Tetra-Nucleotide Repeats in Genomic Sequences Tetra-Nucleotide Repeats in
Drosophila melanogaster Chromosome-Arm-2R Genomic Scaffolds


Genomic sequence...
gi|7289019|gb|AE002937.1|AE002937 Drosophila melanogaster genomic scaffold 142000013385320, complete sequence
 Position  Repeat    Coverage  Repeat 

     2022  TTTA *  6  22/24    TTTA CTTA TTCA TTTA TTTA TTTA
-----------------------------------------------------------------------------
 Total sequence length.........................       3612 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       1 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 TTTA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7289079|gb|AE003017.1|AE003017 Drosophila melanogaster genomic scaffold 142000013385367, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       19141 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289475|gb|AE003048.1|AE003048 Drosophila melanogaster genomic scaffold 142000013385699, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       29176 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289453|gb|AE003279.1|AE003279 Drosophila melanogaster genomic scaffold 142000013385680, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       7951 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289112|gb|AE003322.1|AE003322 Drosophila melanogaster genomic scaffold 142000013385396, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       43718 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289300|gb|AE002594.1|AE002594 Drosophila melanogaster genomic scaffold 142000013385553, complete sequence
 Position  Repeat    Coverage  Repeat 

    10955  AAAT *  5  18/20    AAAT AAAT AAAT AAGT AAAC
-----------------------------------------------------------------------------
 Total sequence length.........................       11918 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       1 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7289520|gb|AE002621.1|AE002621 Drosophila melanogaster genomic scaffold 142000013385737, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       2655 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289039|gb|AE002630.1|AE002630 Drosophila melanogaster genomic scaffold 142000013385333, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       12312 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7288934|gb|AE002639.1|AE002639 Drosophila melanogaster genomic scaffold 142000013385246, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       13170 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289090|gb|AE002666.1|AE002666 Drosophila melanogaster genomic scaffold 142000013385377, complete sequence
 Position  Repeat    Coverage  Repeat 

    10780  AATA *  5  18/20    AATA CATA AACA AATA AATA
-----------------------------------------------------------------------------
 Total sequence length.........................       24153 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       1 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AATA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7288943|gb|AE002691.1|AE002691 Drosophila melanogaster genomic scaffold 142000013385255, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       32417 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7288917|gb|AE002726.1|AE002726 Drosophila melanogaster genomic scaffold 142000013385230, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       1893 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289853|gb|AE002751.1|AE002751 Drosophila melanogaster genomic scaffold 142000013386031, complete sequence
 Position  Repeat    Coverage  Repeat 

    23959  ATAC *  6  22/24    ATAC ATAT ATAC ATAC ACAC ATAC
    50931  ATTA *  9  33/36    ATTA ATTA ATTA ATGA ATTA ATGA ATTA ATTA ATTT
-----------------------------------------------------------------------------
 Total sequence length.........................       107231 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       2 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATAC-1    ATTA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7289862|gb|AE002760.1|AE002760 Drosophila melanogaster genomic scaffold 142000013386034, complete sequence
 Position  Repeat    Coverage  Repeat 

    51650  ATTC *  5  18/20    ATTC ATTC ATTC ATTC AGTT
-----------------------------------------------------------------------------
 Total sequence length.........................       62674 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       1 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATTC-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7289517|gb|AE002761.1|AE002761 Drosophila melanogaster genomic scaffold 142000013385734, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       4416 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289299|gb|AE002770.1|AE002770 Drosophila melanogaster genomic scaffold 142000013385552, complete sequence
 Position  Repeat    Coverage  Repeat 

    29023  TTTA *  5  19/20    TTTA TTTA TTTA TTTA TTTT
-----------------------------------------------------------------------------
 Total sequence length.........................       32269 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       1 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 TTTA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7289417|gb|AE002806.1|AE002806 Drosophila melanogaster genomic scaffold 142000013385651, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       3603 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289767|gb|AE002892.1|AE002892 Drosophila melanogaster genomic scaffold 142000013385959, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       16864 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7288929|gb|AE002919.1|AE002919 Drosophila melanogaster genomic scaffold 142000013385241, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       3000 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289383|gb|AE002935.1|AE002935 Drosophila melanogaster genomic scaffold 142000013385620, complete sequence
 Position  Repeat    Coverage  Repeat 

     5332  TTAT *  5  18/20    TTAT TTAT TTAT TTAA TTTT
-----------------------------------------------------------------------------
 Total sequence length.........................       21261 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       1 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 TTAT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7288949|gb|AE002944.1|AE002944 Drosophila melanogaster genomic scaffold 142000013385261, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       1824 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7288953|gb|AE002952.1|AE002952 Drosophila melanogaster genomic scaffold 142000013385263, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       14708 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289359|gb|AE002960.1|AE002960 Drosophila melanogaster genomic scaffold 142000013385601, complete sequence
 Position  Repeat    Coverage  Repeat 

    10563  ACAG *  5  18/20    ACAG ACAG ACAG ACGG ACGG
-----------------------------------------------------------------------------
 Total sequence length.........................       19947 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       1 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ACAG-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7289183|gb|AE002968.1|AE002968 Drosophila melanogaster genomic scaffold 142000013385462, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       3372 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289437|gb|AE002976.1|AE002976 Drosophila melanogaster genomic scaffold 142000013385668, complete sequence
 Position  Repeat    Coverage  Repeat 

    14894  TGTC *  5  18/20    TGTC TGTC TGTC TGTC CGTA
    15515  TATT *  5  18/20    TATT TTTT CATT TATT TATT
    24406  TTAA *  5  18/20    TTAA TAAA TAAA TTAA TTAA
-----------------------------------------------------------------------------
 Total sequence length.........................       43487 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       3 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 TATT-1    TTAA-1    TGTC-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7289322|gb|AE002980.1|AE002980 Drosophila melanogaster genomic scaffold 142000013385568, complete sequence
 Position  Repeat    Coverage  Repeat 

     1073  TTAT *  5  18/20    TTAT TTAT TTAT TTTT TTTT
    19471  AAAT *  5  18/20    AAAT AAAT AAAA AAAT AATT
-----------------------------------------------------------------------------
 Total sequence length.........................       19750 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       2 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    TTAT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7289200|gb|AE002984.1|AE002984 Drosophila melanogaster genomic scaffold 142000013385479, complete sequence
 Position  Repeat    Coverage  Repeat 

    17691  ATTT *  5  18/20    ATTT ATTT ATTT TTTT TTTT
-----------------------------------------------------------------------------
 Total sequence length.........................       26448 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       1 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATTT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7289372|gb|AE002992.1|AE002992 Drosophila melanogaster genomic scaffold 142000013385609, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       13643 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289348|gb|AE003000.1|AE003000 Drosophila melanogaster genomic scaffold 142000013385592, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       17194 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289338|gb|AE003008.1|AE003008 Drosophila melanogaster genomic scaffold 142000013385583, complete sequence
 Position  Repeat    Coverage  Repeat 

    16752  ATAG *  5  18/20    ATAG ATAT ATAG ATAC ATAG
    24084  ATGC *  5  18/20    ATGC ACGC ATGC ATGC ATGA
-----------------------------------------------------------------------------
 Total sequence length.........................       26058 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       2 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATAG-1    ATGC-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7289553|gb|AE003016.1|AE003016 Drosophila melanogaster genomic scaffold 142000013385767, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       1073 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7288979|gb|AE003024.1|AE003024 Drosophila melanogaster genomic scaffold 142000013385289, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       59055 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289342|gb|AE003032.1|AE003032 Drosophila melanogaster genomic scaffold 142000013385587, complete sequence
 Position  Repeat    Coverage  Repeat 

     9280  ATAA *  5  19/20    ATAA ATAA ATAA ATTA ATAA
    11889  TATT *  5  18/20    TATT TATT TATT AAGT TATT
    12228  ACGG *  5  18/20    ACGG ACGG ACAG ATGG ACGG
    17978  CTTT *  5  18/20    CTTT ATTT CTTT CTTT ATTT
-----------------------------------------------------------------------------
 Total sequence length.........................       29994 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       4 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATAA-1    ACGG-1    TATT-1    CTTT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7289208|gb|AE003035.1|AE003035 Drosophila melanogaster genomic scaffold 142000013385487, complete sequence
 Position  Repeat    Coverage  Repeat 

      532  GTCC *  5  18/20    GTCC ATCT GTCC GTCC GTCC
-----------------------------------------------------------------------------
 Total sequence length.........................       1546 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       1 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 GTCC-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7289130|gb|AE003040.1|AE003040 Drosophila melanogaster genomic scaffold 142000013385414, complete sequence
 Position  Repeat    Coverage  Repeat 

    43629  TTAT *  6  22/24    TTAT TTAT TTAT TTAA TTAT TTAA
-----------------------------------------------------------------------------
 Total sequence length.........................       55603 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       1 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 TTAT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7289411|gb|AE002589.1|AE002589 Drosophila melanogaster genomic scaffold 142000013385645, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       1058 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289416|gb|AE002607.1|AE002607 Drosophila melanogaster genomic scaffold 142000013385650, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       1239 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289156|gb|AE002648.1|AE002648 Drosophila melanogaster genomic scaffold 142000013385436, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       4403 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289408|gb|AE002686.1|AE002686 Drosophila melanogaster genomic scaffold 142000013385643, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       1527 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289468|gb|AE003001.1|AE003001 Drosophila melanogaster genomic scaffold 142000013385692, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       1019 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289446|gb|AE003056.1|AE003056 Drosophila melanogaster genomic scaffold 142000013385676, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       22669 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289145|gb|AE003064.1|AE003064 Drosophila melanogaster genomic scaffold 142000013385425, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       22016 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289388|gb|AE003195.1|AE003195 Drosophila melanogaster genomic scaffold 142000013385624, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       1511 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289263|gb|AE002709.1|AE002709 Drosophila melanogaster genomic scaffold 142000013385535, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       40796 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289785|gb|AE003073.1|AE003073 Drosophila melanogaster genomic scaffold 142000013385973, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       3738 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289275|gb|AE002640.1|AE002640 Drosophila melanogaster genomic scaffold 142000013385546, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       2000 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289053|gb|AE002788.1|AE002788 Drosophila melanogaster genomic scaffold 142000013385347, complete sequence
 Position  Repeat    Coverage  Repeat 

     2736  TATT *  5  18/20    TATT TATG TATT TATT TGTT
-----------------------------------------------------------------------------
 Total sequence length.........................       19182 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       1 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 TATT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7289057|gb|AE003081.1|AE003081 Drosophila melanogaster genomic scaffold 142000013385349, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       12708 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289223|gb|AE003090.1|AE003090 Drosophila melanogaster genomic scaffold 142000013385502, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       38153 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7316105|gb|AE002769.1|AE002769 Drosophila melanogaster genomic scaffold 142000013386052, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       0 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7302256|gb|AE003788.1|AE003788 Drosophila melanogaster genomic scaffold 142000013386052 section 5 of 5, complete sequence
 Position  Repeat    Coverage  Repeat 

    55507  AAGA *  5  19/20    AAGA AAGA AAGA AAGA AATA
    75208  ATTT *  5  18/20    ATTT ATTT ATTT ATTT ATAG
   108680  AAAT *  5  18/20    AAAT AAGT ACAT AAAT AAAT
-----------------------------------------------------------------------------
 Total sequence length.........................       128817 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       3 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AAGA-1    ATTT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7302239|gb|AE003787.1|AE003787 Drosophila melanogaster genomic scaffold 142000013386052 section 4 of 5, complete sequence
 Position  Repeat    Coverage  Repeat 

    26631  TTTA *  5  18/20    TTTA TTTA TTTA TTTT TTTT
    33449  TTAA *  5  18/20    TTAA TAAA TAAA TTAA TTAA
    73968  ACGG *  5  18/20    ACGG ACGG ACAG ACAG ACGG
    77468  CCGT *  5  18/20    CCGT CTGT CTGT CCGT CCGT
   166179  GTCT *  5  18/20    GTCT GTCC ATCT GTCT GTCT
   201236  ACAA *  5  18/20    ACAA ACAA ACAA ACAG AAAA
   265183  ATGT *  5  18/20    ATGT ATGT ATGT ATGT TTTT
-----------------------------------------------------------------------------
 Total sequence length.........................       307228 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       7 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATGT-1    ACAA-1    ACGG-1    TTAA-1    TTTA-1    GTCT-1    CCGT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7302231|gb|AE003786.1|AE003786 Drosophila melanogaster genomic scaffold 142000013386052 section 3 of 5, complete sequence
 Position  Repeat    Coverage  Repeat 

   176644  GTCT *  6  22/24    GTCT TTCT GTCT GTCC GTCT GTCT
   200381  ATTA *  6  23/24    ATTA ATTA ATTA ATTA ATTA ATTT
   203597  TGTA *  5  18/20    TGTA TATA CGTA TGTA TGTA
   246116  AATG *  5  18/20    AATG AATG AATG AATT AATT
   264686  TATT *  5  18/20    TATT TATT TATG TTTT TATT
-----------------------------------------------------------------------------
 Total sequence length.........................       316735 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       5 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AATG-1    ATTA-1    TATT-1    TGTA-1    GTCT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7302205|gb|AE003785.1|AE003785 Drosophila melanogaster genomic scaffold 142000013386052 section 2 of 5, complete sequence
 Position  Repeat    Coverage  Repeat 

    28548  CATT *  6  22/24    CATT CAAG CATT CATT CATT CATT
    32669  CTGG *  7  27/28    CTGG CCGG CTGG CTGG CTGG CTGG CTGG
    46676  TCCG *  6  22/24    TCCG TCCG TGCT TCCG TCCG TCCG
    58210  TATT *  6  22/24    TATT TATT TATT TATT TATT AATA
    79321  ATTA *  5  18/20    ATTA ATTA ATTA ATTA AAGA
    80826  TAAA *  5  18/20    TAAA TAAA AAAG TAAA TAAA
    84699  TTGT *  6  22/24    TTGT TTCT TTTT TTGT TTGT TTGT
    92319  TATC * 10  38/40    TATC TATC TATA TATC TATC TATC TATC TATC TATC TATA
   138869  ATCT *  5  18/20    ATCT ATCT ATCA ATTT ATCT
   141741  AATA *  5  18/20    AATA AATA AATA AATA ATAA
   141787  TATT *  6  22/24    TATT TTTT TATT TACT TATT TATT
   143344  ACAT *  5  18/20    ACAT ATGT ACAT ACAT ACAT
   163573  CCGT *  5  19/20    CCGT CTGT CCGT CCGT CCGT
   171807  AATA *  5  18/20    AATA AATA AATT AATA AATT
   174460  ATCA *  5  18/20    ATCA ATCA ATCA ATCA ATTG
   194934  CATA *  5  18/20    CATA CATA CATA TGTA CATA
   199833  AATC *  5  19/20    AATC AATC AATA AATC AATC
   211953  TCTG *  5  18/20    TCTG TCCG TCCG TCTG TCTG
   231292  TGTA *  5  19/20    TGTA TGTA TGTA TGTA TGCA
   253628  TCCG * 10  36/40    TCCG TCCG TCCG TCCG TCCG TCCG CCCG CCCG GCCG TCAG
   262637  CTGG *  6  22/24    CTGG CTGG CTGA CTGG CTGA CTGG
   278883  ATAC *  5  18/20    ATAC AAAC ATAC ATAC ATAG
-----------------------------------------------------------------------------
 Total sequence length.........................       296279 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       22 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AATA-2    AATC-1    ATAC-1    ATTA-1    ATCA-1    ATCT-1    ACAT-1    TAAA-1    
 TATT-2    TATC-1    TTGT-1    TGTA-1    TCTG-1    TCCG-2    CATA-1    CATT-1    
 CTGG-2    CCGT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7302167|gb|AE003784.1|AE003784 Drosophila melanogaster genomic scaffold 142000013386052 section 1 of 5, complete sequence
 Position  Repeat    Coverage  Repeat 

    84392  TATG *  8  31/32    TATG TATG TATA TATG TATG TATG TATG TATG
    98935  TGTA *  6  22/24    TGTA TGTA AATA TGTA TGTA TGTA
    99330  ACAT *  5  19/20    ACAT ACAT ACAT ACAT ATAT
   106540  TATG *  5  18/20    TATG TATG TATT TATA TATG
   108770  ATAC *  6  22/24    ATAC ATAA ATAC ATAC ATAC ATAT
   111049  TACA *  6  22/24    TACA TGCA TACA TGCA TACA TACA
   112012  GTCA *  5  18/20    GTCA GACA GTCA GACA GTCA
   117521  TGTA *  5  18/20    TGTA TGTA CATA TGTA TGTA
   140212  CTTT *  5  18/20    CTTT CTGT CTTT CTCT CTTT
   154640  CATA *  5  18/20    CATA CATA TAAA CATA CATA
   188501  TACA *  5  18/20    TACA TACA TATA TATA TACA
   305909  AATA *  5  19/20    AATA AATA AATA AATA AAAA
-----------------------------------------------------------------------------
 Total sequence length.........................       313072 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       12 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AATA-1    ATAC-1    ACAT-1    TATG-2    TACA-2    TGTA-2    GTCA-1    CATA-1    
 CTTT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7289017|gb|AE003098.1|AE003098 Drosophila melanogaster genomic scaffold 142000013385318, complete sequence
 Position  Repeat    Coverage  Repeat 

      651  TATT *  5  18/20    TATT TATT TATT TGTA TATT
-----------------------------------------------------------------------------
 Total sequence length.........................       24781 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       1 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 TATT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7316098|gb|AE002778.1|AE002778 Drosophila melanogaster genomic scaffold 142000013386042, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       0 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7302304|gb|AE003790.1|AE003790 Drosophila melanogaster genomic scaffold 142000013386042 section 2 of 2, complete sequence
 Position  Repeat    Coverage  Repeat 

     9161  TAAA *  5  18/20    TAAA TAAA TAAA TATA AAAA
    30549  TCCA *  6  22/24    TCCA TCCA TGCA TCCA TCCA TCAA
    46332  AACG *  5  19/20    AACG AACG AACA AACG AACG
    58306  TTGT *  5  18/20    TTGT TTGT TTGT TTGT TGCT
   111995  TACA *  5  18/20    TACA TACA TACA TATG TACA
   122929  CACT *  5  18/20    CACT CACT CACT CACT TAGT
   149953  TTTA *  5  18/20    TTTA TTTA TTTA TTTT TTTT
   189252  CCAT *  9  33/36    CCAT CCAT CCAG CCAT CAAT CCAT CCAT CCAT ACAT
-----------------------------------------------------------------------------
 Total sequence length.........................       210451 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       8 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AACG-1    TAAA-1    TACA-1    TTTA-1    TTGT-1    TCCA-1    CACT-1    CCAT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7302263|gb|AE003789.1|AE003789 Drosophila melanogaster genomic scaffold 142000013386042 section 1 of 2, complete sequence
 Position  Repeat    Coverage  Repeat 

    40261  TAAT *  6  23/24    TAAT TAAT TAAT TAAT TAAT TTAT
    58872  CCAT *  8  29/32    CCAT CCAT CCAT CCAT CCAT CCAT CCGT CCGA
    62818  TCAT *  6  22/24    TCAT TCAT TCAT TCAC TCAC TCAT
    64199  TGAG *  5  18/20    TGAG TGAG TTAG TGAC TGAG
    72371  TGTC *  5  19/20    TGTC TGTC TGTC TGTC TGCC
   104911  GAGT *  5  18/20    GAGT GAGT GAAT GAGT GACT
   191214  TATT *  5  18/20    TATT TATT TATT GGTT TATT
   235000  ACAT *  5  18/20    ACAT ACAT ACAT ATGT ACAT
   257760  GTGA *  5  19/20    GTGA GTGA GTCA GTGA GTGA
-----------------------------------------------------------------------------
 Total sequence length.........................       298904 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       9 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ACAT-1    TAAT-1    TATT-1    TGAG-1    TGTC-1    TCAT-1    GAGT-1    GTGA-1    
 CCAT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7316102|gb|AE002787.1|AE002787 Drosophila melanogaster genomic scaffold 142000013386047, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       0 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7304243|gb|AE003842.1|AE003842 Drosophila melanogaster genomic scaffold 142000013386047 section 52 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

