Tetra-Nucleotide Repeats in Genomic Sequences Tetra-Nucleotide Repeats in
Drosophila melanogaster Chromosome-X Genomic Scaffolds


Genomic sequence...
gi|7289277|gb|AE002611.1|AE002611 Drosophila melanogaster genomic scaffold 142000013385548, complete sequence
 Position  Repeat    Coverage  Repeat 

     1952  ATAC *  5  19/20    ATAC ATAC ATAC ATAC ATAT
     2422  ATAC *  5  18/20    ATAC ATAC AAAC ATAC ATAT
    10917  TATG *  5  18/20    TATG TATG TATG TATT TATA
    24744  TGGC *  5  18/20    TGGC TGGC TGGC TGGG TGGT
    29425  TCAA *  5  18/20    TCAA TCAA ACAG TCAA TCAA
    35039  TGTA *  6  22/24    TGTA TGTA TGTA TGTG TGTA TATA
    51148  ATCA *  5  19/20    ATCA ATCA ATCA ATCA ATCG
    55831  ACAA *  5  18/20    ACAA GCAA ACAA ACAA ACAC
    60466  AGAA *  5  18/20    AGAA AGAA AGAA GGAA AGGA
    63050  GCCA *  5  18/20    GCCA GGCA GCCA GGCA GCCA
    67792  CAGT *  5  18/20    CAGT CAGT CGGT CTGT CAGT
    72714  TTGA *  5  18/20    TTGA TTCC TTGA TTGA TTGA
   100032  TGTC *  6  23/24    TGTC TGTC TGTC TGTC TGTA TGTC
   100833  GGAT *  7  26/28    GGAT GGTT GGAT GGAT GGAT GGAT AGAT
   123993  CAGA *  5  18/20    CAGA CACA CACA CAGA CAGA
   142264  TACA *  5  19/20    TACA TACA TGCA TACA TACA
   148052  GGTG *  5  18/20    GGTG TGTG GGTG TGTG GGTG
   176235  TATG *  5  18/20    TATG TGTG TATG TATG TATA
   188251  GGAT *  5  18/20    GGAT GGAG GGAT GGAT GGTT
   201939  ACGC *  5  18/20    ACGC ACGC ACGC ACAC ACAC
   215904  TATG *  5  18/20    TATG TACA TATG TATG TATG
-----------------------------------------------------------------------------
 Total sequence length.........................       216949 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       21 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATAC-2    ATCA-1    AGAA-1    ACAA-1    ACGC-1    TATG-3    TACA-1    TTGA-1    
 TGTA-1    TGTC-1    TGGC-1    TCAA-1    GGAT-2    GGTG-1    GCCA-1    CAGA-1    
 CAGT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7316095|gb|AE002620.1|AE002620 Drosophila melanogaster genomic scaffold 142000013386037, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       0 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7295611|gb|AE003572.1|AE003572 Drosophila melanogaster genomic scaffold 142000013386037 section 5 of 5, complete sequence
 Position  Repeat    Coverage  Repeat 

    11367  CATC * 10  37/40    CATC CATC CATC CATC CATC CATC CATC TATC TATC TATC
    12173  TTCC *  5  18/20    TTCC TTCC TTCC CTCC TGCC
    15297  ATAC * 10  37/40    ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAT ATGG
    15410  TACT *  5  18/20    TACT TTCT TACT TACT TTCT
    16433  CAAA *  6  22/24    CAAA CAAG CAAA CAAA CAAA CAAG
    31412  ACAT *  5  18/20    ACAT ACAT ATAT ACAT ATAT
    32656  TACA *  5  19/20    TACA TACA TACA TACA TAGA
    38975  GGAT *  5  18/20    GGAT GGAT GGAT GAAT CGAT
    43470  TAAA *  6  22/24    TAAA TAAA TAAA GAAA TAAA AAAA
    47813  ACGG *  5  18/20    ACGG ACGG ACGG ACGG ACAC
    47833  GGAC *  5  18/20    GGAC GGAC GGAC AGAA GGAC
    55988  GCGA *  7  26/28    GCGA ACGA GCGA GCGA GCGA GCGA TCGA
    67070  AAAG *  5  18/20    AAAG ATAG AAAG AAAG AAAT
-----------------------------------------------------------------------------
 Total sequence length.........................       79498 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       13 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAG-1    ATAC-1    ACAT-1    ACGG-1    TAAA-1    TACA-1    TACT-1    TTCC-1    
 GGAT-1    GGAC-1    GCGA-1    CAAA-1    CATC-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7295580|gb|AE003571.1|AE003571 Drosophila melanogaster genomic scaffold 142000013386037 section 4 of 5, complete sequence
 Position  Repeat    Coverage  Repeat 

     8165  GATA *  5  18/20    GATA GATA GATA GATA GAAT
    78765  GGAT *  5  19/20    GGAT GGAT GGAT GGAT AGAT
    87053  GTGG *  6  22/24    GTGG GTGG GTGG GCGA GTGG GTGG
    94716  ACGG *  5  18/20    ACGG ACTG ACGG ACAG ACGG
   101246  TATG *  5  18/20    TATG TATG TATG TACA TATG
   126242  TATG *  5  19/20    TATG TATG TATG TATG CATG
   138132  ATTG *  5  19/20    ATTG ATTG ATTG ATTG ATCG
   138635  TTTA *  5  18/20    TTTA TTTG TTTA TCTA TTTA
   163502  TTTG *  5  18/20    TTTG TTTG TTTG TTTT TTTT
   165261  TACA *  5  18/20    TACA TACG TACA CACA TACA
   167777  TAAA *  6  22/24    TAAA TAAA TAAA TAAA AAAA AAAA
   178088  TATG *  5  19/20    TATG TATG TATG TATG TATT
   249005  ATAA *  5  18/20    ATAA CTAA CTAA ATAA ATAA
   249666  GGCA *  5  18/20    GGCA GCCA GGCA GCCA GGCA
   276527  GTGA *  8  29/32    GTGA GTGA GTGA GTGA GTAA GTGA GTGT GTGC
   280092  GTCA *  5  18/20    GTCA GTCA TTCA GCCA GTCA
   285335  CTGA *  5  18/20    CTGA TTGA CTGA CCGA CTGA
   287916  GCTG *  5  18/20    GCTG GCTG GCTG GCTG GCAT
   294269  GACT *  5  18/20    GACT GTCT GACT GTCT GACT
   295960  ATCC *  5  18/20    ATCC AACC ATCC ACCC ATCC
   298425  AACA *  5  19/20    AACA AACA AACA AACA GACA
-----------------------------------------------------------------------------
 Total sequence length.........................       302246 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       21 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AACA-1    ATAA-1    ATTG-1    ATCC-1    ACGG-1    TAAA-1    TATG-3    TACA-1    
 TTTA-1    TTTG-1    GATA-1    GACT-1    GTGA-1    GTGG-1    GTCA-1    GGAT-1    
 GGCA-1    GCTG-1    CTGA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7295563|gb|AE003570.1|AE003570 Drosophila melanogaster genomic scaffold 142000013386037 section 3 of 5, complete sequence
 Position  Repeat    Coverage  Repeat 

     7180  TGAT *  5  19/20    TGAT TGAT TGAT TGAT GGAT
    13397  GTTG *  6  22/24    GTTG GTCG GTTG GTTG GGTG GTTG
    15117  AGTC *  5  18/20    AGTC ATTC ACTC AGTC AGTC
    61128  CGAA *  5  18/20    CGAA TGAG CGAA CGAA CGAA
    92395  TCAG * 11  41/44    TCAG TCAG TCAG TCAA TCAA TCAG TCAG TCAG TCAG TCAG TCAC
    94574  AAGC *  5  18/20    AAGC AAGT TAGC AAGC AAGC
   112360  TTTC *  5  19/20    TTTC CTTC TTTC TTTC TTTC
   115060  TGTC *  5  19/20    TGTC CGTC TGTC TGTC TGTC
   116950  TGTT *  6  22/24    TGTT TGTA TGTT TGTT TGTT TTTT
   121017  CATA *  5  18/20    CATA CATA TATA CATA TATA
   139094  AAAT *  6  22/24    AAAT AAAT AAAT AAAT AAAT ATAA
   152750  TTTG *  5  19/20    TTTG TTTG TCTG TTTG TTTG
   161772  AAAT *  6  22/24    AAAT AAAT AAAT AAAT ATAT ATAT
   163439  AATA *  5  19/20    AATA AATA AATA AATA AATC
   189550  GGTG *  5  18/20    GGTG GATG GGTG GTTG GGTG
   193058  ATTT *  5  18/20    ATTT ATTT ATTT ATTT ACTC
   213115  GGTT *  5  18/20    GGTT GGGT GGTT GGGT GGTT
   213135  GGGT *  5  18/20    GGGT GGTT GGGT GGTT GGGT
   217937  AGCC *  6  22/24    AGCC AGCC AGTC AGTC AGCC AGCC
   219037  ACGG *  8  29/32    ACGG ACGG ACGG ACGG ACGG ACGG AGCG ACGT
   235290  CATA *  5  18/20    CATA TGTA CATA CATA CATA
   265744  AACA *  5  18/20    AACA AACA AACA AATA GACA
   265774  CAAA *  5  18/20    CAAA CAGA CAAA CATA CAAA
   275621  TAAA *  5  19/20    TAAA TAAA TAAA CAAA TAAA
   277441  ATTA *  5  18/20    ATTA TTTA ATTA ATTA AATA
   289179  AATG *  5  18/20    AATG AATG AACG GATG AATG
-----------------------------------------------------------------------------
 Total sequence length.........................       299012 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       26 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-2    AATA-1    AATG-1    AAGC-1    AACA-1    ATTA-1    ATTT-1    AGTC-1    
 AGCC-1    ACGG-1    TAAA-1    TTTG-1    TTTC-1    TGAT-1    TGTT-1    TGTC-1    
 TCAG-1    GTTG-1    GGTT-1    GGTG-1    GGGT-1    CAAA-1    CATA-2    CGAA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7295529|gb|AE003569.1|AE003569 Drosophila melanogaster genomic scaffold 142000013386037 section 2 of 5, complete sequence
 Position  Repeat    Coverage  Repeat 

    14746  CGGA *  5  18/20    CGGA CGGA CGGA CAGA TGGA
    14768  GACG *  5  18/20    GACG GACA GACG GACT GACG
    17773  TCAA *  6  22/24    TCAA TCAA TCAA TCAA CCAA TCAC
    26260  TGGG *  5  18/20    TGGG TGGG TGTT TGGG TGGG
    28368  AGCT *  6  23/24    AGCT AGCT AGTT AGCT AGCT AGCT
    88495  ATAC *  5  18/20    ATAC ATAC ATAC ATAT GTAC
   194981  AAAT *  5  18/20    AAAT AAAC ACAT AAAT AAAT
   214876  AGAC *  8  29/32    AGAC AGAC AGAC AGAC AGAC AGAT AGAC GGTC
   217974  ATAC *  5  18/20    ATAC ATAC ATAT ATAC ATAT
   225948  TTTG *  5  19/20    TTTG TTTG TTTG TTTG GTTG
   228252  CATC *  5  18/20    CATC CATC CATC CATC TAAC
   245594  TACA *  6  23/24    TACA TACA TACA TACA TACA TGCA
   257366  GTCC *  5  19/20    GTCC GTCC GTCC GTCT GTCC
   290305  CACG *  5  18/20    CACG CACG CACA CACA CACG
-----------------------------------------------------------------------------
 Total sequence length.........................       292406 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       14 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    ATAC-2    AGAC-1    AGCT-1    TACA-1    TTTG-1    TGGG-1    TCAA-1    
 GACG-1    GTCC-1    CATC-1    CACG-1    CGGA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7295493|gb|AE003568.1|AE003568 Drosophila melanogaster genomic scaffold 142000013386037 section 1 of 5, complete sequence
 Position  Repeat    Coverage  Repeat 

    15873  TACA *  5  18/20    TACA TACA TACA TATG TACA
    25906  GGTG *  5  18/20    GGTG GGCG GATG GGTG GGTG
    61801  TAAA *  5  18/20    TAAA TAAA TAAA TAAA ATAA
    70986  CAGA *  5  19/20    CAGA CAGA CAGA CTGA CAGA
   103157  TTAA *  5  18/20    TTAA TCAA TTAA TTTA TTAA
   107149  TATG * 11  40/44    TATG TATG TACG TATG TATG TATG TATG TATG TATG TGCG CATG
   109442  ATGT *  5  18/20    ATGT GTAT ATGT ATGT ATGT
   121204  ACGG *  7  26/28    ACGG ACAG ACGG ACGG ACTG ACGG ACGG
   125183  ATAC *  5  18/20    ATAC ATAT ACAC ATAC ATAC
   135931  TTAT *  5  19/20    TTAT TTAT TCAT TTAT TTAT
   189134  AGGC *  6  22/24    AGGC AGGC AGGC GGGC AGGC AGGA
   191167  CGAT *  6  22/24    CGAT CGAT CAAT CGAT CGAT CAAT
   253619  ATGT *  7  26/28    ATGT ATGT ATGT ATGT ATGT ATGT GTAT
   257922  TTAA *  6  22/24    TTAA CTAA TTAA TTAA TTAA TTTA
   258387  CAAA *  8  30/32    CAAA CAAA CAAA CAAA CAAG CAGA CAAA CAAA
   287002  TGTT *  5  18/20    TGTT TGTT TGTT CGTT CGTT
   287022  CGTT *  5  18/20    CGTT CGTT GGTT CGTT TGTT
-----------------------------------------------------------------------------
 Total sequence length.........................       292926 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       17 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATAC-1    ATGT-2    AGGC-1    ACGG-1    TAAA-1    TATG-1    TACA-1    TTAA-2    
 TTAT-1    TGTT-1    GGTG-1    CAAA-1    CAGA-1    CGAT-1    CGTT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7316092|gb|AE002629.1|AE002629 Drosophila melanogaster genomic scaffold 142000013386033, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       0 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7295629|gb|AE003574.1|AE003574 Drosophila melanogaster genomic scaffold 142000013386033 section 2 of 2, complete sequence
 Position  Repeat    Coverage  Repeat 

    13179  GAAT *  8  29/32    GAAT GAAT GAAT TAAT GAAT GAAT GAAT GATG
    30866  TGTC *  5  18/20    TGTC AGTC TGTC TGTC TGCC
    35081  CTGA *  5  18/20    CTGA ATGA CTGG CTGA CTGA
    35725  TAGA *  5  18/20    TAGA TAGA TATA TAGA AAGA
    43164  ATAC *  8  29/32    ATAC ATAC ATAC ATAC ATAC ATAC ATAG GTCC
    88740  ATGT *  5  18/20    ATGT ACGT ATGT ATGT ATGG
   125110  TATG *  6  22/24    TATG TATG TATG TATG TTTA TATG
   160818  ATAC *  5  19/20    ATAC ATAC ATAC ATAC ATAT
   186954  TGAC *  8  30/32    TGAC TGAC TGAC TGAC TGAT TGAC TGCC TGAC
   193064  TGTA *  5  18/20    TGTA CATA TGTA TGTA TGTA
   203752  CATA *  5  19/20    CATA CATA CATA CATA TATA
   213538  GACA *  5  18/20    GACA GTCG GACA GACA GACA
   215198  CTGT *  5  18/20    CTGT CTGT CTGT TTGT CCGT
   228455  TATT *  5  18/20    TATT TATT TATT CTTT TATT
-----------------------------------------------------------------------------
 Total sequence length.........................       274456 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       14 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATAC-2    ATGT-1    TATT-1    TATG-1    TAGA-1    TGAC-1    TGTA-1    TGTC-1    
 GAAT-1    GACA-1    CATA-1    CTGA-1    CTGT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7295620|gb|AE003573.1|AE003573 Drosophila melanogaster genomic scaffold 142000013386033 section 1 of 2, complete sequence
 Position  Repeat    Coverage  Repeat 

    33315  CCAT *  5  18/20    CCAT CCAT CCAT CCAT CTAC
    43670  TTAA *  5  18/20    TTAA TTAA TAAA TTAC TTAA
    48301  TTTA *  5  18/20    TTTA TTTA TTTA TTTA TTAT
    48328  TTAT *  6  22/24    TTAT TTAT TTAT TTAT TTAT TATT
    98933  GTCC *  5  18/20    GTCC GTCC GTCT ATCC GTCC
   110953  TACA *  6  22/24    TACA TACA TACA TACA TACA TGTA
   113047  TACA *  5  18/20    TACA TACA TACA TACA TAGT
   113459  TGTC *  5  18/20    TGTC CGTC TGTC TGTC CGTC
   125892  TGTA *  5  18/20    TGTA TGTA TGTA TGTA CATA
   128459  ATTT *  6  22/24    ATTT ATTT ATTT ATTG ATTT ACTT
   147506  AATA *  5  20/20    AATA AATA AATA AATA AATA
   166069  TCAA *  5  18/20    TCAA TCAA TCAA TCAG GCAA
   204728  TTAC *  5  18/20    TTAC ATAC ATAC TTAC TTAC
   210612  GTCA * 10  36/40    GTCA GTCA GTCA GTCA GTCA GTCA GTCG GTCA TTCA GGCG
   228440  TAAA *  5  18/20    TAAA TAAA TAAA TAAA TTTA
-----------------------------------------------------------------------------
 Total sequence length.........................       262131 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       15 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AATA-1    ATTT-1    TAAA-1    TACA-2    TTAA-1    TTAT-1    TTAC-1    TTTA-1    
 TGTA-1    TGTC-1    TCAA-1    GTCA-1    GTCC-1    CCAT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7288912|gb|AE002813.1|AE002813 Drosophila melanogaster genomic scaffold 142000013385227, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       2620 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289135|gb|AE002822.1|AE002822 Drosophila melanogaster genomic scaffold 142000013385417, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       1638 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289301|gb|AE002567.1|AE002567 Drosophila melanogaster genomic scaffold 142000013385554, complete sequence
 Position  Repeat    Coverage  Repeat 

    53704  TGTC *  5  18/20    TGTC CGTC TGTC CGTC TGTC
-----------------------------------------------------------------------------
 Total sequence length.........................       84373 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       1 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 TGTC-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7289214|gb|AE002930.1|AE002930 Drosophila melanogaster genomic scaffold 142000013385493, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       1282 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7289226|gb|AE003341.1|AE003341 Drosophila melanogaster genomic scaffold 142000013385503, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       1242 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7316107|gb|AE002566.1|AE002566 Drosophila melanogaster genomic scaffold 142000013386054, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       0 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7291169|gb|AE003451.1|AE003451 Drosophila melanogaster genomic scaffold 142000013386054 section 35 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

     4972  ATAA *  5  18/20    ATAA AAAA ATAT ATAA ATAA
    19020  CAAC *  5  18/20    CAAC CAAC CAAG TAAC CAAC
    30283  CGAA *  5  18/20    CGAA CGAA CGAA CGAA CAAC
    30303  CGAC *  5  18/20    CGAC CGAC CGAC CGAC CGTT
    33204  GACC *  5  18/20    GACC GACC GACC GACC GCAC
    53860  AACG *  5  19/20    AACG AACG AACC AACG AACG
    83348  TTAT *  5  18/20    TTAT TTGT TTAT TTAT TTAA
   101799  TATG *  9  33/36    TATG TATG TATG TTTG TATG TATG TATG CATG CATG
   108544  GTAT *  5  19/20    GTAT GTAT GTAT GTAT GTAG
   108663  CTTC *  5  19/20    CTTC CTTC CTTT CTTC CTTC
   109252  TAAA *  5  18/20    TAAA TAAA TAAA TAAA TAGT
   141971  AGTC *  5  18/20    AGTC AGTC AGTC ATTT AGTC
   157287  ACAT *  6  22/24    ACAT ACAT ATAT ACAT ACAT AAAT
   158662  ATAA *  5  18/20    ATAA ATAA AAAA ATAT ATAA
   160092  AATC *  5  18/20    AATC AATC AATC AATC TAAC
   165021  ATAG *  6  23/24    ATAG ATGG ATAG ATAG ATAG ATAG
   181807  ACCG *  8  29/32    ACCG ACCA ACCG ACCG GCCG ACCG ACCG AACG
   186689  AGAC *  8  29/32    AGAC AGAG AGAC AAAC AGAC AGAC AGAC AGAA
   187550  TATG *  6  22/24    TATG TATG TATG TACA TATG TATG
   189629  AGTT *  5  19/20    AGTT AGTT AGTT AGTC AGTT
   190621  GGTG *  5  18/20    GGTG TGTG TGTG GGTG GGTG
   203035  ACAG *  5  19/20    ACAG ACAG ACAG GCAG ACAG
   207117  CCAT *  5  20/20    CCAT CCAT CCAT CCAT CCAT
-----------------------------------------------------------------------------
 Total sequence length.........................       220623 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       23 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AATC-1    AACG-1    ATAA-2    ATAG-1    AGAC-1    AGTT-1    AGTC-1    ACAT-1    
 ACAG-1    ACCG-1    TAAA-1    TATG-2    TTAT-1    GACC-1    GTAT-1    GGTG-1    
 CAAC-1    CTTC-1    CGAA-1    CGAC-1    CCAT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7291133|gb|AE003450.1|AE003450 Drosophila melanogaster genomic scaffold 142000013386054 section 34 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

    34916  CACT *  5  18/20    CACT CACT CACT CACT CATC
    75915  AGTC *  8  29/32    AGTC AGCC AGTC AGTC AGTC AGTC AGTG AGTT
    95510  TGGA *  5  18/20    TGGA TGGG TGGA TGGG TGGA
    96499  AAAT *  5  18/20    AAAT AAAC ATAT AAAT AAAT
    97758  ATAC *  6  22/24    ATAC ATAC ATAC ATAC CTAT ATAC
    98526  AGCG *  5  18/20    AGCG AGCG AGCG AGAG AGAG
   123968  TCTA *  5  18/20    TCTA TCTA TCTA TCTA TCCG
   152854  TTAT *  8  29/32    TTAT TTAT TTAT TTAT TTAT TTAT TTGT TTTG
   157183  CATC *  5  18/20    CATC CATC CATC CGAC CATC
   164696  TTGG *  5  18/20    TTGG TTGC TTGG TTGG TTGA
   186447  TGTT *  5  19/20    TGTT TATT TGTT TGTT TGTT
   199211  ACAA *  5  18/20    ACAA ACAA ATTA ACAA ACAA
   206468  CATA *  5  18/20    CATA TATA CATA CATA TATA
   217103  TGTA *  5  18/20    TGTA TGTA TGTA TGTA TATG
   273800  TGGT *  8  29/32    TGGT TGGT TGGT TGGT TGGT TGGC TGGG TGGA
   283339  GATC *  5  19/20    GATC GATC GATC GATC GGTC
-----------------------------------------------------------------------------
 Total sequence length.........................       300732 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       16 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    ATAC-1    AGTC-1    AGCG-1    ACAA-1    TTAT-1    TTGG-1    TGTA-1    
 TGTT-1    TGGA-1    TGGT-1    TCTA-1    GATC-1    CATA-1    CATC-1    CACT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7291099|gb|AE003449.1|AE003449 Drosophila melanogaster genomic scaffold 142000013386054 section 33 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

