAA-1 CCAG-1 CCTG-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7303396|gb|AE003821.1|AE003821 Drosophila melanogaster genomic scaffold 142000013386047 section 31 of 52, complete sequence
Position Repeat Coverage Repeat
8740 GCCT * 5 18/20 GCCT GTCT GCCT GTCT GCCT
44024 TCCA * 5 18/20 TCCA TCCA ACCA TCGA TCCA
44045 CCAT * 12 44/48 CCAT CCAT CCAA CCAT CCAT CCAA CCAT CCAG CCAT CCAT CCAA CCAT
44097 CCAT * 5 18/20 CCAT CCAT CCGT CCAT TCAT
48860 TCAA * 5 18/20 TCAA TCAA TCAA TCAA TGTA
49597 GTGA * 6 22/24 GTGA GTGG GTGA GTGA GTGA CTGA
64474 TGTA * 5 18/20 TGTA AGTA TGTA TGTA TATA
77349 ATGG * 6 23/24 ATGG ATCG ATGG ATGG ATGG ATGG
92184 GCTC * 5 18/20 GCTC GCTC GCTC GTTC GTTC
128562 ATAC * 5 18/20 ATAC ATAC ATAT ATAC CTAC
151058 ATGT * 6 22/24 ATGT ACAT ATGT ATGT ATGT ATGT
165275 ATTA * 6 22/24 ATTA ATTA GTCA ATTA ATTA ATTA
213475 CATA * 5 18/20 CATA CATA CATA CATA TGTA
275262 GGAT * 5 18/20 GGAT GGAC GAAT GGAT GGAT
278308 CGTA * 5 18/20 CGTA CGTA CGTA TGTA CATA
282253 CCAA * 6 22/24 CCAA ACAA CCAA CCAA CCAA CCAG
-----------------------------------------------------------------------------
Total sequence length......................... 290711
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 16
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATAC-1 ATTA-1 ATGT-1 ATGG-1 TGTA-1 TCAA-1 TCCA-1 GTGA-1
GGAT-1 GCTC-1 GCCT-1 CATA-1 CGTA-1 CCAA-1 CCAT-2
----------------------------------------------------------------------------
Genomic sequence...
gi|7303370|gb|AE003820.1|AE003820 Drosophila melanogaster genomic scaffold 142000013386047 section 30 of 52, complete sequence
Position Repeat Coverage Repeat
9452 CATC * 5 20/20 CATC CATC CATC CATC CATC
62844 GAGT * 5 18/20 GAGT GAGT GAGT GAGA GATT
63191 ACAA * 8 30/32 ACAA TCAA ACAA ACAA ACAA ACAA ATAA ACAA
67467 GGAC * 6 22/24 GGAC GGAC GGAC GGAC GGAT GGAT
67505 ATGG * 5 18/20 ATGG ATGG GTGG ATGG ATAG
76752 TGTA * 5 18/20 TGTA TGTA TGTA TGTG TGTG
87063 CATA * 5 18/20 CATA CATA CATA CATA TGTA
110175 TATG * 5 18/20 TATG TATG TAAG TATG TATA
122412 TGCC * 5 19/20 TGCC TGCC TGCC TGCT TGCC
122865 TGAA * 5 19/20 TGAA TGAA TGAA TGAA CGAA
135958 ATAC * 5 19/20 ATAC ATAC ATAC ATAC ATAT
143011 TACA * 5 18/20 TACA TAAA TGCA TACA TACA
167394 AGCC * 6 22/24 AGCC AGCT AGTC AGCC AGCC AGCC
167496 CTGC * 5 19/20 CTGC CTGC CTGC CTGC CTGA
182184 CCGA * 8 30/32 CCGA CCGA CCGA CCGA CCGA CCGA CCGA CCTT
201667 TACA * 6 22/24 TACA TACA TACA TACA TATG TACA
206476 CTGG * 5 20/20 CTGG CTGG CTGG CTGG CTGG
208996 AGAT * 5 18/20 AGAT AGAT ATAT AGAT AGAG
223185 TACA * 6 24/24 TACA TACA TACA TACA TACA TACA
-----------------------------------------------------------------------------
Total sequence length......................... 272870
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 19
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATAC-1 ATGG-1 AGAT-1 AGCC-1 ACAA-1 TATG-1 TACA-3 TGAA-1
TGTA-1 TGCC-1 GAGT-1 GGAC-1 CATA-1 CATC-1 CTGG-1 CTGC-1
CCGA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7303326|gb|AE003819.1|AE003819 Drosophila melanogaster genomic scaffold 142000013386047 section 29 of 52, complete sequence
Position Repeat Coverage Repeat
3038 TGTT * 5 18/20 TGTT TGTT TGTT TGCT TGTG
4355 CTCA * 6 22/24 CTCA CTCA CTCA CTCG TTCA CTCA
6291 TATG * 5 18/20 TATG TATG TATG TACG TTTG
10845 GCAG * 5 19/20 GCAG GCAA GCAG GCAG GCAG
11273 GGAC * 5 18/20 GGAC GGAC GGAC GGAT GGAT
25600 CTGG * 7 26/28 CTGG CTGG CTGG CTGG CTGG CTGG GTGA
48775 TATT * 5 18/20 TATT TATT TGAT TATT TATT
84499 GCTG * 5 19/20 GCTG GCTG CCTG GCTG GCTG
127761 TAAA * 5 19/20 TAAA CAAA TAAA TAAA TAAA
138099 GCCA * 20 72/80 GCCA CCCA GCCA GCCA GCCA GCCA GCCA GCCA GCCA GCCA GCCA GCCA GCCA GCCA GCCA GCCA GCCA GCTG TCCT GAAC
152850 CAAT * 8 30/32 CAAT CAAT CAAA CAAT CAAT CAAT CAAT CAAA
232116 GGAT * 6 22/24 GGAT GGAT GGAT GGAT GGAT GCAC
236956 AGCC * 5 19/20 AGCC AGCC AGCC AGCC AGCA
-----------------------------------------------------------------------------