       95  TATG *  6  22/24    TATG TATG TATG TACA TATG TATG
    59060  ATCT *  6  22/24    ATCT AACT ATCT ATCT ATCT ACCT
    65104  AGTT *  6  23/24    AGTT AGTT AGTT AGTT AGTC AGTT
    79626  GACG *  5  18/20    GACG GACA GACG GACG GACA
    79651  ACGG *  5  18/20    ACGG ACGG ATGG ACGG ATGG
    82960  CTCG *  5  18/20    CTCG CTCT CTCG CTCT CTCG
    89973  GTAT *  5  18/20    GTAT ATAT GTAT GTAT GTAG
   106776  AAAG *  5  18/20    AAAG AAAG AAAG AAAG GAAC
   108854  AAAT *  5  18/20    AAAT AAAT AAAT AAAT ACAC
   120362  ATGT *  6  23/24    ATGT ATGT ATGT ATGT ATGT ATGC
   158332  GTCT *  5  18/20    GTCT GTCT GACT GTCT GTCC
   205340  ACGG *  5  18/20    ACGG ACGG ACAA ACGG ACGG
   207322  GACA *  5  18/20    GACA GAAA GACA GACG GACA
   230556  TTTA *  5  19/20    TTTA TTTA TTTA TTTA TGTA
   234039  GTCC *  5  18/20    GTCC GTCC GTCT GTCC GTCG
   247829  GTGA *  5  18/20    GTGA GTGA GTGA GTGA GGAA
-----------------------------------------------------------------------------
 Total sequence length.........................       252413 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       16 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AAAG-1    ATGT-1    ATCT-1    AGTT-1    ACGG-2    TATG-1    TTTA-1    
 GACA-1    GACG-1    GTAT-1    GTGA-1    GTCT-1    GTCC-1    CTCG-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7304203|gb|AE003841.1|AE003841 Drosophila melanogaster genomic scaffold 142000013386047 section 51 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    34146  AAAC *  5  18/20    AAAC AAAG AAAC AAAC AAAA
    34467  CCAT *  6  23/24    CCAT CCAT CCAT CCAT CCAT CCAC
    36851  CATA *  6  23/24    CATA CATA CATA CATA CATA AATA
    37153  TACA *  5  18/20    TACA TACA TACA TACA TAGT
    45034  TACT *  5  18/20    TACT TACT TACT TACT TGAT
    81759  AAAT *  5  19/20    AAAT AAAT AAAT AAAT AAAA
    85681  AAAC *  5  18/20    AAAC AAAC AAAC AAAC AAGA
   138255  GACA *  5  18/20    GACA AACA GACA GACA GAAA
   150027  CATT *  5  18/20    CATT CCAT CATT CATT CATT
   206504  AATC *  5  18/20    AATC AATC CATC AATC AATA
   207943  GGAT *  5  18/20    GGAT GGAT CGAT CGAT GGAT
   210325  CGTC *  5  18/20    CGTC CGTC CTTC CGTC TGTC
   233814  TATG *  5  19/20    TATG TATG TATG TATG TATT
-----------------------------------------------------------------------------
 Total sequence length.........................       262082 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       13 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AAAC-2    AATC-1    TATG-1    TACA-1    TACT-1    GACA-1    GGAT-1    
 CATA-1    CATT-1    CGTC-1    CCAT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7304160|gb|AE003840.1|AE003840 Drosophila melanogaster genomic scaffold 142000013386047 section 50 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

      143  TGTA *  5  18/20    TGTA GATA TGTA TGTA TGTA
     4170  TATG *  6  22/24    TATG TATG TATG TATA TATG TATA
    22919  ACCG *  6  22/24    ACCG ACCG ACCG ACCG ACCT GCCG
    32740  GATA *  5  18/20    GATA CACA GATA GATA GATA
    38603  TACA *  5  18/20    TACA TATG TACA TACA TACA
    39027  AAAT *  6  23/24    AAAT AAAT AAAT AAAT AAAT AAAA
    63025  ATAC *  5  18/20    ATAC ATAC ATAC ATAT ACAC
    83876  TAAA *  5  18/20    TAAA TAAA ATAA TAAA TAAA
    87372  ATAC *  5  18/20    ATAC ATAC ATAC ATAT ATAT
   100830  ACAT * 11  41/44    ACAT ACAT ACAT ACAT ACAT ACAT ACAT ACAT ACAT ATAT GCTT
   143869  GGAC *  6  22/24    GGAC GGAC GGAC GGAC GGAC AGAA
   144731  CTCA *  5  19/20    CTCA CTCA CTCA CACA CTCA
   152915  CCGA *  7  27/28    CCGA CCGA CCGA CCGA CCGA CCGA CCGT
   154042  CTGA *  5  18/20    CTGA GTGA CTGA CTAA CTGA
   155668  TGGA *  5  18/20    TGGA TAGA TGGA TAGA TGGA
   156738  TACA *  5  18/20    TACA TATA TACA TACA TATA
   190090  CTAT *  6  23/24    CTAT CTAT CTAT CTAT CTAT CAAT
   226159  GTCA *  5  18/20    GTCA CTCA GTTA GTCA GTCA
   244615  AAAT *  5  18/20    AAAT GAAT AAAT AAAT AATT
-----------------------------------------------------------------------------
 Total sequence length.........................       259764 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       19 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-2    ATAC-2    ACAT-1    ACCG-1    TAAA-1    TATG-1    TACA-2    TGTA-1    
 TGGA-1    GATA-1    GTCA-1    GGAC-1    CTAT-1    CTGA-1    CTCA-1    CCGA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7304109|gb|AE003839.1|AE003839 Drosophila melanogaster genomic scaffold 142000013386047 section 49 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

     6004  CCAG *  5  18/20    CCAG CCAT CCAA CCAG CCAG
     6939  GATG *  8  30/32    GATG CTTG GATG GATG GATG GATG GATG GATG
    16057  GTGA *  7  26/28    GTGA GTGA CTGA GTGA GTGA GTGA GTGG
    16446  ATGT *  6  22/24    ATGT ATGT ATGA ATAT ATGT ATGT
    34843  ATAC *  5  18/20    ATAC ACAC ATAC ATAC GTAC
    43757  CCAT *  5  19/20    CCAT CCAT CCAT CGAT CCAT
    80912  AAAT *  5  18/20    AAAT AAAT ACAA AAAT AAAT
    84284  TATG *  5  18/20    TATG TATG TATG TATG TACA
   152623  GTTG *  5  18/20    GTTG GTTG GTTA GTTG GCTG
   181253  CTGT *  5  18/20    CTGT CTGT CTGT CTGC TTGT
   187823  ACAG *  5  18/20    ACAG ACAG ACAG ACAG ATGG
   251593  TATG *  5  18/20    TATG TATG TATG TACG TTTG
   255376  ACTG *  5  18/20    ACTG ACTG ACTG GCTG GCTG
   255397  CTGA *  6  23/24    CTGA CTGA CTGA CTGA CTAA CTGA
-----------------------------------------------------------------------------
 Total sequence length.........................       261850 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       14 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    ATAC-1    ATGT-1    ACAG-1    ACTG-1    TATG-2    GATG-1    GTTG-1    
 GTGA-1    CTGA-1    CTGT-1    CCAT-1    CCAG-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7304068|gb|AE003838.1|AE003838 Drosophila melanogaster genomic scaffold 142000013386047 section 48 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    54681  TTCA *  6  23/24    TTCA TTCA TTCA TTCA TTGA TTCA
    56031  TATT *  5  19/20    TATT TATT TATT TATT TAAT
    65922  CAAA *  5  18/20    CAAA CAAA CAAT CAAA CCAA
    67840  ACAT *  5  20/20    ACAT ACAT ACAT ACAT ACAT
    71729  TTCC *  5  18/20    TTCC TTCC TTCC TACC ATCC
   109401  AGGA *  5  19/20    AGGA CGGA AGGA AGGA AGGA
   110856  AGAT *  7  28/28    AGAT AGAT AGAT AGAT AGAT AGAT AGAT
   132549  CAGA *  6  22/24    CAGA CAGA CAGA CAGA CAGA CAAT
   161459  TACA *  5  18/20    TACA TACA TACA TACG TATA
   162833  TGTT *  5  20/20    TGTT TGTT TGTT TGTT TGTT
   169793  TCAA *  6  22/24    TCAA TCAA TCAA TCGA TCAA TCGA
   202355  CTTC *  5  19/20    CTTC CTTC CTTC CTTC CTTA
   214907  GCTG *  5  18/20    GCTG ACTG CCTG GCTG GCTG
   232191  ATCT *  5  19/20    ATCT ATCG ATCT ATCT ATCT
   257592  CTGG *  5  18/20    CTGG CTAG CTGG ATGG CTGG
   262140  TCCA * 10  36/40    TCCA TCCC TCCA TCAA TCCA TCCA TCCA TACA TCCA CCCA
   263193  CAGT *  5  18/20    CAGT CAAT CAGT CAAT CAGT
-----------------------------------------------------------------------------
 Total sequence length.........................       263411 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       17 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATCT-1    AGAT-1    AGGA-1    ACAT-1    TATT-1    TACA-1    TTCA-1    TTCC-1    
 TGTT-1    TCAA-1    TCCA-1    GCTG-1    CAAA-1    CAGA-1    CAGT-1    CTTC-1    
 CTGG-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7304040|gb|AE003837.1|AE003837 Drosophila melanogaster genomic scaffold 142000013386047 section 47 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    24529  TAAA *  5  18/20    TAAA TAAA TAGA TAAA AAAA
    48024  CAAC *  5  18/20    CAAC CACC CAAC CACC CAAC
    97950  ATAC *  5  18/20    ATAC ATAC ATAC ATAC ATCG
   110876  TTTG *  5  18/20    TTTG TTTG GTTG TTTG TCTG
   126136  TTTA *  5  18/20    TTTA TTTA TTTA TTTA TTAT
   165375  CCCA *  5  18/20    CCCA ACCA CCCA ACCA CCCA
   167229  CCAC *  5  18/20    CCAC CCAC CCAC ACAC ACAC
   200093  AGTA *  5  19/20    AGTA AGTA AGTT AGTA AGTA
   233442  TTTA *  5  18/20    TTTA TTTT TTTT TTTA TTTA
-----------------------------------------------------------------------------
 Total sequence length.........................       234905 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       9 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATAC-1    AGTA-1    TAAA-1    TTTA-2    TTTG-1    CAAC-1    CCAC-1    CCCA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7304001|gb|AE003836.1|AE003836 Drosophila melanogaster genomic scaffold 142000013386047 section 46 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

     5688  AACC *  5  18/20    AACC ACCC AACC ATCC AACC
    22859  GTCT *  5  18/20    GTCT GTCT GTCT GTGT GTGT
    55162  GATC *  6  23/24    GATC GGTC GATC GATC GATC GATC
    55823  TGGC *  8  29/32    TGGC TTGC TGGC TGGC TGAC TGGC TGGC TGTC
    90392  TCCG *  5  18/20    TCCG TCCA TCAG TCCG TCCG
   125978  ATGT *  5  18/20    ATGT ATGT ACAT ATGT ATGT
   131788  CATA *  5  18/20    CATA CACA TATA CATA CATA
   140403  GTCC *  5  18/20    GTCC GTCC GCCA GTCC GTCC
   156351  GACA *  5  18/20    GACA GACC GACA TACA GACA
   192075  TGGC *  5  18/20    TGGC TGGC TGGC TGGT TGGT
   193203  CGAT *  5  19/20    CGAT CGAT CGAT CGAT CTAT
   194147  ATAC *  5  18/20    ATAC ATAC ATAC ATAT ATGC
-----------------------------------------------------------------------------
 Total sequence length.........................       253189 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       12 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AACC-1    ATAC-1    ATGT-1    TGGC-2    TCCG-1    GATC-1    GACA-1    GTCT-1    
 GTCC-1    CATA-1    CGAT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7303956|gb|AE003835.1|AE003835 Drosophila melanogaster genomic scaffold 142000013386047 section 45 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

     7832  CCAT *  5  18/20    CCAT CCAT CCAT CTAT CTAT
     7852  CTAT *  5  18/20    CTAT GTAT CTAT CTAT CTTT
    19299  CATC *  7  27/28    CATC CATC CGTC CATC CATC CATC CATC
    22198  TGAT *  5  18/20    TGAT TGAT TGAT CGAT TTAT
    66689  AAAT *  5  18/20    AAAT AAAT AACT AAAT AAAA
   101278  ATCG *  5  18/20    ATCG CTCG ATAG ATCG ATCG
   221329  AAAT *  5  18/20    AAAT AAAA CAAT AAAT AAAT
   226208  TTAT *  5  18/20    TTAT TTAT TTAC TTAT TTGT
   231532  CCGT *  5  18/20    CCGT CCGT CCAT TCGT CCGT
-----------------------------------------------------------------------------
 Total sequence length.........................       259860 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       9 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-2    ATCG-1    TTAT-1    TGAT-1    CATC-1    CTAT-1    CCAT-1    CCGT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7303908|gb|AE003834.1|AE003834 Drosophila melanogaster genomic scaffold 142000013386047 section 44 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    13499  GTAT *  5  18/20    GTAT ATAT GTAT ATAT GTAT
    16367  CCAG *  6  22/24    CCAG CCAG CCAG CCAG CCAG CCGA
    84057  ACTC *  5  18/20    ACTC ACTC ACAC ACTC ACTG
   110427  ACAT *  6  22/24    ACAT ACAT ACAT ACAT ACAA ATAT
   131062  CATA *  5  20/20    CATA CATA CATA CATA CATA
   178410  GACC *  8  29/32    GACC GACC GACC GACC GACC GACC GACC AGCT
   214209  AATA *  5  18/20    AATA AATA AATT AATA ATTA
   245141  TATC *  5  18/20    TATC AATC TATC TATC TATT
   247760  TGGT *  5  18/20    TGGT TGGT TGGC TGGT TGGC
   247780  TGGC *  9  34/36    TGGC TGGC TGGC TGGC TGGC TGGC TGGC TAGC TGAC
-----------------------------------------------------------------------------
 Total sequence length.........................       257324 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       10 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AATA-1    ACAT-1    ACTC-1    TATC-1    TGGT-1    TGGC-1    GACC-1    GTAT-1    
 CATA-1    CCAG-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7303875|gb|AE003833.1|AE003833 Drosophila melanogaster genomic scaffold 142000013386047 section 43 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