    14636  TGGT *  5  18/20    TGGT GGGT GGGT TGGT TGGT
    18093  TTAG *  6  22/24    TTAG TTAG TTAG TTAG TCAG TCAG
    48361  GCTT *  5  18/20    GCTT GCTT GCTG GCTT CCTT
    60577  TATT *  6  22/24    TATT TGTT TATT TATT TGTT TATT
    60950  TGAC * 13  48/52    TGAC TGAA TGAC TGAC TGAC TGAC TGAC TGAC TGAC TAAC TGAA TGAC TTAC
    69163  TTTG *  5  19/20    TTTG TTTG TTTT TTTG TTTG
   115824  AGTC *  8  30/32    AGTC AGTC AGTC AGTC AGTC AGTC AGTC ATCC
   124140  TATG *  5  18/20    TATG TATG CATG TAAG TATG
   144447  TACA *  5  19/20    TACA TACA TACA TACA CACA
   159624  AACA *  5  18/20    AACA AATA AACC AACA AACA
   160340  ATAC *  5  18/20    ATAC ATAT ATAC ATAT ATAC
   162640  TTGT *  8  30/32    TTGT TTGT TTGT TTGT TTGT TTGT TTGC TTTT
   170629  ATAC *  5  18/20    ATAC ATAC ATAC ATAT ATAG
   178673  ACAG * 10  36/40    ACAG ACAG ACAG ACAG ACAG ACAG ACAG ATAG AGAT ACGG
   179624  TGTC *  5  18/20    TGTC TGTC TGCC TGTC CGTC
   183093  TTGT *  5  18/20    TTGT TTGT TTGT TTGT TCTT
   222937  ACAT *  5  18/20    ACAT ACAT ACAT ACAT ATGT
   227799  TCTG *  5  19/20    TCTG TCTG TTTG TCTG TCTG
   234424  GTTG *  5  18/20    GTTG GTTG GTTG GTTG ATTT
   259040  TGTT *  6  24/24    TGTT TGTT TGTT TGTT TGTT TGTT
   262870  TTTG *  6  23/24    TTTG TTTG TTTG TTTG TTTG CTTG
   268589  TACA *  5  19/20    TACA TACA TACA TACA TAAA
   269236  TCTA *  5  18/20    TCTA TGTA TCTA ACTA TCTA
   277740  TTCT *  6  22/24    TTCT GTCT TTCT TTCT TTCT TTTT
-----------------------------------------------------------------------------
 Total sequence length.........................       299786 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       24 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AACA-1    ATAC-2    AGTC-1    ACAT-1    ACAG-1    TATT-1    TATG-1    TACA-2    
 TTAG-1    TTTG-2    TTGT-2    TTCT-1    TGAC-1    TGTT-1    TGTC-1    TGGT-1    
 TCTA-1    TCTG-1    GTTG-1    GCTT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7291077|gb|AE003448.1|AE003448 Drosophila melanogaster genomic scaffold 142000013386054 section 32 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

     2103  CAGC *  5  18/20    CAGC TAGC CAGT CAGC CAGC
     9717  CAAC *  7  27/28    CAAC CAAC CAAC CAAC CAAC GAAC CAAC
    29822  CGCA *  6  22/24    CGCA CGCA TGCA CGAA CGCA CGCA
    45395  TTGT *  6  23/24    TTGT TTGT TTGT TTGT TTGT CTGT
    50199  ATTT *  5  18/20    ATTT ATTT ATTT TTTT TTTT
    64955  TGTA *  5  19/20    TGTA TGTA AGTA TGTA TGTA
    65434  ACGG *  5  18/20    ACGG ACAG ACGG ACGG ACAG
    74158  ATAA *  5  18/20    ATAA ATGA ATTA ATAA ATAA
    74649  ACTG *  5  20/20    ACTG ACTG ACTG ACTG ACTG
    76678  TTGG *  7  26/28    TTGG TTGT TTGC TTGG TTGG TTGG TTGG
    78719  CTTT *  5  18/20    CTTT CTTT CTTT TTTC CTTT
    81781  CTTT *  5  18/20    CTTT CTTT CTTT TTTT TTTT
    83824  GGAG *  6  22/24    GGAG AGAG GGAG GGAG GGAG CGAG
    91303  CAAA *  6  22/24    CAAA CAAA CAAA TAAA TAAA CAAA
    91363  AAAC *  6  22/24    AAAC CAAC AAGC AAAC AAAC AAAC
    94015  AATA *  5  18/20    AATA ATTA AATA AATA AATT
    96508  GACT *  6  22/24    GACT GAGT GACT GACT GACT GGCT
   102007  ATGG *  8  30/32    ATGG ATGG ATGG ATGG ATGG ATGG ATTG AGGG
   106499  CCAT *  6  22/24    CCAT CCAA CTAT CCAT CCAT CCAT
   106549  AACC *  5  18/20    AACC GACT AACC AACC AACC
   112145  AACT *  6  22/24    AACT GACT AACT AACT AACT GACT
   127070  TATC *  5  18/20    TATC TATC TATC TATA TATT
   143915  TGGT *  6  22/24    TGGT TGGT TGGC TGGT TGGC TGGT
   147680  ATCA *  5  18/20    ATCA ATCT ATCA ATCA ATAA
   180119  ACAT *  5  18/20    ACAT ACAT ACAA ACAC ACAT
   185990  GTCC *  5  18/20    GTCC GTTC GTCC GTCC GTCG
   197987  GCCA *  5  18/20    GCCA CGCA GCCA GCCA GCCA
   198008  CCAG * 15  56/60    CCAG CCAG CCAG CCAG CCAG CCAG CCAG CCAG CCAG CCAG CCAG CCAG TCAG CCAG ACGT
   234071  AAAT *  5  19/20    AAAT AAAT AAAT AAAT AAAC
   272540  TCGC *  5  19/20    TCGC TCTC TCGC TCGC TCGC
   290367  CCCA *  5  18/20    CCCA ACCA CCCA ACCA CCCA
   298761  ACTG *  5  18/20    ACTG ATTG ACTG ACTG CCTG
   298791  TGAC *  5  18/20    TGAC TGAC TGAG TGCC TGAC
   298813  ACTG *  5  19/20    ACTG ACTT ACTG ACTG ACTG
   302392  TGGA *  5  19/20    TGGA TGGA TGGA TGGA TGGT
   303774  CCAA *  5  19/20    CCAA CCAT CCAA CCAA CCAA
-----------------------------------------------------------------------------
 Total sequence length.........................       310399 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       36 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AAAC-1    AATA-1    AACT-1    AACC-1    ATAA-1    ATTT-1    ATGG-1    
 ATCA-1    ACAT-1    ACTG-3    ACGG-1    TATC-1    TTGT-1    TTGG-1    TGAC-1    
 TGTA-1    TGGA-1    TGGT-1    TCGC-1    GACT-1    GTCC-1    GGAG-1    GCCA-1    
 CAAA-1    CAAC-1    CAGC-1    CTTT-2    CGCA-1    CCAA-1    CCAT-1    CCAG-1    
 CCCA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7291054|gb|AE003447.1|AE003447 Drosophila melanogaster genomic scaffold 142000013386054 section 31 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

      441  ACTA *  5  19/20    ACTA ACTA ACTA ACTT ACTA
      773  TACA *  5  18/20    TACA TACA TACA TATA TATA
    67194  TCTA *  5  18/20    TCTA TCTC TCTC TCTA TCTA
    69416  CTCG *  5  18/20    CTCG CTCG CTCG CTCG CTTT
    71102  TCTG *  6  22/24    TCTG TTTG TCTG TCTG TCGG TCTG
    86087  GGAA *  5  18/20    GGAA GAAA GGAA GGAA GGCA
    87079  ACAG *  5  19/20    ACAG ACAG ACAG ACAG ACAT
    94442  ACAA *  6  22/24    ACAA ACAA ACAA ACAA ACAG ACCA
   102111  TATG *  5  18/20    TATG TATG TGTA TATG TATG
   112872  AGCG *  5  18/20    AGCG AGCA AGCG AGCG AGAG
   113897  CATA *  5  18/20    CATA CACA CATA CATA TATA
   130116  TATG *  5  18/20    TATG TATG TATG TACA TATG
   131008  TATG *  5  19/20    TATG CATG TATG TATG TATG
   136309  TTTA *  5  18/20    TTTA TTTA TTTA TTTT TTTT
   144048  ACTG *  6  22/24    ACTG ACGG ACTG ACTG ACTG AATG
   144078  TGAC * 15  54/60    TGAC TCAC TGGC TGAC TGAC TGAC TGAC TGAC TGAC TGAC TGAC TGGC GGAC TGAG TGAG
   157341  ATAA *  5  18/20    ATAA ATAA ATAA AAAA ATAT
   165090  CTTT *  6  23/24    CTTT CTTT CTTT CTTT CTAT CTTT
   166097  ACAT *  8  29/32    ACAT ACAT ACAT ACAT ACAT ACAT GCAT ATGT
   172132  CCAT *  6  22/24    CCAT CCAA CCAT CCAG CCAT CCAT
   192333  ATAC *  5  19/20    ATAC ATAC ATAC ATAC ATAT
   216199  ACAT *  5  18/20    ACAT ACAT ACAT AAAA ACAT
   293197  CTGA *  7  26/28    CTGA CTGA CTGA CTGA CTGA CTGG CTGT
-----------------------------------------------------------------------------
 Total sequence length.........................       304060 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       23 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATAA-1    ATAC-1    AGCG-1    ACAA-1    ACAT-2    ACAG-1    ACTA-1    ACTG-1    
 TATG-3    TACA-1    TTTA-1    TGAC-1    TCTA-1    TCTG-1    GGAA-1    CATA-1    
 CTTT-1    CTGA-1    CTCG-1    CCAT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290992|gb|AE003446.1|AE003446 Drosophila melanogaster genomic scaffold 142000013386054 section 30 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

    12178  CATA *  5  18/20    CATA CACA TATA CATA CATA
    32697  ATGG *  8  30/32    ATGG TTGG TTGG ATGG ATGG ATGG ATGG ATGG
    43022  ATGT *  6  22/24    ATGT ATGT ATGT ATGT ATGT GTAT
    43926  GTTG *  9  33/36    GTTG GTTT GTTG GTTG GTTG GTTG GTTG GTTG GAAG
    61218  ACAT *  6  22/24    ACAT ACGT ACAT CCAT ACAT ACAT
    77521  TATG *  5  18/20    TATG TATG TATG TATG TCAG
    92420  TTTG *  5  18/20    TTTG TTTG TTTG TTTT TTTT
    96611  GAAT *  6  22/24    GAAT GAAT GAAT AAAC GAAT GAAT
    97503  CCCA *  5  18/20    CCCA ACCA CCCA ACCA CCCA
    97669  TGGA *  6  22/24    TGGA TGGT TGGA TGGC TGGA TGGA
    97694  GGAT *  5  18/20    GGAT GAAT GGAT GGGT GGAT
   101663  GATT *  5  19/20    GATT GATT AATT GATT GATT
   109140  ATAC *  6  23/24    ATAC CTAC ATAC ATAC ATAC ATAC
   142644  AAAC *  6  22/24    AAAC AAAC AAAC AAAC AAAC AACT
   176049  TTAT *  5  19/20    TTAT TTAT TTAT TTAT TTAC
   181632  ACCC *  5  18/20    ACCC AACC ACCC ATCC ACCC
   190828  AAAC *  5  18/20    AAAC AAAC AAAA AAAC AAAA
   194391  TTAT *  6  22/24    TTAT TTGT TTAT TTAT TTAT TTGT
   233874  TATG *  5  18/20    TATG TATG TATG TATA TACG
   254623  AGAT *  5  18/20    AGAT TGAT AGAT AGAT ATAT
   257330  GTAT *  5  19/20    GTAT GTAT GTAT GTGT GTAT
   258862  CATA *  5  18/20    CATA AATA CATG CATA CATA
   259018  TTGG *  5  18/20    TTGG ATGG TTGG ATGG TTGG
   259038  ATGG *  5  18/20    ATGG ATGG ATTG GTGG ATGG
   259059  TGGA *  8  30/32    TGGA TGGG TGGA TGGA TGGA TGGG TGGA TGGA
   259178  ACTG *  7  26/28    ACTG ACTG ACTG CCTG ACTG ACTG AATG
   293966  GACA *  9  33/36    GACA GACA CACA GACA GACA GACA GACA GTCA GGCA
   302767  CCAG *  6  23/24    CCAG CCAG CCAG CCAG CCAA CCAG
-----------------------------------------------------------------------------
 Total sequence length.........................       303104 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       28 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAC-2    ATAC-1    ATGT-1    ATGG-2    AGAT-1    ACAT-1    ACTG-1    ACCC-1    
 TATG-2    TTAT-2    TTTG-1    TTGG-1    TGGA-2    GAAT-1    GATT-1    GACA-1    
 GTAT-1    GTTG-1    GGAT-1    CATA-2    CCAG-1    CCCA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290970|gb|AE003445.1|AE003445 Drosophila melanogaster genomic scaffold 142000013386054 section 29 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

    13181  CCAT *  5  18/20    CCAT CCAG CCAT CCAG CCAT
    13441  ATGA *  5  19/20    ATGA ATGA ATGG ATGA ATGA
    44714  TACA *  5  18/20    TACA TACA TACA TATA TATA
    45940  TTTG *  5  18/20    TTTG TTTG TTAT TTTG TTTG
    78387  TGTA *  5  18/20    TGTA TGTA TGTA TATA TATA
    98576  GAGC *  5  18/20    GAGC GAGC GAGC AAGC GAGA
    99651  TGTA *  6  22/24    TGTA TGTA TGTG TGTA TGTA TGAA
   104254  AAAT *  6  22/24    AAAT AAAT AAAT AAAA AAAT AAAA
   112331  CGTG *  5  18/20    CGTG TATG CGTG CGTG CGTG
   117318  TGGC *  8  29/32    TGGC TGAC TGGC TGGC TGAC TGGC TGGC TGGA
   131806  TCAG *  5  18/20    TCAG TCAG TCAG TCAG TTGG
   132995  AAAC *  5  20/20    AAAC AAAC AAAC AAAC AAAC
   200508  TATG *  5  18/20    TATG TTTG TATG TATT TATG
   207450  CTCG *  5  18/20    CTCG CTCG CTTG CTCG CTCT
   207482  CTCC *  6  22/24    CTCC CTCC CTCC CTCT CTCC CTCT
   216063  CCAC *  5  19/20    CCAC CCAC CCAG CCAC CCAC
   228461  TGCC *  5  18/20    TGCC TCGC TGCC TGCC TGCC
   264937  AGTC *  5  18/20    AGTC ATTC ATTC AGTC AGTC
   265164  ACAT *  5  19/20    ACAT ACAT ACAT ACAT ACAC
   274514  ACAA *  6  22/24    ACAA ACAA ACAA ACAA ACAA AGAG
   277606  TTTA *  6  22/24    TTTA TTTA TTCA TGTA TTTA TTTA
   287547  ATAC *  5  18/20    ATAC ATAC ATAC AAAC ATAT
   290297  AAAT *  5  18/20    AAAT AAAT AAAT AAAT CAAA
   291270  GGGA *  5  18/20    GGGA GGGA GGGA GGGA GGAG
   293710  TATT *  5  18/20    TATT TATT TATT TATT TGTG
   305335  CAAC *  5  18/20    CAAC TAAC CAAC CAAA CAAC
   310959  ATAC *  7  26/28    ATAC ATAC ATAT ATAT ATAC ATAC ATAC
-----------------------------------------------------------------------------
 Total sequence length.........................       313965 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       27 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-2    AAAC-1    ATAC-2    ATGA-1    AGTC-1    ACAA-1    ACAT-1    TATT-1    
 TATG-1    TACA-1    TTTA-1    TTTG-1    TGTA-2    TGGC-1    TGCC-1    TCAG-1    
 GAGC-1    GGGA-1    CAAC-1    CTCG-1    CTCC-1    CGTG-1    CCAT-1    CCAC-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290927|gb|AE003444.1|AE003444 Drosophila melanogaster genomic scaffold 142000013386054 section 28 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

     1450  ATAC *  8  30/32    ATAC ATGC ATAT ATAC ATAC ATAC ATAC ATAC
     4709  ATAC *  5  19/20    ATAC ATAC ATAC ATAC ATAT
     5973  CACG *  5  19/20    CACG CACG CACG CGCG CACG
    15127  CAAA *  8  29/32    CAAA CAAA CAAA CAAA CAAA CGAA CGAA CGAA
    29981  TACA *  6  22/24    TACA TACA TACA TGCA TATA TACA
    35777  CTAT * 13  47/52    CTAT TTAT CTAT CTAT CTAA CTAT CTAT ATAT CTAT CTAT CTAT CTAT ATAA
    38975  TCAC *  8  31/32    TCAC TCAC TCAT TCAC TCAC TCAC TCAC TCAC
    78986  TGAT *  5  18/20    TGAT TGTT TGAT TGTT TGAT
    95505  TATG *  5  19/20    TATG TATG TATG TATG TATA
    99859  TACA *  5  18/20    TACA TACA TACA TACA TATG
   103405  AATA *  5  19/20    AATA AATA AATA AAGA AATA
   104538  TACA *  5  18/20    TACA TACA TACA TACA TAAT
   107105  TATG *  6  22/24    TATG TATG CATG TATG TATG TGTG
   107977  TCAT *  5  20/20    TCAT TCAT TCAT TCAT TCAT
   126516  TATG *  6  22/24    TATG TATG TATG TCTG TATA TATG
   164335  TATG *  5  18/20    TATG TATA TATG TATA TATG
   167318  CAGA *  8  29/32    CAGA CAGA TAGA CAGA CAGA CAGA CAGG CAGG
   202450  ACCA *  5  18/20    ACCA ACCA ACCA AGCA AGCA
   208115  GTTA *  6  23/24    GTTA GTTA GTTA GTTA GTTC GTTA
   209587  ATTT *  5  19/20    ATTT CTTT ATTT ATTT ATTT
   214637  TTAT *  5  18/20    TTAT TTAT TTAT ATAT ATAT
   222670  CTTT *  5  20/20    CTTT CTTT CTTT CTTT CTTT
   230295  CTGT *  6  22/24    CTGT CTGC CTGT CTGT CTGT CTCT
   257688  ACAT *  7  26/28    ACAT ACAA ACAT ACAT ACAT ACGT ACAT
   260251  ACAA *  6  22/24    ACAA ACAA ACAA ACAA ACAA GCCA
   290017  ATTT *  5  18/20    ATTT ATTA ATTT ATTT AGTT
   293004  ATAC *  6  22/24    ATAC ATAC ATAC ATGC ATAC ATAT
-----------------------------------------------------------------------------
 Total sequence length.........................       300710 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       27 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AATA-1    ATAC-3    ATTT-2    ACAA-1    ACAT-1    ACCA-1    TATG-4    TACA-3    
 TTAT-1    TGAT-1    TCAT-1    TCAC-1    GTTA-1    CAAA-1    CAGA-1    CACG-1    
 CTAT-1    CTTT-1    CTGT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290880|gb|AE003443.1|AE003443 Drosophila melanogaster genomic scaffold 142000013386054 section 27 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

    16778  AAAT *  5  19/20    AAAT AAAT AAAT AAAT AGAT
    18375  AATT *  5  18/20    AATT AATT AATT AATT CAGT
    29973  AAAT *  5  18/20    AAAT AAAT AAGT AATT AAAT
    47462  ATCC *  6  22/24    ATCC AGCA ATCC ATCC ATCC ATCC
    55032  CATA *  5  18/20    CATA CATA CATA CATA TATG
    58708  TTTG *  5  18/20    TTTG TTTG TTTT TTTT TTTG
    64921  GTCC *  5  19/20    GTCC GTCC GTCT GTCC GTCC
    82448  TGTA *  6  22/24    TGTA TTTA TGTT TGTA TGTA TGTA
    85228  ACAT *  6  22/24    ACAT ACAT ACAT ACAT ATAT GCAT
   102427  TATG *  5  18/20    TATG TATG TACA TATG TATG
   113834  TATG *  6  22/24    TATG TATG TACA TATG TATG TATG
   114042  CCAA * 13  47/52    CCAA CCAA CCAA CCAA CCAA CCAA CCAA CCAA CCAA CCAG CTAC CCAA ACCA
   119088  ATAA *  5  18/20    ATAA ATAA ACAA ATAA ACAA
   149340  AGCC *  8  29/32    AGCC AGCC AGCC AGCC AGCC AGTT AGCC AGGC
   150730  AAAT *  7  26/28    AAAT AAAT AAAT AAAT AAAT AAAA AAAC
   192762  CTGT *  5  18/20    CTGT CTAT CTGT ATGT CTGT
   192787  TGTC *  5  18/20    TGTC TGTC TGTC TGTT TGAC
   216238  ATGT *  5  19/20    ATGT ATGT ATGT ATGT ATGA
   224458  ATAC *  5  18/20    ATAC ATAC ATAC ATAT ATGC
   232380  TATG *  5  18/20    TATG TATG TATG TACG TATA
   237414  TACA *  5  18/20    TACA TACA TACA TATA CACA
   245993  TAAA *  5  18/20    TAAA TGAA TAAA TAAA TAAC
   249065  CGTT *  8  29/32    CGTT CGTT TGTT CGTT CGTT CGTT CGCT TGTT
   249968  TTCA * 13  50/52    TTCA TTCA TTCA TTCA TTCA CTCA TTCA TTCA TTCA TTCA TTCA TTCA TTCT
   255000  CATA *  6  23/24    CATA CACA CATA CATA CATA CATA
   259016  ATAC *  9  35/36    ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAA
   264412  AATA *  8  29/32    AATA AATA AATA AATA AATA AATA AATC AAAG
   268410  TGGC *  5  18/20    TGGC TGGC TGGC TGGT TGGT
   283920  TATG *  5  18/20    TATG TATG TATG TACA TATG
   300733  TATG *  5  19/20    TATG TATG TATG TATG TGTG
   301744  TGTA *  5  18/20    TGTA TGTA CATA TGTA TGTA
   301997  TACA *  5  18/20    TACA TATG TACA TACA TACA
-----------------------------------------------------------------------------
 Total sequence length.........................       302357 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       32 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-3    AATA-1    AATT-1    ATAA-1    ATAC-2    ATGT-1    ATCC-1    AGCC-1    
 ACAT-1    TAAA-1    TATG-5    TACA-2    TTTG-1    TTCA-1    TGTA-2    TGTC-1    
 TGGC-1    GTCC-1    CATA-2    CTGT-1    CGTT-1    CCAA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290831|gb|AE003442.1|AE003442 Drosophila melanogaster genomic scaffold 142000013386054 section 26 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