Total sequence length......................... 237528
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 13
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AGCC-1 TAAA-1 TATT-1 TATG-1 TGTT-1 GGAT-1 GGAC-1 GCAG-1
GCTG-1 GCCA-1 CAAT-1 CTGG-1 CTCA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7303288|gb|AE003818.1|AE003818 Drosophila melanogaster genomic scaffold 142000013386047 section 28 of 52, complete sequence
Position Repeat Coverage Repeat
35613 ATAC * 6 22/24 ATAC ATAC ATAC ATAT ATAC ATAT
39638 AATA * 5 18/20 AATA AATA AATA TTTA AATA
49592 TTTG * 5 18/20 TTTG TTTG TTTG TTTG ATTT
52450 AGAC * 5 18/20 AGAC AGAC AGAC AAAC ATAC
72677 GCTG * 5 18/20 GCTG GCAG GCTG GCTG GCAG
92628 CTGG * 6 22/24 CTGG CTCG ATGG CTGG CTGG CTGG
104392 CAAT * 6 22/24 CAAT CAAT CAAT CAAT GAAT CAAA
105043 CCAC * 6 22/24 CCAC CCAC CCAC CCAC ACAC CCGC
121524 CAGA * 5 18/20 CAGA CAGA CAGA CGGG CAGA
121573 GGAT * 6 23/24 GGAT GGAT AGAT GGAT GGAT GGAT
122231 TTGG * 5 18/20 TTGG TTGG CTGG TTGG TCGG
132931 AGCA * 5 18/20 AGCA GGCA ACCA AGCA AGCA
144207 CATA * 5 18/20 CATA TGTA CATA CATA CATA
192035 TATG * 5 19/20 TATG TATG TATG TATG TACG
205043 TACA * 5 18/20 TACA TACA TACA TACA TCCG
207374 GTAT * 5 18/20 GTAT GTAT GTAT GTAT GTGC
207540 ACCA * 5 19/20 ACCA ACCA ACCA ACCA CCCA
211758 GACA * 5 18/20 GACA GACA GACA GACG GACG
234506 TATG * 5 19/20 TATG TATG TATG TACG TATG
247505 TGGC * 6 24/24 TGGC TGGC TGGC TGGC TGGC TGGC
262647 TGAT * 6 23/24 TGAT TGAA TGAT TGAT TGAT TGAT
-----------------------------------------------------------------------------
Total sequence length......................... 264644
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 21
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AATA-1 ATAC-1 AGAC-1 AGCA-1 ACCA-1 TATG-2 TACA-1 TTTG-1
TTGG-1 TGAT-1 TGGC-1 GACA-1 GTAT-1 GGAT-1 GCTG-1 CAAT-1
CATA-1 CAGA-1 CTGG-1 CCAC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7303263|gb|AE003817.1|AE003817 Drosophila melanogaster genomic scaffold 142000013386047 section 27 of 52, complete sequence
Position Repeat Coverage Repeat
20349 CTAT * 6 22/24 CTAT CTAT CTAT CTGT CTAT GTAT
32552 TTTA * 5 18/20 TTTA TTTA TTTA TTTT TTTC
33714 CATA * 5 18/20 CATA CATA CATC CATG CATA
37485 CACT * 5 18/20 CACT CACT CACT CACA CACA
53023 TACA * 5 18/20 TACA TATG TACA TACA TACA
53108 ACAT * 8 30/32 ACAT ACAT ACAT ACAT ACAT ACAT ACAT ATGT
60609 ACAT * 6 22/24 ACAT ACAT GCAA ACAT ACAT ACAT
70769 ATAC * 6 22/24 ATAC ATAC ATAA ATAC ATAC ATAT
71066 GATA * 5 18/20 GATA AATA GATA GATA GATG
74922 ACCA * 5 18/20 ACCA ACCG AGCA ACCA ACCA
107435 TGTT * 5 19/20 TGTT TGTT CGTT TGTT TGTT
131072 TGAG * 5 18/20 TGAG TGAG TGAG TGAG AGAC
142923 CTGT * 11 40/44 CTGT ACGT CTGT CTGT CTGT CTGT CTGT CTAT CTGT CCGT CTGT
147942 TTGT * 5 18/20 TTGT TTTT TTTT TTGT TTGT
148300 CAGA * 7 26/28 CAGA CAGA CAGA CAGA CAGA TGGA CAGA
151041 CACT * 5 18/20 CACT CACT CACA CACC CACT
158531 CAGA * 5 18/20 CAGA CAGA CAGA CAGT CTGA
161581 ACAT * 5 18/20 ACAT ACAT AAAT ACAT ATAT
161643 GGCT * 5 18/20 GGCT AGCT GGCT CGCT GGCT
177864 ACTG * 11 40/44 ACTG ACTG ACTG GCTG ACTG ACTG ACTG ACTG ACAG TCGG ACTG
180819 CGGA * 6 22/24 CGGA CGGA CTGG CGGA CGGA CGGA
197478 GGTC * 5 19/20 GGTC GGTC GGTC GGTT GGTC
199593 CGGA * 5 19/20 CGGA CGAA CGGA CGGA CGGA
211328 GGCT * 6 22/24 GGCT GGCT GGCT GGAT GGCT GGGT
216714 TGTC * 5 19/20 TGTC TGTC TGTC TTTC TGTC
236004 CTCC * 5 18/20 CTCC CTCC CGCC GTCC CTCC
248604 ATTT * 5 18/20 ATTT ATTT CTTT ATCT ATTT
-----------------------------------------------------------------------------
Total sequence length......................... 262257
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 27
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATAC-1 ATTT-1 ACAT-3 ACTG-1 ACCA-1 TACA-1 TTTA-1 TTGT-1
TGAG-1 TGTT-1 TGTC-1 GATA-1 GGTC-1 GGCT-2 CATA-1 CAGA-2
CACT-2 CTAT-1 CTGT-1 CTCC-1 CGGA-2
----------------------------------------------------------------------------
Genomic sequence...