     8300  CGTG *  5  18/20    CGTG TGTG CGTG CGTG TGTG
    33779  GCGA *  5  18/20    GCGA GCGA GCGA GACA GCGA
    40413  TATG *  5  18/20    TATG TACG TATG TATG TCTG
    43976  TACA *  5  19/20    TACA TACG TACA TACA TACA
    44323  TGTA *  5  18/20    TGTA TATA TGTA TGTA TGTG
    54460  TGGT *  6  23/24    TGGT TGGT TGGT TGGT TGGT TGGG
    54897  GACT *  8  29/32    GACT GACT GACT GACT GAAT GTCT GACT GATT
    56129  TTGA *  5  18/20    TTGA TTGA TTGA TTGC TTGG
    64189  TGAC *  5  18/20    TGAC TGAC TGAC TGAC TGGT
    64218  TTGG *  5  18/20    TTGG TTGG TTGG TTGG TTTT
    79145  TTGA *  5  19/20    TTGA TTGA TTAA TTGA TTGA
    85773  AAAT *  5  20/20    AAAT AAAT AAAT AAAT AAAT
    85806  CGAT *  5  20/20    CGAT CGAT CGAT CGAT CGAT
    87742  TCAG *  7  26/28    TCAG TCAG TCAG TCAG CCAG TCAG GCAG
   109893  GATG *  5  18/20    GATG GATA TATG GATG GATG
   133568  TATG *  5  19/20    TATG TATG TTTG TATG TATG
   145307  TTGC *  5  18/20    TTGC TTGC TTGC TTGC TGGG
   164955  TTTA *  5  18/20    TTTA TTTA TTTA TTTT TTTT
   165704  GTAC *  5  18/20    GTAC GTAC GTAT GTAC ATAC
   192631  TATC *  5  19/20    TATC TATC TATC TAGC TATC
   197311  CATC *  5  18/20    CATC CATC CATC CAGC CATT
   207768  GGTG *  5  18/20    GGTG GGTT GGTG GGTC GGTG
   216992  ATAC *  5  18/20    ATAC GTAC ATAC ATAC ATAT
   241217  ACCC *  5  18/20    ACCC ACCC ACCC ACTC ACTC
   245035  CAAA *  5  18/20    CAAA CAAA CAAA AAAA CAAT
   249076  TGAC *  5  19/20    TGAC TGAC TAAC TGAC TGAC
   262075  TAAC *  5  18/20    TAAC TGAC TAAC TGAC TAAC
   262392  CAGA *  5  18/20    CAGA CAGT CAGA CAGA CAGG
-----------------------------------------------------------------------------
 Total sequence length.........................       265562 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       28 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    ATAC-1    ACCC-1    TAAC-1    TATG-2    TATC-1    TACA-1    TTTA-1    
 TTGA-2    TTGG-1    TTGC-1    TGAC-2    TGTA-1    TGGT-1    TCAG-1    GATG-1    
 GACT-1    GTAC-1    GGTG-1    GCGA-1    CAAA-1    CATC-1    CAGA-1    CGAT-1    
 CGTG-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7303842|gb|AE003832.1|AE003832 Drosophila melanogaster genomic scaffold 142000013386047 section 42 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    62519  AGAC *  5  18/20    AGAC AGAC AGAC AGAC AGGA
    67950  ACAG *  5  18/20    ACAG AACG ACAG ACAG ACAG
    88407  TTTA *  5  18/20    TTTA TTTA TTTA TTTT TTTT
    95486  CAAA *  5  18/20    CAAA CAAA CAAA CAAA CACC
    97720  CATA *  5  18/20    CATA CATA CATA CATA TGTA
   122973  CACT *  5  18/20    CACT CACT CGCT CACT CAGT
   137318  ATGT *  5  20/20    ATGT ATGT ATGT ATGT ATGT
   189671  TATG *  5  18/20    TATG TATG TATG TACG TGTG
   191176  CCAA *  5  19/20    CCAA CCAA CCAA CTAA CCAA
   193108  ACCT *  5  19/20    ACCT ACCT ACCT TCCT ACCT
   223632  TGTT *  6  23/24    TGTT TGTT TGTT TGTT TGTT TGCT
   231198  CCAC *  6  23/24    CCAC CCAC CCAT CCAC CCAC CCAC
   237576  ATAA *  5  18/20    ATAA ATAA AGAA ATAT ATAA
-----------------------------------------------------------------------------
 Total sequence length.........................       261713 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       13 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATAA-1    ATGT-1    AGAC-1    ACAG-1    ACCT-1    TATG-1    TTTA-1    TGTT-1    
 CAAA-1    CATA-1    CACT-1    CCAA-1    CCAC-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7303794|gb|AE003831.1|AE003831 Drosophila melanogaster genomic scaffold 142000013386047 section 41 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    60005  TTAT *  5  18/20    TTAT CTAT TTAT ATAT TTAT
    60976  ATTT *  5  18/20    ATTT ATTT ATTT AATA ATTT
    62854  TATG *  5  18/20    TATG TATG TATG TACA TATG
    97154  TACA *  5  18/20    TACA AACA TACA TACA TACT
   106464  CATT *  5  18/20    CATT CATT TATT CACT CATT
   112350  CAAC *  6  22/24    CAAC CAAC CAAC AAAA CAAC CAAC
   135413  GGAT *  5  18/20    GGAT GAAC GGAT GGAT GGAT
   151954  ATGT *  5  18/20    ATGT GTGT ATGT ATGT ATTT
   155161  TGGA *  9  33/36    TGGA TGGA TGGA TGGA TGGA TGGA CGGA CGGT TGGA
   157211  AATA *  5  18/20    AATA AATA AATA AATA ACAA
   163210  TTTA *  5  19/20    TTTA TATA TTTA TTTA TTTA
   168996  ATGT *  5  18/20    ATGT ATGT ATGT ATCT ATAT
   180722  CCGA *  5  19/20    CCGA CCGA CCGA CCAA CCGA
   180745  ACTG *  5  18/20    ACTG ACTG ATTG ACTG GCTG
   180765  GCTG *  5  18/20    GCTG GCTG GCTG GCTG ATTG
   183595  TCCT *  6  22/24    TCCT TCCT ACCT TCCT GCCT TCCT
   231923  TATT *  5  18/20    TATT TATT TATT TGTT GATT
   238063  GTAT *  5  18/20    GTAT GTAT GTAC ATAT GTAT
   252267  TTGT *  5  19/20    TTGT TTGT TTGT TTGT TTTT
-----------------------------------------------------------------------------
 Total sequence length.........................       260916 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       19 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AATA-1    ATTT-1    ATGT-2    ACTG-1    TATT-1    TATG-1    TACA-1    TTAT-1    
 TTTA-1    TTGT-1    TGGA-1    TCCT-1    GTAT-1    GGAT-1    GCTG-1    CAAC-1    
 CATT-1    CCGA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7303755|gb|AE003830.1|AE003830 Drosophila melanogaster genomic scaffold 142000013386047 section 40 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    30887  AGAC *  6  22/24    AGAC AGAC GGAC AGAC GGAC AGAC
   148808  AGTC *  8  29/32    AGTC AGTC AGTC AGTC AGTC AGCC AGTT GGTC
   153146  ATGT *  5  18/20    ATGT ATGT ATGT ATGT ACAT
   154233  AGTT *  5  18/20    AGTT AGTT ACTA AGTT AGTT
   154458  CTCC *  5  18/20    CTCC CTCC CTCC CTCG CTCG
   157574  TGTA *  6  22/24    TGTA TGTA TGTA TGTA TGTG TGTG
   243930  TTTA *  5  18/20    TTTA TTCA TATA TTTA TTTA
-----------------------------------------------------------------------------
 Total sequence length.........................       261895 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       7 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATGT-1    AGAC-1    AGTT-1    AGTC-1    TTTA-1    TGTA-1    CTCC-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7303717|gb|AE003829.1|AE003829 Drosophila melanogaster genomic scaffold 142000013386047 section 39 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    28401  TATG *  5  20/20    TATG TATG TATG TATG TATG
    31246  CAGC *  7  26/28    CAGC CAGC CAGC CAGC CAGC CAGC CAAG
    43651  TATG *  5  18/20    TATG TATA TATG TATG TATC
    47972  GTCA *  5  18/20    GTCA GTCC GTCA GTCA GTTA
    62475  AAGA *  5  18/20    AAGA AAGA ATGA AAGA AAAA
    63008  GTGG *  5  18/20    GTGG GTGG TTGG GTGG GTGA
    76166  ATGT * 11  40/44    ATGT ATGT ATGT ATGT ATGT ATGT ATGT ATGT TTGC ATGT TTGC
    76225  TATG *  6  22/24    TATG AATG TATG TATG CATG TATG
   123047  CAAA *  5  18/20    CAAA CAAA CAAA TAAA CTAA
   125104  CAGT *  7  27/28    CAGT CAGC CAGT CAGT CAGT CAGT CAGT
   127127  CAAA *  5  18/20    CAAA CAAA CAAA AAAA AAAA
   128903  AGAA *  5  18/20    AGAA AAAA AGAA AGAA AAAA
   130231  TATC * 13  47/52    TATC TATC TAGC TATC TATA TATC TATC TGTC TATC TATC TATC TATC TGCC
   154283  TATG *  5  19/20    TATG TATG TATG TATG TAGG
   167327  GGTT *  5  19/20    GGTT GGTT TGTT GGTT GGTT
   201192  ATAC *  5  18/20    ATAC ATAC AAAC ATAC ATAT
   213607  TGTA *  5  19/20    TGTA TGTA TGTG TGTA TGTA
   215906  TGTT * 10  37/40    TGTT TGTT TGCT TGTT TGTT TGTT TGTT TGTT TGTT GGTC
   226577  GTGA *  6  22/24    GTGA GTGA GTGA GTGA GTGA GGAA
   255421  CAAA *  5  19/20    CAAA CAAA CAAA GAAA CAAA
-----------------------------------------------------------------------------
 Total sequence length.........................       258492 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       20 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAGA-1    ATAC-1    ATGT-1    AGAA-1    TATG-4    TATC-1    TGTA-1    TGTT-1    
 GTGA-1    GTGG-1    GTCA-1    GGTT-1    CAAA-3    CAGT-1    CAGC-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7303677|gb|AE003828.1|AE003828 Drosophila melanogaster genomic scaffold 142000013386047 section 38 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    16435  TATC *  6  22/24    TATC TATC TATC TATC TATT TATT
    35230  GAGT *  5  18/20    GAGT GAGT GAGT GAGT AAGA
    64195  CAAC *  5  18/20    CAAC CAGC GAAC CAAC CAAC
   117793  TTTA *  5  18/20    TTTA TTTA ATTA TATA TTTA
   128447  TTTA *  5  18/20    TTTA ATTA TTTA TTTA TTTG
   129772  TGAA *  5  19/20    TGAA TGAA TGAA TGAA TAAA
   147779  CTGG *  5  18/20    CTGG CTAG CTGA CTGG CTGG
   152496  GGTC *  5  18/20    GGTC GGTC GGTT GGTC GGGC
   172162  CAGT *  5  18/20    CAGT CATC CAGT CAGT CAGT
   178435  TATG *  5  18/20    TATG TACG TATG TATT TATG
   217983  TGGC *  5  20/20    TGGC TGGC TGGC TGGC TGGC
   234150  ATAC *  6  23/24    ATAC ATAC ACAC ATAC ATAC ATAC
   244366  CCAT *  5  19/20    CCAT CCAT CCAT CCAT CCTT
-----------------------------------------------------------------------------
 Total sequence length.........................       259920 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       13 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATAC-1    TATG-1    TATC-1    TTTA-2    TGAA-1    TGGC-1    GAGT-1    GGTC-1    
 CAAC-1    CAGT-1    CTGG-1    CCAT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7303662|gb|AE003827.1|AE003827 Drosophila melanogaster genomic scaffold 142000013386047 section 37 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    12235  AAAT *  6  24/24    AAAT AAAT AAAT AAAT AAAT AAAT
    31092  TATG *  5  18/20    TATG TACA TATG TATG TATG
    61833  TGGC * 13  48/52    TGGC TGAC TGGC TGGC TGGC TGGC TGGC TGGC TGGC TGGC TGGC AGCC TGGT
    76735  ATAC *  5  18/20    ATAC ATAC ATAC ATAC AAAA
    78489  CATA *  5  18/20    CATA CATA CATA CATA TACA
    80680  CAGT *  6  22/24    CAGT CATT CAGT CACT CAGT CAGT
    85426  TTTA *  5  18/20    TTTA TTTA TTTA TTTA TGTT
    94528  ATTT *  5  19/20    ATTT ATTT ATTT ATTT CTTT
    96537  CTGG *  9  34/36    CTGG TTGG CTGG TTGG CTGG CTGG CTGG CTGG CTGG
   100261  ACAG *  5  18/20    ACAG AAAG ACAG ACAG ACGG
   100567  ATCT * 13  48/52    ATCT ATCC ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT GGCT AGCT ATCT
   104198  AGAT *  5  18/20    AGAT AGAT AGAT AGAG AGAG
   105445  CATT *  5  18/20    CATT CATT CAGC CATT CATT
   108769  GCCA *  5  18/20    GCCA GTCA GCCA GGCA GCCA
   114688  GACT *  5  18/20    GACT AACT GACT GGCT GACT
   117948  ATAA *  6  23/24    ATAA ATAA ATAA ATAA ATAA ATAG
   125401  GTGG *  5  18/20    GTGG TTGG GTGG TTGG GTGG
   129800  ACTG *  8  30/32    ACTG ACTA ACTG ACTG ACTG ACTG GCTG ACTG
   137690  TGGC *  5  18/20    TGGC TTGC TGAC TGGC TGGC
   140110  GGAC *  5  18/20    GGAC GAAC GGAC GGAC GGAT
   142784  CAGT *  7  27/28    CAGT CAGT CAGT CAGT CAGT CAGT CACT
   145948  GGCA *  7  27/28    GGCA GGCA GGCA GGCA GGCT GGCA GGCA
   157249  CTGT *  6  22/24    CTGT CTGT CTGT CTGT CCGT CCGT
   161777  ACAT *  5  18/20    ACAT ACAT ACAT ACAT ATAC
   166936  AAAC *  6  22/24    AAAC AAAC AAAC AAAC TGAC AAAC
   194904  ACAT *  5  18/20    ACAT ATAT ACAT ACAT ATAT
   201233  TGGC *  5  18/20    TGGC TGCC TGGC TGCC TGGC
   239631  TGTA *  5  18/20    TGTA CGTA TGTA TGTA TGTG
   249342  TACA *  5  18/20    TACA TACA TACA TACT TATA
   254878  TGGA *  6  22/24    TGGA CGGA TGGA TGGA TGGA AGGA
   255107  TTCT *  5  18/20    TTCT TTCA TTCT TTAT TTCT
   260306  TACA *  5  18/20    TACA TATA TACA TACA TATA
-----------------------------------------------------------------------------
 Total sequence length.........................       261694 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       32 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AAAC-1    ATAA-1    ATAC-1    ATTT-1    ATCT-1    AGAT-1    ACAT-2    
 ACAG-1    ACTG-1    TATG-1    TACA-2    TTTA-1    TTCT-1    TGTA-1    TGGA-1    
 TGGC-3    GACT-1    GTGG-1    GGAC-1    GGCA-1    GCCA-1    CATA-1    CATT-1    
 CAGT-2    CTGT-1    CTGG-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7303588|gb|AE003826.1|AE003826 Drosophila melanogaster genomic scaffold 142000013386047 section 36 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    28640  ATAG *  5  18/20    ATAG ATAG ATAG ATAG ATTA
    88014  GTCG *  9  33/36    GTCG GTCG GTCG GTCG GTCG GTCG GTCG GTCG GCGA
   102952  TACA *  5  18/20    TACA TACA TACA TGCA TATA
   103409  GTAT *  5  18/20    GTAT GTGT GTAT GTTT GTAT
   104906  TACA *  5  18/20    TACA GACA TACA TACA TATA
   105285  TATG *  6  22/24    TATG TATG CATG TATG TATG TATT
   137426  ATGG *  5  19/20    ATGG ATGG ATGG ATGG ATAG
   138417  AATG *  5  18/20    AATG AATG AATC AATG AATT
   172624  CACT *  5  18/20    CACT CACT CACT CGCT CACG
   207570  ATAG *  8  29/32    ATAG TCAG ATAG ATAG ATAG ATAG ATAG CTAG
   260092  TAAA *  6  22/24    TAAA TAAA TAAA TATA TAAA AAAA
   261184  AAAT *  5  18/20    AAAT AAAT AAAT AAAA AAAA
   262872  GTCA *  5  18/20    GTCA GTCT GTCA GTCC GTCA
   271815  CATA *  6  22/24    CATA CATA CATA CATA CATA GGTA
   288649  CACT *  5  18/20    CACT CACT CACT CACA CACA
-----------------------------------------------------------------------------
 Total sequence length.........................       291089 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       15 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AATG-1    ATAG-2    ATGG-1    TAAA-1    TATG-1    TACA-2    GTAT-1    
 GTCA-1    GTCG-1    CATA-1    CACT-2    
----------------------------------------------------------------------------


Genomic sequence...
gi|7303570|gb|AE003825.1|AE003825 Drosophila melanogaster genomic scaffold 142000013386047 section 35 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    25838  TGGA *  5  18/20    TGGA TAGA TGGA TGGA AGGA
    42181  CTGA *  5  18/20    CTGA CTGA CTGA CTGA CATA
    54566  ACTG *  5  18/20    ACTG ACTG GCTG ACTG GCTG
    63811  AAAT *  5  18/20    AAAT AAAT AAAT AAAC AAAG
    66947  ACAA *  6  22/24    ACAA ACAA ACAA ACAA ACAG AAAA
    89949  TACA *  5  18/20    TACA TACA TACA TACA TATG
    99470  TACA *  5  19/20    TACA TACA TATA TACA TACA
   108434  GTAT *  5  19/20    GTAT GTAC GTAT GTAT GTAT
   110103  TCTT *  5  18/20    TCTT TCTC TCTT TCTC TCTT
   136138  CATA *  5  19/20    CATA CATA CATA CATA TATA
   142232  CACT *  5  18/20    CACT CACT CACT CACT CAGC
   168290  CGAT *  5  18/20    CGAT CGAT CGAT CCAT CGTT
   175528  AACT *  5  18/20    AACT AACT AGCT AACT AACA
   219443  TCAC *  5  18/20    TCAC TCAC TCAC TCGC TCGC
   227885  TGAC *  8  29/32    TGAC TGAC TGAC TGAC TGAC TGAC TGCA TGGC
   235907  ACCA *  5  18/20    ACCA ACCA ACCA ACCA ACTT
   255793  ATGG *  6  22/24    ATGG ATGG ATAG ATGG ATGA ATGG
-----------------------------------------------------------------------------
 Total sequence length.........................       278196 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       17 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AACT-1    ATGG-1    ACAA-1    ACTG-1    ACCA-1    TACA-2    TGAC-1    
 TGGA-1    TCAC-1    TCTT-1    GTAT-1    CATA-1    CACT-1    CTGA-1    CGAT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7303542|gb|AE003824.1|AE003824 Drosophila melanogaster genomic scaffold 142000013386047 section 34 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

     4280  AATA *  5  18/20    AATA AATA ATTA AGTA AATA
    26613  TAAA *  5  18/20    TAAA TATA TAAA TATA TAAA
    26893  TTAT *  5  18/20    TTAT TTAT TTAT ATAT TTTT
    32423  GAAA *  5  18/20    GAAA GAAA AATA GAAA GAAA
    42576  GACG *  5  20/20    GACG GACG GACG GACG GACG
    53054  AGAA *  5  19/20    AGAA AGAA AGAA AGAA AGAT
    53829  ATCT *  6  22/24    ATCT ATAT ATGT ATCT ATCT ATCT
   128756  TATC *  5  18/20    TATC TATC TATC TATA GATC
   150815  CACT *  5  18/20    CACT CTCT CACT CACT CGCT
   160011  GATA *  5  18/20    GATA GATA GATA GATA GTTT
   161553  TGGG *  5  18/20    TGGG TGGG TGGA TGAG TGGG
   169100  ATGT *  5  18/20    ATGT ATTT ATCT ATGT ATGT
   171543  GCCG *  5  18/20    GCCG GCCG GCCG ACCG TCCG
   176604  CAGT *  5  18/20    CAGT CAGT CAGT CATC CAGT
   246101  GGTT *  5  20/20    GGTT GGTT GGTT GGTT GGTT
-----------------------------------------------------------------------------
 Total sequence length.........................       249001 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       15 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AATA-1    ATGT-1    ATCT-1    AGAA-1    TAAA-1    TATC-1    TTAT-1    TGGG-1    
 GAAA-1    GATA-1    GACG-1    GGTT-1    GCCG-1    CAGT-1    CACT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7303489|gb|AE003823.1|AE003823 Drosophila melanogaster genomic scaffold 142000013386047 section 33 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    84244  AACG *  5  18/20    AACG AACG AACG AACG ACTG
    87717  TGTA *  5  18/20    TGTA TGTA TGTA TGTA CGTG
    87972  CCGA *  5  18/20    CCGA AGGA CCGA CCGA CCGA
   122611  TGTC *  6  22/24    TGTC TGTC TGTC TGTC TGTT TGTT
   138790  ATGT *  5  18/20    ATGT AGGT ATGT ATGT ACGT
   151579  CTGG *  8  30/32    CTGG CTGG CTGG CTGG CTGG CTGG CTGG CTCT
   154336  GTTG *  5  18/20    GTTG GATG GTTG GATG GTTG
   154577  TATG *  9  34/36    TATG TATG TATA TATG TATG TTTG TATG TATG TATG
   170076  TCTG *  5  18/20    TCTG TCTC TCTG TCTC TCTG
   181767  TATC *  6  22/24    TATC TATC TATG TATC TATA TATC
   196265  ATTT *  5  18/20    ATTT ATCC ATTT ATTT ATTT
   225755  AATC *  5  18/20    AATC AATC AATA AATC AAAC
   237475  TGTA *  5  18/20    TGTA TGTA TGTA TTTA TCTA
   246723  TAAT *  5  19/20    TAAT TAAT TAAC TAAT TAAT
-----------------------------------------------------------------------------
 Total sequence length.........................       262740 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       14 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AATC-1    AACG-1    ATTT-1    ATGT-1    TAAT-1    TATG-1    TATC-1    TGTA-2    
 TGTC-1    TCTG-1    GTTG-1    CTGG-1    CCGA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7303437|gb|AE003822.1|AE003822 Drosophila melanogaster genomic scaffold 142000013386047 section 32 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    25950  TGGT *  6  22/24    TGGT TGGA TGGT TGTT TGGT TGGT
    32265  CAGC *  5  18/20    CAGC CAGC CAGC CACC CAGT
    47876  GATG *  6  24/24    GATG GATG GATG GATG GATG GATG
    85437  TGTT *  6  22/24    TGTT TGTT TGTT TGTT TTTT TCTT
    97441  CCAG *  5  18/20    CCAG TCAA CCAG CCAG CCAG
   123426  GGTG *  5  18/20    GGTG GGTG GGTT GGTA GGTG
   189187  TGTA *  5  18/20    TGTA TGTA TGTA TATA TATA
   254135  TATG *  8  29/32    TATG TATG TACA TATG TATG TATG TATG TATA
   258693  CCTG *  5  18/20    CCTG ACTG CCTG CCTG GCTG
   261199  ACAT *  6  22/24    ACAT ACAT ATAT ACAT ACAT ATAT
   263685  CGAA *  5  18/20    CGAA CGAA TGAA CGAC CGAA
-----------------------------------------------------------------------------
 Total sequence length.........................       266350 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       11 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ACAT-1    TATG-1    TGTA-1    TGTT-1    TGGT-1    GATG-1    GGTG-1    CAGC-1    
 CGAA-1    CCAG-1    CCTG-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7303396|gb|AE003821.1|AE003821 Drosophila melanogaster genomic scaffold 142000013386047 section 31 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

     8740  GCCT *  5  18/20    GCCT GTCT GCCT GTCT GCCT
    44024  TCCA *  5  18/20    TCCA TCCA ACCA TCGA TCCA
    44045  CCAT * 12  44/48    CCAT CCAT CCAA CCAT CCAT CCAA CCAT CCAG CCAT CCAT CCAA CCAT
    44097  CCAT *  5  18/20    CCAT CCAT CCGT CCAT TCAT
    48860  TCAA *  5  18/20    TCAA TCAA TCAA TCAA TGTA
    49597  GTGA *  6  22/24    GTGA GTGG GTGA GTGA GTGA CTGA
    64474  TGTA *  5  18/20    TGTA AGTA TGTA TGTA TATA
    77349  ATGG *  6  23/24    ATGG ATCG ATGG ATGG ATGG ATGG
    92184  GCTC *  5  18/20    GCTC GCTC GCTC GTTC GTTC
   128562  ATAC *  5  18/20    ATAC ATAC ATAT ATAC CTAC
   151058  ATGT *  6  22/24    ATGT ACAT ATGT ATGT ATGT ATGT
   165275  ATTA *  6  22/24    ATTA ATTA GTCA ATTA ATTA ATTA
   213475  CATA *  5  18/20    CATA CATA CATA CATA TGTA
   275262  GGAT *  5  18/20    GGAT GGAC GAAT GGAT GGAT
   278308  CGTA *  5  18/20    CGTA CGTA CGTA TGTA CATA
   282253  CCAA *  6  22/24    CCAA ACAA CCAA CCAA CCAA CCAG
-----------------------------------------------------------------------------
 Total sequence length.........................       290711 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       16 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATAC-1    ATTA-1    ATGT-1    ATGG-1    TGTA-1    TCAA-1    TCCA-1    GTGA-1    
 GGAT-1    GCTC-1    GCCT-1    CATA-1    CGTA-1    CCAA-1    CCAT-2    
----------------------------------------------------------------------------


Genomic sequence...
gi|7303370|gb|AE003820.1|AE003820 Drosophila melanogaster genomic scaffold 142000013386047 section 30 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

     9452  CATC *  5  20/20    CATC CATC CATC CATC CATC
    62844  GAGT *  5  18/20    GAGT GAGT GAGT GAGA GATT
    63191  ACAA *  8  30/32    ACAA TCAA ACAA ACAA ACAA ACAA ATAA ACAA
    67467  GGAC *  6  22/24    GGAC GGAC GGAC GGAC GGAT GGAT
    67505  ATGG *  5  18/20    ATGG ATGG GTGG ATGG ATAG
    76752  TGTA *  5  18/20    TGTA TGTA TGTA TGTG TGTG
    87063  CATA *  5  18/20    CATA CATA CATA CATA TGTA
   110175  TATG *  5  18/20    TATG TATG TAAG TATG TATA
   122412  TGCC *  5  19/20    TGCC TGCC TGCC TGCT TGCC
   122865  TGAA *  5  19/20    TGAA TGAA TGAA TGAA CGAA
   135958  ATAC *  5  19/20    ATAC ATAC ATAC ATAC ATAT
   143011  TACA *  5  18/20    TACA TAAA TGCA TACA TACA
   167394  AGCC *  6  22/24    AGCC AGCT AGTC AGCC AGCC AGCC
   167496  CTGC *  5  19/20    CTGC CTGC CTGC CTGC CTGA
   182184  CCGA *  8  30/32    CCGA CCGA CCGA CCGA CCGA CCGA CCGA CCTT
   201667  TACA *  6  22/24    TACA TACA TACA TACA TATG TACA
   206476  CTGG *  5  20/20    CTGG CTGG CTGG CTGG CTGG
   208996  AGAT *  5  18/20    AGAT AGAT ATAT AGAT AGAG
   223185  TACA *  6  24/24    TACA TACA TACA TACA TACA TACA
-----------------------------------------------------------------------------
 Total sequence length.........................       272870 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       19 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATAC-1    ATGG-1    AGAT-1    AGCC-1    ACAA-1    TATG-1    TACA-3    TGAA-1    
 TGTA-1    TGCC-1    GAGT-1    GGAC-1    CATA-1    CATC-1    CTGG-1    CTGC-1    
 CCGA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7303326|gb|AE003819.1|AE003819 Drosophila melanogaster genomic scaffold 142000013386047 section 29 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