     5300  ATTT *  9  33/36    ATTT AAAT ATTT ATTT ATTT ATTT ATTT ATTT ATTG
    27819  ACAA *  5  18/20    ACAA GCAA GCAA ACAA ACAA
    29349  ACAA *  7  26/28    ACAA GCAA ACAA ACAA ATAA ACAA ACAA
    37887  AATT *  5  18/20    AATT AACT AATT AATT GATT
    38260  CCAA *  6  22/24    CCAA CCAA CCAA CCAA CTAA CTAA
    47254  ATAC *  7  26/28    ATAC ATAC ATAC ATAC ATAC ATAG ATAT
    48089  TATG *  5  18/20    TATG TACA TATG TATG TATG
    57040  TATG * 10  36/40    TATG TATG TATG TATG TATG TATG TATG TATG AAAC TATA
    57361  GTGG *  5  18/20    GTGG TTGG GTGG TTGG GTGG
   104822  CAAA *  5  18/20    CAAA CAAA CAAA CAAA AAAC
   131104  GGTC *  6  22/24    GGTC GGTC GGTC GGTC GGTT GGTT
   141475  ACAG *  5  18/20    ACAG ACAG ACAG ATAG ACAC
   160036  ATTA *  5  18/20    ATTA ATTA ATTG GTTA ATTA
   160331  TATG *  8  29/32    TATG TATG TATG TATG TATG TATG TTTG TTTT
   180830  ATTT *  5  18/20    ATTT ATTT ATAT ATTT ATAT
   182458  TTTA *  5  18/20    TTTA TTTA TTAA CTTA TTTA
   182895  CATC *  8  30/32    CATC CATC CATC CATC CATC CACC CATC CACC
   195472  CTGA *  9  33/36    CTGA CAGA CTGA CTGA CTGA CTGG CTGA CTAA CTGA
   208065  CTTT *  5  18/20    CTTT CTTT TTTT CTTT TTTT
   224076  ACAG * 10  37/40    ACAG ACAG ACAG CCAG ACAG ACAG ACAG GCAG ACAG GCAG
   224851  TTTA *  5  18/20    TTTA TTTA TTTA TTTT TTTT
   233292  CTAT *  5  18/20    CTAT CTTT CTAT CTTT CTAT
   235508  TTTG *  5  18/20    TTTG TTGG TTGG TTTG TTTG
   243031  TTGG * 15  54/60    TTGG TTGG TTGG TTTG TTGG TTGG TTGG TTGG TTGG TTGA TTGA TTGG TTGA TTGA TTGA
   263815  ACCA *  8  29/32    ACCA ACCA ACCA ACCA ACCA ACCA ATCA ATCT
   278322  CTGA *  5  18/20    CTGA CTAA CTGA CTAA CTGA
   278345  ACTG *  7  26/28    ACTG ACTG ATTG ACTG ACTG GCTG ACTG
   279595  TATG *  5  19/20    TATG TATG TATG TTTG TATG
   283575  TTTG *  6  22/24    TTTG TTTG TTTG TTTG TTTG TGTT
   285719  GTTG *  5  18/20    GTTG GTTG GTTG GGTG GCTG
   294763  CGCT *  5  19/20    CGCT CGCT CACT CGCT CGCT
   301615  GTAT *  5  18/20    GTAT GTAT GTAT TTAC GTAT
-----------------------------------------------------------------------------
 Total sequence length.........................       306267 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       32 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AATT-1    ATAC-1    ATTA-1    ATTT-2    ACAA-2    ACAG-2    ACTG-1    ACCA-1    
 TATG-4    TTTA-2    TTTG-2    TTGG-1    GTAT-1    GTTG-1    GTGG-1    GGTC-1    
 CAAA-1    CATC-1    CTAT-1    CTTT-1    CTGA-2    CGCT-1    CCAA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290819|gb|AE003441.1|AE003441 Drosophila melanogaster genomic scaffold 142000013386054 section 25 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

    13409  TCAG *  5  19/20    TCAG TCAG TCAT TCAG TCAG
    14309  CTGA *  5  18/20    CTGA CAAA CTGA CTGA CTGA
    27698  CCGT *  8  29/32    CCGT CCGT CCGT CCGT CCGT CCGT CCAC CCAT
    51093  GTCC *  5  18/20    GTCC GCCC GTCC GTCC GTTC
    59858  CAAA *  6  22/24    CAAA CAAA CAAA CAAA CAAC AAAA
    67261  CAAC *  5  19/20    CAAC CAAC CAAC CAAC CAGC
    75426  CTTT *  6  22/24    CTTT CTTT CATT CTTT CTTT TTTT
   141712  TGAC *  5  19/20    TGAC TGAC TGAC TGAA TGAC
   142015  AATG *  5  18/20    AATG AATG AATA AGTG AATG
   147250  CTTC *  5  18/20    CTTC CTTC CTTC CATC CTGC
   149636  TACA *  5  18/20    TACA TGCA TACA TAGA TACA
   156166  ATTC *  5  18/20    ATTC ATTC ATTT ATTC ATTT
   160645  ACAT *  5  18/20    ACAT ACAT ACAT ATAT ATAT
   161103  TAAA *  5  18/20    TAAA TAAA TAAT TAAA TGAA
   205919  ACAG *  5  18/20    ACAG ACGG AGAG ACAG ACAG
   218053  AATA *  5  18/20    AATA AATA AATA AATA ACAA
   241176  ATAG *  6  22/24    ATAG ATAG ATGG ATAG ATTG ATAG
   246599  TGTC *  5  18/20    TGTC TGTC TGTC TGAC TGTG
   262060  TGAA *  5  18/20    TGAA TGAA TGAA TGAG GGAA
   264350  TTAT *  5  18/20    TTAT TTAT TTAT TTCT TTTT
-----------------------------------------------------------------------------
 Total sequence length.........................       285272 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       20 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AATA-1    AATG-1    ATAG-1    ATTC-1    ACAT-1    ACAG-1    TAAA-1    TACA-1    
 TTAT-1    TGAA-1    TGAC-1    TGTC-1    TCAG-1    GTCC-1    CAAA-1    CAAC-1    
 CTTT-1    CTTC-1    CTGA-1    CCGT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290801|gb|AE003440.1|AE003440 Drosophila melanogaster genomic scaffold 142000013386054 section 24 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

     1282  ACTG *  6  24/24    ACTG ACTG ACTG ACTG ACTG ACTG
    12452  AGTC *  5  18/20    AGTC AGTC AGTC TGGC AGTC
    16054  GCCA *  5  19/20    GCCA GCCA GTCA GCCA GCCA
    31545  GATG *  6  23/24    GATG GATG GATG GATG GCTG GATG
    36687  CACC *  5  18/20    CACC CAAC CACC CACC GACC
    37657  ATGG *  5  18/20    ATGG CTGG ATGG CTGG ATGG
    37677  CTGG *  6  22/24    CTGG CTGC CTGG CTGG CTGG CTGC
    37701  ATGA *  5  19/20    ATGA ATGA ATGA ATGA ATGG
    39331  GATG *  5  18/20    GATG GATG GCTG GGTG GATG
    45623  TGGC *  5  18/20    TGGC TGGC TGGT TGGC TGGG
    56914  CCGT *  5  18/20    CCGT CCGT TTGT CCGT CCGT
    65383  AAAT *  5  19/20    AAAT CAAT AAAT AAAT AAAT
    69539  AACA *  5  18/20    AACA AACA AACA AACA AAAC
    80283  TATG *  6  22/24    TATG TATG TATG TATG TATG TAAA
    84300  TGTT *  5  18/20    TGTT CGTT CGTT TGTT TGTT
    86038  AATA *  5  18/20    AATA AATC ACTA AATA AATA
   100152  TGCG *  6  22/24    TGCG TGCG TGCG TGCG TGTG TGTG
   107749  ATAC *  5  18/20    ATAC ATAC ATAC ATAT TTAC
   124799  GATA *  5  19/20    GATA GATA GGTA GATA GATA
   126957  CATA *  5  18/20    CATA CATA CATA TGTA CATA
   128290  TCGC *  6  22/24    TCGC TCGC TCGC CCGC TCGC TCTC
   129894  ACAT *  5  18/20    ACAT ACAT ACAT ACAT ATTT
   132572  TACA *  6  22/24    TACA TATA TACA TACA TACA TATA
   135887  GTCA *  5  18/20    GTCA GTTA GTCA GTCA GTCG
   140440  GTCA *  7  27/28    GTCA GTCA GTCA GTCA GTCA GTCA CTCA
   144522  TATG *  5  18/20    TATG TATG TATG TATG TACA
   145626  TATG *  5  18/20    TATG TAAG TATG TATG CATG
   163979  GTAT *  5  18/20    GTAT GTAT GTAT GTAT ATGT
   190497  ACGG *  5  18/20    ACGG GCGG GCGG ACGG ACGG
   192494  GTTC *  6  22/24    GTTC GTTC GTTC GTTC GTTC GTCT
   193416  ACAT *  5  18/20    ACAT ACAT ATAT ACAC ACAT
   196648  ACCG *  5  18/20    ACCG ACCC ACCG ACTG ACCG
   199840  CATA *  5  19/20    CATA CATA CATA CATA TATA
   212545  TATG *  5  18/20    TATG TATG TATG TATG TGGG
   214568  ATAC *  5  18/20    ATAC ATAC ATAC ATTC ATCC
   223588  CCAT *  6  23/24    CCAT CCAT CCAT CCAT CTAT CCAT
   232547  TGAA *  5  18/20    TGAA CGAG TGAA TGAA TGAA
   246623  TGGG *  5  18/20    TGGG TGGG TGGG TGTT TGGG
   258872  CCAA *  6  22/24    CCAA CCAA CCAA CCAA GCAA CCAT
   258896  CCAT *  7  28/28    CCAT CCAT CCAT CCAT CCAT CCAT CCAT
   259316  TAAA *  5  18/20    TAAA AAAA TAAA TAAA AAAA
   275540  ACCA *  7  26/28    ACCA ACCA ACCA ACCA ACCA ACCA GGCA
   276311  TAAT *  5  18/20    TAAT TAAT TAAT TAAT AATT
   276919  CTGA *  6  24/24    CTGA CTGA CTGA CTGA CTGA CTGA
   277791  ACCA *  7  26/28    ACCA ACCA ACCA ACCA ACCA TCTA ACCA
   282466  TAAA *  5  19/20    TAAA TAAA TAAG TAAA TAAA
   283822  ATTT *  5  18/20    ATTT ATTT ATGC ATTT ATTT
   290642  CATC * 11  40/44    CATC CATC CATC TATC CACC CATC CATC CATC CACC TATC CATC
   299288  CCAT *  5  18/20    CCAT TCAT CCAT ACAT CCAT
-----------------------------------------------------------------------------
 Total sequence length.........................       342068 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       49 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AATA-1    AACA-1    ATAC-2    ATTT-1    ATGA-1    ATGG-1    AGTC-1    
 ACAT-2    ACTG-1    ACGG-1    ACCA-2    ACCG-1    TAAA-2    TAAT-1    TATG-4    
 TACA-1    TGAA-1    TGTT-1    TGGG-1    TGGC-1    TGCG-1    TCGC-1    GATA-1    
 GATG-2    GTAT-1    GTTC-1    GTCA-2    GCCA-1    CATA-2    CATC-1    CACC-1    
 CTGA-1    CTGG-1    CCAA-1    CCAT-3    CCGT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290764|gb|AE003439.1|AE003439 Drosophila melanogaster genomic scaffold 142000013386054 section 23 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

      302  GTTG *  5  18/20    GTTG GTTG GTTG GTTG CTTC
    15201  TATG *  5  18/20    TATG TACA TATG TATG TATG
    17987  ATAC *  5  19/20    ATAC ATAC ATAT ATAC ATAC
    18048  TATG *  5  18/20    TATG TATG TGTG TGTG TATG
    19969  TGTA *  5  18/20    TGTA TGTA GCTA TGTA TGTA
    20000  ATAC *  5  19/20    ATAC ATAC ATAC ATAC ATAT
    21587  ACAT *  6  22/24    ACAT ACAT ACAT ACAT ACAT ATCT
    21784  ATAC *  6  22/24    ATAC ATAC ATAC ATAT GTAC ATAC
    21984  TATG *  6  22/24    TATG TATG TACA TATG TATG TATG
    22027  ATAC *  5  18/20    ATAC ATAC ATAT GTAC ATAC
    24301  ATAC *  5  18/20    ATAC ATAC ATAC ATAG CTAC
    24432  TACA *  7  26/28    TACA TACA TACA TACA TATG TACA TACA
    26461  ATAC *  5  18/20    ATAC ATAC ATAC ATAT GTAC
    52400  GCCA * 13  48/52    GCCA GCCA GCCA GCCA GCCA GGCA GCCA GCCA GCCA GCCA GGCA GCCA GTCG
    52825  TACA *  5  18/20    TACA GACA TGCA TACA TACA
    52870  ATAC *  5  18/20    ATAC ATAC ATAC ACAC ACAC
    89689  ACAG *  5  18/20    ACAG ACAC ACAG ACAC ACAG
   103239  CTCA *  5  19/20    CTCA CTCA CTCA CTCA CACA
   103279  GAGC *  5  18/20    GAGC GAGC GAGA GAGG GAGC
   140582  GTCA *  6  22/24    GTCA GTCA TTCA GTCA GTTA GTCA
   145654  ACGG *  5  18/20    ACGG ACAG ACAG ACGG ACGG
   146301  TTTA *  6  22/24    TTTA TTTA TTTT TTTA TTTA TTTT
   173855  ATGT *  6  22/24    ATGT ATGT ATGT ATGT AAGT AAGT
   181885  AATA *  5  18/20    AATA AATA AATA AATA ATAA
   200063  CAAT *  8  30/32    CAAT CAGT CAAT CATT CAAT CAAT CAAT CAAT
   202073  GCCA *  6  22/24    GCCA GCCA ACCA GCCA GCCA GCTA
   209582  ACCC *  5  18/20    ACCC ACCC ACCT AGCC ACCC
   211988  ATAC *  5  18/20    ATAC ATAC ATAC ATAT TTAC
   268106  TACA *  7  26/28    TACA TACA TACA TACA TACA TACA TATG
   275171  TACA *  5  19/20    TACA TACA TACA TACA AACA
   275695  ATAC *  5  18/20    ATAC ACAC ACAC ATAC ATAC
   275754  CATA *  6  22/24    CATA CATA CATA CATA TATA CGTA
   279964  TGGT *  6  22/24    TGGT TGGA TGGT TGGT TGGT TGGA
   309283  TTGG *  5  18/20    TTGG ATGG TTGG GTGG TTGG
-----------------------------------------------------------------------------
 Total sequence length.........................       328089 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       34 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AATA-1    ATAC-9    ATGT-1    ACAT-1    ACAG-1    ACGG-1    ACCC-1    TATG-3    
 TACA-4    TTTA-1    TTGG-1    TGTA-1    TGGT-1    GAGC-1    GTTG-1    GTCA-1    
 GCCA-2    CAAT-1    CATA-1    CTCA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290724|gb|AE003438.1|AE003438 Drosophila melanogaster genomic scaffold 142000013386054 section 22 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

      631  TCGC *  5  18/20    TCGC TCTC TCGC TCGC TCTC
    10450  CAAA *  6  22/24    CAAA CAAA CAAA CAAA CAAA TAGA
    32609  AAAT *  5  18/20    AAAT AAAT AAAT AAAT ACAC
    37837  TCTA *  5  18/20    TCTA TCTT TCTA TCTA TCTC
    44546  TTGA *  5  18/20    TTGA TTGA TTGA CTGG TTGA
    45947  CATA *  5  18/20    CATA TATA CATA CATA TATA
    47546  CATA *  5  18/20    CATA CACA CAGA CATA CATA
    50742  TCGG *  5  18/20    TCGG TCAG TCGG TCGG TCCG
    62919  CAAA *  5  19/20    CAAA CGAA CAAA CAAA CAAA
    71384  ATCC *  6  23/24    ATCC ATCT ATCC ATCC ATCC ATCC
    76110  TATG *  5  18/20    TATG TATC TATG TATC TATG
    79297  TACA *  5  18/20    TACA TACA TACA TATA TATA
    80467  AACC *  5  18/20    AACC AACG AACC AACG AACC
    85359  TTTG *  5  19/20    TTTG TTTG TTTG TTTT TTTG
    90983  TCCA *  6  22/24    TCCA TCTA TCCA TCTA TCCA TCCA
   115780  AACC *  5  18/20    AACC AAAC AACC AACC ACCC
   122205  CATA *  5  19/20    CATA CATA CATA CATA CATT
   126260  ATAC *  5  18/20    ATAC ATAC ATAC GTAC ATAT
   142090  CAAC *  5  20/20    CAAC CAAC CAAC CAAC CAAC
   180143  TATG *  6  22/24    TATG TACA TATG TATG TATG TATG
   184023  TTGC *  5  19/20    TTGC TTGC TTGG TTGC TTGC
   184424  GATC *  5  18/20    GATC GATC GTTC TATC GATC
   189001  ATAC *  5  19/20    ATAC ATAC ATAC ATAC ATAT
   193410  GTCC * 14  51/56    GTCC GTCC GTCC GTCC GTCC GTCC GTCC GTCC GTCC GTCC GTCC GTCC GTGT CAAC
   193612  AACC *  5  18/20    AACC AAGC AACC AACC ATCC
   193632  ATCC *  6  24/24    ATCC ATCC ATCC ATCC ATCC ATCC
   197018  AAAT *  6  22/24    AAAT AAAC AAAC AAAT AAAT AAAT
   198711  TCCG *  5  18/20    TCCG CCCG TCCG TCCG TCCT
   200174  CCAT *  6  22/24    CCAT AGAT CCAT CCAT CCAT CCAT
   207918  ATCG *  5  19/20    ATCG ATCG ATCG ACCG ATCG
   208698  ATCG *  5  18/20    ATCG ATCG ATCG ATTG ATAG
   211101  TGTC *  5  18/20    TGTC CGTC TGTC CGTC TGTC
   235492  CCAG *  6  22/24    CCAG CCAG CCAG CCAG CCAG CCTT
   241771  AGTT *  5  18/20    AGTT AGTT AGTT AGTT TGGT
   250980  CATC *  5  20/20    CATC CATC CATC CATC CATC
   252001  AAAT *  5  18/20    AAAT AAAT AAGA AAAT AAAT
   257285  CCAG *  8  29/32    CCAG CCAG CCAG CCAG CCAA CCAA CCAG CAAG
   273425  GATT *  5  19/20    GATT GATT GATT GATT GATG
   278537  GTCC *  5  19/20    GTCC GTCT GTCC GTCC GTCC
-----------------------------------------------------------------------------
 Total sequence length.........................       299372 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       39 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-3    AACC-3    ATAC-2    ATCG-2    ATCC-2    AGTT-1    TATG-2    TACA-1    
 TTTG-1    TTGA-1    TTGC-1    TGTC-1    TCTA-1    TCGG-1    TCGC-1    TCCA-1    
 TCCG-1    GATT-1    GATC-1    GTCC-2    CAAA-2    CAAC-1    CATA-3    CATC-1    
 CCAT-1    CCAG-2    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290686|gb|AE003437.1|AE003437 Drosophila melanogaster genomic scaffold 142000013386054 section 21 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

     1031  TGTA *  6  23/24    TGTA TGTA TGTA TGTA AGTA TGTA
     6027  CTAT *  6  22/24    CTAT CTAT CTAT CTAT CTGT CTCT
    31068  GTAT *  6  23/24    GTAT GTAT GTAT GTAT GTAT GCAT
    33918  ATAC *  6  22/24    ATAC ATAC ATAC ATAC ATAC GTAT
    94613  AAAT *  5  18/20    AAAT AAAT TAAT AAAT ATAT
   109092  GAGC *  5  18/20    GAGC AAGC GAGC GAGC GAGA
   122286  TTAT *  5  18/20    TTAT TTAT TTAT TTTT TTGT
   141542  CCCT *  6  23/24    CCCT CCCT ACCT CCCT CCCT CCCT
   148104  CTGA *  5  19/20    CTGA CTGA CTGA CTGA CTGG
   171581  GTGC *  5  18/20    GTGC GTGT GTGC GTGT GTGC
   194823  AAAT *  5  18/20    AAAT AAAT AAAT AAAT ACAA
   204286  CGAC *  6  22/24    CGAC CGAC CGAC CGAC CGAC CACC
   204442  CAAA *  5  18/20    CAAA CAAA CAAA CAAA CACC
   207031  ATGT *  5  19/20    ATGT ATGT ATGT ATGT GTGT
   209812  TACA *  5  18/20    TACA TATA TACA TACA TACG
   210222  TTTC *  5  18/20    TTTC ATTG TTTC TTTC TTTC
   224815  ATAC *  5  18/20    ATAC ATAC ATAC ATAT ATAT
   225998  CTCA *  5  18/20    CTCA CTCT CTCA CTCT CTCA
   230147  TCTG *  5  18/20    TCTG TCTG TCTG TCAG TGTG
   230305  GTTA *  5  18/20    GTTA GTTA GTTA GTTA TTAA
   238652  TATG *  5  19/20    TATG CATG TATG TATG TATG
   242517  CATT *  6  22/24    CATT CATT CGTT CATT CATT CGTT
   242542  ATTC *  5  18/20    ATTC ATTC ATTC GCTC ATTC
   245989  ACAT * 10  38/40    ACAT GCAT ACAT ACAT ACAT ACAT ACAT ACAT ACAT ACAA
   250486  CAAT *  6  22/24    CAAT CTGT CAAT CAAT CAAT CAAT
   271335  GCTG *  6  22/24    GCTG GTTG GCTG ACTG GCTG GCTG
   271971  GTTG *  5  18/20    GTTG GGTG GTTG GGTG GTTG
   274388  CGAG *  8  29/32    CGAG CGAG CGAG CGAG CGAG AGAG AGAG AGAG
   279187  CTAC *  6  22/24    CTAC CCAC CTAC CCAC CTAC CTAC
   280387  TTAT *  5  18/20    TTAT TTAT TTAT TTCG TTAT
   282770  CAGA *  6  22/24    CAGA CAGA CAGA CAAA AAGA CAGA
   302740  ACCA *  8  29/32    ACCA ACCA ACCA ATCA ACCA ACCA CCCA CCCA
   303011  TTAG *  6  23/24    TTAG CTAG TTAG TTAG TTAG TTAG
-----------------------------------------------------------------------------
 Total sequence length.........................       305046 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       33 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-2    ATAC-2    ATTC-1    ATGT-1    ACAT-1    ACCA-1    TATG-1    TACA-1    
 TTAT-2    TTAG-1    TTTC-1    TGTA-1    TCTG-1    GAGC-1    GTAT-1    GTTA-1    
 GTTG-1    GTGC-1    GCTG-1    CAAA-1    CAAT-1    CATT-1    CAGA-1    CTAT-1    
 CTAC-1    CTGA-1    CTCA-1    CGAG-1    CGAC-1    CCCT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290653|gb|AE003436.1|AE003436 Drosophila melanogaster genomic scaffold 142000013386054 section 20 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