gi|7303233|gb|AE003816.1|AE003816 Drosophila melanogaster genomic scaffold 142000013386047 section 26 of 52, complete sequence
Position Repeat Coverage Repeat
28228 TCTG * 5 18/20 TCTG TCTG TCTG TCAG TCAG
36074 GTTT * 5 18/20 GTTT TTTT TTTT GTTT GTTT
39069 TTTG * 5 20/20 TTTG TTTG TTTG TTTG TTTG
48258 CAAT * 6 22/24 CAAT CAAT CAAT CAAT CAAT CATC
71259 ATAC * 5 18/20 ATAC AAAC AAAC ATAC ATAC
72405 TCTA * 5 18/20 TCTA TCTG TCTA TCTA TCTC
90726 CTCA * 5 18/20 CTCA CTCA CTCA CGCA CACA
104985 TGTA * 5 18/20 TGTA TATA TGTT TGTA TGTA
138048 TGTA * 6 22/24 TGTA TGTA TCTA TATA TGTA TGTA
163519 AACA * 5 18/20 AACA AAGA AACA AACA ATCA
190695 ATTA * 13 47/52 ATTA ATTA ATTA ATTA ATTA ATTA ATTA ATTA ATTA ATTA ATTA TTAA TATT
190747 AATT * 6 23/24 AATT AATT AATT AATT AATT AATA
191536 AAAT * 5 18/20 AAAT AAAT AAAT GACT AAAT
199404 TGTT * 5 18/20 TGTT TTTT TGTT TTTT TGTT
200035 CTGA * 9 34/36 CTGA ATGA CTGG CTGA CTGA CTGA CTGA CTGA CTGA
207173 TGTT * 6 23/24 TGTT TGTT TGTT TGTT TGTT TGTC
216973 AACC * 5 19/20 AACC AACC AACC AACC AATC
253195 ACAT * 5 18/20 ACAT AAAT ACAT AAAT ACAT
-----------------------------------------------------------------------------
Total sequence length......................... 260779
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 18
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 AATT-1 AACA-1 AACC-1 ATAC-1 ATTA-1 ACAT-1 TTTG-1
TGTA-2 TGTT-2 TCTA-1 TCTG-1 GTTT-1 CAAT-1 CTGA-1 CTCA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7303189|gb|AE003815.1|AE003815 Drosophila melanogaster genomic scaffold 142000013386047 section 25 of 52, complete sequence
Position Repeat Coverage Repeat
17751 GTAT * 5 19/20 GTAT GTAT ATAT GTAT GTAT
31182 GATC * 6 22/24 GATC GATC GATA GATC GATC GAGC
32203 TATG * 6 22/24 TATG CATG TATG TATG TATG TATA
42216 TCAC * 5 18/20 TCAC TCAC TCAC TCAC CCAG
42236 TCAG * 6 22/24 TCAG TCAG TCAG ACAG TCAG TCAT
59677 AATA * 5 18/20 AATA AATT AATA AATA AATT
62397 CAGT * 8 30/32 CAGT CAGT CAGT CAGT CAGT CAGT TAGC CAGT
63718 AAAT * 5 18/20 AAAT AAAT AAAT AAAA AACT
66806 TTGT * 5 18/20 TTGT TTTG TTGT TTGT TTGT
66914 TGTC * 5 19/20 TGTC TGTC TGTC TGAC TGTC
71782 GAAC * 5 19/20 GAAC GTAC GAAC GAAC GAAC
71825 AACG * 5 18/20 AACG AACA ATCG AACG AACG
74263 GTTA * 8 29/32 GTTA CTTA GTTA GTTA ATTA GTTA GTTA GTTG
82986 CTGC * 5 19/20 CTGC CTGG CTGC CTGC CTGC
86250 AATT * 5 18/20 AATT AATT AATA ATTT AATT
89210 GTGC * 5 18/20 GTGC GTGT GTGC GTGC GTGT
98585 GATA * 5 18/20 GATA GATA GAAA GATA CATA
136008 ATTG * 5 19/20 ATTG ATTG ATTG TTTG ATTG
145179 TTCT * 5 18/20 TTCT TTCT TTCT TTTT TTTT
147089 TATG * 5 19/20 TATG TATG TATG TATG TTTG
149262 ATTT * 5 18/20 ATTT TTTT ATTT ATTA ATTT
153419 CGAA * 5 19/20 CGAA CGAA CGAA CGAA TGAA
154021 AGTT * 10 36/40 AGTT AGTT AGTT TGTT AGTT AGTT AGTT AGTT ACTT GCTT
157989 ACAT * 5 18/20 ACAT ACAT ACAC ACAT ATAT
158276 CCGA * 6 23/24 CCGA TCGA CCGA CCGA CCGA CCGA
159662 TACA * 5 18/20 TACA TACA TATA TACA TATA
160466 ACGG * 5 18/20 ACGG ACAG GCGG ACGG ACGG
161270 CCAG * 8 30/32 CCAG CAAA CCAG CCAG CCAG CCAG CCAG CCAG
161938 AATT * 5 18/20 AATT AATT AATT AATT AGAT
179226 GCGA * 5 18/20 GCGA GCGA GAGA GCCA GCGA
188716 CATA * 5 18/20 CATA CATA CATA CACA CACA
190018 TATG * 6 22/24 TATG TAGG TATG TATG TATG TATT
-----------------------------------------------------------------------------
Total sequence length......................... 240495
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 32
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 AATA-1 AATT-2 AACG-1 ATTT-1 ATTG-1 AGTT-1 ACAT-1
ACGG-1 TATG-3 TACA-1 TTGT-1 TTCT-1 TGTC-1 TCAG-1 TCAC-1
GAAC-1 GATA-1 GATC-1 GTAT-1 GTTA-1 GTGC-1 GCGA-1 CATA-1
CAGT-1 CTGC-1 CGAA-1 CCAG-1 CCGA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7303162|gb|AE003814.1|AE003814 Drosophila melanogaster genomic scaffold 142000013386047 section 24 of 52, complete sequence
Position Repeat Coverage Repeat
31832 AACC * 8 30/32 AACC AACC AACC AACC AACC AACC AACG AACA
43249 ACCA * 5 18/20 ACCA ACCA ACAT ACCA ACCA
45593 TATG * 5 18/20 TATG TATG TATA TATG TCTG
49723 TCCA * 6 22/24 TCCA TCCA TCCA TCCA TCCG TCCG
64767 AAAT * 5 18/20 AAAT AAAC AAAC AAAT AAAT
75910 TGAC * 5 18/20 TGAC TGAC AAAC TGAC TGAC