     3038  TGTT *  5  18/20    TGTT TGTT TGTT TGCT TGTG
     4355  CTCA *  6  22/24    CTCA CTCA CTCA CTCG TTCA CTCA
     6291  TATG *  5  18/20    TATG TATG TATG TACG TTTG
    10845  GCAG *  5  19/20    GCAG GCAA GCAG GCAG GCAG
    11273  GGAC *  5  18/20    GGAC GGAC GGAC GGAT GGAT
    25600  CTGG *  7  26/28    CTGG CTGG CTGG CTGG CTGG CTGG GTGA
    48775  TATT *  5  18/20    TATT TATT TGAT TATT TATT
    84499  GCTG *  5  19/20    GCTG GCTG CCTG GCTG GCTG
   127761  TAAA *  5  19/20    TAAA CAAA TAAA TAAA TAAA
   138099  GCCA * 20  72/80    GCCA CCCA GCCA GCCA GCCA GCCA GCCA GCCA GCCA GCCA GCCA GCCA GCCA GCCA GCCA GCCA GCCA GCTG TCCT GAAC
   152850  CAAT *  8  30/32    CAAT CAAT CAAA CAAT CAAT CAAT CAAT CAAA
   232116  GGAT *  6  22/24    GGAT GGAT GGAT GGAT GGAT GCAC
   236956  AGCC *  5  19/20    AGCC AGCC AGCC AGCC AGCA
-----------------------------------------------------------------------------
 Total sequence length.........................       237528 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       13 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AGCC-1    TAAA-1    TATT-1    TATG-1    TGTT-1    GGAT-1    GGAC-1    GCAG-1    
 GCTG-1    GCCA-1    CAAT-1    CTGG-1    CTCA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7303288|gb|AE003818.1|AE003818 Drosophila melanogaster genomic scaffold 142000013386047 section 28 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    35613  ATAC *  6  22/24    ATAC ATAC ATAC ATAT ATAC ATAT
    39638  AATA *  5  18/20    AATA AATA AATA TTTA AATA
    49592  TTTG *  5  18/20    TTTG TTTG TTTG TTTG ATTT
    52450  AGAC *  5  18/20    AGAC AGAC AGAC AAAC ATAC
    72677  GCTG *  5  18/20    GCTG GCAG GCTG GCTG GCAG
    92628  CTGG *  6  22/24    CTGG CTCG ATGG CTGG CTGG CTGG
   104392  CAAT *  6  22/24    CAAT CAAT CAAT CAAT GAAT CAAA
   105043  CCAC *  6  22/24    CCAC CCAC CCAC CCAC ACAC CCGC
   121524  CAGA *  5  18/20    CAGA CAGA CAGA CGGG CAGA
   121573  GGAT *  6  23/24    GGAT GGAT AGAT GGAT GGAT GGAT
   122231  TTGG *  5  18/20    TTGG TTGG CTGG TTGG TCGG
   132931  AGCA *  5  18/20    AGCA GGCA ACCA AGCA AGCA
   144207  CATA *  5  18/20    CATA TGTA CATA CATA CATA
   192035  TATG *  5  19/20    TATG TATG TATG TATG TACG
   205043  TACA *  5  18/20    TACA TACA TACA TACA TCCG
   207374  GTAT *  5  18/20    GTAT GTAT GTAT GTAT GTGC
   207540  ACCA *  5  19/20    ACCA ACCA ACCA ACCA CCCA
   211758  GACA *  5  18/20    GACA GACA GACA GACG GACG
   234506  TATG *  5  19/20    TATG TATG TATG TACG TATG
   247505  TGGC *  6  24/24    TGGC TGGC TGGC TGGC TGGC TGGC
   262647  TGAT *  6  23/24    TGAT TGAA TGAT TGAT TGAT TGAT
-----------------------------------------------------------------------------
 Total sequence length.........................       264644 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       21 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AATA-1    ATAC-1    AGAC-1    AGCA-1    ACCA-1    TATG-2    TACA-1    TTTG-1    
 TTGG-1    TGAT-1    TGGC-1    GACA-1    GTAT-1    GGAT-1    GCTG-1    CAAT-1    
 CATA-1    CAGA-1    CTGG-1    CCAC-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7303263|gb|AE003817.1|AE003817 Drosophila melanogaster genomic scaffold 142000013386047 section 27 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    20349  CTAT *  6  22/24    CTAT CTAT CTAT CTGT CTAT GTAT
    32552  TTTA *  5  18/20    TTTA TTTA TTTA TTTT TTTC
    33714  CATA *  5  18/20    CATA CATA CATC CATG CATA
    37485  CACT *  5  18/20    CACT CACT CACT CACA CACA
    53023  TACA *  5  18/20    TACA TATG TACA TACA TACA
    53108  ACAT *  8  30/32    ACAT ACAT ACAT ACAT ACAT ACAT ACAT ATGT
    60609  ACAT *  6  22/24    ACAT ACAT GCAA ACAT ACAT ACAT
    70769  ATAC *  6  22/24    ATAC ATAC ATAA ATAC ATAC ATAT
    71066  GATA *  5  18/20    GATA AATA GATA GATA GATG
    74922  ACCA *  5  18/20    ACCA ACCG AGCA ACCA ACCA
   107435  TGTT *  5  19/20    TGTT TGTT CGTT TGTT TGTT
   131072  TGAG *  5  18/20    TGAG TGAG TGAG TGAG AGAC
   142923  CTGT * 11  40/44    CTGT ACGT CTGT CTGT CTGT CTGT CTGT CTAT CTGT CCGT CTGT
   147942  TTGT *  5  18/20    TTGT TTTT TTTT TTGT TTGT
   148300  CAGA *  7  26/28    CAGA CAGA CAGA CAGA CAGA TGGA CAGA
   151041  CACT *  5  18/20    CACT CACT CACA CACC CACT
   158531  CAGA *  5  18/20    CAGA CAGA CAGA CAGT CTGA
   161581  ACAT *  5  18/20    ACAT ACAT AAAT ACAT ATAT
   161643  GGCT *  5  18/20    GGCT AGCT GGCT CGCT GGCT
   177864  ACTG * 11  40/44    ACTG ACTG ACTG GCTG ACTG ACTG ACTG ACTG ACAG TCGG ACTG
   180819  CGGA *  6  22/24    CGGA CGGA CTGG CGGA CGGA CGGA
   197478  GGTC *  5  19/20    GGTC GGTC GGTC GGTT GGTC
   199593  CGGA *  5  19/20    CGGA CGAA CGGA CGGA CGGA
   211328  GGCT *  6  22/24    GGCT GGCT GGCT GGAT GGCT GGGT
   216714  TGTC *  5  19/20    TGTC TGTC TGTC TTTC TGTC
   236004  CTCC *  5  18/20    CTCC CTCC CGCC GTCC CTCC
   248604  ATTT *  5  18/20    ATTT ATTT CTTT ATCT ATTT
-----------------------------------------------------------------------------
 Total sequence length.........................       262257 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       27 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATAC-1    ATTT-1    ACAT-3    ACTG-1    ACCA-1    TACA-1    TTTA-1    TTGT-1    
 TGAG-1    TGTT-1    TGTC-1    GATA-1    GGTC-1    GGCT-2    CATA-1    CAGA-2    
 CACT-2    CTAT-1    CTGT-1    CTCC-1    CGGA-2    
----------------------------------------------------------------------------


Genomic sequence...
gi|7303233|gb|AE003816.1|AE003816 Drosophila melanogaster genomic scaffold 142000013386047 section 26 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    28228  TCTG *  5  18/20    TCTG TCTG TCTG TCAG TCAG
    36074  GTTT *  5  18/20    GTTT TTTT TTTT GTTT GTTT
    39069  TTTG *  5  20/20    TTTG TTTG TTTG TTTG TTTG
    48258  CAAT *  6  22/24    CAAT CAAT CAAT CAAT CAAT CATC
    71259  ATAC *  5  18/20    ATAC AAAC AAAC ATAC ATAC
    72405  TCTA *  5  18/20    TCTA TCTG TCTA TCTA TCTC
    90726  CTCA *  5  18/20    CTCA CTCA CTCA CGCA CACA
   104985  TGTA *  5  18/20    TGTA TATA TGTT TGTA TGTA
   138048  TGTA *  6  22/24    TGTA TGTA TCTA TATA TGTA TGTA
   163519  AACA *  5  18/20    AACA AAGA AACA AACA ATCA
   190695  ATTA * 13  47/52    ATTA ATTA ATTA ATTA ATTA ATTA ATTA ATTA ATTA ATTA ATTA TTAA TATT
   190747  AATT *  6  23/24    AATT AATT AATT AATT AATT AATA
   191536  AAAT *  5  18/20    AAAT AAAT AAAT GACT AAAT
   199404  TGTT *  5  18/20    TGTT TTTT TGTT TTTT TGTT
   200035  CTGA *  9  34/36    CTGA ATGA CTGG CTGA CTGA CTGA CTGA CTGA CTGA
   207173  TGTT *  6  23/24    TGTT TGTT TGTT TGTT TGTT TGTC
   216973  AACC *  5  19/20    AACC AACC AACC AACC AATC
   253195  ACAT *  5  18/20    ACAT AAAT ACAT AAAT ACAT
-----------------------------------------------------------------------------
 Total sequence length.........................       260779 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       18 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AATT-1    AACA-1    AACC-1    ATAC-1    ATTA-1    ACAT-1    TTTG-1    
 TGTA-2    TGTT-2    TCTA-1    TCTG-1    GTTT-1    CAAT-1    CTGA-1    CTCA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7303189|gb|AE003815.1|AE003815 Drosophila melanogaster genomic scaffold 142000013386047 section 25 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    17751  GTAT *  5  19/20    GTAT GTAT ATAT GTAT GTAT
    31182  GATC *  6  22/24    GATC GATC GATA GATC GATC GAGC
    32203  TATG *  6  22/24    TATG CATG TATG TATG TATG TATA
    42216  TCAC *  5  18/20    TCAC TCAC TCAC TCAC CCAG
    42236  TCAG *  6  22/24    TCAG TCAG TCAG ACAG TCAG TCAT
    59677  AATA *  5  18/20    AATA AATT AATA AATA AATT
    62397  CAGT *  8  30/32    CAGT CAGT CAGT CAGT CAGT CAGT TAGC CAGT
    63718  AAAT *  5  18/20    AAAT AAAT AAAT AAAA AACT
    66806  TTGT *  5  18/20    TTGT TTTG TTGT TTGT TTGT
    66914  TGTC *  5  19/20    TGTC TGTC TGTC TGAC TGTC
    71782  GAAC *  5  19/20    GAAC GTAC GAAC GAAC GAAC
    71825  AACG *  5  18/20    AACG AACA ATCG AACG AACG
    74263  GTTA *  8  29/32    GTTA CTTA GTTA GTTA ATTA GTTA GTTA GTTG
    82986  CTGC *  5  19/20    CTGC CTGG CTGC CTGC CTGC
    86250  AATT *  5  18/20    AATT AATT AATA ATTT AATT
    89210  GTGC *  5  18/20    GTGC GTGT GTGC GTGC GTGT
    98585  GATA *  5  18/20    GATA GATA GAAA GATA CATA
   136008  ATTG *  5  19/20    ATTG ATTG ATTG TTTG ATTG
   145179  TTCT *  5  18/20    TTCT TTCT TTCT TTTT TTTT
   147089  TATG *  5  19/20    TATG TATG TATG TATG TTTG
   149262  ATTT *  5  18/20    ATTT TTTT ATTT ATTA ATTT
   153419  CGAA *  5  19/20    CGAA CGAA CGAA CGAA TGAA
   154021  AGTT * 10  36/40    AGTT AGTT AGTT TGTT AGTT AGTT AGTT AGTT ACTT GCTT
   157989  ACAT *  5  18/20    ACAT ACAT ACAC ACAT ATAT
   158276  CCGA *  6  23/24    CCGA TCGA CCGA CCGA CCGA CCGA
   159662  TACA *  5  18/20    TACA TACA TATA TACA TATA
   160466  ACGG *  5  18/20    ACGG ACAG GCGG ACGG ACGG
   161270  CCAG *  8  30/32    CCAG CAAA CCAG CCAG CCAG CCAG CCAG CCAG
   161938  AATT *  5  18/20    AATT AATT AATT AATT AGAT
   179226  GCGA *  5  18/20    GCGA GCGA GAGA GCCA GCGA
   188716  CATA *  5  18/20    CATA CATA CATA CACA CACA
   190018  TATG *  6  22/24    TATG TAGG TATG TATG TATG TATT
-----------------------------------------------------------------------------
 Total sequence length.........................       240495 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       32 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AATA-1    AATT-2    AACG-1    ATTT-1    ATTG-1    AGTT-1    ACAT-1    
 ACGG-1    TATG-3    TACA-1    TTGT-1    TTCT-1    TGTC-1    TCAG-1    TCAC-1    
 GAAC-1    GATA-1    GATC-1    GTAT-1    GTTA-1    GTGC-1    GCGA-1    CATA-1    
 CAGT-1    CTGC-1    CGAA-1    CCAG-1    CCGA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7303162|gb|AE003814.1|AE003814 Drosophila melanogaster genomic scaffold 142000013386047 section 24 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    31832  AACC *  8  30/32    AACC AACC AACC AACC AACC AACC AACG AACA
    43249  ACCA *  5  18/20    ACCA ACCA ACAT ACCA ACCA
    45593  TATG *  5  18/20    TATG TATG TATA TATG TCTG
    49723  TCCA *  6  22/24    TCCA TCCA TCCA TCCA TCCG TCCG
    64767  AAAT *  5  18/20    AAAT AAAC AAAC AAAT AAAT
    75910  TGAC *  5  18/20    TGAC TGAC AAAC TGAC TGAC
    88095  AAAT *  6  22/24    AAAT AAAT AAAT AAAT AATT AATT
   142515  GACT *  6  22/24    GACT GACT GGCT GACC GACT GACT
   147810  AGAA *  6  22/24    AGAA AGAA AGAA AGAA TGAA AAAA
   152887  ATAC *  5  18/20    ATAC ATAC ATAC ATAT ATAA
   176603  ATGA *  5  18/20    ATGA ATGA ATGA ATGA AAGG
   176821  GGAT *  5  18/20    GGAT GGTT GGAT GGCT GGAT
   200255  TGGC *  8  32/32    TGGC TGGC TGGC TGGC TGGC TGGC TGGC TGGC
   240580  TAAA *  5  18/20    TAAA AAAA TAAA TAAA TAAT
-----------------------------------------------------------------------------
 Total sequence length.........................       260713 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       14 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-2    AACC-1    ATAC-1    ATGA-1    AGAA-1    ACCA-1    TAAA-1    TATG-1    
 TGAC-1    TGGC-1    TCCA-1    GACT-1    GGAT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7303119|gb|AE003813.1|AE003813 Drosophila melanogaster genomic scaffold 142000013386047 section 23 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    77493  TGGA *  5  18/20    TGGA TGGG TGGA TGGA TGGG
   120937  AAAT *  5  18/20    AAAT AAAT AAAT AAAT AATG
   169961  AAAT *  6  23/24    AAAT AAAT AAAT AAAT AAAT AACT
   175068  AAAG *  5  18/20    AAAG AAAG AAAG AATG AAAA
   192321  AAAC *  5  18/20    AAAC AAAC AAAC AAAT AAAG
   198857  ACCA *  5  19/20    ACCA ACCA ACCA ACCA CCCA
   219254  GTCA *  5  18/20    GTCA GTCA GTCA GTCA GTAG
   220567  AGGA *  6  23/24    AGGA AGGA AGGC AGGA AGGA AGGA
   242215  GTCC *  6  22/24    GTCC GTTC GTCC GTCC ATCC GTCC
   256663  ACCC *  5  18/20    ACCC AACC ACCC AACC ACCC
-----------------------------------------------------------------------------
 Total sequence length.........................       258778 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       10 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-2    AAAG-1    AAAC-1    AGGA-1    ACCA-1    ACCC-1    TGGA-1    GTCA-1    
 GTCC-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7303102|gb|AE003812.1|AE003812 Drosophila melanogaster genomic scaffold 142000013386047 section 22 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    48640  ATAC *  5  18/20    ATAC ATAC ATAC ATAC GTAT
    65171  ATAC *  5  18/20    ATAC ATAT ATAC ATAT ATAC
    65195  ATAC *  5  18/20    ATAC ATAT ATAC ATAT ATAC
    65219  ATAC *  5  18/20    ATAC ATAT ATAC ATAT ATAC
    65243  ATAC *  5  18/20    ATAC ATAT ATAC ATAT ATAC
    65267  ATAC *  5  18/20    ATAC ATAT ATAC ATAT ATAC
    65311  CATA *  5  18/20    CATA TATA CATA TATA CATA
    65332  ATAC *  5  18/20    ATAC ATAT ATAC ATAT ATAC
    65356  ATAC *  5  18/20    ATAC ATAT ATAC ATAT ATAC
    65388  ATAC *  5  18/20    ATAC ATAT ATAC ATAT ATAC
    65412  ATAC *  5  18/20    ATAC ATAT ATAC ATAT ATAC
    65436  ATAC *  5  18/20    ATAC ATAT ATAC ATAT ATAC
    65460  ATAC *  5  18/20    ATAC ATAT ATAC ATAT ATAC
    65484  ATAC *  5  18/20    ATAC ATAT ATAC ATAT ATAC
    65508  ATAC *  5  18/20    ATAC ATAT ATAC ATAT ATAC
    65532  ATAC *  5  18/20    ATAC ATAT ATAC ATAT ATAC
    65556  ATAC *  5  18/20    ATAC ATAT ATAC ATAT ATAC
    65580  ATAC *  5  18/20    ATAC ATAT ATAC ATAT ATAC
    65607  ACAT *  5  18/20    ACAT ATAT ACAT ATAT ACAT
    65673  TACA *  5  18/20    TACA TATA TACA TATA TACA
    67977  TGGC *  6  23/24    TGGC TGGT TGGC TGGC TGGC TGGC
    78952  CCAG *  5  20/20    CCAG CCAG CCAG CCAG CCAG
    88799  CAAC *  5  18/20    CAAC CAAC CAAC CAAC TACC
    92905  GTGG *  5  18/20    GTGG TTGG GTGG TTGG GTGG
   108536  TATG *  8  31/32    TATG TATG TATG TATG TATG TATG TATG TATA
   117858  CCAG *  5  18/20    CCAG TCAG CCAG CCAT CCAG
   139838  AGCT *  5  18/20    AGCT CGGT AGCT AGCT AGCT
   140496  CACT *  7  26/28    CACT CACT CACT CACT CACT TGCT CACT
   140697  TATT *  8  29/32    TATT TATT TATT TATT TATT TATT TATT ACTA
   151094  ACAG *  5  18/20    ACAG ACAA ACAG ACAG ACAC
   152079  TACA *  5  18/20    TACA TACA TATA TACA TATA
   152770  GTAC *  5  19/20    GTAC ATAC GTAC GTAC GTAC
   156640  CTGG *  5  18/20    CTGG CAAG CTGG CTGG CTGG
   181540  AAGT *  5  20/20    AAGT AAGT AAGT AAGT AAGT
   183610  AGTG *  5  18/20    AGTG AGTG AGTG TGTG TGTG
   222506  TAAA *  5  18/20    TAAA TAAC CAAA TAAA TAAA
   232640  ACAT *  6  22/24    ACAT ACTT ATAT ACAT ACAT ACAT
-----------------------------------------------------------------------------
 Total sequence length.........................       257946 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       37 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAGT-1    ATAC-17   AGTG-1    AGCT-1    ACAT-2    ACAG-1    TAAA-1    TATT-1    
 TATG-1    TACA-2    TGGC-1    GTAC-1    GTGG-1    CAAC-1    CATA-1    CACT-1    
 CTGG-1    CCAG-2    
----------------------------------------------------------------------------