    25556  AATA *  5  19/20    AATA AATA TATA AATA AATA
    62020  CGAT *  5  19/20    CGAT CGAT CAAT CGAT CGAT
    70013  AAAG *  5  18/20    AAAG AAAG AAAG AAAA AAAA
    95823  ACAT *  6  22/24    ACAT AAAT ACAT ACAT ACAT AGAT
    98178  AAAC *  7  26/28    AAAC ACAC AAAC AAAC AAAC AAAT AAAC
   104702  TCCT *  7  26/28    TCCT TCCT TCCG TCCT TCCT TCCT TCCG
   114525  ATAC *  6  22/24    ATAC ATAT GTAC ATAC ATAC ATAC
   142797  ACAA *  5  18/20    ACAA ACAA AAAA ACAA AAAA
   170500  CCGT *  5  20/20    CCGT CCGT CCGT CCGT CCGT
   188638  GTAA *  5  18/20    GTAA ATAA GTAA GGAA GTAA
   189772  AACA *  6  23/24    AACA AACA AACA AACA AACA AACC
   217696  AATA *  5  18/20    AATA AAAA AATA AAAA AATA
   222021  TTTG *  6  22/24    TTTG TTTT TTTG TTTG TTTG TTTT
   235811  AATA *  5  18/20    AATA AGCA AATA AATA AATA
   240689  CGAT *  5  18/20    CGAT CGAT GGAT CGAT TGAT
   281657  CCAC *  5  18/20    CCAC CCAC CCAC ACAC ACAC
-----------------------------------------------------------------------------
 Total sequence length.........................       307017 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       16 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAG-1    AAAC-1    AATA-3    AACA-1    ATAC-1    ACAA-1    ACAT-1    TTTG-1    
 TCCT-1    GTAA-1    CGAT-2    CCAC-1    CCGT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290600|gb|AE003435.1|AE003435 Drosophila melanogaster genomic scaffold 142000013386054 section 19 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

    11492  CCAC *  5  18/20    CCAC CCAA ACAC CCAC CCAC
    22226  TACA *  6  22/24    TACA TACA TACA CACA TACA TACT
    22630  ATAC *  6  22/24    ATAC ATAC ATAC ATAC ATAT ATAA
    24529  TTTG *  9  33/36    TTTG TTTT TTTT TTTG TTTG TTTG TTTG TTTG TTTT
    51848  AAGA *  5  18/20    AAGA AAGA AAGA GCGA AAGA
    55695  TCCA *  5  18/20    TCCA TCCA TCCA TCCA TCTG
    64564  TAAA *  5  18/20    TAAA TAAG TAAA TAAA TAAT
    72147  AGAT *  5  18/20    AGAT AGTT AGTT AGAT AGAT
    72960  CCAA *  5  18/20    CCAA CCAA CCAA CCAG CCAG
    74615  ACGG *  5  18/20    ACGG ATGG ACGG ATGG ACGG
    84308  AATG * 10  36/40    AATG AATG AATA AATG AATG AACG AATG AATG ACTG AATA
    98601  GCCA *  7  26/28    GCCA GCCA GCCA GCCA GCCA GTCC GCCA
   119814  GACC *  5  19/20    GACC GACC GACC GAAC GACC
   137602  CAAA *  5  19/20    CAAA CAAA CAAA CAAA CACA
   141486  ATCG *  7  26/28    ATCG ATCG ATCG AACG ATCG ATTG ATCG
   144552  ACAT *  5  18/20    ACAT ACAT ATAT ACAT ATAT
   150048  AATA *  5  20/20    AATA AATA AATA AATA AATA
   184492  CCAT *  5  18/20    CCAT CCAT CAAT CCAG CCAT
   193545  GTTT *  7  26/28    GTTT ATTT GTTT GTTT GTTT GTTT GTTC
   220175  TGGC *  6  22/24    TGGC TGGC TGGC TGGC TGGC TGAA
   231277  ATGA *  5  18/20    ATGA ATAA ATGA ATGA ATGT
   258050  CATA *  5  18/20    CATA CATA TGTA CATA CATA
   261899  ATAC *  5  19/20    ATAC ATAC ATAC ATAC ATAT
   264011  TATG * 10  37/40    TATG TATG TATG CATG GATG TATG TATG TATG TATG TATA
   264117  TATG *  5  18/20    TATG CATG TATG TATG TATC
   269017  TATG *  6  24/24    TATG TATG TATG TATG TATG TATG
   277782  CATA *  5  18/20    CATA CAAG CATA CATA CATA
   278054  CGCA *  5  18/20    CGCA CGCA CGCA CGCA TGCG
   278668  ATAC *  5  18/20    ATAC ATAC ATAA ATAC ATAT
   284078  AGTC *  6  23/24    AGTC AGTC AGTC AGTT AGTC AGTC
   292443  TAAT *  5  18/20    TAAT TAAT TAAT TTAT AAAT
   299749  TATG *  5  18/20    TATG TATG TATG TATA TATA
-----------------------------------------------------------------------------
 Total sequence length.........................       300557 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       32 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AATA-1    AATG-1    AAGA-1    ATAC-3    ATGA-1    ATCG-1    AGAT-1    AGTC-1    
 ACAT-1    ACGG-1    TAAA-1    TAAT-1    TATG-4    TACA-1    TTTG-1    TGGC-1    
 TCCA-1    GACC-1    GTTT-1    GCCA-1    CAAA-1    CATA-2    CGCA-1    CCAA-1    
 CCAT-1    CCAC-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290572|gb|AE003434.1|AE003434 Drosophila melanogaster genomic scaffold 142000013386054 section 18 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

    17042  TGTC *  5  18/20    TGTC TGTC TGTC TGTG TGTT
    18911  ATAG *  5  18/20    ATAG ATAC ATAG ATAG AAAG
    30817  ACAT * 10  36/40    ACAT ACAG ACAT ACAG ACAT ACAT ACAT ACAT ATAT ATAT
    52061  ATGT *  5  18/20    ATGT ATGT ATGT ATGT ACAT
    55727  GTTT *  5  18/20    GTTT GTTT GTAT GTTT GTTA
    55753  TTGT *  8  30/32    TTGT TTGT TTGT TTGT TTGT TTGT TCGT TTGC
    57359  TCAA *  6  22/24    TCAA TCAA CCAG TCAA TCAA TCAA
    63112  TGTA *  5  18/20    TGTA TGTG TGTC TGTA TGTA
    64182  ATCT *  6  23/24    ATCT ATCT ACCT ATCT ATCT ATCT
    72070  AAAT *  5  18/20    AAAT AAAT AAAT AAAT TAAG
    73055  AACA *  5  18/20    AACA AACA ATCA ACCA AACA
    73075  ACCA *  7  27/28    ACCA ACCA ACCA ACCA ACCA ACCA ACAA
    92396  ATGG *  5  19/20    ATGG ATGA ATGG ATGG ATGG
    95550  TGTA *  5  18/20    TGTA TGTA TGTA CATA TGTA
   109796  GTTG *  5  18/20    GTTG GTTG GTTG GTGG GTGG
   128024  TTTA *  5  18/20    TTTA TTTA ATCA TTTA TTTA
   133899  TATG *  7  26/28    TATG TATG TATG TATG TATG TATA TATA
   141561  ACAT *  5  18/20    ACAT ACAT ACAT ATAT ATAT
   145111  ATGG *  6  22/24    ATGG CTGG ATGG ATGG ATGG TTGG
   146698  TACA *  5  19/20    TACA TACA TACA TACA TATA
   161307  AATA *  5  18/20    AATA AATA AATA AAAA AAAA
   163856  GACT * 13  49/52    GACT GACT GACT GACT GACT GACT AACT GACT GACT GACT GACT GGCT GATT
   190920  TTGA *  5  18/20    TTGA TTGA TTGA CGGA TTGA
   208103  TATG *  5  18/20    TATG TATA TATG TATA TATG
   221608  ACAT *  6  22/24    ACAT ATAT ACAT ACAT ACAT ACAA
   252831  GACT *  6  23/24    GACT GACT GACT GACT GTCT GACT
   278235  ACCC *  6  22/24    ACCC AACC ACCC ACCC AACC ACCC
   280287  ACAT *  5  18/20    ACAT ACAT ACAT ACAA ATAT
   280616  TACA *  5  19/20    TACA TACA TACA TACA TATA
   288913  AAGT *  5  19/20    AAGT AAGT AAGT AAGT AAGA
   293026  ATAG *  5  19/20    ATAG ATAG AGAG ATAG ATAG
-----------------------------------------------------------------------------
 Total sequence length.........................       302937 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       31 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AATA-1    AAGT-1    AACA-1    ATAG-2    ATGT-1    ATGG-2    ATCT-1    
 ACAT-4    ACCA-1    ACCC-1    TATG-2    TACA-2    TTTA-1    TTGA-1    TTGT-1    
 TGTA-2    TGTC-1    TCAA-1    GACT-2    GTTT-1    GTTG-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290549|gb|AE003433.1|AE003433 Drosophila melanogaster genomic scaffold 142000013386054 section 17 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

     6466  CAAA *  5  18/20    CAAA CATA CAAA CATA CAAA
     6486  CATA *  5  18/20    CATA CATA CATA CATA TGTA
    12140  ACTC *  5  18/20    ACTC ACTC ACTC TCTC TCTC
    15838  TCGG *  5  18/20    TCGG TCGG TCGG TCGG TCAA
    21493  GGCT *  5  18/20    GGCT GGCT GGCT GGCT ATCT
    31826  TTCA *  6  22/24    TTCA TGCA GTCA TTCA TTCA TTCA
    37468  TATG *  5  19/20    TATG TATA TATG TATG TATG
    66273  CAAA *  5  18/20    CAAA CAAA CAAT CAAA CCAA
    67385  GTGG *  5  18/20    GTGG GTGG TTGG GTGG TTGG
    80766  TTTA *  6  24/24    TTTA TTTA TTTA TTTA TTTA TTTA
    91132  TGAT *  5  18/20    TGAT AGAT TGAT GGAT TGAT
    94134  ATCC *  5  18/20    ATCC AACC ATCC AACC ATCC
   100895  GTCA *  6  24/24    GTCA GTCA GTCA GTCA GTCA GTCA
   101121  AATG *  8  29/32    AATG ACTG AATG AATG AATG AATG AATG AGCG
   101203  GACT *  5  18/20    GACT GGCT GGCT GACT GACT
   113711  ATTC *  5  18/20    ATTC ATTC AATC ATTC AATC
   117480  GTGA *  5  18/20    GTGA GTGA GTGA GTGG GTTA
   118856  AAAG *  5  18/20    AAAG AAAA AAAG AAAA AAAG
   122141  TCTA *  5  18/20    TCTA TCTC TCTA TCTC TCTA
   124478  TTTA *  5  18/20    TTTA TTTA TTTT TTTT TTTA
   125713  ACAT *  5  20/20    ACAT ACAT ACAT ACAT ACAT
   140449  TTTA *  5  18/20    TTTA TTTA TTTA TTTT TTTT
   144826  GTTT *  8  29/32    GTTT ATTT GTTT GTTT GTTT GTTT GCTT GCTT
   147201  TATG *  5  18/20    TATG TATG TATG TATG TTCG
   154777  TACA *  5  18/20    TACA TACA TACG TACA TATA
   166155  ATTC *  5  18/20    ATTC ATCC ATCC ATTC ATTC
   166176  TTCA * 11  41/44    TTCA TTCA TTCA TTCA TTCA TTCA TTCA TTCA CTCA TTCA GTCC
   171429  TCGC *  6  22/24    TCGC TCGC TCGC TCGC TCGC TTTC
   173593  AATC *  5  19/20    AATC AATC ACTC AATC AATC
   174275  CAAA *  5  19/20    CAAA CAAA CAAA CAAA CAAC
   174711  AAAT *  5  20/20    AAAT AAAT AAAT AAAT AAAT
   184135  CAGC *  8  29/32    CAGC CAGC CAGC CAGC CAGC CAGG CAGC CAAG
   189662  TACA * 11  41/44    TACA TACA TACA TACA TACA TACA TACA TGCG TACA TACA TATA
   194692  ACCA *  5  18/20    ACCA ACCG ACCA ACCC ACCA
   195531  GTAT *  5  18/20    GTAT ATAT GTAT GTAT ATAT
   233578  ACCC *  5  18/20    ACCC AACC ACCC AACC ACCC
   253517  GGTT *  5  18/20    GGTT GGTT GGTT GGTG GGTA
   258888  TGAC * 10  36/40    TGAC TGAC TGAC TGAC TGAC TGAC TGAC TAAC TGAA TATC
   260087  TATG *  7  26/28    TATG TACA TATG TATG TATG TATG TATG
   271837  TATT *  7  26/28    TATT TTTT GATT TATT TATT TATT TATT
   275216  ATAC *  5  18/20    ATAC ACAC ATAC ATAC ATAT
   280576  ACAT *  6  23/24    ACAT ACAT GCAT ACAT ACAT ACAT
   294113  TTTG *  5  18/20    TTTG TTTG TTTT TTTG TTTT
   294931  AACC *  5  19/20    AACC ATCC AACC AACC AACC
   295986  ATCA *  6  22/24    ATCA ATCA ATCA GTCA ATCA ATCG
-----------------------------------------------------------------------------
 Total sequence length.........................       303258 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       45 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AAAG-1    AATG-1    AATC-1    AACC-1    ATAC-1    ATTC-2    ATCA-1    
 ATCC-1    ACAT-2    ACTC-1    ACCA-1    ACCC-1    TATT-1    TATG-3    TACA-2    
 TTTA-3    TTTG-1    TTCA-2    TGAT-1    TGAC-1    TCTA-1    TCGG-1    TCGC-1    
 GACT-1    GTAT-1    GTTT-1    GTGA-1    GTGG-1    GTCA-1    GGTT-1    GGCT-1    
 CAAA-3    CATA-1    CAGC-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290523|gb|AE003432.1|AE003432 Drosophila melanogaster genomic scaffold 142000013386054 section 16 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

     2784  GTCT *  5  18/20    GTCT GTCT GTCT GGCT CTCT
     8810  TACA *  7  26/28    TACA TACA TACG TACA TACA TACG TACA
     8881  ATGT *  5  18/20    ATGT ATGT ATGT GTGT GTGT
    17420  GGTG *  5  18/20    GGTG GGTG GGAG GGGG GGTG
    19577  TGAC *  9  33/36    TGAC TGAC TGGC TGAC TGAC TGAC TGAC TGAC TCTC
    21189  TTCA *  5  18/20    TTCA TTCA CGCA TTCA TTCA
    37500  ATAC *  5  18/20    ATAC AAAC ATAC ATAC ATAT
    53543  GTGA *  8  29/32    GTGA GTGT GTAA GTGA GTGA GTGA GTGA GTGT
    63883  CATA *  5  18/20    CATA CATA CATA CATA CCTC
    66297  TATG *  6  22/24    TATG TATG TATG TATG TATG TACC
    72808  ATCT *  5  19/20    ATCT ATCT ATCC ATCT ATCT
    81282  AGAT *  7  27/28    AGAT AGAT AGAT AGAT AGAT AGAT AGAA
   106743  ACAG *  5  18/20    ACAG ACAG ACAG ACAC ACAT
   154479  TATG *  5  18/20    TATG TATG TATG TATG TGTA
   155320  GGCT *  5  18/20    GGCT GGCT GGCT GGTT GGTT
   164469  TGTT *  5  18/20    TGTT TGCT TGTT TGTT TGTA
   168884  CAGT * 18  65/72    CAGT TACT CAGT CAGT CAGT CAGT CAGT CAGT CAGT CAGT CAGT CAGT CAAT CAGT CACT CAGT CATT TAGG
   168959  TCAG *  6  22/24    TCAG GCAC TCAG TCAG TCAG TCAG
   178732  ACCA *  5  18/20    ACCA ACCA GCCA ACCA ACCG
   178756  ACCA *  7  26/28    ACCA ACCG ACCA ACCA ACCG ACCA ACCA
   190889  TCCA *  5  18/20    TCCA TTCC TCCA TCCA TCCA
   193702  TTGA *  7  28/28    TTGA TTGA TTGA TTGA TTGA TTGA TTGA
   240157  TGAC *  5  18/20    TGAC TGAC TGAC TGAC TTAT
   240285  TACA *  6  22/24    TACA TATG TACA TACA TACA TACA
   259840  AGTC *  6  22/24    AGTC AGTC AGTC AGTC AGCC ATTC
   259868  AGTC * 11  40/44    AGTC AGTC AGTC AGTC AGTC AGTC AGTT AGTC AGTT AGTT AGTT
   263613  TATT *  6  23/24    TATT TACT TATT TATT TATT TATT
   273374  AACC *  8  30/32    AACC AACC AACC AACC AACC AACC AACC CAAC
   277255  ATTT *  5  18/20    ATTT ACTT ATTT ATTT ATTA
   284153  TAAA *  5  18/20    TAAA TAAA TAAG AAAA TAAA
   300291  CATA *  5  18/20    CATA CATA CATA TATA TATA
   300561  TATG *  6  23/24    TATG TATG TATG TATG TATG TGTG
   313537  GGTT *  6  23/24    GGTT GGTT TGTT GGTT GGTT GGTT
   314860  CCCT *  5  18/20    CCCT ACCT CCCT CCCT CCAT
-----------------------------------------------------------------------------
 Total sequence length.........................       319596 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       34 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AACC-1    ATAC-1    ATTT-1    ATGT-1    ATCT-1    AGAT-1    AGTC-2    ACAG-1    
 ACCA-2    TAAA-1    TATT-1    TATG-3    TACA-2    TTGA-1    TTCA-1    TGAC-2    
 TGTT-1    TCAG-1    TCCA-1    GTGA-1    GTCT-1    GGTT-1    GGTG-1    GGCT-1    
 CATA-2    CAGT-1    CCCT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290491|gb|AE003431.1|AE003431 Drosophila melanogaster genomic scaffold 142000013386054 section 15 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

     4377  TGTC *  6  22/24    TGTC TGTC TGTC TGTC TGTC CGTT
    10225  ACAT *  5  18/20    ACAT ACAT ACAT ACAT AAGT
    19946  TAAT *  5  18/20    TAAT TAAT TAAT TAAT TAGC
    29146  TATG *  8  30/32    TATG TATG CATG TATG TATG TATG TGTG TATG
    30601  CCAC *  5  18/20    CCAC ACAC ACAC CCAC CCAC
    47412  TATG *  6  22/24    TATG TATG TATG TACA TATG TATG
    62301  AGGG *  5  19/20    AGGG AGGG AGGG AGGG GGGG
    73442  GTGG *  5  19/20    GTGG GTGG GTGG GTGG GTGT
    76694  TGGC *  5  18/20    TGGC TGCA TGGC TGGC TGGC
    76971  GCCA *  5  18/20    GCCA GCCA GCCA TCCA ACCA
    76991  TCCA *  5  18/20    TCCA ACCA TCCA ACCA TCCA
    88201  ATAC *  5  18/20    ATAC ATAC ATAC ATAC ATGG
    90457  GTCA *  6  22/24    GTCA GGCA GTCA GTCA GTTA GTCA
    90481  GTTA *  5  18/20    GTTA GTCA GTTA GTCA GTTA
    96534  TAAA *  6  22/24    TAAA TAAA TGAA TAAA TAAA TAAC
   103028  TCTG *  5  18/20    TCTG TCTG TCCA TCTG TCTG
   104495  GACT *  5  18/20    GACT GACT AATT GACT GACT
   115507  CATC *  5  18/20    CATC CATC CATC CAAC CAAC
   122334  GTGG *  5  18/20    GTGG GTGT GTGG GTGT GTGG
   130910  ATAC *  8  30/32    ATAC ATAC ATAC ATAC ATAC ATAC GTAC ATAT
   155974  GTAT *  5  18/20    GTAT GTAT GTAC GTTT GTAT
   165476  TATG *  6  22/24    TATG TATG TATG TATG TTTG TGTG
   185917  CCAA *  9  34/36    CCAA CAAA TCAA CCAA CCAA CCAA CCAA CCAA CCAA
   188465  GCTG *  6  24/24    GCTG GCTG GCTG GCTG GCTG GCTG
   198115  AACC *  5  18/20    AACC AACC AACC GACC GACC
   199264  GATG *  5  18/20    GATG GTTG GATG GTTG GATG
   217407  ATAC *  5  18/20    ATAC ATAC ATAC ATAT TTAC
   221094  TCAA *  5  18/20    TCAA TCAA ACAA TCAA TCCA
   223826  GGCT *  9  33/36    GGCT GGCT GGCT GGCT GGCT GGCT GGCT GGCT TTAT
   224158  AACC *  6  22/24    AACC AACC ATCC AACC AACC ATCC
   226996  TACA *  5  18/20    TACA TACA TACA TATG TACA
   227397  TACA * 10  36/40    TACA TACA TACA TACA TACA TACA TACA TACA TATG TATG
   229775  ATGT *  5  18/20    ATGT ATGC ATGT GTGT ATGT
   249803  TATG *  5  19/20    TATG TATG TATG TATG TTTG
   254212  GATA *  5  18/20    GATA GATA GATA GATT GGTA
   271794  AAAT *  5  19/20    AAAT AAAT AAAA AAAT AAAT
   301016  ACAT *  5  18/20    ACAT AAAT ACAT ACAT ACGT
-----------------------------------------------------------------------------
 Total sequence length.........................       311408 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       37 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AACC-2    ATAC-3    ATGT-1    AGGG-1    ACAT-2    TAAA-1    TAAT-1    
 TATG-4    TACA-2    TGTC-1    TGGC-1    TCAA-1    TCTG-1    TCCA-1    GATA-1    
 GATG-1    GACT-1    GTAT-1    GTTA-1    GTGG-2    GTCA-1    GGCT-1    GCTG-1    
 GCCA-1    CATC-1    CCAA-1    CCAC-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290460|gb|AE003430.1|AE003430 Drosophila melanogaster genomic scaffold 142000013386054 section 14 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