88095 AAAT * 6 22/24 AAAT AAAT AAAT AAAT AATT AATT
142515 GACT * 6 22/24 GACT GACT GGCT GACC GACT GACT
147810 AGAA * 6 22/24 AGAA AGAA AGAA AGAA TGAA AAAA
152887 ATAC * 5 18/20 ATAC ATAC ATAC ATAT ATAA
176603 ATGA * 5 18/20 ATGA ATGA ATGA ATGA AAGG
176821 GGAT * 5 18/20 GGAT GGTT GGAT GGCT GGAT
200255 TGGC * 8 32/32 TGGC TGGC TGGC TGGC TGGC TGGC TGGC TGGC
240580 TAAA * 5 18/20 TAAA AAAA TAAA TAAA TAAT
-----------------------------------------------------------------------------
Total sequence length......................... 260713
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 14
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-2 AACC-1 ATAC-1 ATGA-1 AGAA-1 ACCA-1 TAAA-1 TATG-1
TGAC-1 TGGC-1 TCCA-1 GACT-1 GGAT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7303119|gb|AE003813.1|AE003813 Drosophila melanogaster genomic scaffold 142000013386047 section 23 of 52, complete sequence
Position Repeat Coverage Repeat
77493 TGGA * 5 18/20 TGGA TGGG TGGA TGGA TGGG
120937 AAAT * 5 18/20 AAAT AAAT AAAT AAAT AATG
169961 AAAT * 6 23/24 AAAT AAAT AAAT AAAT AAAT AACT
175068 AAAG * 5 18/20 AAAG AAAG AAAG AATG AAAA
192321 AAAC * 5 18/20 AAAC AAAC AAAC AAAT AAAG
198857 ACCA * 5 19/20 ACCA ACCA ACCA ACCA CCCA
219254 GTCA * 5 18/20 GTCA GTCA GTCA GTCA GTAG
220567 AGGA * 6 23/24 AGGA AGGA AGGC AGGA AGGA AGGA
242215 GTCC * 6 22/24 GTCC GTTC GTCC GTCC ATCC GTCC
256663 ACCC * 5 18/20 ACCC AACC ACCC AACC ACCC
-----------------------------------------------------------------------------
Total sequence length......................... 258778
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 10
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-2 AAAG-1 AAAC-1 AGGA-1 ACCA-1 ACCC-1 TGGA-1 GTCA-1
GTCC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7303102|gb|AE003812.1|AE003812 Drosophila melanogaster genomic scaffold 142000013386047 section 22 of 52, complete sequence
Position Repeat Coverage Repeat
48640 ATAC * 5 18/20 ATAC ATAC ATAC ATAC GTAT
65171 ATAC * 5 18/20 ATAC ATAT ATAC ATAT ATAC
65195 ATAC * 5 18/20 ATAC ATAT ATAC ATAT ATAC
65219 ATAC * 5 18/20 ATAC ATAT ATAC ATAT ATAC
65243 ATAC * 5 18/20 ATAC ATAT ATAC ATAT ATAC
65267 ATAC * 5 18/20 ATAC ATAT ATAC ATAT ATAC
65311 CATA * 5 18/20 CATA TATA CATA TATA CATA
65332 ATAC * 5 18/20 ATAC ATAT ATAC ATAT ATAC
65356 ATAC * 5 18/20 ATAC ATAT ATAC ATAT ATAC
65388 ATAC * 5 18/20 ATAC ATAT ATAC ATAT ATAC
65412 ATAC * 5 18/20 ATAC ATAT ATAC ATAT ATAC
65436 ATAC * 5 18/20 ATAC ATAT ATAC ATAT ATAC
65460 ATAC * 5 18/20 ATAC ATAT ATAC ATAT ATAC
65484 ATAC * 5 18/20 ATAC ATAT ATAC ATAT ATAC
65508 ATAC * 5 18/20 ATAC ATAT ATAC ATAT ATAC
65532 ATAC * 5 18/20 ATAC ATAT ATAC ATAT ATAC
65556 ATAC * 5 18/20 ATAC ATAT ATAC ATAT ATAC
65580 ATAC * 5 18/20 ATAC ATAT ATAC ATAT ATAC
65607 ACAT * 5 18/20 ACAT ATAT ACAT ATAT ACAT
65673 TACA * 5 18/20 TACA TATA TACA TATA TACA
67977 TGGC * 6 23/24 TGGC TGGT TGGC TGGC TGGC TGGC
78952 CCAG * 5 20/20 CCAG CCAG CCAG CCAG CCAG
88799 CAAC * 5 18/20 CAAC CAAC CAAC CAAC TACC
92905 GTGG * 5 18/20 GTGG TTGG GTGG TTGG GTGG
108536 TATG * 8 31/32 TATG TATG TATG TATG TATG TATG TATG TATA
117858 CCAG * 5 18/20 CCAG TCAG CCAG CCAT CCAG
139838 AGCT * 5 18/20 AGCT CGGT AGCT AGCT AGCT
140496 CACT * 7 26/28 CACT CACT CACT CACT CACT TGCT CACT
140697 TATT * 8 29/32 TATT TATT TATT TATT TATT TATT TATT ACTA
151094 ACAG * 5 18/20 ACAG ACAA ACAG ACAG ACAC
152079 TACA * 5 18/20 TACA TACA TATA TACA TATA
152770 GTAC * 5 19/20 GTAC ATAC GTAC GTAC GTAC
156640 CTGG * 5 18/20 CTGG CAAG CTGG CTGG CTGG
181540 AAGT * 5 20/20 AAGT AAGT AAGT AAGT AAGT
183610 AGTG * 5 18/20 AGTG AGTG AGTG TGTG TGTG
222506 TAAA * 5 18/20 TAAA TAAC CAAA TAAA TAAA
232640 ACAT * 6 22/24 ACAT ACTT ATAT ACAT ACAT ACAT
-----------------------------------------------------------------------------
Total sequence length......................... 257946
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 37
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAGT-1 ATAC-17 AGTG-1 AGCT-1 ACAT-2 ACAG-1 TAAA-1 TATT-1
TATG-1 TACA-2 TGGC-1 GTAC-1 GTGG-1 CAAC-1 CATA-1 CACT-1
CTGG-1 CCAG-2
----------------------------------------------------------------------------
Genomic sequence...