Genomic sequence...
gi|7303071|gb|AE003811.1|AE003811 Drosophila melanogaster genomic scaffold 142000013386047 section 21 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    11048  CGAC *  5  19/20    CGAC CAAC CGAC CGAC CGAC
    26192  GCTG *  5  19/20    GCTG GTTG GCTG GCTG GCTG
    60477  GTCA *  5  19/20    GTCA GTCA GTCA GTCA GCCA
    80656  TATT *  5  18/20    TATT TATT TTTT TATG TATT
    98135  ATTT *  5  18/20    ATTT ATTT ATTT ATAT CTTT
   116588  GCTG *  6  23/24    GCTG GCTG GCTG GCTG GCTA GCTG
   128756  GTCG *  5  18/20    GTCG GTCG GTCG GTGG GTTG
   130112  AAAC *  5  18/20    AAAC AAAC AAAC AAAC AGCC
   142512  TTCT *  6  22/24    TTCT TTCT TTCT TTCT GTCA TTCT
   142962  AAAT *  6  23/24    AAAT AAAT AAAT AAAT AAAT AAAA
   175220  CAAA *  8  30/32    CAAA CAAA CAAA CAAA CCAA CAAA CAAA CAGA
   179813  TTTC *  6  22/24    TTTC TTTC TTTC TTTC TTTC TTCA
   195349  TTAT *  6  22/24    TTAT TTAT TTAG TTTT TTAT TTAT
-----------------------------------------------------------------------------
 Total sequence length.........................       259379 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       13 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AAAC-1    ATTT-1    TATT-1    TTAT-1    TTTC-1    TTCT-1    GTCA-1    
 GTCG-1    GCTG-2    CAAA-1    CGAC-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7303048|gb|AE003810.1|AE003810 Drosophila melanogaster genomic scaffold 142000013386047 section 20 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

      789  CCTG * 10  36/40    CCTG CCTG CCTG CCTG CCTG CCTG ACTG ACTG ACTG ACTG
    29578  CCAT * 10  36/40    CCAT CCTT CCAA CCAT CCAT CCAT CCAT CCAT CCGT CTAT
    38413  ATTG *  5  18/20    ATTG ATTG ATTG ATTG AACG
    44711  TGGC *  5  18/20    TGGC TGGC TGAC TGCC TGGC
    48275  CGGT *  6  23/24    CGGT CGGT CGGT GGGT CGGT CGGT
    69052  CGCA *  5  18/20    CGCA CGCA CGCA CACA CACA
    69102  AACA *  5  18/20    AACA AACA AACA AATA AAAA
    80658  TGGG *  5  18/20    TGGG TGGA TGGG TGGG CGGG
    96049  GTCA *  5  18/20    GTCA GTCA GTCA GTCA TTGA
   153795  ATCC *  6  22/24    ATCC ATCC ATCC ATCC AACC AACC
   157956  ATAA *  6  22/24    ATAA ATAA ATAT ATAA ATAA ATAT
   160340  GACT *  5  18/20    GACT GACC GACC GACT GACT
   192563  CATC *  5  19/20    CATC CATC CATC CATC CAGC
   196191  GACT *  5  18/20    GACT GACT GAAT GACG GACT
   225352  CCTG *  5  18/20    CCTG CCTG GCTG ACTG CCTG
   232822  CAGT *  8  29/32    CAGT CCAT CAGT CAGT CAGT CAGT CAGT CATT
   244659  TATT *  5  18/20    TATT TATT TATG TATA TATT
-----------------------------------------------------------------------------
 Total sequence length.........................       258873 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       17 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AACA-1    ATAA-1    ATTG-1    ATCC-1    TATT-1    TGGG-1    TGGC-1    GACT-2    
 GTCA-1    CATC-1    CAGT-1    CGGT-1    CGCA-1    CCAT-1    CCTG-2    
----------------------------------------------------------------------------


Genomic sequence...
gi|7303026|gb|AE003809.1|AE003809 Drosophila melanogaster genomic scaffold 142000013386047 section 19 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    15018  CAGA *  5  18/20    CAGA GAGA CAGA CAGA CGGA
    32703  GACG *  5  18/20    GACG AACG GATG GACG GACG
    34777  ACCG *  5  18/20    ACCG ACCG ACCG ACCG ATCC
    39709  AAGC *  5  18/20    AAGC AAGC AAGC GAGC GAGC
    44061  TGTA *  6  23/24    TGTA TGTA TGTA TGTA TGTA TATA
    78465  TATG *  5  19/20    TATG TATG TATG TATG TGTG
    83401  TTTC *  5  18/20    TTTC TTTC TTTT TTTC TTTT
    91628  GCCA *  5  19/20    GCCA GCCA GCCA GCCA GCCG
   109075  ATGG *  5  19/20    ATGG ATGG ATGG ATAG ATGG
   140188  TATT *  5  18/20    TATT TATT TATT TATT TCAT
   144406  TGTC *  5  18/20    TGTC TGTC TGCC TGTC CGTC
   160168  TGTT *  5  19/20    TGTT TGTC TGTT TGTT TGTT
   168758  TTTA *  5  18/20    TTTA TTTA TTTA TTTA TATT
   176472  CAGG *  5  18/20    CAGG CAGC CAGG CAGG CAGA
   187270  GGTT *  8  29/32    GGTT GGTT GGTT GGTT GGTT GGTT GGTC TGTG
   197494  AGCC *  6  22/24    AGCC AGCC AGCA AGCC AGCC ATCC
   207001  CGTG *  5  18/20    CGTG CGTG CGTG TGTG TGTG
   212817  TATG *  5  19/20    TATG TATG TATG TATG TACG
   226255  AAGT *  6  22/24    AAGT AAGT AAGT AAGT ATGT ATGT
   233695  AATA *  5  18/20    AATA AATA AATA AAAA ATTA
   259416  GGAC *  6  22/24    GGAC AAAC GGAC GGAC GGAC GGAC
-----------------------------------------------------------------------------
 Total sequence length.........................       260968 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       21 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AATA-1    AAGT-1    AAGC-1    ATGG-1    AGCC-1    ACCG-1    TATT-1    TATG-2    
 TTTA-1    TTTC-1    TGTA-1    TGTT-1    TGTC-1    GACG-1    GGAC-1    GGTT-1    
 GCCA-1    CAGA-1    CAGG-1    CGTG-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7302975|gb|AE003808.1|AE003808 Drosophila melanogaster genomic scaffold 142000013386047 section 18 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

     9486  TGGG *  6  22/24    TGGG TTGG TGTG TGGG TGGG TGGG
    45987  GCAC *  5  18/20    GCAC GCAC GCAC ACAT GCAC
    66929  ATAC *  5  18/20    ATAC GTAG ATAC ATAC ATAC
   115420  TACA *  5  18/20    TACA TACA TACA TACG TACG
   127129  GCCA *  6  22/24    GCCA GGCA GCCA GGCA GCCA GCCA
   129627  CAGC *  5  18/20    CAGC CAGC CAGC CATC CAGT
   136103  TTTA *  5  18/20    TTTA TTTA TTCA TTCA TTTA
   137492  TCCA *  6  23/24    TCCA TCCA TCCA TCCA TCCA TCTA
   140742  AGAT *  5  18/20    AGAT AGAT ACAT AGAT GGAT
   143694  CCAT *  5  18/20    CCAT CCAA CCAT CCAC CCAT
   145191  AGGA *  6  22/24    AGGA AGGA AGGA AGTC AGGA AGGA
   172257  ACAT *  5  18/20    ACAT ACAT ACAT ATAT ACCT
   197094  TTTG *  5  18/20    TTTG TTTT TTTG TTTT TTTG
   237073  GCAG *  6  22/24    GCAG GCAG GCAG GCAG GCAG GAGG
   247060  CCCA *  5  18/20    CCCA CCCA CCCA CACA CACA
-----------------------------------------------------------------------------
 Total sequence length.........................       262173 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       15 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATAC-1    AGAT-1    AGGA-1    ACAT-1    TACA-1    TTTA-1    TTTG-1    TGGG-1    
 TCCA-1    GCAG-1    GCAC-1    GCCA-1    CAGC-1    CCAT-1    CCCA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7302923|gb|AE003807.1|AE003807 Drosophila melanogaster genomic scaffold 142000013386047 section 17 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

       80  TTTG *  9  33/36    TTTG TTTG TTTG TTTG TTTA TTTA TTTG CTTG TTTG
    14453  CAGT *  6  23/24    CAGT CAGT CAGT CAGT CAGT CAAT
    23407  TATG *  5  18/20    TATG TATG TATG TACA TATG
    37128  AAAG *  5  18/20    AAAG AAAG AAAG AAAA AAAA
    61135  CCAA *  7  26/28    CCAA CCAA CCAA CCAA CCAA CCAG CCAG
    61931  TTTG *  5  20/20    TTTG TTTG TTTG TTTG TTTG
    62704  CCAC *  5  19/20    CCAC CCAC CCAA CCAC CCAC
    92113  CCAT *  5  19/20    CCAT CCAT CCAT CCAT CCAC
   148086  GCCA *  6  22/24    GCCA GCCA GCCA GCCA GCTA GCGA
   158521  ATCT * 89 321/356   ATCT ATCT ATCT ATCT ATTT ATCC ATCT ATCT ATCT ATCT ATCT ATCT TTCT CTCT CTCT ATCT ATCT ATCT ATAT ATCT ATCT ATAT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATAT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATAT ATCT ATCT ATCT CTCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT CTCT ATCT ATCT ATCT ATAT ATAT TAAC GAAT CTAT TATC TTAT CAAT TGTC
   245010  CTAT *  5  19/20    CTAT CTAT CTAT CTAT ATAT
   248347  GCCA *  5  18/20    GCCA ACCA GCCA ACCA GCCA
   248369  CAGC *  5  18/20    CAGC CAGC TAGC TAGC CAGC
   259033  TTGG *  8  30/32    TTGG CTGG TTGA TTGG TTGG TTGG TTGG TTGG
-----------------------------------------------------------------------------
 Total sequence length.........................       260067 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       14 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAG-1    ATCT-1    TATG-1    TTTG-2    TTGG-1    GCCA-2    CAGT-1    CAGC-1    
 CTAT-1    CCAA-1    CCAT-1    CCAC-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7302890|gb|AE003806.1|AE003806 Drosophila melanogaster genomic scaffold 142000013386047 section 16 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

     4966  TACT *  5  18/20    TACT TAAT TACT TACT CACT
    15155  TGGC *  6  23/24    TGGC TGGC TGGC TGGC TGGC TGCC
    17857  TGGA *  5  18/20    TGGA TGGG TGGA TGGG TGGA
    39690  TGCC *  5  19/20    TGCC AGCC TGCC TGCC TGCC
    45206  ACAA *  5  18/20    ACAA ACAC ACAC ACAA ACAA
    56640  TATT *  5  18/20    TATT TATT TATT TATT TAAA
    80275  GGAT *  5  18/20    GGAT GGTT GGAT GGAT GGAC
    82112  ACAT *  5  19/20    ACAT ACAT ACAT AGAT ACAT
    85650  AAAC *  5  18/20    AAAC AAAT AAAC AAAC ACAC
    99250  TTGA *  8  29/32    TTGA TTGA TTGA TTGA TTGA TTGA TTGT TGGC
   104811  GTGG *  5  18/20    GTGG GTGG TTTG GTGG GTGG
   107195  CATT *  5  18/20    CATT CATT CATT CATT CACA
   119273  CAAA *  5  19/20    CAAA CAGA CAAA CAAA CAAA
   143563  GGAC *  6  22/24    GGAC AAAC GGAC GGAC GGAC GGAC
   145322  TATG *  5  18/20    TATG TATG TATG TATG TAGA
   149115  TTTA *  6  22/24    TTTA TTTA TTTA TTTA TTTT TTTT
   151290  CTTT *  5  18/20    CTTT CTTA CTTT CTTA CTTT
   161181  AAGA *  5  18/20    AAGA AAGC AATA AAGA AAGA
   161532  TATG *  5  18/20    TATG TACA TATG TATG TATG
   209635  GGAT *  5  18/20    GGAT GGAT GGAT GGAT GGCA
   237416  TTTA *  5  18/20    TTTA TTTA TTTA TTTC TTTT
   243939  GTCC *  6  23/24    GTCC GTCC GTCC GTCC GTCC GTCG
   260706  CATT *  5  18/20    CATT CATT CGTT CATT TATT
-----------------------------------------------------------------------------
 Total sequence length.........................       268219 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       23 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAC-1    AAGA-1    ACAA-1    ACAT-1    TATT-1    TATG-2    TACT-1    TTTA-2    
 TTGA-1    TGGA-1    TGGC-1    TGCC-1    GTGG-1    GTCC-1    GGAT-2    GGAC-1    
 CAAA-1    CATT-2    CTTT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7302851|gb|AE003805.1|AE003805 Drosophila melanogaster genomic scaffold 142000013386047 section 15 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

      449  GTTA *  5  19/20    GTTA GTTA TTTA GTTA GTTA
    35832  TGTA *  5  18/20    TGTA ATTA TGTA TGTA TGTA
    50542  ACTG *  6  22/24    ACTG ACTG ACTG ACTG ACTG GGTG
    73608  TTTA *  5  19/20    TTTA TTTA TTTA TTTA TTTT
    84885  TTTA *  5  18/20    TTTA TTTA TTTT TTTC TTTA
   104836  CCTC *  5  18/20    CCTC CCTC CCTC TCTC GCTC
   107058  CCAC *  5  18/20    CCAC CCAC CCAC CAAC ACAC
   139478  CGAG *  5  18/20    CGAG CGAG CAAG CGAG TGAG
   157870  TGCC *  5  18/20    TGCC TGAC TGCC TGGC TGCC
   171291  GACG *  5  18/20    GACG GACG AACG GACG GACA
   174708  TTTG *  5  18/20    TTTG TTTG TTTG TTGG TTTT
   178557  AAAT *  5  18/20    AAAT AGGT AAAT AAAT AAAT
   180670  AACA *  8  29/32    AACA AACA AACA AACA AACA AATG AACA AATA
   188264  TGTA *  5  18/20    TGTA GGTA CGTA TGTA TGTA
   211083  TACA *  5  18/20    TACA TACA TACA TATG TACA
   225922  CTTC *  6  22/24    CTTC CTTC CTTC CTTT CTTC CTTT
   257417  TGTT *  6  23/24    TGTT TGTT TGCT TGTT TGTT TGTT
   264086  TATG *  6  22/24    TATG TATA TATG TATG TATG TATA
   270099  TACA *  5  18/20    TACA TATG TACA TACA TACA
-----------------------------------------------------------------------------
 Total sequence length.........................       270307 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       19 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AACA-1    ACTG-1    TATG-1    TACA-2    TTTA-2    TTTG-1    TGTA-2    
 TGTT-1    TGCC-1    GACG-1    GTTA-1    CTTC-1    CGAG-1    CCAC-1    CCTC-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7302807|gb|AE003804.1|AE003804 Drosophila melanogaster genomic scaffold 142000013386047 section 14 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

     2243  TTGT *  5  20/20    TTGT TTGT TTGT TTGT TTGT
     4694  TGGA * 11  41/44    TGGA TGGA TGGA TGGT TAGA TGGA TGGA TGGA TGGA TGGA TGGC
    21260  AGCT *  5  18/20    AGCT AGCT AGCT AGTT CGCT
    34420  ATAA *  5  19/20    ATAA ATAA ATAA ATAA AAAA
    70277  GACA *  6  22/24    GACA GACA GACA GACA GACA TACG
    83732  ACAT *  5  18/20    ACAT ACAA ACAT ACAC ACAT
    89346  CCAT *  5  18/20    CCAT CCAT CCAT CTAT CTAT
    89367  TATC *  5  20/20    TATC TATC TATC TATC TATC
   114507  TATG *  5  18/20    TATG TATG TATG TATG CAGG
   172238  AATA *  5  19/20    AATA AATA AATA AATA AATT
   227905  GACT *  5  19/20    GACT GACT GACT GACT GAGT
   229099  ACAT *  5  18/20    ACAT GCAT GCAT ACAT ACAT
   244782  ATTT *  5  18/20    ATTT ATTT ATTT ATCT ACTT
   246476  GCTC *  5  18/20    GCTC GCTC GCTC GCTC GCCT
-----------------------------------------------------------------------------
 Total sequence length.........................       259817 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       14 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AATA-1    ATAA-1    ATTT-1    AGCT-1    ACAT-2    TATG-1    TATC-1    TTGT-1    
 TGGA-1    GACA-1    GACT-1    GCTC-1    CCAT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7302766|gb|AE003803.1|AE003803 Drosophila melanogaster genomic scaffold 142000013386047 section 13 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

     5402  ATCC *  5  19/20    ATCC ATCC ATCC ATCC ATCG
     9289  GTTT *  7  26/28    GTTT GTTT GTTT GTTC GTTT GTTT GTCT
    10214  CCAC *  5  18/20    CCAC CCAC CGAC CCAC ACAC
    63892  TATT *  6  22/24    TATT TATT TATT CATT TAGT TATT
    76792  TGTT *  5  18/20    TGTT TGTT TGTT TGTG TGTG
    77068  TGTA *  5  18/20    TGTA TGCA TGTA AGTA TGTA
    85869  TACA *  5  18/20    TACA TACA TATG TACA TACA
    95871  TACA *  5  18/20    TACA TACA TACA TACA TATG
   150962  TCAT *  5  18/20    TCAT TCAT TCAT TAAT GCAT
   152511  GTCC *  6  22/24    GTCC GTCC GTCC GTCT GTCC GTCT
   156488  ATTT *  5  18/20    ATTT ACTT ATTT ATTT ATGT
   157004  GCTG *  5  18/20    GCTG GCTG GCTG GCTG GTTA
   167547  TGTT *  5  18/20    TGTT TACT TGTT TGTT TGTT
   185118  GTTG *  5  18/20    GTTG ATTG GTTG ATTG GTTG
   208213  GTAC *  5  18/20    GTAC ATAC GTAC ATAC GTAC
   210450  ATGA *  5  18/20    ATGA ATGA ATGA ATGA GTGC
   211893  ACAG *  5  18/20    ACAG ACGG ATAG ACAG ACAG
   219936  ACCA *  5  18/20    ACCA ACTA ACCA ACCA ACCG
   229616  GACA *  7  26/28    GACA GACA GACA GGCA GGCA GACA GACA
   235059  CACG *  5  19/20    CACG CACG CACG CATG CACG
   236306  CTCA *  5  18/20    CTCA CACA CTCA CTCA CTCT
   248206  TGGC *  5  19/20    TGGC TGGC TGCC TGGC TGGC
   258459  ATTT *  5  18/20    ATTT ACTT ATTT ATTT TTTT
   260128  ATAC *  8  29/32    ATAC ATGC ATAC ATAC ATAC ATAC AAAC ATAT
   279475  TTGT *  5  18/20    TTGT TTGT TTGT TTGT TTTC
-----------------------------------------------------------------------------
 Total sequence length.........................       282588 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       25 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATAC-1    ATTT-2    ATGA-1    ATCC-1    ACAG-1    ACCA-1    TATT-1    TACA-2    
 TTGT-1    TGTA-1    TGTT-2    TGGC-1    TCAT-1    GACA-1    GTAC-1    GTTT-1    
 GTTG-1    GTCC-1    GCTG-1    CACG-1    CTCA-1    CCAC-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7302706|gb|AE003802.1|AE003802 Drosophila melanogaster genomic scaffold 142000013386047 section 12 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    40336  GTCA *  5  18/20    GTCA GTCA GTCG GTCA CTCA
    72191  CTGG * 11  40/44    CTGG CTGG CTGG CTGA CTGG CTGA CTGG CTAG CTGG TTGG CTGG
   122938  GCCA *  8  29/32    GCCA GCCA GCCA TCCA ACCA GCCA GCCA GGCA
   123529  CTTT *  5  18/20    CTTT GCTT CTTT CTTT CTTT
   148559  GAAT *  5  18/20    GAAT GTAT AAAT GAAT GAAT
   157328  ACGT *  6  22/24    ACGT ACGT ACGT ACGT ACAT ACAT
   218252  AATC *  5  18/20    AATC AATC AATC AATC AAAA
   220783  TTTA *  6  22/24    TTTA TTTG TTTA TTTA TTTA TTTT
-----------------------------------------------------------------------------
 Total sequence length.........................       262401 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       8 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AATC-1    ACGT-1    TTTA-1    GAAT-1    GTCA-1    GCCA-1    CTTT-1    CTGG-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7302679|gb|AE003801.1|AE003801 Drosophila melanogaster genomic scaffold 142000013386047 section 11 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    14493  ACCA *  5  18/20    ACCA ACCA ACCA ACCA GCCG
    35320  GGCT *  8  29/32    GGCT GGCT GGCT GGCA GGTT GGCT GGCT GGCA
    66602  CTGA *  5  18/20    CTGA CTGA CTGG CTGA CTGG
    69772  CACC *  5  18/20    CACC CACA CACC CACA CACC
    69796  CACC *  5  18/20    CACC CACA CACC CACA CACC
    84380  GTGG *  6  22/24    GTGG GTGT GTGG GTGG GTGT GTGG
    93105  TTTG *  5  18/20    TTTG TTTG TTTG TTTG TCTA
    94817  ACAT *  6  22/24    ACAT ACAT ACAT ACAT GCGT ACAT
   101915  TATG *  5  18/20    TATG TATG TACA TATG TATG
   124699  GCCA *  5  19/20    GCCA GCCA GCCA GGCA GCCA
   168672  CTTC *  5  19/20    CTTC CTTC CTTC CTTC CTGC
   202490  CATA *  5  18/20    CATA CATA TGTA CATA CATA
   226025  TTTG *  5  18/20    TTTG TGTG TTTG TCTG TTTG
   233219  TTGG *  7  27/28    TTGG TTGG TTGG TTGG TTGG TTGG CTGG
   240558  ATAA *  5  18/20    ATAA ATAA ATAA ATGC ATAA
   240762  ACAT *  5  18/20    ACAT ACAT GCAT ACAT ATAT
   257651  GACC *  5  18/20    GACC GACC AACC GACC GATC
   261177  GACA *  5  19/20    GACA GACA GACA GACG GACA
   265620  AACA *  6  22/24    AACA AACC AACA AACA AACA AAAA
-----------------------------------------------------------------------------
 Total sequence length.........................       272650 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       19 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AACA-1    ATAA-1    ACAT-2    ACCA-1    TATG-1    TTTG-2    TTGG-1    GACA-1    
 GACC-1    GTGG-1    GGCT-1    GCCA-1    CATA-1    CACC-2    CTTC-1    CTGA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7302632|gb|AE003800.1|AE003800 Drosophila melanogaster genomic scaffold 142000013386047 section 10 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