      521  GTGC *  5  18/20    GTGC GTGC GTGC GTGT GTGT
    14133  AAAT *  5  18/20    AAAT AAAT AAAT ATAT AGAT
    25176  ATAC *  5  18/20    ATAC ATAC TCAC ATAC ATAC
    55291  ATAC *  5  18/20    ATAC AAAC ATAC ATAC ATAT
    87846  ACAG *  5  19/20    ACAG ACAG CCAG ACAG ACAG
    91458  CGGT *  5  18/20    CGGT CGGT CGGT TGGT TGGT
    91478  TGGT *  5  18/20    TGGT TGGT TGGT TTGT TGGA
   100051  TCAG *  8  30/32    TCAG TCAG TCAG TCAG TCAG TCAG TCAG TCTC
   130157  TCTG *  5  18/20    TCTG TCTG TCTG GCTG ACTG
   146706  AGAC *  5  18/20    AGAC AGAG CGAC AGAC AGAC
   155632  CAGC *  5  18/20    CAGC CTGC CAGC CAGC CAGT
   166838  GATA *  6  24/24    GATA GATA GATA GATA GATA GATA
   169453  GTGG *  6  22/24    GTGG GTGG TTGG GTGG TTGG GTGG
   169477  CTGG *  5  18/20    CTGG TTGG CTGG TTGG CTGG
   198973  TACA *  5  18/20    TACA TACA CACA TACA CACA
   200626  TACA *  6  23/24    TACA TACA TACA TACA TACA TATA
   200996  AAAT *  5  18/20    AAAT AAAT AAAT AAAT AATA
   210154  GACG *  7  26/28    GACG GACG GACG GACG GACG GACA GACA
   230363  ATAC *  7  27/28    ATAC ATAC GTAC ATAC ATAC ATAC ATAC
   234452  TATG *  5  18/20    TATG TATG TATG TAAG TAGG
   237823  ATGT *  5  18/20    ATGT ATGT ATGT ACGG ATGT
   245436  TATG *  5  18/20    TATG TATG TATA TATG TAGG
   291435  CAGC *  7  27/28    CAGC CAGC CAGC CAGC CAGC CAGC CAGT
-----------------------------------------------------------------------------
 Total sequence length.........................       294292 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       23 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-2    ATAC-3    ATGT-1    AGAC-1    ACAG-1    TATG-2    TACA-2    TGGT-1    
 TCAG-1    TCTG-1    GATA-1    GACG-1    GTGG-1    GTGC-1    CAGC-2    CTGG-1    
 CGGT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290438|gb|AE003429.1|AE003429 Drosophila melanogaster genomic scaffold 142000013386054 section 13 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

     1902  AATT *  5  19/20    AATT AATT AATA AATT AATT
    18419  TCTA *  8  29/32    TCTA TCTA TCTA TCTT TCTA TCTA TCCA TCTG
    34307  CATA *  5  18/20    CATA TGTA CATA CATA CATA
    38301  CATA *  5  18/20    CATA CATA CATA TGTA CATA
    47411  TACA *  5  19/20    TACA TACA TACA TACA TATA
    49907  TACA *  5  18/20    TACA TATG TACA TACA TACA
    60123  ACCC *  5  18/20    ACCC ACCC ACTA ACCC ACCC
    77836  ATCA *  8  29/32    ATCA ATCA ATCA ATCA ATCA ATCA ATCT ATAG
    78195  AATG *  5  19/20    AATG AATG AATG AATG AGTG
    87291  CCGA *  5  18/20    CCGA CCAA CCGA CCAA CCGA
    88985  TACA *  5  18/20    TACA CACA TACA TACA TACG
    89005  TATG *  5  19/20    TATG TATG TACG TATG TATG
   109017  TTAA *  5  18/20    TTAA TTAT TTAA CTAA TTAA
   114798  ATTT *  5  18/20    ATTT ATTT TTTT ATAT ATTT
   130057  AAAC *  6  24/24    AAAC AAAC AAAC AAAC AAAC AAAC
   130267  AAAC *  5  19/20    AAAC CAAC AAAC AAAC AAAC
   130479  TATG *  5  19/20    TATG TATG TATG TACG TATG
   142975  ATAC *  5  18/20    ATAC ATAC ATAC ATAT ATAA
   184583  GTCC *  6  22/24    GTCC GTCC GTCC GCCT GTCC GTCC
   191262  TTTG *  5  18/20    TTTG TTTG TGTT TTTG TTTG
   204669  CAGC *  5  19/20    CAGC CAGC CAGC CAGT CAGC
   206412  ATAC *  5  18/20    ATAC ATAC ATAC ATGC ATAT
   211342  GCGA *  5  18/20    GCGA GCGA GAGA GTGA GCGA
   211553  TACA *  5  18/20    TACA TACA TACA TATG TACA
   214106  TGGT *  5  18/20    TGGT TGGT TGGT TGGT TGTG
   231289  TATG *  5  18/20    TATG TGTG TATG TATG TTTG
   237095  ATAC *  5  18/20    ATAC ATAC ATAC ATAC AGAG
   251239  CCAT *  5  18/20    CCAT CCAT CCAG CCAT CCAG
   251261  ATCC *  5  18/20    ATCC ATCC AACC ACCC ATCC
   269569  TCCA * 12  44/48    TCCA TCCA TCCA TCCA TCCA TCCA ACAA TCCA TCCA ACAA TCCA TCCA
   279361  TGTT *  5  18/20    TGTT TGAT TGTT TGTT TGAT
   282535  ACCA *  5  18/20    ACCA ACCA ACCC ACTA ACCA
-----------------------------------------------------------------------------
 Total sequence length.........................       297405 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       32 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAC-2    AATT-1    AATG-1    ATAC-3    ATTT-1    ATCA-1    ATCC-1    ACCA-1    
 ACCC-1    TATG-3    TACA-4    TTAA-1    TTTG-1    TGTT-1    TGGT-1    TCTA-1    
 TCCA-1    GTCC-1    GCGA-1    CATA-2    CAGC-1    CCAT-1    CCGA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290425|gb|AE003428.1|AE003428 Drosophila melanogaster genomic scaffold 142000013386054 section 12 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

     5884  TGTA *  8  29/32    TGTA TATA TGTT TGTA TGTA TGTA TGTA TGTG
    10914  CCAT * 10  36/40    CCAT CCAT CCAT CCAT CCAT CCAT CCAT CTAT TCAT TTAT
    11809  GACG *  8  29/32    GACG GACG GACG AACG GACG AACG GACG GACA
    13037  GTAT *  5  19/20    GTAT GTAT GTAT GTAT GTGT
    30219  ACAT *  5  19/20    ACAT ACAT ACAT ACAT ACAA
    75304  TTAT *  6  22/24    TTAT TTAT TTAT TTAT TTAT TTCG
   143071  TATG *  5  18/20    TATG TATA TATG TATA TATG
   150993  AAAT *  5  18/20    AAAT ATAT ACAT AAAT AAAT
   152433  ATTC *  6  22/24    ATTC ATTC ATTC ATAC ATTT ATTC
   163966  ACAG *  6  22/24    ACAG ACAA ACAG ACAG ACAG ACAA
   172099  TGAC *  8  29/32    TGAC TAAC TGAC TGAC TGAC TGAC TGAC TCCC
   172704  ACAT * 10  37/40    ACAT ACAT ACAT ACAT ACAT ACAT ACAT ACAT ACAC ATAG
   173256  ATAC *  5  18/20    ATAC ATAC ATAC ATAC ACAT
   178710  CATA *  6  22/24    CATA CATA CATA TATG CATA CATA
   188732  TATG *  5  18/20    TATG TATG TATG TATG TACA
   189130  TATG *  5  18/20    TATG TATG TATG TATG TAGC
   189191  AAAT *  5  18/20    AAAT AATT AAAT AAAT ACAT
   195398  TACA *  5  18/20    TACA TACA TATG TACA TACA
   196394  TACA *  5  18/20    TACA TACA TATC TACA TACA
   196590  TCAG *  5  18/20    TCAG TCAG TCAG TCCG TCAA
   202880  TGTT *  5  18/20    TGTT TGTT TGTT TGTT TTTG
   208574  ATAC *  5  18/20    ATAC ATGC ATAC ATAC ACAC
   219144  ACAT *  6  22/24    ACAT ACAT ACAT ACAT ACAT ATAC
   224316  AAAT *  6  22/24    AAAT AAAT AACT AATT AAAT AAAT
   231953  CAAA *  5  18/20    CAAA CAAA CAAA CAAA TAAT
   238800  ACAA *  5  18/20    ACAA ACCA AAAA ACAA ACAA
   245470  GGAT *  5  18/20    GGAT GGAT AGAT GGCT GGAT
   253765  ATAC *  7  26/28    ATAC ATAC ATAC ATAC ATAC ATAT ATAG
   257711  ATTT *  5  18/20    ATTT ATTT ATTT AGTT TTTT
   262486  GAGC *  5  18/20    GAGC GAGC GAGC GAGA GAGA
   279454  TATG *  5  18/20    TATG TACA TATG TATG TATG
   283469  GTAT *  6  23/24    GTAT ATAT GTAT GTAT GTAT GTAT
   283750  ATGT *  6  22/24    ATGT ACAT ATGT ATGT ATGT ATGT
   284699  ATAC *  8  29/32    ATAC ATAC ATAC ATAC ATAC ATAC ATAC GTTT
   285308  ATGT *  5  19/20    ATGT ATGT ATGT ATGA ATGT
   288917  TGTA *  5  18/20    TGTA TGTA TGTG TGTA TGTG
-----------------------------------------------------------------------------
 Total sequence length.........................       301465 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       36 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-3    ATAC-4    ATTT-1    ATTC-1    ATGT-2    ACAA-1    ACAT-3    ACAG-1    
 TATG-4    TACA-2    TTAT-1    TGAC-1    TGTA-2    TGTT-1    TCAG-1    GAGC-1    
 GACG-1    GTAT-2    GGAT-1    CAAA-1    CATA-1    CCAT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290398|gb|AE003427.1|AE003427 Drosophila melanogaster genomic scaffold 142000013386054 section 11 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

     5740  GTGC *  5  18/20    GTGC GTGC GTGC GTGT GTGT
    15725  AAAT *  5  18/20    AAAT AAAT AAAT AAAT GAAA
    16142  TTTA *  6  22/24    TTTA TTTA TTTA TTTA TTTT TTTT
    27829  AACA *  5  18/20    AACA AACA AACA AAAA AAAA
    30925  ACAA *  6  22/24    ACAA ACAA ACAA AAAA AAAA ACAA
    33351  ATTT *  5  18/20    ATTT TTTT TTTT ATTT ATTT
    44840  TATT *  5  18/20    TATT TATA TATT TATA TATT
    56013  TTGA *  5  19/20    TTGA TTGA TTAA TTGA TTGA
    64512  CATA *  5  18/20    CATA CATA CATA GATA CAAA
    74866  CCAT *  6  23/24    CCAT CCAT TCAT CCAT CCAT CCAT
    76822  TTTG *  5  18/20    TTTG TTTG CTTT TTTG TTTG
    80695  TCAA *  6  24/24    TCAA TCAA TCAA TCAA TCAA TCAA
    82694  TCTG *  5  18/20    TCTG TTTG TCTG TCTG TTTG
    83655  TCTA * 11  41/44    TCTA TCTA GCTA TCTA TCAA TCTA TCTA TCTA TCTA TCTA TCTC
    91545  TGTT *  5  18/20    TGTT TGTT CGAT TGTT TGTT
    91570  GTTT * 10  36/40    GTTT GTCT GTTT GTTT GTTT GTTT GTTT GTTT GATG ATTT
    92103  TTAA *  6  22/24    TTAA TTAA TTAA TTAA TTAA CTCA
    97819  AAAG *  5  18/20    AAAG AAAG AAAG AAGG AAAA
   103875  ATGT *  5  19/20    ATGT ATGT ATGT ATGT ATCT
   106116  TTGT *  6  23/24    TTGT TTGT TTGT TTGT TTTT TTGT
   109319  CTGA *  5  18/20    CTGA CTGA CTAA CTGA CTGG
   120803  ACAT *  5  18/20    ACAT ACAT ACAT ACAT ATGT
   122334  ACAT * 10  39/40    ACAT ACAT ACAT ACAT ACAT ACAT ACAT ACAT ACAT ACGT
   128802  TATG *  5  18/20    TATG TATG TATG TACA TATG
   129849  TATG *  5  18/20    TATG TATG TATG TATG TAGA
   139280  TTCT *  6  22/24    TTCT TTCC TTCT TTCT TTCT TTCA
   143990  ATCT *  5  18/20    ATCT ATAT ATCT ATAT ATCT
   150053  TGTA *  5  18/20    TGTA TATA TGTA CGTA TGTA
   154803  ATCA * 10  37/40    ATCA ATCA ATCA ATCA ATCA ATCA ATTA ATCA ATCA AACC
   157852  CATA *  5  18/20    CATA CATA CATA TGTA CATA
   158001  TTTC *  5  18/20    TTTC TTTC TTTT TTTC TTTT
   158532  TATG *  5  18/20    TATG TACA TATG TATG TATG
   162787  ATGA * 12  45/48    ATGA ATGA ATGA ATAA ATGA ATGA ATGA ATGA ACGA ATGA GTGA ATGA
   170848  GAAA *  5  18/20    GAAA GAAA AAAA AAAA GAAA
   172020  ATAA *  6  22/24    ATAA ATAA ATAC ATAA ATAA TTAA
   182495  TATC *  5  18/20    TATC TATA TATC TATA TATC
   190342  TATG *  5  18/20    TATG TATA TATG TATG TATA
   204332  ACAT *  5  18/20    ACAT ACAT ATGT ACAT ACAT
   205301  TACA *  5  19/20    TACA TACA TTCA TACA TACA
   207594  ACAT *  5  18/20    ACAT ACAT ACAT ATGT ACAT
   208345  TACA *  6  23/24    TACA TACA TACA TACA TGCA TACA
   214535  TCTG *  5  18/20    TCTG TCTG GCTG TCTG TCTA
   216684  ATCG *  6  23/24    ATCG ATCG ATCG ATCG ATCG ATCT
   228459  ATGT * 11  42/44    ATGT GTGT ATGT ATGT ATGT ATGT ATGT ATGT ATGT ATGT GTGT
   232935  CAAA *  5  18/20    CAAA CAAA CACA CACA CAAA
   234642  GTAT *  5  18/20    GTAT GCAT GTAC GTAT GTAT
   286520  ATGT *  5  19/20    ATGT ATGT ATGT ATGT ATTT
   287666  TTTA *  5  18/20    TTTA TTTA TTTA TTTG TTTG
   297805  CCAA *  5  18/20    CCAA CCAA CCAA CCAC CCAC
-----------------------------------------------------------------------------
 Total sequence length.........................       310909 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       49 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AAAG-1    AACA-1    ATAA-1    ATTT-1    ATGA-1    ATGT-3    ATCA-1    
 ATCT-1    ATCG-1    ACAA-1    ACAT-4    TATT-1    TATG-4    TATC-1    TACA-2    
 TTAA-1    TTTA-2    TTTG-1    TTTC-1    TTGA-1    TTGT-1    TTCT-1    TGTA-1    
 TGTT-1    TCAA-1    TCTA-1    TCTG-2    GAAA-1    GTAT-1    GTTT-1    GTGC-1    
 CAAA-1    CATA-2    CTGA-1    CCAA-1    CCAT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290382|gb|AE003426.1|AE003426 Drosophila melanogaster genomic scaffold 142000013386054 section 10 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

    21176  GCCA *  7  26/28    GCCA GCCA GCCA GCCA GCCA GCCA GCTC
    22487  TATC * 10  36/40    TATC TATC TATC TATC TATC TATC TATT TCTC TATA TATA
    26371  GAAT * 10  36/40    GAAT AAAT GAAT GAAT GAAT GAAT GAAT GAAT GAAT GTTC
    36946  ATAC *  8  29/32    ATAC ATAT GTAC ATAC ATAC ATAC ATAC ATAT
    44393  TGAC *  5  18/20    TGAC TAAC TGAT TGAC TGAC
    62372  CAGT *  8  29/32    CAGT CAGT CAGT CAGT CAGT CAAT CAAT CAGC
    66193  TATG *  5  18/20    TATG TATG TATG TACA TATG
    73059  AGTC *  9  33/36    AGTC AGTC AGTC AGTC AGTC AGTT AGTT AGTT AGTC
    85713  ATCC *  5  18/20    ATCC ATCC ATGC AACC ATCC
    92848  CTAT *  6  22/24    CTAT CTAT GTAT TTAT CTAT CTAT
    98862  GATG *  5  18/20    GATG GATG GATG GATG GCCG
   100530  CATA *  5  18/20    CATA CATA CATA TATA TATA
   110439  AACA *  5  18/20    AACA AGCA AACA AACG AACA
   117686  CAAA *  5  18/20    CAAA CAAA CAAA CAAA CAGC
   132180  TATG *  6  23/24    TATG TATG TATG TATG TTTG TATG
   140723  CATA *  5  19/20    CATA CATA CATA CACA CATA
   141367  TGTA *  5  18/20    TGTA TGGA TGTA TGGA TGTA
   145549  TACA *  5  18/20    TACA TACA TACA TGCA TATA
   159448  ATCA *  5  19/20    ATCA ATCA GTCA ATCA ATCA
   164232  TCAT *  7  26/28    TCAT TCAT TCAT TCGC TCAT TCAT TCAT
   171363  TCCC *  5  18/20    TCCC TCCC TCCC CCCC CCCC
   171815  TTTA *  6  22/24    TTTA TTTA TTTA TTTA TTTT TTTT
   176801  AATG *  7  26/28    AATG AATG AATG AATG AATG AATG AGGG
   177444  TTAT *  5  19/20    TTAT TTAT TTAT TTAT TTAG
   187699  TTTG *  5  18/20    TTTG TTTG TTTG TTTC TTTC
   193058  TAAT *  5  18/20    TAAT TAAT TAAC TAAT TTAT
   210626  GATG *  6  23/24    GATG GTTG GATG GATG GATG GATG
   211939  AAAT *  5  18/20    AAAT AAAT AAAT AAAT AATG
   229622  ACTA *  5  18/20    ACTA GCTA ACTA GCTA ACTA
   230926  GAAA *  6  22/24    GAAA GAAA GAAA GAAA AGAA GAAA
   236230  AAAT *  5  18/20    AAAT CAAT GAAT AAAT AAAT
   248324  TACA *  6  22/24    TACA TACA TACA TACA TACA TGCG
   251849  CCAC *  5  18/20    CCAC CCAC CCCC CCCC CCAC
   275902  TTTA *  5  18/20    TTTA TTTA TTTA TTTA TTGG
   293386  CATA *  7  26/28    CATA CTCA CATA CATA CATA CATA CATA
   297390  ACAT *  6  23/24    ACAT ACAT ACAT ACAT ACAT ATAT
-----------------------------------------------------------------------------
 Total sequence length.........................       300193 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       36 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-2    AATG-1    AACA-1    ATAC-1    ATCA-1    ATCC-1    AGTC-1    ACAT-1    
 ACTA-1    TAAT-1    TATG-2    TATC-1    TACA-2    TTAT-1    TTTA-2    TTTG-1    
 TGAC-1    TGTA-1    TCAT-1    TCCC-1    GAAA-1    GAAT-1    GATG-2    GCCA-1    
 CAAA-1    CATA-3    CAGT-1    CTAT-1    CCAC-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290341|gb|AE003425.1|AE003425 Drosophila melanogaster genomic scaffold 142000013386054 section 9 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

    10333  ATGT *  5  18/20    ATGT ATGT ATGT ATGA ATAT
    22276  GATC *  5  19/20    GATC GATC GATC GATT GATC
    42849  AGTT *  5  19/20    AGTT AGTT AGTT ATTT AGTT
    62905  TATG *  5  18/20    TATG TATG TATG TAAG TATT
    68607  ATTT *  6  22/24    ATTT ATTT ATAT TTTT ATTT ATTT
    95733  TATG *  5  18/20    TATG TATG TATG TATG AAGG
   111320  CTGT *  5  19/20    CTGT CCGT CTGT CTGT CTGT
   112963  TACA *  5  19/20    TACA TACA TACA TACA TACT
   116286  TTTG *  5  19/20    TTTG TTTG TTTG TTTG TTTT
   116313  CTGT *  6  23/24    CTGT CTGT CTGT CTGT CGGT CTGT
   122884  TATG *  5  19/20    TATG TATG TATG TATG TATT
   125795  TAAC *  6  24/24    TAAC TAAC TAAC TAAC TAAC TAAC
   141347  AAGC *  5  18/20    AAGC AAGC AAGC CAGC CAGC
   159451  GGTC *  5  18/20    GGTC GGTC GGTC GGTC GGGA
   163072  TACA *  5  18/20    TACA TACA TACA TACG TACG
   194338  GTGA *  5  18/20    GTGA GGGA GTGA GAGA GTGA
   198753  TCCA *  6  23/24    TCCA TCCA TCCA TCCA TCCA TCCC
   225100  GTCA *  5  18/20    GTCA GCCA GTCA TTCA GTCA
   228785  ACAT *  6  22/24    ACAT ACAT ACAT ACAT CCAT ACTT
-----------------------------------------------------------------------------
 Total sequence length.........................       300205 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       19 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAGC-1    ATTT-1    ATGT-1    AGTT-1    ACAT-1    TAAC-1    TATG-3    TACA-2    
 TTTG-1    TCCA-1    GATC-1    GTGA-1    GTCA-1    GGTC-1    CTGT-2    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290316|gb|AE003424.1|AE003424 Drosophila melanogaster genomic scaffold 142000013386054 section 8 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