gi|7303071|gb|AE003811.1|AE003811 Drosophila melanogaster genomic scaffold 142000013386047 section 21 of 52, complete sequence
Position Repeat Coverage Repeat
11048 CGAC * 5 19/20 CGAC CAAC CGAC CGAC CGAC
26192 GCTG * 5 19/20 GCTG GTTG GCTG GCTG GCTG
60477 GTCA * 5 19/20 GTCA GTCA GTCA GTCA GCCA
80656 TATT * 5 18/20 TATT TATT TTTT TATG TATT
98135 ATTT * 5 18/20 ATTT ATTT ATTT ATAT CTTT
116588 GCTG * 6 23/24 GCTG GCTG GCTG GCTG GCTA GCTG
128756 GTCG * 5 18/20 GTCG GTCG GTCG GTGG GTTG
130112 AAAC * 5 18/20 AAAC AAAC AAAC AAAC AGCC
142512 TTCT * 6 22/24 TTCT TTCT TTCT TTCT GTCA TTCT
142962 AAAT * 6 23/24 AAAT AAAT AAAT AAAT AAAT AAAA
175220 CAAA * 8 30/32 CAAA CAAA CAAA CAAA CCAA CAAA CAAA CAGA
179813 TTTC * 6 22/24 TTTC TTTC TTTC TTTC TTTC TTCA
195349 TTAT * 6 22/24 TTAT TTAT TTAG TTTT TTAT TTAT
-----------------------------------------------------------------------------
Total sequence length......................... 259379
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 13
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 AAAC-1 ATTT-1 TATT-1 TTAT-1 TTTC-1 TTCT-1 GTCA-1
GTCG-1 GCTG-2 CAAA-1 CGAC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7303048|gb|AE003810.1|AE003810 Drosophila melanogaster genomic scaffold 142000013386047 section 20 of 52, complete sequence
Position Repeat Coverage Repeat
789 CCTG * 10 36/40 CCTG CCTG CCTG CCTG CCTG CCTG ACTG ACTG ACTG ACTG
29578 CCAT * 10 36/40 CCAT CCTT CCAA CCAT CCAT CCAT CCAT CCAT CCGT CTAT
38413 ATTG * 5 18/20 ATTG ATTG ATTG ATTG AACG
44711 TGGC * 5 18/20 TGGC TGGC TGAC TGCC TGGC
48275 CGGT * 6 23/24 CGGT CGGT CGGT GGGT CGGT CGGT
69052 CGCA * 5 18/20 CGCA CGCA CGCA CACA CACA
69102 AACA * 5 18/20 AACA AACA AACA AATA AAAA
80658 TGGG * 5 18/20 TGGG TGGA TGGG TGGG CGGG
96049 GTCA * 5 18/20 GTCA GTCA GTCA GTCA TTGA
153795 ATCC * 6 22/24 ATCC ATCC ATCC ATCC AACC AACC
157956 ATAA * 6 22/24 ATAA ATAA ATAT ATAA ATAA ATAT
160340 GACT * 5 18/20 GACT GACC GACC GACT GACT
192563 CATC * 5 19/20 CATC CATC CATC CATC CAGC
196191 GACT * 5 18/20 GACT GACT GAAT GACG GACT
225352 CCTG * 5 18/20 CCTG CCTG GCTG ACTG CCTG
232822 CAGT * 8 29/32 CAGT CCAT CAGT CAGT CAGT CAGT CAGT CATT
244659 TATT * 5 18/20 TATT TATT TATG TATA TATT
-----------------------------------------------------------------------------
Total sequence length......................... 258873
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 17
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AACA-1 ATAA-1 ATTG-1 ATCC-1 TATT-1 TGGG-1 TGGC-1 GACT-2
GTCA-1 CATC-1 CAGT-1 CGGT-1 CGCA-1 CCAT-1 CCTG-2
----------------------------------------------------------------------------
Genomic sequence...
gi|7303026|gb|AE003809.1|AE003809 Drosophila melanogaster genomic scaffold 142000013386047 section 19 of 52, complete sequence
Position Repeat Coverage Repeat
15018 CAGA * 5 18/20 CAGA GAGA CAGA CAGA CGGA
32703 GACG * 5 18/20 GACG AACG GATG GACG GACG
34777 ACCG * 5 18/20 ACCG ACCG ACCG ACCG ATCC
39709 AAGC * 5 18/20 AAGC AAGC AAGC GAGC GAGC
44061 TGTA * 6 23/24 TGTA TGTA TGTA TGTA TGTA TATA
78465 TATG * 5 19/20 TATG TATG TATG TATG TGTG
83401 TTTC * 5 18/20 TTTC TTTC TTTT TTTC TTTT
91628 GCCA * 5 19/20 GCCA GCCA GCCA GCCA GCCG
109075 ATGG * 5 19/20 ATGG ATGG ATGG ATAG ATGG
140188 TATT * 5 18/20 TATT TATT TATT TATT TCAT
144406 TGTC * 5 18/20 TGTC TGTC TGCC TGTC CGTC
160168 TGTT * 5 19/20 TGTT TGTC TGTT TGTT TGTT
168758 TTTA * 5 18/20 TTTA TTTA TTTA TTTA TATT
176472 CAGG * 5 18/20 CAGG CAGC CAGG CAGG CAGA
187270 GGTT * 8 29/32 GGTT GGTT GGTT GGTT GGTT GGTT GGTC TGTG
197494 AGCC * 6 22/24 AGCC AGCC AGCA AGCC AGCC ATCC
207001 CGTG * 5 18/20 CGTG CGTG CGTG TGTG TGTG
212817 TATG * 5 19/20 TATG TATG TATG TATG TACG
226255 AAGT * 6 22/24 AAGT AAGT AAGT AAGT ATGT ATGT
233695 AATA * 5 18/20 AATA AATA AATA AAAA ATTA
259416 GGAC * 6 22/24 GGAC AAAC GGAC GGAC GGAC GGAC
-----------------------------------------------------------------------------
Total sequence length......................... 260968
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 21
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AATA-1 AAGT-1 AAGC-1 ATGG-1 AGCC-1 ACCG-1 TATT-1 TATG-2
TTTA-1 TTTC-1 TGTA-1 TGTT-1 TGTC-1 GACG-1 GGAC-1 GGTT-1