     1684  ACAG *  6  22/24    ACAG ACAG ACAG ACAG ACGG ACTG
     3625  GGTG *  5  18/20    GGTG GGTA GGTG GGTG GGGG
     8390  CATA *  5  18/20    CATA CGTA CATA CATA TATA
    10821  TGGC *  5  18/20    TGGC TCGC TGGC TGAC TGGC
    10997  TTGG *  6  23/24    TTGG TTGG TTGG TTGG TTGG TTGC
    17260  GTAT *  6  22/24    GTAT GTAT GTAC GTAT GTAT GTGT
    17680  ATGT *  5  19/20    ATGT ATGT ATGT AGGT ATGT
    24806  TATG *  5  18/20    TATG TATG CATA TATG TATG
    40518  CTGC *  5  18/20    CTGC CTGC CTGC CTGC CTTT
    49338  CTTT *  5  18/20    CTTT TTTT CTTT TTTT CTTT
    78351  CCAT *  7  26/28    CCAT CCAT CCAT CCAT CCAT CCAT CTAC
    93390  GGAT *  5  19/20    GGAT GGAT GGAT GGAT GGTT
    93428  TTGG *  5  18/20    TTGG TTGG ATGG ATGG TTGG
   100977  AGGC *  8  29/32    AGGC AGGC TGGC AGGC AGGC AGGC AGGC AGAA
   107200  GTTT *  5  18/20    GTTT GTTT GTTT GTTT GCTG
   107546  GTTT *  5  18/20    GTTT GTTT GTTT GTAC GTTT
   115517  TAAA *  5  18/20    TAAA TAAA TAAA TGAA TTAA
   141958  CAGC *  6  22/24    CAGC CAGC CAGC CAGC CAGT CATC
   193986  TTTG *  5  18/20    TTTG TTTG TTTG TTTT TTTT
   194684  TTTC *  5  18/20    TTTC TTTC TTTC TTTC TATT
   199417  GTCT *  5  18/20    GTCT CTCT GTCT GTGT GTCT
   215645  TATG *  5  18/20    TATG TATG TATG TATA TAGG
   245267  CCAC *  5  18/20    CCAC CCAC ACAC CAAC CCAC
-----------------------------------------------------------------------------
 Total sequence length.........................       267271 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       23 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATGT-1    AGGC-1    ACAG-1    TAAA-1    TATG-2    TTTG-1    TTTC-1    TTGG-2    
 TGGC-1    GTAT-1    GTTT-2    GTCT-1    GGAT-1    GGTG-1    CATA-1    CAGC-1    
 CTTT-1    CTGC-1    CCAT-1    CCAC-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7302581|gb|AE003799.1|AE003799 Drosophila melanogaster genomic scaffold 142000013386047 section 9 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    29389  AGTC *  6  22/24    AGTC AGTC AGGC AGTC AGTT AGTC
    62441  AGTG *  5  18/20    AGTG GGTA AGTG AGTG AGTG
    79354  TGTT *  8  29/32    TGTT TGTT TGTT TGTT TGTT TGTT TGTG CGTC
    80988  ACAT *  5  18/20    ACAT ACAC ACAT ACAT ATAT
   152589  AAAC *  5  18/20    AAAC AAAC AATC AAAT AAAC
   183632  GCCT *  5  18/20    GCCT GGCT GCCT GCCT GCCC
   190521  GATA *  5  18/20    GATA GATA GATA GATA GAGT
   192804  CGAA *  5  18/20    CGAA CAAA TGAA CGAA CGAA
   204130  GTTA *  5  19/20    GTTA GTTA GTTG GTTA GTTA
   230027  TAAA *  5  18/20    TAAA TAAA AAAA TAAA TTAA
   255569  ACAT *  5  18/20    ACAT ACAT ACAT GCGT ACAT
   268154  AAAT *  5  18/20    AAAT AAAT AAAT AAAT ATAA
   271242  TGTA *  5  18/20    TGTA TGGA TGTA TGTA TGTG
-----------------------------------------------------------------------------
 Total sequence length.........................       277015 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       13 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AAAC-1    AGTG-1    AGTC-1    ACAT-2    TAAA-1    TGTA-1    TGTT-1    
 GATA-1    GTTA-1    GCCT-1    CGAA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7302535|gb|AE003798.1|AE003798 Drosophila melanogaster genomic scaffold 142000013386047 section 8 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

     2844  GACT *  5  18/20    GACT GACA GACT AACT GACT
     6035  CTGG *  6  24/24    CTGG CTGG CTGG CTGG CTGG CTGG
    12850  ATAA *  6  22/24    ATAA ATAA GCAA ATAA ATAA ATAA
    25354  CAAA *  5  18/20    CAAA CAAA AAAA AAAA CAAA
    35290  TACA *  5  19/20    TACA TACA TACA TACA TACC
    93410  AAAG *  5  19/20    AAAG AAAG AAAG AAAG AAAC
   113533  AAAT *  5  19/20    AAAT AAAT AAAT AAAT AATT
   117575  CTTA *  5  19/20    CTTA CTTA ATTA CTTA CTTA
   192010  ATGG *  5  19/20    ATGG ATGG ATGG ATGG ATGA
   194153  CACC *  5  18/20    CACC CAAC CACC CACC CACT
   212237  GTCC *  5  18/20    GTCC GTAC GTCC GTCC GTCG
   220202  TCCA *  5  19/20    TCCA TCCA TTCA TCCA TCCA
   221050  TAAA *  5  18/20    TAAA TAAG TAGA TAAA TAAA
   255688  ACCA *  6  22/24    ACCA ACCA ACCA ACCG ATCA ACCA
-----------------------------------------------------------------------------
 Total sequence length.........................       261090 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       14 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AAAG-1    ATAA-1    ATGG-1    ACCA-1    TAAA-1    TACA-1    TCCA-1    
 GACT-1    GTCC-1    CAAA-1    CACC-1    CTTA-1    CTGG-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7302512|gb|AE003797.1|AE003797 Drosophila melanogaster genomic scaffold 142000013386047 section 7 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    12024  TATT *  5  18/20    TATT TATT TATT TATT TCAT
   109121  ATAA *  5  18/20    ATAA AAAA ATAA ATAA ATGA
   146480  CATA *  5  18/20    CATA CATA CATA CATA CCAA
   155752  ACAT *  5  18/20    ACAT ATAT ACAT ATAT ACAT
   157680  ACAT *  5  18/20    ACAT ACAT ACAT ATAT ATAT
   178625  ATAG *  5  18/20    ATAG TTAG ATAG ATAG ATAT
   202686  ATAC *  5  18/20    ATAC ATAC ATTC ATAC ATGC
   219038  TATG *  5  18/20    TATG TATG TATG TATA TATA
   249603  GCTG *  5  18/20    GCTG GCTG GTTG GTTG GCTG
-----------------------------------------------------------------------------
 Total sequence length.........................       287859 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       9 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATAA-1    ATAG-1    ATAC-1    ACAT-2    TATT-1    TATG-1    GCTG-1    CATA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7302472|gb|AE003796.1|AE003796 Drosophila melanogaster genomic scaffold 142000013386047 section 6 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    32816  ACTG *  5  18/20    ACTG ACTG ACTG AGTG ACTT
    49474  ACAA *  6  22/24    ACAA ACAA ACAA ACAA AAAA AAAA
    78132  TAAT *  6  23/24    TAAT TAAT TAAT TAAT TAAT AAAT
   110732  TGTT *  6  22/24    TGTT TGTT TGTT TGTT TGTT GTTT
   112477  AGCT *  5  18/20    AGCT AGCT AGCT GGCT AGAT
   138641  ATAC *  5  18/20    ATAC ATAC ATAA ATAT ATAC
   158144  TAAT *  5  18/20    TAAT TAAT TAAT AAAT TATT
   177367  CTAT *  5  18/20    CTAT CTAT CTAT CTAT TTCT
   224071  TAAA *  5  19/20    TAAA TAAA TAAA TAAA TGAA
   232322  CCAC *  5  18/20    CCAC CTAA CCAC CCAC CCAC
   232537  TGTA *  5  18/20    TGTA TGTA TGTG TGTA TATA
   265321  ATAA *  5  20/20    ATAA ATAA ATAA ATAA ATAA
-----------------------------------------------------------------------------
 Total sequence length.........................       268420 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       12 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATAA-1    ATAC-1    AGCT-1    ACAA-1    ACTG-1    TAAA-1    TAAT-2    TGTA-1    
 TGTT-1    CTAT-1    CCAC-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7302434|gb|AE003795.1|AE003795 Drosophila melanogaster genomic scaffold 142000013386047 section 5 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    24121  ACCA *  6  22/24    ACCA ACCG ACCA GCCA ACCA ACCA
    26406  TTAT *  5  18/20    TTAT ATAT TTAT TTAT TTAG
    34968  TATG *  5  18/20    TATG TATG TATG TATA TATA
    38700  AACA *  5  18/20    AACA AACA AACA TACA TACA
    38927  GTGC *  5  18/20    GTGC GTGA GTGC GTGC GTGA
    43887  GATG *  5  19/20    GATG GATG GATG AATG GATG
    54767  GGCA *  5  18/20    GGCA GGCA GTCA GGCA GGCT
    57115  TATG *  5  18/20    TATG TATG TATG TGCG TATG
    71858  ATCA *  5  18/20    ATCA ATCA ATCA ATCA GGCA
    81029  TGGC *  8  30/32    TGGC TGGC TGGC TGGC TAGC TGGC TGGC TGGG
    91717  ATTT *  6  22/24    ATTT TTTT TTTT ATTT ATTT ATTT
   100902  CCAT *  6  22/24    CCAT CCAT CCAT CCAT CTAT ACAT
   104145  CTAT *  6  22/24    CTAT CTAT CGAT CTGT CTAT CTAT
   104170  TATC * 14  51/56    TATC TATC TATC TATC TATC TATC TATC TACC TATC TTGC TATC TATC TTTC TATA
   118006  AAGG *  6  22/24    AAGG AAGG AAGG AAGG AAGG CTGG
   136027  TCCG *  5  18/20    TCCG TCCG TCCA TCCG TTCG
   141499  AAAT *  5  18/20    AAAT AAAT AAAT AAAT TAAA
   142465  CCAA * 11  40/44    CCAA ACAA CCAA CCAA CCAA CCAA CCAA CCAA CCAA TCAA CAAC
   171164  CCAC *  5  18/20    CCAC CCAC CCAC CCAC TCGC
   172820  CCAG *  5  19/20    CCAG CCAG CCAA CCAG CCAG
   180976  ATAC *  5  18/20    ATAC TTAC ATAC ACAC ATAC
   224952  TTGG *  6  23/24    TTGG TTGG TTGG TTGG TTGG TTGA
   244746  GCGA *  5  18/20    GCGA GCGA GCGA GCGA GCTT
   257541  AGAC *  5  18/20    AGAC ATAT AGAC AGAC AGAC
-----------------------------------------------------------------------------
 Total sequence length.........................       260400 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       24 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AAGG-1    AACA-1    ATAC-1    ATTT-1    ATCA-1    AGAC-1    ACCA-1    
 TATG-2    TATC-1    TTAT-1    TTGG-1    TGGC-1    TCCG-1    GATG-1    GTGC-1    
 GGCA-1    GCGA-1    CTAT-1    CCAA-1    CCAT-1    CCAG-1    CCAC-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7302424|gb|AE003794.1|AE003794 Drosophila melanogaster genomic scaffold 142000013386047 section 4 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

      887  ATTA *  5  18/20    ATTA ATTA ATTA ATTA TTCA
    13612  TTAT *  5  19/20    TTAT TTAT TTAT TTAT TTAA
    26850  TGAC *  5  19/20    TGAC TGAC TGAC TGGC TGAC
    38938  GTTT *  5  18/20    GTTT TTTT TTTT GTTT GTTT
    40427  TGGT *  9  33/36    TGGT TGGT TAGT TGGT TGGT TGGT TGGT TTGT TTGT
    58108  ACTG * 10  36/40    ACTG ACTG ACTG CCTG ACTG ACTA ACTG ACTA ACTG AGTG
    64316  AGTC *  5  18/20    AGTC AGTC AGTC AGTC GCTC
    64336  ATTC *  5  19/20    ATTC ATTC ATTC ATTC AGTC
   123647  CCAT *  8  30/32    CCAT CTAT CCAT CCAT CCAT CTAT CCAT CCAT
   127052  CAGT *  6  24/24    CAGT CAGT CAGT CAGT CAGT CAGT
   139204  TCGT *  5  19/20    TCGT TCGT TTGT TCGT TCGT
   180828  CCAG *  5  19/20    CCAG CCAT CCAG CCAG CCAG
   188394  TTCT *  5  18/20    TTCT GTCT TTCC TTCT TTCT
   190114  ATGG *  6  22/24    ATGG ATGG ATGG ATGG TTGG TTGG
   196914  CACC *  5  18/20    CACC CACC CAGC CAAC CACC
   218984  CCAG *  5  20/20    CCAG CCAG CCAG CCAG CCAG
-----------------------------------------------------------------------------
 Total sequence length.........................       261083 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       16 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATTA-1    ATTC-1    ATGG-1    AGTC-1    ACTG-1    TTAT-1    TTCT-1    TGAC-1    
 TGGT-1    TCGT-1    GTTT-1    CAGT-1    CACC-1    CCAT-1    CCAG-2    
----------------------------------------------------------------------------


Genomic sequence...
gi|7302408|gb|AE003793.1|AE003793 Drosophila melanogaster genomic scaffold 142000013386047 section 3 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

     6163  TTTG *  5  18/20    TTTG TTTG TTTG TTTG TGCG
    32523  TCCA * 10  38/40    TCCA TCCA TCCA TCCA TCCA TCCA TCCA TCCG TTCA TCCA
    39118  CATA *  5  19/20    CATA CATA CGTA CATA CATA
    54862  GTCC *  5  19/20    GTCC GTCC GTCC GTCT GTCC
    61849  TGAC *  5  18/20    TGAC TGGT TGAC TGAC TGAC
    75706  AGTC *  6  22/24    AGTC AGTC ACTC AGTC ACTC AGTC
    81445  GCCA *  5  18/20    GCCA ACCA ACCA GCCA GCCA
    81465  GTCA *  5  19/20    GTCA GTCA GTCA GTCA GCCA
    83817  CAGA *  6  23/24    CAGA CAGA CAGA CAGA GAGA CAGA
    88223  CAGT *  5  18/20    CAGT CAGT CAGG CAGC CAGT
    88988  CAGT *  5  18/20    CAGT CAGT CAGT TAGA CAGT
   100241  AGGC *  7  26/28    AGGC AGGC ATGC AGGC TGGC AGGC AGGC
   137662  ACCT *  5  19/20    ACCT ACCT ACCT ACCT ACCC
   137741  CGAC *  5  18/20    CGAC CGAT CGAC CGAC CGTC
   159105  GCCA *  8  30/32    GCCA GCCA TCCA GCCA GCCA GTCA GCCA GCCA
   172355  AACA *  5  18/20    AACA AACA GGCA AACA AACA
   176808  TATC *  5  18/20    TATC TATC TATC TGTG TATC
   180819  CGGT *  5  18/20    CGGT CGGT CGGT GGGT CGAT
   240610  ACCG * 11  42/44    ACCG ACCG ACCG ACCG ACCG ACCG ACCG ACCG ACCG ACCG ACTA
-----------------------------------------------------------------------------
 Total sequence length.........................       263693 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       19 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AACA-1    AGTC-1    AGGC-1    ACCT-1    ACCG-1    TATC-1    TTTG-1    TGAC-1    
 TCCA-1    GTCA-1    GTCC-1    GCCA-2    CATA-1    CAGA-1    CAGT-2    CGAC-1    
 CGGT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7302377|gb|AE003792.1|AE003792 Drosophila melanogaster genomic scaffold 142000013386047 section 2 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

     3512  GCCT *  6  22/24    GCCT GCCT GCCT GCTT GCCT GCCA
     5351  GTGC *  5  18/20    GTGC GTGC GTGC GTGT GTGT
     6295  CCCA *  5  18/20    CCCA TCCA CCTA CCCA CCCA
    59210  CTGG *  5  18/20    CTGG CTGC CTGG CTGC CTGG
    88576  CTGA *  8  29/32    CTGA CTGA CTGA CTGA CTGA CTGG CTGG CTGG
    99921  AAAT *  5  18/20    AAAT AAAT AAAT AAAA TAAT
   108888  TGCG *  5  18/20    TGCG TGTG TGCG TGAG TGCG
   109667  GGAA *  5  18/20    GGAA GGAA GGAA GGAT GGAT
   119991  GTTT *  5  19/20    GTTT GTTT GCTT GTTT GTTT
   130050  GTAT *  8  30/32    GTAT GTAT GTAT GTAT GTAT GTAT GTAT ATGT
   133624  TCAG *  5  19/20    TCAG TCAG TCAG TCGG TCAG
   156155  TCAG *  5  18/20    TCAG TCCG TTAG TCAG TCAG
   184810  AGAC *  5  18/20    AGAC AGTC AGTC AGAC AGAC
   220005  ATAG * 11  40/44    ATAG ATAG ATAG ATAG GTAG ATAG GTAG ATAT ATAG ATAG ATGG
   220327  ACTG *  5  18/20    ACTG ACTG ATTG ACTG ACTC
-----------------------------------------------------------------------------
 Total sequence length.........................       261900 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       15 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    ATAG-1    AGAC-1    ACTG-1    TGCG-1    TCAG-2    GTAT-1    GTTT-1    
 GTGC-1    GGAA-1    GCCT-1    CTGA-1    CTGG-1    CCCA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7302331|gb|AE003791.1|AE003791 Drosophila melanogaster genomic scaffold 142000013386047 section 1 of 52, complete sequence
 Position  Repeat    Coverage  Repeat 

    71511  CTGT *  6  22/24    CTGT CTGT CTGT CTGT CTGT CTAC
    76880  GTCT *  6  23/24    GTCT GTCT GTCT GTCT GTTT GTCT
    78432  TGGA *  5  19/20    TGGA TGGA TGGA TGGA TGGG
    92638  CATA *  6  24/24    CATA CATA CATA CATA CATA CATA
   118323  AACA *  5  20/20    AACA AACA AACA AACA AACA
   136460  TAAT *  6  22/24    TAAT TAAT TTAT TAAT TAAT TATT
   147531  GGAT *  6  22/24    GGAT GGAT GGCT GGCT GGAT GGAT
   212238  GTAT *  5  18/20    GTAT ATAT GTAT GTAT GTGT
   251870  TACA *  5  18/20    TACA TACA TACA TATA TAGA
   255486  TCAT *  5  18/20    TCAT TCGT TCAT TCAT TCAG
-----------------------------------------------------------------------------
 Total sequence length.........................       260580 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       10 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AACA-1    TAAT-1    TACA-1    TGGA-1    TCAT-1    GTAT-1    GTCT-1    GGAT-1    
 CATA-1    CTGT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7288937|gb|AE003082.1|AE003082 Drosophila melanogaster genomic scaffold 142000013385249, complete sequence
 Position  Repeat    Coverage  Repeat 