     8857  AGTG *  5  20/20    AGTG AGTG AGTG AGTG AGTG
    37674  AAAT *  5  18/20    AAAT GAAT AAAT AAAT AAAA
    78589  GACA *  6  22/24    GACA GACA GACA CACA GATA GACA
   100545  CCCA *  5  18/20    CCCA CCCA CCCA CACA CACA
   105305  ACGG *  5  18/20    ACGG TCGG ACGG ACGG ACGT
   105506  AAAT *  5  19/20    AAAT AAAT AAAT AAAT AACT
   110109  TTCA *  5  18/20    TTCA GCCA TTCA TTCA TTCA
   139749  TTGG *  8  29/32    TTGG TTGG TTGG TTGG TTGG TTAG ATGG TTAG
   145720  GACA *  6  23/24    GACA GACA GACA GACA GACA GGCA
   150966  TGTA *  5  18/20    TGTA TATA TGTA TGTA TGTG
   155342  TTGT *  6  22/24    TTGT TTAT TTGT TTGT TGGT TTGT
   155374  TTGT *  8  30/32    TTGT TTGT TTGT TTAT TTGT TTGT TTGA TTGT
   159478  GACA * 10  36/40    GACA GACA GACA AACA GACA GATA GACA GACA GGCA GGCA
   162521  ATGT * 11  42/44    ATGT ATGT ATTT ATGT ATGT ATGT ATGT ATGT ATGT ATGT ACGT
   170434  TGAC *  8  29/32    TGAC TAAC TGAC TGAC TGAC TGAC TGAC TGCG
   191311  TTTA *  5  18/20    TTTA CTTA TTTA TTTA TTTT
   195788  GTCA * 16  58/64    GTCA GTCA GTCA GTCA GTCA GTCA GTCA GTCA GTCA GTCA ACTA GTCA GTCA GTCA GTCA CATA
   197048  AAAC *  5  18/20    AAAC AAAC AGGC AAAC AAAC
   198392  TCTA *  9  33/36    TCTA TCTT TCTA TCTA TCTA TCTA TCTA TCTT TCAA
   198896  GCCC *  5  18/20    GCCC GCCT GCCC GCCT GCCC
   202144  GACA *  8  29/32    GACA GACA GACA GACA GACA CACA CACA CACA
   231072  ACAA *  5  18/20    ACAA ACAA ACAA ACAA AAAC
   272919  TCAT *  6  22/24    TCAT TCAT TCAT TCGT TCAT TCCT
   287032  ACCG *  5  18/20    ACCG ACCG ACCG ACCG CCCA
-----------------------------------------------------------------------------
 Total sequence length.........................       289090 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       24 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-2    AAAC-1    ATGT-1    AGTG-1    ACAA-1    ACGG-1    ACCG-1    TTTA-1    
 TTGT-2    TTGG-1    TTCA-1    TGAC-1    TGTA-1    TCAT-1    TCTA-1    GACA-4    
 GTCA-1    GCCC-1    CCCA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290252|gb|AE003423.1|AE003423 Drosophila melanogaster genomic scaffold 142000013386054 section 7 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

    30131  TTTC *  5  18/20    TTTC TTTC TTAC ATTC TTTC
    34539  TGCA *  5  18/20    TGCA TTGA TGCA TGCA TGCA
    40110  GAGC *  5  18/20    GAGC GAAC GAGC GAGT GAGC
    41639  TCAG *  5  19/20    TCAG TCAG TCAG TCAG TCAA
    56540  AAAT *  5  19/20    AAAT AAAT ATAT AAAT AAAT
    58062  TACA *  7  26/28    TACA AACA TACA TACA TACA TAAA TACA
   102545  GTCC * 13  48/52    GTCC GCCC GTCC GTCC GTCC GTCT GTCC GTCC GTCC GTCC GTCC GTCC GTAT
   155789  TCGC *  5  19/20    TCGC TAGC TCGC TCGC TCGC
   169980  AAAC *  6  22/24    AAAC AAAC AAAC AAAC AAAC AACA
   170104  AAAC *  5  18/20    AAAC AAAC AAAA AAAC AAAG
   188390  GCTC * 10  36/40    GCTC GCTC GCTC GCTC GCTC GCTC ACTC TCTC TCTC TCTC
   202839  GTTT *  5  19/20    GTTT GTTT GTTT GTTG GTTT
   211519  TGTA * 11  40/44    TGTA TATA TGTA TGTA TGTA TGCA TGTA TGCA TGTA TGTA TGTG
   212585  TATG *  5  19/20    TATG TATG TATG TATG TATA
   216717  GAGT *  5  18/20    GAGT GAGT GAGT GAGA GAGA
   219686  GCTC *  6  22/24    GCTC GCTC GCTC GCCC GCCC GCTC
   220825  AGGC *  5  18/20    AGGC AGGC AGGC AGGC AAGG
   221713  TTGT *  5  18/20    TTGT TTGT TTGT TTGT TTTC
   222043  TACA *  5  18/20    TACA TATG TACA TACA TACA
   223613  GACG *  6  22/24    GACG GACG GACG GACA GACG GACA
   227427  ATGT *  5  18/20    ATGT ATGT ATGT ATGT GTGC
   235055  TACA *  5  19/20    TACA TACA TACA TGCA TACA
   236618  ACAT *  6  22/24    ACAT ATGT ACAT ACAT ACAT ACAT
   236797  GGAG *  5  18/20    GGAG TGAA GGAG GGAG GGAG
   237846  ATAC *  6  22/24    ATAC CAAC ATAC ATAC ATAC ATAC
   241540  TATG *  6  22/24    TATG TATG TATG TATG TATG TTCG
   252334  TATG *  5  18/20    TATG TATG TACA TATG TATG
   257259  TGGA *  5  19/20    TGGA TGGA TGGA TGGA TGGG
   259545  TACA *  6  22/24    TACA TACA TACA TATG TACA TACA
   265600  TGGT *  8  29/32    TGGT TGGT GGGT TGGT TGGT TGGT TTGT TTGT
   267923  TATG *  8  29/32    TATG TACA TATG TATG TATG TATG TATG TAAG
   268538  TACA *  6  22/24    TACA TACA TATG TACA TACA TACA
   271643  CTGG *  9  33/36    CTGG CTGG CTGG CTGG CTGG TTGG GTGG CCGG CTGG
-----------------------------------------------------------------------------
 Total sequence length.........................       291976 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       33 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AAAC-2    ATAC-1    ATGT-1    AGGC-1    ACAT-1    TATG-4    TACA-5    
 TTTC-1    TTGT-1    TGTA-1    TGGA-1    TGGT-1    TGCA-1    TCAG-1    TCGC-1    
 GAGT-1    GAGC-1    GACG-1    GTTT-1    GTCC-1    GGAG-1    GCTC-2    CTGG-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290202|gb|AE003422.1|AE003422 Drosophila melanogaster genomic scaffold 142000013386054 section 6 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

     9778  GATA * 15  55/60    GATA GATA GATA GATA TATA GATA AATA GATA GATA TATA GATA AATA GATA GATA TATA
    22594  TTAT *  5  19/20    TTAT TTAT TTAT TTAT TTAC
    27435  ACTA *  6  22/24    ACTA ACTA ACTA ACTA ACTG ACTG
    27460  CTGA *  5  19/20    CTGA CTGA CTGA CTGA CTGG
    37728  CTGA *  5  18/20    CTGA CTGA CTGA CTGC CTAA
   150989  AGCC *  6  22/24    AGCC GGCC AGCC AGCC AGCC AGCG
   176406  GTGC *  6  22/24    GTGC GTGC GTGC GTGT GTGT GTGC
   183621  TATG *  5  18/20    TATG TATG AATG TTTG TATG
   204104  GACA *  5  18/20    GACA GGCA GACA GACG GACA
   216824  ATAC *  5  18/20    ATAC ATAC ATAC CTAC ACAC
   220327  GAAC *  6  22/24    GAAC GAAC GAGC GAAC GAAA GAAC
   222564  CGAG *  5  19/20    CGAG CGTG CGAG CGAG CGAG
   224507  GCTC *  5  20/20    GCTC GCTC GCTC GCTC GCTC
   239926  AAGA *  6  22/24    AAGA AAGA AAGA AAGA AAGA AACG
   265849  TGTA *  6  22/24    TGTA TGTA TGTA TCCA TGTA TGTA
   268436  AACA *  5  19/20    AACA AGCA AACA AACA AACA
   269867  TGAT *  6  22/24    TGAT TGAT TGAT TGAT TGAC CGAT
   276111  CAAT *  5  18/20    CAAT CAAT CAAT TAAT TAAT
-----------------------------------------------------------------------------
 Total sequence length.........................       300739 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       18 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAGA-1    AACA-1    ATAC-1    AGCC-1    ACTA-1    TATG-1    TTAT-1    TGAT-1    
 TGTA-1    GAAC-1    GATA-1    GACA-1    GTGC-1    GCTC-1    CAAT-1    CTGA-2    
 CGAG-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290163|gb|AE003421.1|AE003421 Drosophila melanogaster genomic scaffold 142000013386054 section 5 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

    43537  GCAG *  7  27/28    GCAG GCAG GCAG GCAG GCAG GCAG GCAC
    52435  ATTA *  5  19/20    ATTA ATGA ATTA ATTA ATTA
    55221  CCAG *  8  29/32    CCAG CCAG CCAG CCAG CCAG TCAG TCAG TCAG
    72206  CGAC *  5  19/20    CGAC CGAC CGAC CGAC CGAG
    72903  GTGC *  5  18/20    GTGC GTGC GTGT GTGT GTGC
    73270  CCAT *  5  18/20    CCAT CCAT CCAT CCAT CCCA
    75049  CCAC *  5  18/20    CCAC CCAG CCAC CCAG CCAC
    85496  ATGA *  5  18/20    ATGA ATGG ATGA ATGA ATGG
   102960  TGCG *  5  18/20    TGCG TGCG TGCG TGCG TATG
   103693  GGCT *  6  22/24    GGCT GGCT GGCT GGCT GGCT GGTG
   105609  TGCA *  5  20/20    TGCA TGCA TGCA TGCA TGCA
   125133  CAGA *  5  18/20    CAGA CACA CAGA CCGA CAGA
   125647  GTCT *  5  18/20    GTCT GTCT ACCT GTCT GTCT
   129075  GTGG *  5  19/20    GTGG GTGG GTGG GTAG GTGG
   129457  GTAT *  7  26/28    GTAT GTAA GTAT GTAT GTAT GTAG GTAT
   132229  GCCA *  6  24/24    GCCA GCCA GCCA GCCA GCCA GCCA
   143075  TGCC *  5  19/20    TGCC TGCC TGCC TGCC TGGC
   163828  TATG *  5  19/20    TATG TATG CATG TATG TATG
   164191  GGAA * 10  36/40    GGAA GGCA GGAA GGAA GGAA GGAA GGAA GGAA GGAA GTTG
   165367  TCCG *  5  20/20    TCCG TCCG TCCG TCCG TCCG
   166371  TATG *  6  22/24    TATG TATG TATG TATG TATG CAAG
   171655  ACAT *  5  20/20    ACAT ACAT ACAT ACAT ACAT
   173443  AAGA *  5  19/20    AAGA AAGA AAGA ATGA AAGA
   175207  ACTC *  5  18/20    ACTC ACTC ACTC ACAC ACCC
   175907  CGAC *  5  19/20    CGAC CGAC CGAA CGAC CGAC
   178499  CAAA * 10  36/40    CAAA CAAA CAAA CAAA CAAA CAAA CAAA CCAA CCAA ACAA
   190901  GTCA *  5  18/20    GTCA GTCA GCCA GTCA GTCC
   193068  AAAT *  5  18/20    AAAT AAAT AAAT AAAC AAGT
   195348  ATAC *  6  22/24    ATAC ATAC ATAC ATAC ATAC TCAC
   206565  ATAC *  5  18/20    ATAC ATAC ATAA ATAC ATTC
   210906  TGGT * 20  72/80    TGGT TGGT TAGT TGGT TGGT TGGT TGGT TGGT TGGT TGGT TGGT TGGT TGGT TAAT TGGT TGGT TGGT TGGT TTGA GGAG
   212129  ACAT *  5  18/20    ACAT ATGT ACAT ACAT ACAT
   212207  GACG *  8  30/32    GACG GACA GACG GACG GACG GACG GACG GACT
   229753  CCGA *  7  26/28    CCGA CCGA CCGA CCGA CCGA CCAA CCGG
   244590  GTGG *  5  18/20    GTGG ATGG GTGG ATGG GTGG
   246809  ATGG *  5  18/20    ATGG ATGG CTGG ATGG GTGG
   249415  CTGG *  5  19/20    CTGG CTGG GTGG CTGG CTGG
   254993  TCAG *  6  24/24    TCAG TCAG TCAG TCAG TCAG TCAG
   255253  CACC *  5  18/20    CACC CACA CACC CACC CACA
   259834  TATG *  5  20/20    TATG TATG TATG TATG TATG
   264576  ACTG *  6  22/24    ACTG ACTG ACTG ACTG AGTG AATG
   280243  CAGC *  5  18/20    CAGC CATC CAGC CACC CAGC
   282492  AAAT *  5  18/20    AAAT ATAT AAAT AAAT ATAT
   288431  CTGA *  5  18/20    CTGA ATGA CTGC CTGA CTGA
   288460  TGAC *  6  22/24    TGAC TGAA TGAC TGGC TGAC TGAC
   294840  GTAT *  5  18/20    GTAT GTAT GTAT GTAT GAGT
-----------------------------------------------------------------------------
 Total sequence length.........................       296497 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       46 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-2    AAGA-1    ATAC-2    ATTA-1    ATGA-1    ATGG-1    ACAT-2    ACTG-1    
 ACTC-1    TATG-3    TGAC-1    TGGT-1    TGCA-1    TGCG-1    TGCC-1    TCAG-1    
 TCCG-1    GACG-1    GTAT-2    GTGG-2    GTGC-1    GTCA-1    GTCT-1    GGAA-1    
 GGCT-1    GCAG-1    GCCA-1    CAAA-1    CAGA-1    CAGC-1    CACC-1    CTGA-1    
 CTGG-1    CGAC-2    CCAT-1    CCAG-1    CCAC-1    CCGA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290119|gb|AE003420.1|AE003420 Drosophila melanogaster genomic scaffold 142000013386054 section 4 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

     3761  CCGA *  6  22/24    CCGA CTGG CCGA CCGA CCGA CCGA
    15805  ACGG *  5  18/20    ACGG ACGG ACGG TTGG ACGG
    40862  CACT *  6  23/24    CACT CACT TACT CACT CACT CACT
    64869  ATGT *  5  18/20    ATGT ATAT ATGT ATGT ATAT
    77391  ACAG *  6  22/24    ACAG ACAG GCAG ACAG ACAG ACAA
    78550  CATA *  6  22/24    CATA CATA CATA TATA CATA TATA
    95922  TTGT *  5  18/20    TTGT TTGT TTGT TTAT TTGC
    97803  TTCA *  7  26/28    TTCA TTCA TTCA TTCA TTCA TTTA TTCG
    98117  TGAC *  8  29/32    TGAC TGGC TGAC TGAC TGAC TGAC TGGC TGGC
    99741  ATGT *  5  18/20    ATGT ATGT ATGT ACAT ATGT
   181540  GACC *  5  18/20    GACC CACC GACC GACC GAGC
   188571  ACAT *  5  18/20    ACAT ACAT ATGT ACAT ACAT
   224388  TATG *  6  22/24    TATG TATG TACA TATG TATG TATG
   234784  CTTA *  5  19/20    CTTA CTTA CTTA CTTA ATTA
   261563  CACT *  5  18/20    CACT CACT CACT CACT CAGC
   268044  TGTC *  5  19/20    TGTC TGTC TGTC TGTC TGAC
   270027  TAAC * 13  47/52    TAAC TAGC TAAC TAAC TAAT TAAC TAAC TAAC TAAC TAAC TAAC TAAC GTGC
   272494  GACT *  5  18/20    GACT GACT AACT GACT AACT
-----------------------------------------------------------------------------
 Total sequence length.........................       302855 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       18 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATGT-2    ACAT-1    ACAG-1    ACGG-1    TAAC-1    TATG-1    TTGT-1    TTCA-1    
 TGAC-1    TGTC-1    GACT-1    GACC-1    CATA-1    CACT-2    CTTA-1    CCGA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290091|gb|AE003419.1|AE003419 Drosophila melanogaster genomic scaffold 142000013386054 section 3 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

    50581  TATG *  5  18/20    TATG TATG TATG GATG TACG
   109614  TCAA *  6  22/24    TCAA TCAA GCAG TCAA TCAA TCAA
   113055  GTAT *  5  19/20    GTAT GTAT GTAT GTAT GTAC
   134571  TGTT *  5  18/20    TGTT TGTT TATT TGTT TATT
   148669  ATGT *  5  18/20    ATGT ATCT ATGT ATGT ATAT
   158643  AACA *  5  18/20    AACA ATCA AACA AACT AACA
   170535  TTTA *  6  22/24    TTTA TTTA TTTA TTTA TTTT TTTC
   174055  TAAA *  5  18/20    TAAA CAAA TAAA TAAA TACA
   192701  TATG *  6  22/24    TATG TATT TATG TATG CATG TATG
   195145  ACAA *  6  23/24    ACAA ACAA ACAA ACAA ACAA ACAC
   199133  CGGA *  5  18/20    CGGA CGGA CGGA CGGA CTGC
   206593  ACAT *  5  18/20    ACAT ACAT ATGT ACAT ACAT
   210314  TTAT *  5  19/20    TTAT TTAT TTAT TTAT TCAT
   234900  TTGG *  5  18/20    TTGG TTGG CTGG TTGG TTTG
   257988  CAGA *  8  30/32    CAGA CAGA CAGA CAGA CAGA CAGG CAGA CAGT
   267530  CTGT *  5  19/20    CTGT CTGT CCGT CTGT CTGT
   276318  TTAT *  5  18/20    TTAT TTCT TTAT TTAT TTTT
   277616  TTAA *  5  18/20    TTAA TTAA TTAA ATAA CTAA
-----------------------------------------------------------------------------
 Total sequence length.........................       299275 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       18 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AACA-1    ATGT-1    ACAA-1    ACAT-1    TAAA-1    TATG-2    TTAA-1    TTAT-2    
 TTTA-1    TTGG-1    TGTT-1    TCAA-1    GTAT-1    CAGA-1    CTGT-1    CGGA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290053|gb|AE003418.1|AE003418 Drosophila melanogaster genomic scaffold 142000013386054 section 2 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

     7892  CAAA *  5  18/20    CAAA CAAA AACA CAAA CAAA
     9616  AATC *  5  18/20    AATC AATC AATG TATC AATC
    20073  AGTC *  5  18/20    AGTC AGTC ATTT AGTC AGTC
    21552  AAGT *  5  18/20    AAGT AAGT CAGA AAGT AAGT
    38257  AAAT *  5  18/20    AAAT AAAT AAAT ACAC AAAT
    86173  GTAT *  6  22/24    GTAT GCAT GTAT GTAT GTAT GTTT
   113393  GTCC *  5  18/20    GTCC GTTC GTCT GTCC GTCC
   131677  ATAC *  8  31/32    ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAT
   134221  TATT *  5  18/20    TATT TATA TATT TATT TAAT
   150883  GTAT *  6  22/24    GTAT GTAT GTAT GTAT GTAC GTGT
   157154  TCCA *  5  19/20    TCCA TCCA TCCA TCCA TCCC
   179030  ACTG *  5  18/20    ACTG ATTG ACTG ACTG GCTG
   187291  TTTG *  5  19/20    TTTG TTTG TTTG CTTG TTTG
   201435  CAAA *  6  22/24    CAAA CAAA CAAA CAAA CGAG CAAA
   214409  TACA *  5  18/20    TACA TACA TACA TATA TATA
   225925  TGTT *  5  18/20    TGTT TGCT TGTT TGTT TGTC
   232725  TTCC *  5  18/20    TTCC ATCC TTCC TTCC TACC
   253245  AGAA *  5  18/20    AGAA AGAA TGAA AGAA AGGA
-----------------------------------------------------------------------------
 Total sequence length.........................       299970 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       18 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AATC-1    AAGT-1    ATAC-1    AGAA-1    AGTC-1    ACTG-1    TATT-1    
 TACA-1    TTTG-1    TTCC-1    TGTT-1    TCCA-1    GTAT-2    GTCC-1    CAAA-2    
----------------------------------------------------------------------------


Genomic sequence...
gi|7290018|gb|AE003417.1|AE003417 Drosophila melanogaster genomic scaffold 142000013386054 section 1 of 35, complete sequence
 Position  Repeat    Coverage  Repeat 

    53242  TTTG *  5  18/20    TTTG TTTG TGTT TTTG TTTG
    58496  TATT *  5  18/20    TATT TTTT TTTT TATT TATT
    69542  CTGA *  5  18/20    CTGA TTGA CTGA CTGA CTGT
    85153  GACT *  5  18/20    GACT GACT ACCT GACT GACT
   127397  GATC *  5  19/20    GATC GATC GATC GATC GATG
   134569  TTAT *  5  18/20    TTAT TGAT TTAT TTAT TTAA
   184013  ATAC *  5  18/20    ATAC ATAC AGGC ATAC ATAC
   200565  AAAC *  5  18/20    AAAC AAAC AAAC AAAC AGAG
   227106  ATAC *  7  26/28    ATAC ATAC ATAC ATAC ATTC ATAC ATAG
   278663  TCTA *  5  18/20    TCTA TCTC TCTC TCTA TCTA
   306621  TTGG *  5  18/20    TTGG GTGG TTGG GTGG TTGG
-----------------------------------------------------------------------------
 Total sequence length.........................       314661 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       11 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAC-1    ATAC-2    TATT-1    TTAT-1    TTTG-1    TTGG-1    TCTA-1    GATC-1    
 GACT-1    CTGA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7289092|gb|AE002987.1|AE002987 Drosophila melanogaster genomic scaffold 142000013385379, complete sequence
 Position  Repeat    Coverage  Repeat 