GCCA-1 CAGA-1 CAGG-1 CGTG-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7302975|gb|AE003808.1|AE003808 Drosophila melanogaster genomic scaffold 142000013386047 section 18 of 52, complete sequence
Position Repeat Coverage Repeat
9486 TGGG * 6 22/24 TGGG TTGG TGTG TGGG TGGG TGGG
45987 GCAC * 5 18/20 GCAC GCAC GCAC ACAT GCAC
66929 ATAC * 5 18/20 ATAC GTAG ATAC ATAC ATAC
115420 TACA * 5 18/20 TACA TACA TACA TACG TACG
127129 GCCA * 6 22/24 GCCA GGCA GCCA GGCA GCCA GCCA
129627 CAGC * 5 18/20 CAGC CAGC CAGC CATC CAGT
136103 TTTA * 5 18/20 TTTA TTTA TTCA TTCA TTTA
137492 TCCA * 6 23/24 TCCA TCCA TCCA TCCA TCCA TCTA
140742 AGAT * 5 18/20 AGAT AGAT ACAT AGAT GGAT
143694 CCAT * 5 18/20 CCAT CCAA CCAT CCAC CCAT
145191 AGGA * 6 22/24 AGGA AGGA AGGA AGTC AGGA AGGA
172257 ACAT * 5 18/20 ACAT ACAT ACAT ATAT ACCT
197094 TTTG * 5 18/20 TTTG TTTT TTTG TTTT TTTG
237073 GCAG * 6 22/24 GCAG GCAG GCAG GCAG GCAG GAGG
247060 CCCA * 5 18/20 CCCA CCCA CCCA CACA CACA
-----------------------------------------------------------------------------
Total sequence length......................... 262173
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 15
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATAC-1 AGAT-1 AGGA-1 ACAT-1 TACA-1 TTTA-1 TTTG-1 TGGG-1
TCCA-1 GCAG-1 GCAC-1 GCCA-1 CAGC-1 CCAT-1 CCCA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7302923|gb|AE003807.1|AE003807 Drosophila melanogaster genomic scaffold 142000013386047 section 17 of 52, complete sequence
Position Repeat Coverage Repeat
80 TTTG * 9 33/36 TTTG TTTG TTTG TTTG TTTA TTTA TTTG CTTG TTTG
14453 CAGT * 6 23/24 CAGT CAGT CAGT CAGT CAGT CAAT
23407 TATG * 5 18/20 TATG TATG TATG TACA TATG
37128 AAAG * 5 18/20 AAAG AAAG AAAG AAAA AAAA
61135 CCAA * 7 26/28 CCAA CCAA CCAA CCAA CCAA CCAG CCAG
61931 TTTG * 5 20/20 TTTG TTTG TTTG TTTG TTTG
62704 CCAC * 5 19/20 CCAC CCAC CCAA CCAC CCAC
92113 CCAT * 5 19/20 CCAT CCAT CCAT CCAT CCAC
148086 GCCA * 6 22/24 GCCA GCCA GCCA GCCA GCTA GCGA
158521 ATCT * 89 321/356 ATCT ATCT ATCT ATCT ATTT ATCC ATCT ATCT ATCT ATCT ATCT ATCT TTCT CTCT CTCT ATCT ATCT ATCT ATAT ATCT ATCT ATAT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATAT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATAT ATCT ATCT ATCT CTCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT CTCT ATCT ATCT ATCT ATAT ATAT TAAC GAAT CTAT TATC TTAT CAAT TGTC
245010 CTAT * 5 19/20 CTAT CTAT CTAT CTAT ATAT
248347 GCCA * 5 18/20 GCCA ACCA GCCA ACCA GCCA
248369 CAGC * 5 18/20 CAGC CAGC TAGC TAGC CAGC
259033 TTGG * 8 30/32 TTGG CTGG TTGA TTGG TTGG TTGG TTGG TTGG
-----------------------------------------------------------------------------
Total sequence length......................... 260067
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 14
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAG-1 ATCT-1 TATG-1 TTTG-2 TTGG-1 GCCA-2 CAGT-1 CAGC-1
CTAT-1 CCAA-1 CCAT-1 CCAC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7302890|gb|AE003806.1|AE003806 Drosophila melanogaster genomic scaffold 142000013386047 section 16 of 52, complete sequence
Position Repeat Coverage Repeat
4966 TACT * 5 18/20 TACT TAAT TACT TACT CACT
15155 TGGC * 6 23/24 TGGC TGGC TGGC TGGC TGGC TGCC
17857 TGGA * 5 18/20 TGGA TGGG TGGA TGGG TGGA
39690 TGCC * 5 19/20 TGCC AGCC TGCC TGCC TGCC
45206 ACAA * 5 18/20 ACAA ACAC ACAC ACAA ACAA
56640 TATT * 5 18/20 TATT TATT TATT TATT TAAA
80275 GGAT * 5 18/20 GGAT GGTT GGAT GGAT GGAC
82112 ACAT * 5 19/20 ACAT ACAT ACAT AGAT ACAT
85650 AAAC * 5 18/20 AAAC AAAT AAAC AAAC ACAC
99250 TTGA * 8 29/32 TTGA TTGA TTGA TTGA TTGA TTGA TTGT TGGC
104811 GTGG * 5 18/20 GTGG GTGG TTTG GTGG GTGG
107195 CATT * 5 18/20 CATT CATT CATT CATT CACA
119273 CAAA * 5 19/20 CAAA CAGA CAAA CAAA CAAA
143563 GGAC * 6 22/24 GGAC AAAC GGAC GGAC GGAC GGAC
145322 TATG * 5 18/20 TATG TATG TATG TATG TAGA
149115 TTTA * 6 22/24 TTTA TTTA TTTA TTTA TTTT TTTT
151290 CTTT * 5 18/20 CTTT CTTA CTTT CTTA CTTT
161181 AAGA * 5 18/20 AAGA AAGC AATA AAGA AAGA
161532 TATG * 5 18/20 TATG TACA TATG TATG TATG
209635 GGAT * 5 18/20 GGAT GGAT GGAT GGAT GGCA
237416 TTTA * 5 18/20 TTTA TTTA TTTA TTTC TTTT
243939 GTCC * 6 23/24 GTCC GTCC GTCC GTCC GTCC GTCG
260706 CATT * 5 18/20 CATT CATT CGTT CATT TATT
-----------------------------------------------------------------------------
Total sequence length......................... 268219
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 23