     1165  GACA *  5  18/20    GACA GACA GACA GACA GTGA
     1722  TTTC *  5  19/20    TTTC TTTC TTTC TTTC TTTA
     2849  AATA *  6  22/24    AATA AAAA AAAA AATA AATA AATA
-----------------------------------------------------------------------------
 Total sequence length.........................       20167 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       3 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AATA-1    TTTC-1    GACA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7316096|gb|AE002575.1|AE002575 Drosophila melanogaster genomic scaffold 142000013386038, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       0 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7291893|gb|AE003466.1|AE003466 Drosophila melanogaster genomic scaffold 142000013386038 section 15 of 15, complete sequence
 Position  Repeat    Coverage  Repeat 

   221393  TTTA *  5  18/20    TTTA TTTA TTTA TTTA TTAT
-----------------------------------------------------------------------------
 Total sequence length.........................       283099 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       1 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 TTTA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7291836|gb|AE003465.1|AE003465 Drosophila melanogaster genomic scaffold 142000013386038 section 14 of 15, complete sequence
 Position  Repeat    Coverage  Repeat 

      564  ATTA *  5  20/20    ATTA ATTA ATTA ATTA ATTA
    21504  TGGC * 14  51/56    TGGC TGGC TGGC TGGC TGGC TGGC TGGC TGGC TGGC TGGC TGAC TGGC TGGT GTGG
    49734  CAAC *  5  18/20    CAAC CAAC CAAC CAGC CAAG
    55003  AAAC *  5  18/20    AAAC AAAC AAGC AAAC ACAC
   104703  TAAA *  5  18/20    TAAA TAAA TAAA TATA CAAA
   171584  ACAG *  5  19/20    ACAG ACAG ATAG ACAG ACAG
-----------------------------------------------------------------------------
 Total sequence length.........................       328500 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       6 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAC-1    ATTA-1    ACAG-1    TAAA-1    TGGC-1    CAAC-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7291775|gb|AE003464.1|AE003464 Drosophila melanogaster genomic scaffold 142000013386038 section 13 of 15, complete sequence
 Position  Repeat    Coverage  Repeat 

    18048  GTTG *  5  18/20    GTTG ATCG GTTG GTTG GTTG
   105058  AGGT *  5  18/20    AGGT GGGT AGGT GGGT AGGT
   131377  TGGT *  5  18/20    TGGT TGGA TGGT TGGA TGGT
   136154  GAAA *  5  18/20    GAAA CAAA GAAC GAAA GAAA
   162886  TATG *  6  22/24    TATG TATG TATG TATG TATT TATA
   163229  AACA *  6  23/24    AACA AACA AACA AACA AACA AGCA
   178337  ACAT *  5  18/20    ACAT ACAT ACAT ACAA ATAT
   179831  ACAT *  5  18/20    ACAT ACAC ACAT ACAC ACAT
   181313  AAAC *  5  18/20    AAAC AAGC AAAC AAAA AAAC
   242631  TGTC *  5  18/20    TGTC TGTC TGTC TGTG TGTG
   266460  GCGA *  5  18/20    GCGA GCGA GCGA GAGT GCGA
   270932  TTTG *  5  18/20    TTTG TTTG TGTT TTTG TTTG
   276125  TATT *  5  18/20    TATT TTTT TTTT TATT TATT
   296008  ATAC *  5  18/20    ATAC ATAC GTAC ATAC AGAC
   299734  ACTA *  5  18/20    ACTA ACTA TCTA ACTA TCTA
-----------------------------------------------------------------------------
 Total sequence length.........................       306848 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       15 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAC-1    AACA-1    ATAC-1    AGGT-1    ACAT-2    ACTA-1    TATT-1    TATG-1    
 TTTG-1    TGTC-1    TGGT-1    GAAA-1    GTTG-1    GCGA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7291737|gb|AE003463.1|AE003463 Drosophila melanogaster genomic scaffold 142000013386038 section 12 of 15, complete sequence
 Position  Repeat    Coverage  Repeat 

    20397  TATG *  5  18/20    TATG CGTG TATG TATG TATG
    39119  CCAT *  8  30/32    CCAT CCAT CCAT CTAT CCAA CCAT CCAT CCAT
    52617  CAAA *  5  18/20    CAAA CAAA CAAA TAAA CAAC
    74893  TATT *  5  18/20    TATT TTTT TTTT TATT TATT
    77691  CATC *  6  22/24    CATC CAAC CATC CCTC CATC CATC
    99804  TTTG *  5  18/20    TTTG TTTG TGTT TTTG TTTG
   104995  TATT *  5  18/20    TATT TTTT TTTT TATT TATT
   130572  TTCC *  5  18/20    TTCC CTCC TTCC CTCC TTCC
   140906  CAGT * 15  54/60    CAGT CAGT CAGT CAGT CAGT CAGT CAGT CAGT CAGT CAGC CAGC CAGC CAGT CGGG CATT
   145956  AGAC *  5  18/20    AGAC AGAC AGTC AGTC AGAC
   152660  GTTT *  6  22/24    GTTT GTCT GTTT GTTT GTTT GCTT
   174373  TTAG *  5  19/20    TTAG TTAG TTAG TTAG TTAT
   182165  CTGG *  6  23/24    CTGG CTGG CGGG CTGG CTGG CTGG
   188343  CAAA *  7  26/28    CAAA CAAA CAAA CAAA GAGA CAAA CAAA
   193732  GGTT * 10  36/40    GGTT GGTT GGTT CGTT GTTT GGTT GGTT GGTT GGCT GGAT
   213388  CCTT *  5  18/20    CCTT GCTC CCTT CCTT CCTT
   216309  ACCA *  8  30/32    ACCA GCCA ACCA ACCA ATCA ACCA ACCA ACCA
   239445  AGAT *  5  18/20    AGAT AGAT AGAT AGAT ATAG
   245435  TGTT *  5  19/20    TGTT TGTT TGTT TGTT TGCT
   245987  TGTT *  6  22/24    TGTT TGTT TGTT TGCT TGTT TGTC
   260514  GATC *  5  18/20    GATC GATC GGGC GATC GATC
   273195  TAGA *  5  18/20    TAGA TAGA TAGA TACA TATA
-----------------------------------------------------------------------------
 Total sequence length.........................       299975 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       22 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AGAT-1    AGAC-1    ACCA-1    TATT-2    TATG-1    TAGA-1    TTAG-1    TTTG-1    
 TTCC-1    TGTT-2    GATC-1    GTTT-1    GGTT-1    CAAA-2    CATC-1    CAGT-1    
 CTGG-1    CCAT-1    CCTT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7291637|gb|AE003462.1|AE003462 Drosophila melanogaster genomic scaffold 142000013386038 section 11 of 15, complete sequence
 Position  Repeat    Coverage  Repeat 

    12564  AAAT *  6  22/24    AAAT AAAT AAAT AAAT AACA AAAT
    40411  CCGA *  8  29/32    CCGA CCGA CCAA CCGA CCGA CCGA CCGA AGGA
    50987  TGTT *  6  22/24    TGTT TGTT TGTT TGAT CGTT TGTT
   101617  TGTA *  6  22/24    TGTA TGTA TGTA CGTA TTTA TGTA
   117512  AGTT *  5  18/20    AGTT AGTC ACTT AGTT AGTT
   132885  TGGC *  5  19/20    TGGC TGGC TGGC TGGC GGGC
   137520  TTTG *  5  18/20    TTTG TTTG TGTT TTTG TTTG
   142711  TATT *  5  18/20    TATT TTTT TTTT TATT TATT
   158495  ACAT *  5  19/20    ACAT ACAT ACAT ACGT ACAT
   194565  TGTA *  5  18/20    TGTA TGTA TGTA TGTA AATA
   203937  TATG *  6  22/24    TATG TATG TATG TATG AATG GATG
   204289  CGGA *  5  18/20    CGGA CGGA TGGA CGGA TGGA
   280115  ACAT *  6  22/24    ACAT ACAT ACAT ACAT ACAC ATAT
   297106  GTTG *  6  22/24    GTTG GTTG GATG GATG GTTG GTTG
-----------------------------------------------------------------------------
 Total sequence length.........................       300542 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       14 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AGTT-1    ACAT-2    TATT-1    TATG-1    TTTG-1    TGTA-2    TGTT-1    
 TGGC-1    GTTG-1    CGGA-1    CCGA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7291588|gb|AE003461.1|AE003461 Drosophila melanogaster genomic scaffold 142000013386038 section 10 of 15, complete sequence
 Position  Repeat    Coverage  Repeat 

    16128  AAAT *  5  18/20    AAAT AAAT CTAT AAAT AAAT
    51382  TTTG *  5  18/20    TTTG TTTG TGTT TTTG TTTG
    56573  TATT *  5  18/20    TATT TTTT TTTT TATT TATT
    59534  TCTG *  6  23/24    TCTG TCCG TCTG TCTG TCTG TCTG
    73317  AAAT *  5  18/20    AAAT AATT ACAT AAAT AAAT
    86789  GCGA *  5  18/20    GCGA GCGA GCGA GCGA GCAT
    95593  CTGA *  5  18/20    CTGA CTGA CTGA CTAC CTGA
   105637  TCAG * 13  48/52    TCAG TCAG TCAG TCAG TCAG CCAG CCAG CCAG TCAG TCAG TCAG TCAG TCAA
   108779  AGTG *  5  18/20    AGTG AGTG AGTG AGTG CGAG
   111951  GTCA *  8  30/32    GTCA TTCA GTCA GTCA GTCA GTCA GTCA GCCA
   137864  GACT *  5  20/20    GACT GACT GACT GACT GACT
   145878  CTCG *  6  22/24    CTCG CTCG CTGT CTCG CTCG CTCG
   151544  CATA *  5  18/20    CATA CATA CACA TATA CATA
   152790  ATCT *  5  18/20    ATCT ATCC ATCC ATCT ATCT
   159538  TTTA *  5  18/20    TTTA TTTA TATA TTTA TTCA
   165768  ATCT *  6  23/24    ATCT ATCT ATAT ATCT ATCT ATCT
   171221  TCGA *  5  18/20    TCGA TCGA TCGA TGGA TCGT
   189660  AACC *  6  22/24    AACC AGCC AACC AGCC AACC AACC
   197983  TCGC *  5  18/20    TCGC ACGT TCGC TCGC TCGC
   245907  CAGA *  5  18/20    CAGA CAAA CAGA CACA CAGA
-----------------------------------------------------------------------------
 Total sequence length.........................       298616 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       20 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-2    AACC-1    ATCT-2    AGTG-1    TATT-1    TTTA-1    TTTG-1    TCAG-1    
 TCTG-1    TCGA-1    TCGC-1    GACT-1    GTCA-1    GCGA-1    CATA-1    CAGA-1    
 CTGA-1    CTCG-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7291543|gb|AE003460.1|AE003460 Drosophila melanogaster genomic scaffold 142000013386038 section 9 of 15, complete sequence
 Position  Repeat    Coverage  Repeat 

      720  ATAG *  8  29/32    ATAG ATAG ATAC ATAG ATAT ATAG ATAG ATGG
     1824  TGCG *  5  18/20    TGCG TGCG TGTG TGTG TGCG
    14015  TGTC *  5  19/20    TGTC TGTC TGTC TGTC TATC
    40450  GCTG *  8  30/32    GCTG GCTG GCTG GCTG GCTG GCTG ACTG GATG
   100344  CTGA * 10  37/40    CTGA CTGA CTGA CTGA CTGA CTGA CTGG TTGA CTGA ATGA
   101888  CCAA * 10  36/40    CCAA CCAT CCAT CCAA CCAA CCAA CCAA CCAA CCAA CTGA
   121907  TCAG *  5  18/20    TCAG TCGG TTAG TCAG TCAG
   160798  TATG *  5  18/20    TATG TACA TATG TATG TATG
   195474  TAGA *  5  18/20    TAGA TAGG CAGA TAGA TAGA
   241894  GCTG *  6  23/24    GCTG GCTA GCTG GCTG GCTG GCTG
   245712  CTCG *  5  18/20    CTCG CTCG CCCT CTCG CTCG
   250950  TTAT *  5  18/20    TTAT TTAT TTAT TTAG TTTT
   254367  TTGT *  6  22/24    TTGT TTGT TTGT TTGT TTTT TTTT
   271179  AAAT *  5  18/20    AAAT AAAT AAAT AAAT ACTT
   283192  CTCA *  5  18/20    CTCA GTCA CTCA GTCA CTCA
   283217  TCAG * 10  36/40    TCAG TCAG TCAG TCAG TCAG TGAG TCAG TCAG TTGG CCAG
   285272  CTGG *  5  18/20    CTGG CAGG CTGG CGGG CTGG
   287667  ATAG *  5  20/20    ATAG ATAG ATAG ATAG ATAG
-----------------------------------------------------------------------------
 Total sequence length.........................       297907 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       18 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    ATAG-2    TATG-1    TAGA-1    TTAT-1    TTGT-1    TGTC-1    TGCG-1    
 TCAG-2    GCTG-2    CTGA-1    CTGG-1    CTCA-1    CTCG-1    CCAA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7291495|gb|AE003459.1|AE003459 Drosophila melanogaster genomic scaffold 142000013386038 section 8 of 15, complete sequence
 Position  Repeat    Coverage  Repeat 

    19278  TTGT *  5  18/20    TTGT TTGT TTGT TCGC TTGT
    68149  TCAT *  5  18/20    TCAT TCGT TCAT TTAT TCAT
    69597  GACT *  6  22/24    GACT GAGT GACT GACT GGCT GACT
    77234  CTGA *  8  29/32    CTGA CTGA CTGA ATGG CTGA CTGA CTGA ATGA
    93002  AGTC *  5  18/20    AGTC AGGC AGTC AGGC AGTC
   108416  CATC *  5  18/20    CATC CAAC CATC CAGC CATC
   115063  ACAA *  5  18/20    ACAA ATAA ACAA ACAA ACAG
   124589  GGAG *  5  18/20    GGAG GGAG GGAG GGGA GGAG
   126146  ATGT *  6  22/24    ATGT ATGT ATGT ATGT GTGT ATGG
   132725  GACG *  5  18/20    GACG GACG GACG GACG GAGA
   135992  GTCG *  5  19/20    GTCG GTTG GTCG GTCG GTCG
   137610  GATG * 10  36/40    GATG GATG GATG GATG GTTG GATG GTTG GATG GTTG GTTG
   145680  AATG *  5  18/20    AATG ATTG AATG CATG AATG
   150217  CAAA *  6  22/24    CAAA CAAA CAAA CAGA CCAA CAAA
   152293  CTGG *  5  18/20    CTGG ATGG CTGG TTGG CTGG
   160215  ATAC *  5  19/20    ATAC ATAC ATAC ATAC ATAT
   166727  ATAG *  5  19/20    ATAG ATAG ATAG ATAG ATAA
   167499  GACG *  6  23/24    GACG GACG GACG GACG GACG GACT
   169906  CAGA *  5  20/20    CAGA CAGA CAGA CAGA CAGA
   191332  TTTA *  5  18/20    TTTA TTTA TTTA TGTA TTAA
   275459  TTTG *  5  19/20    TTTG TTTG TTTG TTTG TTTT
   277395  CTGA *  5  18/20    CTGA CTCA CTGA CTGG CTGA
   281632  CCAT *  7  26/28    CCAT CCAT CCAT TCGT CCAT CCAT CCAT
   292829  AATT *  5  18/20    AATT AATT AATT GATC AATT
   298003  TATT *  6  22/24    TATT TATT TATT TATT TATT TGCT
-----------------------------------------------------------------------------
 Total sequence length.........................       299572 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       25 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AATT-1    AATG-1    ATAG-1    ATAC-1    ATGT-1    AGTC-1    ACAA-1    TATT-1    
 TTTA-1    TTTG-1    TTGT-1    TCAT-1    GATG-1    GACT-1    GACG-2    GTCG-1    
 GGAG-1    CAAA-1    CATC-1    CAGA-1    CTGA-2    CTGG-1    CCAT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7291432|gb|AE003458.1|AE003458 Drosophila melanogaster genomic scaffold 142000013386038 section 7 of 15, complete sequence
 Position  Repeat    Coverage  Repeat 

    10703  CCGT *  5  20/20    CCGT CCGT CCGT CCGT CCGT
    32882  GTCA *  5  18/20    GTCA CTCT GTCA GTCA GTCA
    32904  CAGC *  5  18/20    CAGC CAGT CAGA CAGC CAGC
    99074  CAGG *  5  19/20    CAGG CTGG CAGG CAGG CAGG
   178939  TCTT *  5  18/20    TCTT TCTT TCTT TCTG ACTT
   193620  GAGC *  5  18/20    GAGC GAGC GAGC GAGT GAGT
   242444  CTAT *  6  22/24    CTAT CTTT CTAT CTGT CTAT CTAT
   295543  CCAA *  6  22/24    CCAA CCAA CCAA CTAA CCAA CCAT
-----------------------------------------------------------------------------
 Total sequence length.........................       300917 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       8 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 TCTT-1    GAGC-1    GTCA-1    CAGG-1    CAGC-1    CTAT-1    CCAA-1    CCGT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7291400|gb|AE003457.1|AE003457 Drosophila melanogaster genomic scaffold 142000013386038 section 6 of 15, complete sequence
 Position  Repeat    Coverage  Repeat 

    14123  TCAT *  5  18/20    TCAT TGAT TCAT TCAG TCAT
    19805  CTGG *  5  19/20    CTGG CTGG CTGA CTGG CTGG
    24641  TGAC *  5  18/20    TGAC TCAC TGAC TGAT TGAC
    32198  CTGC *  5  18/20    CTGC CTGT CTGC CTGG CTGC
    33643  ATAC *  5  18/20    ATAC AGAC ATAT ATAC ATAC
    75872  AATG *  6  22/24    AATG AATG AAGG ATTG AATG AATG
    78574  TCAG *  5  19/20    TCAG TCAG TCAG TCAG TCAC
    78604  CCAC *  5  18/20    CCAC CAAA CCAC CCAC CCAC
    97406  TACA *  5  19/20    TACA TACA TACA TACA CACA
   112700  ACAA *  5  18/20    ACAA ACAA ACAA ACAA TTAA
   128530  ACAT *  5  18/20    ACAT ACAT ACAT ACAT AATT
   130735  ATTT *  5  18/20    ATTT ATTT ATTA ATTT ATAT
   168241  ACCG * 11  41/44    ACCG ACCG AGCG ACCG ACCG ACCG ACCG ACCG ACCG ACTG ACTG
   175402  TAAA *  5  18/20    TAAA TAAA TAAA TATA AAAA
   233706  TGGA *  5  18/20    TGGA TGGA TGGA CGGT TGGA
   243491  GCTC *  5  18/20    GCTC GCTC GCTC GGTT GCTC
   263211  TTTA *  5  18/20    TTTA TTTA TTTA TTTA TTGT
   289718  ATAA *  5  18/20    ATAA ATAA ATAA ATAA ATTC
-----------------------------------------------------------------------------
 Total sequence length.........................       290792 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       18 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AATG-1    ATAA-1    ATAC-1    ATTT-1    ACAA-1    ACAT-1    ACCG-1    TAAA-1    
 TACA-1    TTTA-1    TGAC-1    TGGA-1    TCAT-1    TCAG-1    GCTC-1    CTGG-1    
 CTGC-1    CCAC-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7291355|gb|AE003456.1|AE003456 Drosophila melanogaster genomic scaffold 142000013386038 section 5 of 15, complete sequence
 Position  Repeat    Coverage  Repeat 