    28374  ATAC *  5  18/20    ATAC ATAC ATAC ATAC ATTA
    58787  AAAT *  6  22/24    AAAT AAAT AAAT AAGT AAAT AAAA
    69389  TGTA *  5  20/20    TGTA TGTA TGTA TGTA TGTA
-----------------------------------------------------------------------------
 Total sequence length.........................       71090 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       3 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    ATAC-1    TGTA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7289791|gb|AE002991.1|AE002991 Drosophila melanogaster genomic scaffold 142000013385979, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       7017 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7316106|gb|AE002593.1|AE002593 Drosophila melanogaster genomic scaffold 142000013386053, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       0 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7293636|gb|AE003513.1|AE003513 Drosophila melanogaster genomic scaffold 142000013386053 section 30 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

    16002  GATC *  6  22/24    GATC AATC GATC GATC GATC GACC
    16368  ACAT *  5  18/20    ACAT ACAT ACAT ATGT ACAT
    46192  ACAT *  5  18/20    ACAT ACAT ACAT ACAT ATGT
    53127  GCCA *  7  26/28    GCCA GCCA GCCA GCCA GCCA GCCA TCCG
    54602  CTGT *  5  18/20    CTGT ATGT CTGT CTGT CTGC
    54636  CTCA * 11  40/44    CTCA CTCA CTTA CTCA CTCA CTCA CTCA CTCA CTTA CTCG CTCG
    63090  AAAT *  6  23/24    AAAT AAAT AAAT AAAT AAAT AAAA
    72904  ATAC *  8  29/32    ATAC ATAC ATAC ATAC ATAC ATAC ATTT ATAT
    74002  TACA *  5  18/20    TACA TACA TATA TAGA TACA
    75517  CATA *  5  18/20    CATA CATA CATA TGTA CATA
    75981  AGGG *  5  18/20    AGGG AGGG AGGG GGGG GGGG
    95323  ACAT *  5  18/20    ACAT ACAT ACAT GCAT ACAC
    96795  AAAT *  5  18/20    AAAT AAAT ATAT AAAT ATAT
   117499  ATGT *  7  28/28    ATGT ATGT ATGT ATGT ATGT ATGT ATGT
   118166  TACA *  6  22/24    TACA TACA TACA TACA TACA TATG
   121933  CTAT *  7  27/28    CTAT CTAT CTAT CTAT CTAT CTAT CTAC
   129297  TATG *  5  18/20    TATG TATG TATG TATT AATG
   141599  GACA *  6  22/24    GACA GACG GATA GACA GACA GACA
   142177  TTGT *  5  18/20    TTGT TTGT TTTT TTTT TTGT
   146201  TATG *  5  19/20    TATG TATG TATG TATG TGTG
   150879  GAAA *  5  18/20    GAAA GTAA GAAA GTAA GAAA
   152727  ATAC *  5  18/20    ATAC ATAC ATAC ATAT ATAA
   156081  TAAA *  6  22/24    TAAA TAAA TAAT TAAA TAAA TAAT
   161874  GCGA *  5  18/20    GCGA GCGA GCGA GTGA GTGA
   169640  TTTA *  5  18/20    TTTA TTTA TGTT TTTA TTTA
   180474  AGTT *  8  30/32    AGTT GGTA AGTT AGTT AGTT AGTT AGTT AGTT
   197958  TATG *  5  18/20    TATG TATG TAAA TATG TATG
-----------------------------------------------------------------------------
 Total sequence length.........................       207355 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       27 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-2    ATAC-2    ATGT-1    AGTT-1    AGGG-1    ACAT-3    TAAA-1    TATG-3    
 TACA-2    TTTA-1    TTGT-1    GAAA-1    GATC-1    GACA-1    GCGA-1    GCCA-1    
 CATA-1    CTAT-1    CTGT-1    CTCA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7293579|gb|AE003512.1|AE003512 Drosophila melanogaster genomic scaffold 142000013386053 section 29 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

      303  TGAC *  5  18/20    TGAC AGAC TGAC TAAC TGAC
      325  ACTG *  5  18/20    ACTG ACTC ACTG ACTA ACTG
      349  ACTG *  8  30/32    ACTG ACTA ACTG ACTG ACTG ACTG ACTG ACTT
    10864  CCAT * 11  40/44    CCAT CCAT CCAT CCAT CCAT CCAT CCAA GCGT CCAT CCAT TCAT
    18416  CACC *  5  18/20    CACC CACC CACC AACC AACC
    27209  ACTG *  5  18/20    ACTG ACTA ACTG ACTG AATG
    27230  CTGA *  5  18/20    CTGA CTGT CTGA CTGA CTGG
    29316  GCTG *  5  18/20    GCTG GCTG GCTG GTTG GTTG
    38560  AGTC *  6  22/24    AGTC AGTC AGTC AGTC AGTC AGCT
    63319  CTGG *  8  30/32    CTGG ATGG TTGG CTGG CTGG CTGG CTGG CTGG
    69190  CATA *  7  27/28    CATA CATA CATA CATA CATA CATA CATG
   101627  TGTT *  6  23/24    TGTT TGTT TGTT TGTT TGTT TGTG
   127566  TACA *  6  23/24    TACA TTCA TACA TACA TACA TACA
   139476  ATCC *  9  34/36    ATCC ATCC ATCC ATCC ATCC ATCC ATCC ATCT ATCT
   155147  GATG * 11  40/44    GATG GATG GACG GATG GATG GACG GATG GATG GATG GATG GTCG
   156683  ATAG *  5  19/20    ATAG ATAG ATAG ATAG ATAT
   162197  GTAT *  5  18/20    GTAT GTAT GTAT GTAT ATAC
   173026  TTTG *  5  18/20    TTTG CTTG CTTG TTTG TTTG
   173101  TTAT *  5  18/20    TTAT TTAT TTAT TTAT GTTT
   198605  TAAA *  5  18/20    TAAA TAAG TAAA TAAA TGAA
   207863  TACA *  5  18/20    TACA TACG TGCA TACA TACA
   209825  TACA *  5  18/20    TACA TACA TACA TACA TATG
   211796  CATA *  6  22/24    CATA CATA CATA TGTA CATA CATA
   212002  TACA *  5  19/20    TACA TACA TACA TACG TACA
   218809  TATG *  5  18/20    TATG TATG TATG TATT TAGG
   233241  TATG *  5  19/20    TATG TATA TATG TATG TATG
   238799  ATAC *  6  22/24    ATAC ACTC ATAC ATAC ATAC ATAC
   242681  ACAT *  6  23/24    ACAT GCAT ACAT ACAT ACAT ACAT
   249012  AATT *  6  22/24    AATT CATT AAAT AATT AATT AATT
   249351  AAAT *  5  18/20    AAAT AAAT AAAT TAAT AACT
   253603  AGCC *  6  22/24    AGCC AGCC AACC AGCC AGCG AGCC
   278089  TATG *  5  19/20    TATG TATG TATG TATG TATA
   289610  GGCT *  9  33/36    GGCT GGCT GGCT GGCC GGCT GGCT GGCT GGCC GGGT
   291806  TGTA *  6  22/24    TGTA TGTA TGTA TGTA CATA TGTA
-----------------------------------------------------------------------------
 Total sequence length.........................       301656 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       34 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AATT-1    ATAG-1    ATAC-1    ATCC-1    AGTC-1    AGCC-1    ACAT-1    
 ACTG-3    TAAA-1    TATG-3    TACA-4    TTAT-1    TTTG-1    TGAC-1    TGTA-1    
 TGTT-1    GATG-1    GTAT-1    GGCT-1    GCTG-1    CATA-2    CACC-1    CTGA-1    
 CTGG-1    CCAT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7293536|gb|AE003511.1|AE003511 Drosophila melanogaster genomic scaffold 142000013386053 section 28 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

      842  CCAC *  5  18/20    CCAC CCAG CCAC CCAG CCAC
    12695  ATAA *  6  22/24    ATAA ATAA ATAA ATAA ATAA ATGT
    31061  CATT *  5  19/20    CATT CACT CATT CATT CATT
    71568  ATAC *  6  22/24    ATAC ATAC ATAC ATAT ATAC ATAT
    73944  TGGT *  5  18/20    TGGT CGGT CGGT TGGT TGGT
    88444  CAAA *  5  18/20    CAAA CAAA AACA CAAA CAAA
    95428  TACA *  5  18/20    TACA TACA TACA TATG TACA
    98122  TTTA *  5  18/20    TTTA TTTA TTTA TTTT TTTT
   104949  ATAC *  5  18/20    ATAC ATAT GTAC ATAC ATAC
   105612  TATG *  5  18/20    TATG TATG TATG TGTA TATG
   128194  CCAC *  5  18/20    CCAC CAAC CCAC CCAC CTAC
   141317  CCAA *  7  26/28    CCAA CCAA CCAA CCAA CCAA CCAA GCAC
   146018  GGTG *  6  22/24    GGTG GGTG GTTG GGTG GTTG GGTG
   154297  TTTA *  5  18/20    TTTA TATA TTTA TTTA TTAA
   172185  ATAG *  5  18/20    ATAG ATAG ATAT ATAG ATAT
   175081  GGTC *  8  30/32    GGTC TGTC GGTC GGTC GGTC GGTC GGTC GGTG
   233593  ATGG * 15  54/60    ATGG ATGG ATGG ATGG ATGG ATGG ATGG GTGG ATGG ATGG ATGG ATGG TTGG ATGG GATA
   234618  CTGT *  5  18/20    CTGT CTGT CTGT CTGC CTGG
   236551  TATG *  6  22/24    TATG TACA TATG TATG TATG TATG
   237699  CCAG *  5  18/20    CCAG CCAG CCAG CCAG TCAT
   238400  AAAT *  5  18/20    AAAT AAAT AAAT AAAT AGAA
   238860  TTGA *  5  18/20    TTGA TTGT ATGA TTGA TTGA
   246083  TATT *  5  20/20    TATT TATT TATT TATT TATT
   250375  TTGG *  5  19/20    TTGG TTGG TTGG TTGG TCGG
   252531  TACA *  5  19/20    TACA TACA TACG TACA TACA
   269858  ATAC *  5  19/20    ATAC ATAC ATAC ATAC ATAT
   273955  TATG *  7  26/28    TATG TATG TATG TATG TATG TATG TGTT
   284891  ATGT *  8  30/32    ATGT ACAT ATGT ATGT ATGT ATGT ATGT ATGT
   291379  AAAT *  9  34/36    AAAT AGAT AAAT AAAT AAAT AAAT AGAT AAAT AAAT
   293630  GTTT * 10  36/40    GTTT GTTT GTTT GTTT GTTT GCTT GTTT GTTT GCTT CTTG
   301493  CATA *  5  18/20    CATA TGTA CATA CATA CATA
   305742  TGTA * 11  41/44    TGTA TGTA TGTA CGTA TGAA TGTA TGTA CGTA TGTA TGTA TGTA
   306981  ATAC *  5  18/20    ATAC ATAC ATAC ATAC GTAT
   310957  ACAA *  5  18/20    ACAA AAAA ACAA ACAA AAAA
   311610  GAAC *  7  27/28    GAAC GAAC GAAC GAAC GAAC GAAC GAAA
   319628  ACCC *  5  18/20    ACCC AACC ACCC AACC ACCC
   324115  ATGG *  5  20/20    ATGG ATGG ATGG ATGG ATGG
   328617  GCCT * 11  42/44    GCCT GACT GCCT GCCT GCCT GCCT GCCT GCCT GCCT GCCT GCCC
   333704  ACCA *  5  19/20    ACCA ACCA ACCA AACA ACCA
   335923  CCAA * 10  36/40    CCAA CCAA CCAA CCAA CCAA CCAA CCAA CCAT CCAG GCAT
   338004  AGGC *  5  19/20    AGGC AGGC AGGC GGGC AGGC
   341021  TACA *  5  18/20    TACA TACA TACA TACG GACA
   341143  CCAG *  7  26/28    CCAG CCAG CCAG CCAG CTAG CCAG CCGG
   341398  CGGA *  5  18/20    CGGA TGGA CGGA TGGA CGGA
-----------------------------------------------------------------------------
 Total sequence length.........................       343711 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       44 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-2    ATAA-1    ATAG-1    ATAC-4    ATGT-1    ATGG-2    AGGC-1    ACAA-1    
 ACCA-1    ACCC-1    TATT-1    TATG-3    TACA-3    TTTA-2    TTGA-1    TTGG-1    
 TGTA-1    TGGT-1    GAAC-1    GTTT-1    GGTG-1    GGTC-1    GCCT-1    CAAA-1    
 CATA-1    CATT-1    CTGT-1    CGGA-1    CCAA-2    CCAG-2    CCAC-2    
----------------------------------------------------------------------------


Genomic sequence...
gi|7293504|gb|AE003510.1|AE003510 Drosophila melanogaster genomic scaffold 142000013386053 section 27 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

    57822  TGTA *  5  18/20    TGTA TGAG TGTA TGTA TGTA
    59283  ATGT *  5  18/20    ATGT ATGT ATGT ACAT ATGT
    80016  TATG *  5  19/20    TATG TATG TATG TATG CATG
    83220  AATA *  5  18/20    AATA AATA AATA AAAA CATA
   113146  TATG *  5  18/20    TATG TATA TATG TATG TATA
   113753  AAAC *  6  22/24    AAAC AAAC AAAC AAAC AAAA CAAC
   114267  TGTT *  5  18/20    TGTT TGTC TGTT TGTT TGTC
   132358  ACAT *  5  18/20    ACAT ACAT ACAT ACAT TAAT
   145277  CCAA *  5  18/20    CCAA CCAA CCAA CCGC CCAA
   145498  ACCA *  8  29/32    ACCA CCCA ACCA ACCA ACCA ACCA ACCA CCCG
   149520  GGTG *  5  18/20    GGTG GGCG CGTG GGTG GGTG
   151965  TGTT *  5  19/20    TGTT TGTT TGTT TGTT TGTG
   176336  ATGG *  6  23/24    ATGG ATGG ATGG ATGG ATGG ATAG
   176655  TTGT *  5  18/20    TTGT TTGT TTGT TTAT TTGC
   191977  ATGT *  5  18/20    ATGT ATGT TTGT ATTT ATGT
   192552  CATA *  5  18/20    CATA CATA CATA TATA TATA
   198731  TATG *  6  23/24    TATG TATG TATG TATG TATG TATA
   214783  TTAT *  5  18/20    TTAT TTAT TTTT TTTT TTAT
   216698  GTTT *  6  22/24    GTTT GTTT GTTT GCTT GTTG GTTT
   218943  TATG *  6  22/24    TATG TACA TATG TATG TATG TATG
   251780  AGCT *  5  18/20    AGCT AGCT AGCT AGCT AGGA
   257486  TACA *  5  18/20    TACA TACA TACA TATA TATA
   261358  ACGG *  5  18/20    ACGG ACAG ACGA ACGG ACGG
   264345  ATGT *  5  18/20    ATGT ATGG ATGT ATGT ATGA
   266563  TCAG *  5  18/20    TCAG TCAG TCAG TCAA TCAT
   281249  GAGT *  5  18/20    GAGT GAGT GAGT GTGT GTGT
   287532  GCTG *  5  18/20    GCTG GCTG CCTG CCTG GCTG
   292748  TTTC *  5  18/20    TTTC TTTT TTTC TTTT TTTC
-----------------------------------------------------------------------------
 Total sequence length.........................       298477 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       28 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAC-1    AATA-1    ATGT-3    ATGG-1    AGCT-1    ACAT-1    ACGG-1    ACCA-1    
 TATG-4    TACA-1    TTAT-1    TTTC-1    TTGT-1    TGTA-1    TGTT-2    TCAG-1    
 GAGT-1    GTTT-1    GGTG-1    GCTG-1    CATA-1    CCAA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7293467|gb|AE003509.1|AE003509 Drosophila melanogaster genomic scaffold 142000013386053 section 26 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

     9993  ATTC *  5  19/20    ATTC ATTC ACTC ATTC ATTC
    11193  ATGT *  6  22/24    ATGT ATGT ATGT ATGT ATGT ATTC
    25019  GGAT *  5  19/20    GGAT GGAT GAAT GGAT GGAT
    39622  TGTT *  5  19/20    TGTT TGTT TGTT TATT TGTT
    63785  TGAC *  5  18/20    TGAC CGAC TGAC TGAC TGAA
    71323  TACA *  5  18/20    TACA TATG TACA TACA TACA
    71797  CACT *  7  26/28    CACT CACT CACT CACT CACT CGCT CACC
    82435  TAAA *  6  23/24    TAAA TAAA TAAA TAAA TAAA TACA
    94677  TGAA *  5  18/20    TGAA TGAC TGAC TGAA TGAA
    95507  CATC *  5  18/20    CATC CATC CATC CGTC AATC
   100604  TCGG *  6  22/24    TCGG TCGG TCGG TCGG TCGG TTAG
   106783  TACA *  6  22/24    TACA CACA TACA TACA TACA TATA
   110318  CAAG *  5  18/20    CAAG CCAG TAAG CAAG CAAG
   127987  TTGT *  5  18/20    TTGT TTGT TTGT TTGT TTAC
   132514  TATG *  9  33/36    TATG TGTG TATG TATG TATG TATG TATG TGTG TGTG
   139311  CATA *  6  22/24    CATA CAAA CATA CATA CATA CAAA
   139700  GTCA *  5  18/20    GTCA GCCA GTCA GCCA GTCA
   171014  TACA *  5  18/20    TACA TACA TACA TACA TAGG
   174344  ATGT *  5  18/20    ATGT ATGT ATGT ATGT AGTT
   189292  GCCT *  8  29/32    GCCT GCCT GCCT GCCT GCCT GCCC GTCT GTCT
   191211  ACAT *  5  18/20    ACAT ATGT ACAT ACAT ACAT
   192621  GAGT *  5  19/20    GAGT GAGT GAGT GAGT AAGT
   195044  TGCA *  5  18/20    TGCA CGCA TGCA TACA TGCA
   196501  GGAT *  5  18/20    GGAT GGAT GGAT AGAT GGAG
   211042  TGGT *  5  18/20    TGGT TGGA TGGT TGGC TGGT
   215979  ATTT *  6  22/24    ATTT TTTT ATTT ATTT ATTT TTTT
   216742  GACG *  8  30/32    GACG GACG GACG GACG GACG GACG GACG TTCG
   226788  GATC *  9  35/36    GATC GATC GATC GATC GATC GATC GATC GTTC GATC
   229867  TCCA *  5  18/20    TCCA TCCA GCCG TCCA TCCA
   238398  TACA *  6  22/24    TACA TACA TACA TACA TATA TATA
   261908  GCTG *  5  20/20    GCTG GCTG GCTG GCTG GCTG
   265904  TACA *  6  22/24    TACA TACA TATA TACA TATA TACA
   268769  GTAT *  5  18/20    GTAT GTAT GTAT ATAT ATAT
   279096  TACA *  6  22/24    TACA TATG TACA TACA TACA TACA
   291014  GATG *  9  33/36    GATG GATG GATG AATG GATG GATG GATG GATG GGGG
   296533  ATGG *  6  23/24    ATGG ATGG ATGG ATGG ATGG TTGG
-----------------------------------------------------------------------------
 Total sequence length.........................       303819 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       36 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATTT-1    ATTC-1    ATGT-2    ATGG-1    ACAT-1    TAAA-1    TATG-1    TACA-6    
 TTGT-1    TGAA-1    TGAC-1    TGTT-1    TGGT-1    TGCA-1    TCGG-1    TCCA-1    
 GATG-1    GATC-1    GAGT-1    GACG-1    GTAT-1    GTCA-1    GGAT-2    GCTG-1    
 GCCT-1    CAAG-1    CATA-1    CATC-1    CACT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7293431|gb|AE003508.1|AE003508 Drosophila melanogaster genomic scaffold 142000013386053 section 25 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

     1220  TTTG *  6  22/24    TTTG TTTG TTTG TTCG TTTG TTGG
     9585  TTAT *  5  18/20    TTAT TTAT TTAT TTGT TTGT
    21646  TAAA *  5  18/20    TAAA TATA TATA TAAA TAAA
    22689  ACAT *  6  24/24    ACAT ACAT ACAT ACAT ACAT ACAT
    33577  ATTT *  5  20/20    ATTT ATTT ATTT ATTT ATTT
    36278  ATTT *  5  18/20    ATTT ATTT ATTT TTTT TTTT
    37615  CAGC *  8  29/32    CAGC CGGC CAGC CAGA CAGC CAGC CAGC CAGG
    41933  TTTA *  5  19/20    TTTA TATA TTTA TTTA TTTA
    55982  ATGT *  5  19/20    ATGT ATAT ATGT ATGT ATGT
    75504  TATT *  6  23/24    TATT TATT TATT TATT TATT TATA
    88905  ATAA *  5  18/20    ATAA ATAA ATAA ATAA GTTA
    91536  CGAG *  5  18/20    CGAG TGAG CGAA CGAG CGAG
    91556  TGAG *  5  18/20    TGAG TGAG TGAG TGAG TGCA
    92742  AGCC *  5  18/20    AGCC AGCT AGCC AGCC AGTC
    96851  TTAT *  5  18/20    TTAT TTAT TTGT TTAT TAAT
    98642  TTAT *  5  18/20    TTAT TTAT TTAT TTTT TGAT
   103580  ATCG *  6  23/24    ATCG ATCG ATGG ATCG ATCG ATCG
   106107  ATCC *  6  22/24    ATCC ATCC GTCC ATCC ATCC ATCT
   138998  CGGA *  5  18/20    CGGA CGGA CAGG CGGA CGGA
   157222  ACCG *  5  19/20    ACCG ACCA ACCG ACCG ACCG
   159735  TTGT *  5  18/20    TTGT TTGT TTGT TTGC TTGC
   161628  ATCT *  7  26/28    ATCT ATCT ATGT ATCT ATCT ATCT ATCG
   164232  GGGT *  6  22/24    GGGT GAGT GGGT GAGT GGGT GGGT
   172721  TTGT *  6  22/24    TTGT TTGT TGGT TTGT TTGT TTGC
   173518  TATG *  5  19/20    TATG CATG TATG TATG TATG
   178509  ATAA *  5  18/20    ATAA ATAA ATAA ATAC AAAA
   217683  TATG *  5  18/20    TATG TATG TATA TATG TATA
   225594  CAAC *  5  18/20    CAAC CAAC CAAC AAAC AAAC
   247151  GGAT *  5  18/20    GGAT GGGT GGAT GAAT GGAT
   248720  ATGT *  5  18/20    ATGT ATCT ATGT ATGT ATCT
   254433  ACAT *  6  22/24    ACAT GTAT ACAT ACAT ACAT ACAT
   288252  GATG *  5  18/20    GATG GCTG GATG GCTG GATG
   289684  CTGT *  6  22/24    CTGT CTGC CTGT CTGT CTGT GTGT
   291003  GTAT * 12  44/48    GTAT GTAT GTAT GTAT GTAT GTAT GTAT GTAT GTAT GTAT ATAT TTGG
   291401  TATG *  5  18/20    TATG TATG TATG TATG TTAG
   291708  CCTT *  5  20/20    CCTT CCTT CCTT CCTT CCTT
   297384  GCCA *  5  18/20    GCCA GCCA GCCA GCCA GTAA
   300533  TCCA *  5  18/20    TCCA ACCA TCCA TCCA TTCA
-----------------------------------------------------------------------------
 Total sequence length.........................       300919 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       38 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATAA-2    ATTT-2    ATGT-2    ATCT-1    ATCG-1    ATCC-1    AGCC-1    ACAT-2    
 ACCG-1    TAAA-1    TATT-1    TATG-3    TTAT-3    TTTA-1    TTTG-1    TTGT-2    
 TGAG-1    TCCA-1    GATG-1    GTAT-1    GGAT-1    GGGT-1    GCCA-1    CAAC-1    
 CAGC-1    CTGT-1    CGAG-1    CGGA-1    CCTT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7293394|gb|AE003507.1|AE003507 Drosophila melanogaster genomic scaffold 142000013386053 section 24 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