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAC-1 AAGA-1 ACAA-1 ACAT-1 TATT-1 TATG-2 TACT-1 TTTA-2
TTGA-1 TGGA-1 TGGC-1 TGCC-1 GTGG-1 GTCC-1 GGAT-2 GGAC-1
CAAA-1 CATT-2 CTTT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7302851|gb|AE003805.1|AE003805 Drosophila melanogaster genomic scaffold 142000013386047 section 15 of 52, complete sequence
Position Repeat Coverage Repeat
449 GTTA * 5 19/20 GTTA GTTA TTTA GTTA GTTA
35832 TGTA * 5 18/20 TGTA ATTA TGTA TGTA TGTA
50542 ACTG * 6 22/24 ACTG ACTG ACTG ACTG ACTG GGTG
73608 TTTA * 5 19/20 TTTA TTTA TTTA TTTA TTTT
84885 TTTA * 5 18/20 TTTA TTTA TTTT TTTC TTTA
104836 CCTC * 5 18/20 CCTC CCTC CCTC TCTC GCTC
107058 CCAC * 5 18/20 CCAC CCAC CCAC CAAC ACAC
139478 CGAG * 5 18/20 CGAG CGAG CAAG CGAG TGAG
157870 TGCC * 5 18/20 TGCC TGAC TGCC TGGC TGCC
171291 GACG * 5 18/20 GACG GACG AACG GACG GACA
174708 TTTG * 5 18/20 TTTG TTTG TTTG TTGG TTTT
178557 AAAT * 5 18/20 AAAT AGGT AAAT AAAT AAAT
180670 AACA * 8 29/32 AACA AACA AACA AACA AACA AATG AACA AATA
188264 TGTA * 5 18/20 TGTA GGTA CGTA TGTA TGTA
211083 TACA * 5 18/20 TACA TACA TACA TATG TACA
225922 CTTC * 6 22/24 CTTC CTTC CTTC CTTT CTTC CTTT
257417 TGTT * 6 23/24 TGTT TGTT TGCT TGTT TGTT TGTT
264086 TATG * 6 22/24 TATG TATA TATG TATG TATG TATA
270099 TACA * 5 18/20 TACA TATG TACA TACA TACA
-----------------------------------------------------------------------------
Total sequence length......................... 270307
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 19
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AAAT-1 AACA-1 ACTG-1 TATG-1 TACA-2 TTTA-2 TTTG-1 TGTA-2
TGTT-1 TGCC-1 GACG-1 GTTA-1 CTTC-1 CGAG-1 CCAC-1 CCTC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7302807|gb|AE003804.1|AE003804 Drosophila melanogaster genomic scaffold 142000013386047 section 14 of 52, complete sequence
Position Repeat Coverage Repeat
2243 TTGT * 5 20/20 TTGT TTGT TTGT TTGT TTGT
4694 TGGA * 11 41/44 TGGA TGGA TGGA TGGT TAGA TGGA TGGA TGGA TGGA TGGA TGGC
21260 AGCT * 5 18/20 AGCT AGCT AGCT AGTT CGCT
34420 ATAA * 5 19/20 ATAA ATAA ATAA ATAA AAAA
70277 GACA * 6 22/24 GACA GACA GACA GACA GACA TACG
83732 ACAT * 5 18/20 ACAT ACAA ACAT ACAC ACAT
89346 CCAT * 5 18/20 CCAT CCAT CCAT CTAT CTAT
89367 TATC * 5 20/20 TATC TATC TATC TATC TATC
114507 TATG * 5 18/20 TATG TATG TATG TATG CAGG
172238 AATA * 5 19/20 AATA AATA AATA AATA AATT
227905 GACT * 5 19/20 GACT GACT GACT GACT GAGT
229099 ACAT * 5 18/20 ACAT GCAT GCAT ACAT ACAT
244782 ATTT * 5 18/20 ATTT ATTT ATTT ATCT ACTT
246476 GCTC * 5 18/20 GCTC GCTC GCTC GCTC GCCT
-----------------------------------------------------------------------------
Total sequence length......................... 259817
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 14
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AATA-1 ATAA-1 ATTT-1 AGCT-1 ACAT-2 TATG-1 TATC-1 TTGT-1
TGGA-1 GACA-1 GACT-1 GCTC-1 CCAT-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7302766|gb|AE003803.1|AE003803 Drosophila melanogaster genomic scaffold 142000013386047 section 13 of 52, complete sequence
Position Repeat Coverage Repeat
5402 ATCC * 5 19/20 ATCC ATCC ATCC ATCC ATCG
9289 GTTT * 7 26/28 GTTT GTTT GTTT GTTC GTTT GTTT GTCT
10214 CCAC * 5 18/20 CCAC CCAC CGAC CCAC ACAC
63892 TATT * 6 22/24 TATT TATT TATT CATT TAGT TATT
76792 TGTT * 5 18/20 TGTT TGTT TGTT TGTG TGTG
77068 TGTA * 5 18/20 TGTA TGCA TGTA AGTA TGTA
85869 TACA * 5 18/20 TACA TACA TATG TACA TACA
95871 TACA * 5 18/20 TACA TACA TACA TACA TATG
150962 TCAT * 5 18/20 TCAT TCAT TCAT TAAT GCAT
152511 GTCC * 6 22/24 GTCC GTCC GTCC GTCT GTCC GTCT
156488 ATTT * 5 18/20 ATTT ACTT ATTT ATTT ATGT
157004 GCTG * 5 18/20 GCTG GCTG GCTG GCTG GTTA
167547 TGTT * 5 18/20 TGTT TACT TGTT TGTT TGTT
185118 GTTG * 5 18/20 GTTG ATTG GTTG ATTG GTTG
208213 GTAC * 5 18/20 GTAC ATAC GTAC ATAC GTAC
210450 ATGA * 5 18/20 ATGA ATGA ATGA ATGA GTGC
211893 ACAG * 5 18/20 ACAG ACGG ATAG ACAG ACAG
219936 ACCA * 5 18/20 ACCA ACTA ACCA ACCA ACCG
229616 GACA * 7 26/28 GACA GACA GACA GGCA GGCA GACA GACA
235059 CACG * 5 19/20 CACG CACG CACG CATG CACG
236306 CTCA * 5 18/20 CTCA CACA CTCA CTCA CTCT
248206 TGGC * 5 19/20 TGGC TGGC TGCC TGGC TGGC
258459 ATTT * 5 18/20 ATTT ACTT ATTT ATTT TTTT
260128 ATAC * 8 29/32 ATAC ATGC ATAC ATAC ATAC ATAC AAAC ATAT