    19958  CGCT *  5  20/20    CGCT CGCT CGCT CGCT CGCT
    55162  GTTA *  5  18/20    GTTA GTTA GTAG GTTA GTTA
    55182  GGTT *  5  19/20    GGTT GGTT GGTT GGTT GGCT
    56982  AGAA *  5  18/20    AGAA AGAG AGAA AGAA ACAA
    72087  AAAC *  5  18/20    AAAC AAAC CAAC AAAC AAAT
    97835  TGGA *  6  23/24    TGGA TGTA TGGA TGGA TGGA TGGA
   150219  GATA *  5  18/20    GATA GATA GATA GATA TAAA
   155298  TGTT *  5  18/20    TGTT TCTT TGTT TGTT TCTT
   188831  AACC *  6  22/24    AACC AAGC AACT AACC AACC AACC
   250524  CGAG *  5  18/20    CGAG CAAG AGAG CGAG CGAG
   258703  CATT *  6  22/24    CATT CATT CGCT CATT CATT CATT
   262911  TACA *  6  22/24    TACA AACA TACA TACA CACA TACA
   272679  GTGG *  6  22/24    GTGG GTGG GTGG TTGG CTGG GTGG
   294700  TAAA *  5  18/20    TAAA TAAT TAAA TAAA TACA
-----------------------------------------------------------------------------
 Total sequence length.........................       298464 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       14 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAC-1    AACC-1    AGAA-1    TAAA-1    TACA-1    TGTT-1    TGGA-1    GATA-1    
 GTTA-1    GTGG-1    GGTT-1    CATT-1    CGAG-1    CGCT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7291326|gb|AE003455.1|AE003455 Drosophila melanogaster genomic scaffold 142000013386038 section 4 of 15, complete sequence
 Position  Repeat    Coverage  Repeat 

    18906  ACAT *  5  18/20    ACAT ACAT ACAT ATGT ACAT
    22205  ATAC *  5  19/20    ATAC ATAC ATAC ATAC ATAA
    70654  ATTA *  5  18/20    ATTA ATCA ATTA ATTA AGTA
    95241  TTTG *  5  18/20    TTTG TTTT TTTG TTTG TTTC
   142169  TCGA *  5  18/20    TCGA GCAA TCGA TCGA TCGA
   153307  TATG *  5  18/20    TATG TATG TATA TATG TAGG
   204518  GTTT *  5  18/20    GTTT GTAT GTTT GTAT GTTT
   204844  TTAA *  5  18/20    TTAA TTAA TTAG TTAA TTAC
   210937  TGTA *  5  19/20    TGTA TGTA TGTA TGTA TGTG
   215725  GTCA *  7  26/28    GTCA GTCA GTCA GCCA GTCA GTCA CTCA
   224839  TTAT *  5  18/20    TTAT TTAT TTAT TTAT TTTA
   238941  TGAA *  7  26/28    TGAA TGAA TGAA TGAA TGAA TGAA TGGC
   248146  CTGC *  6  23/24    CTGC CTGC CTGC CTGC CTGG CTGC
   249861  TAGT *  5  19/20    TAGT TAGT AAGT TAGT TAGT
   257323  AAAC *  5  18/20    AAAC AAAA AAAA AAAC AAAC
   272373  AAAT *  5  18/20    AAAT AAAT CAAG AAAT AAAT
   274392  CTGG *  7  27/28    CTGG CTGG CTGG CTGG CTGG CTGG TTGG
   283666  TTTA *  5  18/20    TTTA TTTA TTTA TTTT TTAA
   293498  GGTT *  5  18/20    GGTT GGTC GGTT GGGT GGTT
-----------------------------------------------------------------------------
 Total sequence length.........................       302502 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       19 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AAAC-1    ATAC-1    ATTA-1    ACAT-1    TATG-1    TAGT-1    TTAA-1    
 TTAT-1    TTTA-1    TTTG-1    TGAA-1    TGTA-1    TCGA-1    GTTT-1    GTCA-1    
 GGTT-1    CTGG-1    CTGC-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7291292|gb|AE003454.1|AE003454 Drosophila melanogaster genomic scaffold 142000013386038 section 3 of 15, complete sequence
 Position  Repeat    Coverage  Repeat 

     6176  ACTA *  5  18/20    ACTA ACTA ACTA CCAA ACTA
    17881  CATC *  7  26/28    CATC CATC CATC CGTC CATC TATC CATC
    17965  TCAG *  8  29/32    TCAG TCAG TCAG TCAG TCAG TCAG CCAG GCAA
    37734  TGCC *  7  27/28    TGCC TGAC TGCC TGCC TGCC TGCC TGCC
    50880  GAAA *  5  19/20    GAAA GAAA AAAA GAAA GAAA
    58229  TGCG *  5  18/20    TGCG TGTG TGCG TGTG TGCG
    65145  ATAC *  9  33/36    ATAC ATAC ATAC ATAC ATAC ATAC ATAT GTAC ATAA
    78424  CAAA *  5  18/20    CAAA GAAA CAAA GAAA CAAA
    79913  GAAA *  5  18/20    GAAA GAAA AAAA GAAA AAAA
    86006  TATG *  5  19/20    TATG TATG TATG TATG TATT
    86091  ACAT *  5  18/20    ACAT ACAT ACAG ACAG ACAT
    88979  AACA *  6  22/24    AACA AACA AACA AACA AACA GGCA
   127337  ATTG * 11  40/44    ATTG ATTG ATTG ATTG ATTG ATTG GTTG ATTG ATTG ATTG TGTT
   137631  TATG *  6  23/24    TATG TATG TATG TATA TATG TATG
   157969  CACT *  6  22/24    CACT CACG CACA CACT CACT CACT
   159723  TGGC *  5  18/20    TGGC TGCT TGGC TGGC TGGC
   160062  GTAT *  6  22/24    GTAT GTAT GTAT GTAT GTAT GGCT
   177585  TGGC *  6  22/24    TGGC TGCC TGGC TGGC TGGA TGGC
   180310  CAAA *  5  18/20    CAAA CAAA CAGG CAAA CAAA
   180819  GACG *  6  22/24    GACG GACC GATG GACG GACG GACG
   185111  CATC *  5  18/20    CATC CATC CGTC CACC CATC
   191657  GGAG *  7  26/28    GGAG GGAG GAAG GGAG GGAG GGAG GTAG
   200892  TAAT *  5  18/20    TAAT TAAT TGAA TAAT TAAT
   210175  TCCG *  5  18/20    TCCG TCCG TCCA TCCG TCTG
   214438  CCAG *  5  18/20    CCAG CCAG CCAT CCAG TCAG
   224997  GATC *  6  22/24    GATC GAGC GATC GATC AATC GATC
   273079  GCTC *  5  18/20    GCTC GCTC GCTC GCTG GCAC
   281225  TACA *  5  18/20    TACA TACA TATG TACA TACA
-----------------------------------------------------------------------------
 Total sequence length.........................       300941 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       28 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AACA-1    ATAC-1    ATTG-1    ACAT-1    ACTA-1    TAAT-1    TATG-2    TACA-1    
 TGGC-2    TGCG-1    TGCC-1    TCAG-1    TCCG-1    GAAA-2    GATC-1    GACG-1    
 GTAT-1    GGAG-1    GCTC-1    CAAA-2    CATC-2    CACT-1    CCAG-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7291238|gb|AE003453.1|AE003453 Drosophila melanogaster genomic scaffold 142000013386038 section 2 of 15, complete sequence
 Position  Repeat    Coverage  Repeat 

    21705  CACC *  5  19/20    CACC CATC CACC CACC CACC
    29098  AAAC *  6  22/24    AAAC AAAC AAAC AAAC AAAC AAGG
    66163  ATAA *  5  18/20    ATAA ATAT ATAA ATAT ATAA
    66187  ATAA *  5  18/20    ATAA ATAT ATAA ATAT ATAA
    66211  ATAA *  5  18/20    ATAA ATAT ATAA ATAT ATAA
    66235  ATAA *  5  18/20    ATAA ATAT ATAA ATAT ATAA
    66259  ATAA *  5  18/20    ATAA ATAT ATAA ATAT ATAA
    66283  ATAA *  5  18/20    ATAA ATAT ATAA ATAT ATAA
    66323  ATAA *  5  18/20    ATAA ATAT ATAA ATAT ATAA
    66347  ATAA *  5  18/20    ATAA ATAT ATAA ATAT ATAA
    66371  ATAA *  5  18/20    ATAA ATAT ATAA ATAT ATAA
    66395  ATAA *  5  18/20    ATAA ATAT ATAA ATAT ATAA
    66419  ATAA *  5  18/20    ATAA ATAT ATAA ATAT ATAA
    66443  ATAA *  5  18/20    ATAA ATAT ATAA ATAT ATAA
   112404  TTAG *  6  22/24    TTAG TTGC TTAG TTAG TTAG TTAG
   119166  TATT *  5  18/20    TATT TATT TATT TATT TAGC
   142914  TAAA *  5  18/20    TAAA TAAA GGAA TAAA TAAA
   151497  ACAT *  5  18/20    ACAT ACAT ACAT ACAT ATCT
   171060  GTAG *  5  18/20    GTAG GTAG GTAG GCAG GCAG
   183476  GCAG *  5  18/20    GCAG TCAG GCAG GCAG CCAG
   189960  CCTG *  5  18/20    CCTG GCTG CCTG ACTG CCTG
   254602  TCAG *  6  23/24    TCAG TCAG TCAG TCAG TCAA TCAG
   275613  CGAT *  5  19/20    CGAT CGAT CGAT CGAT CGGT
   277365  TATG *  5  18/20    TATG TATG TATG TACA TATG
   282488  GGCT *  5  18/20    GGCT GGCT GGCT GACT GGAT
   289427  CAAA *  5  18/20    CAAA CAAA CAAA CAAA AACA
-----------------------------------------------------------------------------
 Total sequence length.........................       302547 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       26 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAC-1    ATAA-12   ACAT-1    TAAA-1    TATT-1    TATG-1    TTAG-1    TCAG-1    
 GTAG-1    GGCT-1    GCAG-1    CAAA-1    CACC-1    CGAT-1    CCTG-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7291191|gb|AE003452.1|AE003452 Drosophila melanogaster genomic scaffold 142000013386038 section 1 of 15, complete sequence
 Position  Repeat    Coverage  Repeat 

    12709  AGCC *  5  18/20    AGCC AACC AGCC AGCC AGGC
    12781  ATGT *  5  18/20    ATGT AAAT ATGT ATGT ATGT
    18953  CATT *  5  19/20    CATT CATT CATT CGTT CATT
    43291  CTGG *  5  18/20    CTGG CTGG CTGG CTGG GTTG
    71271  TACG *  5  18/20    TACG TACG TACG TACG TAAA
   142893  ATAA *  5  18/20    ATAA ATAA ATAA ACAA ATAC
   152462  ACAT *  5  19/20    ACAT GCAT ACAT ACAT ACAT
   263600  GTTT *  5  18/20    GTTT TTTT GTTT TTTT GTTT
   294939  GTAT *  6  22/24    GTAT GTAT GTAT GTAT GTAC ATAT
-----------------------------------------------------------------------------
 Total sequence length.........................       305505 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       9 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATAA-1    ATGT-1    AGCC-1    ACAT-1    TACG-1    GTAT-1    GTTT-1    CATT-1    
 CTGG-1    
----------------------------------------------------------------------------

 

Tetra-Nucleotide repeats in Drosophila melanogaster Chromosome-Arm-2R Genomic Scaffolds
Minimum tetra-nucleotide repeating units = 5 (allowing a maximum of 10% mismatch)
Total 129 sequences searched with a total of 21068156 bp length
Total 1210 repeats covering 24968 / 27244 base pairs
Length distribution of all tetra-nucleotide repeats 
----------------------------------------------------------------------------------------------------------------------------------------------------
No. of repeat units    5     6     7     8     9    10    11    12    13    14    15    16    17    18    19    20    21    22    23    24     >=25  

total repeats        877   212    27    47    11    14    11     1     5     2     1     0     0     0     0     1     0     0     0     0     1 
----------------------------------------------------------------------------------------------------------------------------------------------------

 Frequency distribution of different tetra-nucleotide repeat classes
 
   31-AAAT   12-AATA   23-ATAA   17-TAAA   13-ATTT   27-TTTA   11-TTAT   25-TATT   =  159 
    4-AAAG    3-AAGA    4-AGAA    4-GAAA    5-CTTT    4-TTTC    4-TTCT    2-TCTT   =   30 
   12-AAAC    9-AACA    7-ACAA   15-CAAA    9-GTTT   17-TTTG    9-TTGT   18-TGTT   =   96 
    4-AATT    8-ATTA    3-TTAA    6-TAAT                                           =   21
    4-AATG    2-ATGA    3-TGAA    1-GAAT    8-CATT    2-ATTC    1-TTCA    5-TCAT   =   26 
    4-AATC    2-ATCA    2-TCAA    3-CAAT    0-GATT    3-ATTG    3-TTGA    2-TGAT   =   19 
    2-AAGT    1-AGTA    0-GTAA    0-TAAG    0-ACTT    1-CTTA    0-TTAC    2-TACT   =    6 
    1-AAGG    3-AGGA    1-GGAA    0-GAAG    1-CCTT    3-CTTC    2-TTCC    1-TCCT   =   12 
    1-AAGC    1-AGCA    0-GCAA    0-CAAG    0-GCTT    0-CTTG    1-TTGC    0-TGCT   =    3 
    1-AACT    2-ACTA    0-CTAA    1-TAAC    4-AGTT    4-GTTA    2-TTAG    1-TAGT   =   15 
    3-AACG    0-ACGA    3-CGAA    1-GAAC    0-CGTT    0-GTTC    0-TTCG    1-TCGT   =    8 
    5-AACC   10-ACCA    6-CCAA    5-CAAC    6-GGTT    5-GTTG    7-TTGG    5-TGGT   =   49 
    8-ATAG    2-TAGA    5-AGAT    6-GATA    7-CTAT   10-TATC    8-ATCT    1-TCTA   =   47 
   45-ATAC   33-TACA   35-ACAT   21-CATA   12-GTAT   50-TATG   15-ATGT   25-TGTA   =  236 
    7-ATGG   10-TGGA   10-GGAT    5-GATG   17-CCAT    8-CATC    2-ATCC    7-TCCA   =   66 
    1-ATGC    0-TGCA    0-GCAT    0-CATG                                           =    1
    1-ATCG    2-TCGA    4-CGAT    4-GATC                                           =   11
    6-AGAC    8-GACA    8-ACAG    9-CAGA    6-GTCT    4-TCTG    4-CTGT    8-TGTC   =   53 
    3-AGTG    5-GTGA    2-TGAG    3-GAGT   10-CACT    1-ACTC    5-CTCA    2-TCAC   =   31 
    5-AGTC   12-GTCA   10-TCAG   13-CAGT    9-GACT    9-ACTG   10-CTGA    7-TGAC   =   75 
    1-AGGT    0-GGTA    1-GTAG    0-TAGG    2-ACCT    0-CCTA    0-CTAC    0-TACC   =    4 
    0-AGGG    0-GGGA    2-GGAG    0-GAGG    0-CCCT    1-CCTC    2-CTCC    0-TCCC   =    5 
    2-AGGC    2-GGCA    3-GCAG    2-CAGG    3-GCCT    4-CCTG    5-CTGC    4-TGCC   =   25 
    3-AGCT    0-GCTA    0-CTAG    0-TAGC                                           =    3
    0-AGCG    5-GCGA    2-CGAG    1-GAGC    1-CGCT    4-GCTC    3-CTCG    1-TCGC   =   17 
    4-AGCC   10-GCCA   10-CCAG    6-CAGC    4-GGCT   10-GCTG   19-CTGG   19-TGGC   =   82 
    1-ACGT    1-CGTA    3-GTAC    1-TACG                                           =    6
    5-ACGG    3-CGGA    6-GGAC    7-GACG    4-CCGT    1-CGTC    8-GTCC    5-TCCG   =   39 
    0-ACGC    1-CGCA    1-GCAC    1-CACG    0-GCGT    2-CGTG    3-GTGC    3-TGCG   =   11 
    4-ACCG    6-CCGA    2-CGAC    2-GACC    2-CGGT    2-GGTC    3-GTCG    0-TCGG   =   21 
    2-ACCC    3-CCCA   10-CCAC    5-CACC    0-GGGT    3-GGTG    6-GTGG    3-TGGG   =   32 
    0-GGGC    0-GGCG    0-GCGG    0-CGGG    0-GCCC    0-CCCG    0-CCGC    0-CGCC   =    0 
    0-GGCC    1-GCCG    0-CCGG    0-CGGC                                           =    1
----------------------------------------------------------------------------------------------------
----------------------------------------------------------------------------------------------------
 Tetra-nucleotide repeats longer than 40 bp (repeated 10 or more times)
 
    0-AAAT    0-AATA    0-ATAA    0-TAAA    0-ATTT    0-TTTA    0-TTAT    0-TATT   =    0 
    0-AAAG    0-AAGA    0-AGAA    0-GAAA    0-CTTT    0-TTTC    0-TTCT    0-TCTT   =    0 
    0-AAAC    0-AACA    0-ACAA    0-CAAA    0-GTTT    0-TTTG    0-TTGT    1-TGTT   =    1 
    0-AATT    1-ATTA    0-TTAA    0-TAAT                                           =    1
    0-AATG    0-ATGA    0-TGAA    0-GAAT    0-CATT    0-ATTC    0-TTCA    0-TCAT   =    0 
    0-AATC    0-ATCA    0-TCAA    0-CAAT    0-GATT    1-ATTG    0-TTGA    0-TGAT   =    1 
    0-AAGT    0-AGTA    0-GTAA    0-TAAG    0-ACTT    0-CTTA    0-TTAC    0-TACT   =    0 
    0-AAGG    0-AGGA    0-GGAA    0-GAAG    0-CCTT    0-CTTC    0-TTCC    0-TCCT   =    0 
    0-AAGC    0-AGCA    0-GCAA    0-CAAG    0-GCTT    0-CTTG    0-TTGC    0-TGCT   =    0 
    0-AACT    0-ACTA    0-CTAA    0-TAAC    1-AGTT    0-GTTA    0-TTAG    0-TAGT   =    1 
    0-AACG    0-ACGA    0-CGAA    0-GAAC    0-CGTT    0-GTTC    0-TTCG    0-TCGT   =    0 
    0-AACC    0-ACCA    2-CCAA    0-CAAC    1-GGTT    0-GTTG    0-TTGG    0-TGGT   =    3 
    1-ATAG    0-TAGA    0-AGAT    0-GATA    0-CTAT    3-TATC    2-ATCT    0-TCTA   =    6 
    0-ATAC    0-TACA    1-ACAT    0-CATA    0-GTAT    0-TATG    1-ATGT    0-TGTA   =    2 
    0-ATGG    1-TGGA    0-GGAT    1-GATG    2-CCAT    0-CATC    0-ATCC    2-TCCA   =    6 
    0-ATGC    0-TGCA    0-GCAT    0-CATG                                           =    0
    0-ATCG    0-TCGA    0-CGAT    0-GATC                                           =    0
    0-AGAC    0-GACA    0-ACAG    0-CAGA    0-GTCT    0-TCTG    1-CTGT    0-TGTC   =    1 
    0-AGTG    0-GTGA    0-TGAG    0-GAGT    0-CACT    0-ACTC    0-CTCA    0-TCAC   =    0 
    0-AGTC    0-GTCA    2-TCAG    1-CAGT    0-GACT    2-ACTG    1-CTGA    0-TGAC   =    6 
    0-AGGT    0-GGTA    0-GTAG    0-TAGG    0-ACCT    0-CCTA    0-CTAC    0-TACC   =    0 
    0-AGGG    0-GGGA    0-GGAG    0-GAGG    0-CCCT    0-CCTC    0-CTCC    0-TCCC   =    0 
    0-AGGC    0-GGCA    0-GCAG    0-CAGG    0-GCCT    1-CCTG    0-CTGC    0-TGCC   =    1 
    0-AGCT    0-GCTA    0-CTAG    0-TAGC                                           =    0
    0-AGCG    0-GCGA    0-CGAG    0-GAGC    0-CGCT    0-GCTC    0-CTCG    0-TCGC   =    0 
    0-AGCC    1-GCCA    0-CCAG    0-CAGC    0-GGCT    0-GCTG    1-CTGG    2-TGGC   =    4 
    0-ACGT    0-CGTA    0-GTAC    0-TACG                                           =    0
    0-ACGG    0-CGGA    0-GGAC    0-GACG    0-CCGT    0-CGTC    0-GTCC    1-TCCG   =    1 
    0-ACGC    0-CGCA    0-GCAC    0-CACG    0-GCGT    0-CGTG    0-GTGC    0-TGCG   =    0 
    2-ACCG    0-CCGA    0-CGAC    0-GACC    0-CGGT    0-GGTC    0-GTCG    0-TCGG   =    2 
    0-ACCC    0-CCCA    0-CCAC    0-CACC    0-GGGT    0-GGTG    0-GTGG    0-TGGG   =    0 
    0-GGGC    0-GGCG    0-GCGG    0-CGGG    0-GCCC    0-CCCG    0-CCGC    0-CGCC   =    0 
    0-GGCC    0-GCCG    0-CCGG    0-CGGC                                           =    0
----------------------------------------------------------------------------------------------------
 Total repeats longer than 40 bp = 36 
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© Division of Biochemical Sciences, National Chemical Laboratory, Pune 411008, INDIA