279475 TTGT * 5 18/20 TTGT TTGT TTGT TTGT TTTC
-----------------------------------------------------------------------------
Total sequence length......................... 282588
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 25
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
ATAC-1 ATTT-2 ATGA-1 ATCC-1 ACAG-1 ACCA-1 TATT-1 TACA-2
TTGT-1 TGTA-1 TGTT-2 TGGC-1 TCAT-1 GACA-1 GTAC-1 GTTT-1
GTTG-1 GTCC-1 GCTG-1 CACG-1 CTCA-1 CCAC-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7302706|gb|AE003802.1|AE003802 Drosophila melanogaster genomic scaffold 142000013386047 section 12 of 52, complete sequence
Position Repeat Coverage Repeat
40336 GTCA * 5 18/20 GTCA GTCA GTCG GTCA CTCA
72191 CTGG * 11 40/44 CTGG CTGG CTGG CTGA CTGG CTGA CTGG CTAG CTGG TTGG CTGG
122938 GCCA * 8 29/32 GCCA GCCA GCCA TCCA ACCA GCCA GCCA GGCA
123529 CTTT * 5 18/20 CTTT GCTT CTTT CTTT CTTT
148559 GAAT * 5 18/20 GAAT GTAT AAAT GAAT GAAT
157328 ACGT * 6 22/24 ACGT ACGT ACGT ACGT ACAT ACAT
218252 AATC * 5 18/20 AATC AATC AATC AATC AAAA
220783 TTTA * 6 22/24 TTTA TTTG TTTA TTTA TTTA TTTT
-----------------------------------------------------------------------------
Total sequence length......................... 262401
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 8
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AATC-1 ACGT-1 TTTA-1 GAAT-1 GTCA-1 GCCA-1 CTTT-1 CTGG-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7302679|gb|AE003801.1|AE003801 Drosophila melanogaster genomic scaffold 142000013386047 section 11 of 52, complete sequence
Position Repeat Coverage Repeat
14493 ACCA * 5 18/20 ACCA ACCA ACCA ACCA GCCG
35320 GGCT * 8 29/32 GGCT GGCT GGCT GGCA GGTT GGCT GGCT GGCA
66602 CTGA * 5 18/20 CTGA CTGA CTGG CTGA CTGG
69772 CACC * 5 18/20 CACC CACA CACC CACA CACC
69796 CACC * 5 18/20 CACC CACA CACC CACA CACC
84380 GTGG * 6 22/24 GTGG GTGT GTGG GTGG GTGT GTGG
93105 TTTG * 5 18/20 TTTG TTTG TTTG TTTG TCTA
94817 ACAT * 6 22/24 ACAT ACAT ACAT ACAT GCGT ACAT
101915 TATG * 5 18/20 TATG TATG TACA TATG TATG
124699 GCCA * 5 19/20 GCCA GCCA GCCA GGCA GCCA
168672 CTTC * 5 19/20 CTTC CTTC CTTC CTTC CTGC
202490 CATA * 5 18/20 CATA CATA TGTA CATA CATA
226025 TTTG * 5 18/20 TTTG TGTG TTTG TCTG TTTG
233219 TTGG * 7 27/28 TTGG TTGG TTGG TTGG TTGG TTGG CTGG
240558 ATAA * 5 18/20 ATAA ATAA ATAA ATGC ATAA
240762 ACAT * 5 18/20 ACAT ACAT GCAT ACAT ATAT
257651 GACC * 5 18/20 GACC GACC AACC GACC GATC
261177 GACA * 5 19/20 GACA GACA GACA GACG GACA
265620 AACA * 6 22/24 AACA AACC AACA AACA AACA AAAA
-----------------------------------------------------------------------------
Total sequence length......................... 272650
Minimum Tetra-Nucleotide repeat units......... 5
maximum mismatch allowed...................... 10%
Total number of repeats detected.............. 19
-----------------------------------------------------------------------------
Frequency of Tetra-Nucleotide Repeats
AACA-1 ATAA-1 ACAT-2 ACCA-1 TATG-1 TTTG-2 TTGG-1 GACA-1
GACC-1 GTGG-1 GGCT-1 GCCA-1 CATA-1 CACC-2 CTTC-1 CTGA-1
----------------------------------------------------------------------------
Genomic sequence...
gi|7302632|gb|AE003800.1|AE003800 Drosophila melanogaster genomic scaffold 142000013386047 section 10 of 52, complete sequence
Position Repeat Coverage Repeat
1684 ACAG * 6 22/24 ACAG ACAG ACAG ACAG ACGG ACTG
3625 GGTG * 5 18/20 GGTG GGTA GGTG GGTG GGGG
8390 CATA * 5 18/20 CATA CGTA CATA CATA TATA
10821 TGGC * 5 18/20 TGGC TCGC TGGC TGAC TGGC
10997 TTGG * 6 23/24 TTGG TTGG TTGG TTGG TTGG TTGC
17260 GTAT * 6 22/24 GTAT GTAT GTAC GTAT GTAT GTGT
17680 ATGT * 5 19/20 ATGT ATGT ATGT AGGT ATGT
24806 TATG * 5 18/20 TATG TATG CATA TATG TATG
40518 CTGC * 5 18/20 CTGC CTGC CTGC CTGC CTTT
49338 CTTT * 5 18/20 CTTT TTTT CTTT TTTT CTTT
78351 CCAT * 7 26/28 CCAT CCAT CCAT CCAT CCAT CCAT CTAC
93390 GGAT * 5 19/20 GGAT GGAT GGAT GGAT GGTT
93428 TTGG * 5 18/20 TTGG TTGG ATGG ATGG TTGG
100977 AGGC * 8 29/32 AGGC AGGC TGGC AGGC AGGC AGGC AGGC AGAA
107200 GTTT * 5 18/20 GTTT GTTT GTTT GTTT GCTG
107546 GTTT * 5 18/20 GTTT GTTT GTTT GTAC GTTT
115517 TAAA * 5 18/20 TAAA TAAA TAAA TGAA TTAA
141958 CAGC * 6 22/24 CAGC CAGC CAGC CAGC CAGT CATC
193986 TTTG * 5 18/20 TTTG TTTG TTTG TTTT TTTT
194684 TTTC * 5 18/20 TTTC TTTC TTTC TTTC TATT
199417