    13604  GTAT *  5  18/20    GTAT GTGT GTGT GTAT GTAT
    15737  ATGT *  5  18/20    ATGT ATGT ATAT ATGT ATGG
    16510  TTGC *  5  18/20    TTGC TTGC ATTC TTGC TTGC
    20195  TTTA *  5  18/20    TTTA TTTA TTTA TTTT TTTT
    24041  ATAC *  9  33/36    ATAC AAAT ATAC ATAC ATAC ATAC ATAC ATAC ATAT
    27105  ATAC *  5  18/20    ATAC ATAC ATAC ACAC ACAC
    28181  CGGA *  5  19/20    CGGA CGGA CGGA CGGA CGGT
    64008  AGTC *  5  18/20    AGTC AGTC AGTG AGTC AGAC
    70087  TTGT *  5  20/20    TTGT TTGT TTGT TTGT TTGT
    72590  TATG *  5  18/20    TATG TGTG TATG TATA TATG
    80045  TATG *  6  23/24    TATG TACG TATG TATG TATG TATG
    82892  TTTA *  5  18/20    TTTA TTTA TTTA TTTA TTAC
    88396  ATCA *  6  22/24    ATCA ATCA ATCA ATCG TTCA ATCA
    88421  TCAA *  6  23/24    TCAA TAAA TCAA TCAA TCAA TCAA
    94505  TTAT *  5  19/20    TTAT TTAT TTAT TTAT TTAG
   103137  CGGA *  5  18/20    CGGA CGGA CGGA GGGG CGGA
   106224  GAAT *  7  26/28    GAAT GAAT GAAT GACT GAGT GAAT GAAT
   111877  TATT *  5  18/20    TATT TATT TATA TATT TGTT
   112760  CCCA *  5  18/20    CCCA ACCA CCCA ACCA CCCA
   126352  TGAT *  6  24/24    TGAT TGAT TGAT TGAT TGAT TGAT
   127185  ACCA *  5  18/20    ACCA ACCA ACCA ACCA CCAA
   135957  ACTG *  6  22/24    ACTG ACTG ATTG ACTG ACTG AATG
   136006  CTGA * 17  63/68    CTGA CTAA CTGA CTGA CCGA CTGA CTGA CGGA CTGA CTGA CTGA CTGA CTGA TTGA TTGA CTGA CTGA
   139965  TTTA *  5  18/20    TTTA TTTA TTTA TTTG TTAA
   144360  CGGA *  8  29/32    CGGA CGGT CGGA CGGA CGGA CGGA CAGA CAGA
   154118  CTGG *  5  18/20    CTGG CTTC CTGG CTGG CTGG
   161896  ACAA *  5  18/20    ACAA ACAA AAAA TCAA ACAA
   199341  TACA *  5  18/20    TACA TACA AACA TATA TACA
   252706  GCGA *  8  29/32    GCGA GTAA GCGA GCGA GCGA GCGA GCGA GCCA
   252995  AGAT *  6  22/24    AGAT CGAT AGAT AGAT AGCT AGAT
   256433  GTTT *  6  22/24    GTTT GGTT GTTT GTTT GTTT GATT
   274073  TATG *  5  18/20    TATG TACA TATG TATG TATG
   277326  TGCG *  6  22/24    TGCG TGAG TGCG TGCG TGCG TGAG
   285854  TACA *  5  18/20    TACA TACA TACA TATG TACA
   289130  ACAT *  5  18/20    ACAT ACAT ACAA ACAT ATAT
-----------------------------------------------------------------------------
 Total sequence length.........................       297165 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       35 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATAC-2    ATGT-1    ATCA-1    AGAT-1    AGTC-1    ACAA-1    ACAT-1    ACTG-1    
 ACCA-1    TATT-1    TATG-3    TACA-2    TTAT-1    TTTA-3    TTGT-1    TTGC-1    
 TGAT-1    TGCG-1    TCAA-1    GAAT-1    GTAT-1    GTTT-1    GCGA-1    CTGA-1    
 CTGG-1    CGGA-3    CCCA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7293355|gb|AE003506.1|AE003506 Drosophila melanogaster genomic scaffold 142000013386053 section 23 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

     9379  ACAA *  5  18/20    ACAA ACAA ATAA ACAA ACAG
    10711  GTAA *  5  18/20    GTAA GTAA GTAA GTAA TTTA
    14123  TGTT *  5  18/20    TGTT TGTT TGTT TGTT TTCT
    36558  TACA *  6  22/24    TACA TACA TACA TACA TATA TGCA
    38887  ATAA *  5  18/20    ATAA ATAA ATAG ATAA ATAC
    95461  ATGA *  6  22/24    ATGA ATAA ATGA ATGA ATGA ATGG
   145671  AAAC *  5  18/20    AAAC AAAC AAAA AAAA AAAC
   148740  TACA *  5  18/20    TACA TACA TACA TACA TATG
   165698  TACA *  5  18/20    TACA TACA TACA TATA TATA
   171779  ATGT *  5  19/20    ATGT ATGT ATGT ATGT ATAT
   180353  ATGT *  6  22/24    ATGT ATGT ATGT ATGT ATGC ATCT
   180543  ATGG *  6  23/24    ATGG ATGG ATGG ATGG TTGG ATGG
   184635  GGAT *  6  22/24    GGAT GAAT GGAT GGAT GGTT GGAT
   184940  ACAT *  5  18/20    ACAT ACGT ACAT ACAT ACGT
   185390  TGAG *  8  30/32    TGAG TGAG TGAG TGAG TGAG TGAG TGTG TGAC
   215467  GAGG *  5  18/20    GAGG GAGG GAGA GAGG GGGG
   220135  GTCA *  6  22/24    GTCA GCCA GTCA GCCA GTCA GTCA
   221876  ACAT *  6  22/24    ACAT ACAT ACAT ACAT ATAC ACAT
   221995  ACTG *  6  23/24    ACTG ACTG ACTG ACTG ACTG AATG
   239944  AGAA *  5  18/20    AGAA AGAA AGCA AGAA ACAA
   261579  CTCG *  6  22/24    CTCG CTCG CTCG CTCG CTCT CTCT
   261773  CATA *  7  26/28    CATA CATA TCTA CATA CATA CATA CATA
   271321  TTGT *  6  22/24    TTGT TTGT TTGT TTGT TTGT TGCT
-----------------------------------------------------------------------------
 Total sequence length.........................       300994 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       23 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAC-1    ATAA-1    ATGA-1    ATGT-2    ATGG-1    AGAA-1    ACAA-1    ACAT-2    
 ACTG-1    TACA-3    TTGT-1    TGAG-1    TGTT-1    GAGG-1    GTAA-1    GTCA-1    
 GGAT-1    CATA-1    CTCG-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7293335|gb|AE003505.1|AE003505 Drosophila melanogaster genomic scaffold 142000013386053 section 22 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

     1535  AAAT *  5  18/20    AAAT AAAT AAAT AAAT TATT
     2626  TATG *  5  18/20    TATG TATG TATG TATG TACA
    16054  CAAT *  7  26/28    CAAT CAAT CAAT CAAT CTAT CAAT CAGT
    22227  AAAT *  5  18/20    AAAT AAAT AACT AAAG AAAT
    37517  ATTG *  5  18/20    ATTG ATTG ACTG ATTG ATTA
    73568  TATT *  5  18/20    TATT TATT TATT TTTT TTTT
    89958  TAAA *  5  18/20    TAAA TTAA TAAA TAAA TCAA
   130815  ATAA *  5  18/20    ATAA ATCA ATAA TTAA ATAA
   160934  AAAC *  5  18/20    AAAC AAAA AAAC AAAC AAAT
   170029  TTAT *  5  18/20    TTAT TTAT TTAT ATAT TTTT
   173223  CCCA *  5  18/20    CCCA ACCA CCCA ACCA CCCA
   205028  GCCA *  6  24/24    GCCA GCCA GCCA GCCA GCCA GCCA
   225927  GTTG *  7  26/28    GTTG GTTG GTTG GTTG GTTG GTTA GATG
   230482  GTCA *  5  19/20    GTCA GTCA GGCA GTCA GTCA
   234300  CAGT *  7  26/28    CAGT CAGT CAGT CAGT CAGT CAGC TAGT
   243344  CGAC *  6  22/24    CGAC CGAC CAAC CGAC CAAC CGAC
   243368  CAAC *  5  18/20    CAAC CGAC CAAC CGAC CAAC
   243388  CGAC *  5  18/20    CGAC CAAC CGAA CGAC CGAC
   256423  AGAT *  5  18/20    AGAT GGAT AGAA AGAT AGAT
   257494  GACT *  6  22/24    GACT GACT AACT GACT AACT GACT
   257519  ACTG *  5  18/20    ACTG ACTG ACTG AAGG ACTG
   261311  GCCT *  6  22/24    GCCT GCCT GCTT GGCT GCCT GCCT
   261370  CCCA *  5  18/20    CCCA GCCA CCCA ACCA CCCA
   263016  AGTG *  5  18/20    AGTG AGTG AGTG TGTG TGTG
   264586  TTAT *  5  18/20    TTAT TTAT TTAT TTAT TTCG
   264811  ATAC *  5  19/20    ATAC ATAC ATAC ATAT ATAC
   266132  TGGG *  5  18/20    TGGG TGTG TGGG TGTG TGGG
   289156  CCAG *  8  29/32    CCAG CCAG CCAT CCAG CCAG CCAT CCAG CCAT
   299829  ATAC *  5  18/20    ATAC ATAC ATAC ATAC GTAT
   311410  TGTA *  5  18/20    TGTA TGTA CGTA TGTA TCTA
-----------------------------------------------------------------------------
 Total sequence length.........................       314113 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       30 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-2    AAAC-1    ATAA-1    ATAC-2    ATTG-1    AGAT-1    AGTG-1    ACTG-1    
 TAAA-1    TATT-1    TATG-1    TTAT-2    TGTA-1    TGGG-1    GACT-1    GTTG-1    
 GTCA-1    GCCA-1    GCCT-1    CAAT-1    CAAC-1    CAGT-1    CGAC-2    CCAG-1    
 CCCA-2    
----------------------------------------------------------------------------


Genomic sequence...
gi|7293302|gb|AE003504.1|AE003504 Drosophila melanogaster genomic scaffold 142000013386053 section 21 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

     5782  AATA *  5  19/20    AATA AATA AATA AACA AATA
    70434  GCTG *  5  18/20    GCTG GCTG GCTG GCTG GCAT
    81667  GTTT *  5  18/20    GTTT GTTT GTTT GTTT GTCA
    89603  TACA *  9  33/36    TACA TACA TATA TACA TACA TACA TACA TATA TATA
    91007  CATA *  5  19/20    CATA CATA CATA CATA CATG
   102474  ACAT *  5  19/20    ACAT ACGT ACAT ACAT ACAT
   112874  TTCA *  5  18/20    TTCA TTCA TTTA TGCA TTCA
   130186  TACA *  5  18/20    TACA TACA TACA TATG TACA
   136030  GTTG *  5  18/20    GTTG GGTG GTTG GTTA GTTG
   186669  TACA *  5  18/20    TACA TACA TATG TACA TACA
   205857  TAAA *  5  18/20    TAAA TAAA TAAA TATA AAAA
   234923  TTGA * 10  36/40    TTGA TTGA TTGG ATGA TTGA TTGA TTGA CTGA TTGA GTGA
   278030  AATA *  5  18/20    AATA AATC AATA AATA AGTA
   281447  AAAT *  5  19/20    AAAT AAAT AAAT GAAT AAAT
-----------------------------------------------------------------------------
 Total sequence length.........................       298536 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       14 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AATA-2    ACAT-1    TAAA-1    TACA-3    TTGA-1    TTCA-1    GTTT-1    
 GTTG-1    GCTG-1    CATA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7293251|gb|AE003503.1|AE003503 Drosophila melanogaster genomic scaffold 142000013386053 section 20 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

     6670  GCTG *  7  26/28    GCTG GCTG GCTG GCTG GCTG GCTG TTTG
     7914  TTTG *  5  18/20    TTTG TTAG TTTG TTAG TTTG
    34726  GGAG *  5  18/20    GGAG AGGG GGAG GGAG GGAG
    40667  TACA *  5  18/20    TACA TATG TACA TACA TACA
    55928  TACA *  5  18/20    TACA TATA TACA TACA TATA
    67119  TTAT *  5  18/20    TTAT TTAT TTAT TTAT AAAT
    80760  CAAA *  5  18/20    CAAA CAAA CAAA CAAA AATA
    83660  TTTA *  5  18/20    TTTA TTTA TTTA TTTT TTTT
    91372  GGAT *  5  18/20    GGAT GGAT GGAT GCAC GGAT
   112702  AGTC *  5  18/20    AGTC TGTA AGTC AGTC AGTC
   115613  TTCA *  5  19/20    TTCA TTCA TTCA GTCA TTCA
   122943  ATAA *  7  27/28    ATAA ATAA ATAA GTAA ATAA ATAA ATAA
   124193  TTTG *  6  22/24    TTTG TTTG TTTG TTTG TTTG TCCG
   137141  TACA *  5  18/20    TACA TATA GACA TACA TACA
   137171  TACA *  5  18/20    TACA TACA TACA TACA TATC
   139541  CCAG *  5  18/20    CCAG CTAG CCAG CTAG CCAG
   139573  CCAA *  5  18/20    CCAA CCAA GCAA CCAA CCGA
   141361  GACC *  5  20/20    GACC GACC GACC GACC GACC
   176107  TTAT *  5  18/20    TTAT TTAT TTAT TATT TTAT
   178896  TAAA *  5  18/20    TAAA TAAA TAAA AAAA AAAA
   188871  CCAA *  8  29/32    CCAA CCAA CCAA TCAA CCAA CCAA CCAT CCAC
   290749  CAGT * 13  48/52    CAGT CAGT CAGT CAGC CAGT CAGT CAGT CAGC CAGT CAGT CAGC CAGT CAGG
   293959  CAAA *  5  18/20    CAAA CAAA CAAA CAAA CAGT
   294896  TACA *  5  18/20    TACA TACA TATG TACA TACA
   299828  ACAA *  5  18/20    ACAA TCAT ACAA ACAA ACAA
-----------------------------------------------------------------------------
 Total sequence length.........................       300310 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       25 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATAA-1    AGTC-1    ACAA-1    TAAA-1    TACA-5    TTAT-2    TTTA-1    TTTG-2    
 TTCA-1    GACC-1    GGAT-1    GGAG-1    GCTG-1    CAAA-2    CAGT-1    CCAA-2    
 CCAG-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7293211|gb|AE003502.1|AE003502 Drosophila melanogaster genomic scaffold 142000013386053 section 19 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

      636  TGTA *  5  18/20    TGTA TGTA CATA TGTA TGTA
     1309  TACA *  5  18/20    TACA TGCA TACA TACA TGCA
     1879  CATA *  5  18/20    CATA CATA CTTA CATA CGTA
     2484  TATT *  5  18/20    TATT TATT TATT TTTT TTTT
     3212  TATT *  5  18/20    TATT TATT TATT TAGT CATT
    23229  GTAT *  6  22/24    GTAT GTAC GTAT GTAT GAAT GTAT
    38826  CATA *  6  22/24    CATA CATG CATA CATA CATA CACA
    38925  CATA *  5  18/20    CATA CATA CATA CATA TATT
    46038  AACC * 12  44/48    AACC AACC AACC AACC AACC AACA AACC AACA AACC AACC AACC ATCA
    48999  GTAT *  7  26/28    GTAT GTAT GTAT GTAC ATAT GTAT GTAT
    73501  TATG *  8  30/32    TATG TACA TATG TATG TATG TATG TATG TATG
    86583  GTGC *  5  18/20    GTGC GTGC GTGC GTGT GTGT
    89759  ATGG *  6  22/24    ATGG ATGG ATGG ATAG ATGG TTGG
    91936  TATG *  8  30/32    TATG TATG TATG TATG TATG TATG TATG TACA
    93182  TATG *  5  18/20    TATG TACG TATG TATG TATA
   115354  CCAA *  6  24/24    CCAA CCAA CCAA CCAA CCAA CCAA
   118924  GAAA *  5  18/20    GAAA GAAA GAAT GAAA AAAA
   119669  ATAA *  5  19/20    ATAA CTAA ATAA ATAA ATAA
   119815  TTTG *  5  19/20    TTTG TTTG TTTG TTTT TTTG
   128304  TTGT *  5  18/20    TTGT TTGT TTGT TTGT ATCT
   133087  GTTT *  5  18/20    GTTT GTTT TTTT GTTT TTTT
   142059  TTGT *  5  19/20    TTGT TTGT TTGT TTGT TGGT
   146498  TTCT *  6  22/24    TTCT TTCT TTCT TTCT TTTT TTTT
   156120  TGTT *  5  18/20    TGTT TTTT TTTT TGTT TGTT
   166549  CGAG *  6  23/24    CGAG CTAG CGAG CGAG CGAG CGAG
   171444  TATG *  5  19/20    TATG TATG TATG TATG AATG
   171779  GTTG *  8  30/32    GTTG GTTG GTTG GTTG GTTG GTTG GTGG GTTA
   185291  AAAC *  6  22/24    AAAC AAAC CAAC AAAC GAAC AAAC
   196311  ACTG *  7  26/28    ACTG ACTG ACTG ACTG ACTG ACTG AGTT
   203185  GTAT *  6  22/24    GTAT GTAT GTAT GTAT GTAT GTTC
   215459  TTGG *  7  26/28    TTGG TTGG TTGG ATGG TTGA TTGG TTGG
   221198  AATT *  5  18/20    AATT AGTT AATT AATT AATC
   224526  CACT *  6  22/24    CACT CGCT CACT CACT CACT CACA
   226499  TACA *  5  18/20    TACA TACA TACA TACA TATG
   229945  GATA *  5  18/20    GATA GTTA GATA GATA GAGA
   233659  TATG *  6  22/24    TATG TATG TATG TATA TATG TATA
   234584  TGAC * 22  81/88    TGAC TGAC TAAC TGAC TGAC TGAC TAAC TGAC TGAC TGAC TAAC TGAC TGAC TGAC TGAC TGAC TGAC TGAC TGAC TGAC TGAC AACT
   243348  TACA *  5  18/20    TACA CACA TACA TACA AACA
   260305  TGTA *  5  18/20    TGTA TGTA TGTA TATA TATA
   275790  TGCG *  5  18/20    TGCG TGTG TGTG TGCG TGCG
   279834  TTGA * 10  36/40    TTGA TTGA TTGT TTGA TTGA TTGA TTGA TTGT TTGA TGGT
   284821  CTGG *  6  23/24    CTGG CTGG CTGG CTGG CTGG CTGC
   288479  AATA *  5  18/20    AATA AAAA AAAA AATA AATA
-----------------------------------------------------------------------------
 Total sequence length.........................       301929 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       43 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAC-1    AATA-1    AATT-1    AACC-1    ATAA-1    ATGG-1    ACTG-1    TATT-2    
 TATG-5    TACA-3    TTTG-1    TTGA-1    TTGT-2    TTGG-1    TTCT-1    TGAC-1    
 TGTA-2    TGTT-1    TGCG-1    GAAA-1    GATA-1    GTAT-3    GTTT-1    GTTG-1    
 GTGC-1    CATA-3    CACT-1    CTGG-1    CGAG-1    CCAA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7293176|gb|AE003501.1|AE003501 Drosophila melanogaster genomic scaffold 142000013386053 section 18 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

    34823  ATGT *  5  18/20    ATGT ATGT ATGT ATGC ATAT
    43822  TGTA * 10  36/40    TGTA TGTA TGTA TGTA TGTA TGTA TGCA TGTA TGTT AGTT
    54587  TGTA *  5  18/20    TGTA TATA TGTA TGTA TATA
    56891  AATA *  5  18/20    AATA AATA AATA AAAA AAAA
    62936  GCAA *  5  18/20    GCAA GCGA GCAA GCAA GAAA
    70135  TATG *  5  19/20    TATG TATG AATG TATG TATG
    76413  GTTG *  5  18/20    GTTG GCTG GTTG GTGG GTTG
    99243  CAGT *  6  22/24    CAGT CAGT CAGC CAGT CAGT CAGC
   102610  CCAG * 16  58/64    CCAG CCAG CCAG CCAG CCAG CCAG CCAG CCAG CCAA CCAT CCAT CCAT CCAG CCAG CCAA CCAT
   102715  CCAT *  5  18/20    CCAT CCAT CCAT CCAT CGGT
   106523  TATG *  5  18/20    TATG TATG TATG TATG TAAT
   111736  ACAT *  5  18/20    ACAT ACAT AAAT ACAT ACAC
   117295  GCTC *  5  18/20    GCTC GCTC GCTC TCTC TCTC
   133887  GTCT *  8  29/32    GTCT GTCT ATCT GTCT GACT GTCT GTCT GTCA
   135638  TGGG *  5  18/20    TGGG TGGG TGGG TGGT TTGG
   141643  AACC * 11  40/44    AACC GACC AACC AACC AACC AAAC AACC AACC AACC GACC GACC
   146632  GAAG *  5  18/20    GAAG GAAG GAAG GGAG GGAG
   155184  ATAA *  5  18/20    ATAA ATAA ATAT GTAA ATAA
   162220  TATG *  6  22/24    TATG TATG TATG TATG TATG TAGT
   167294  AACA *  6  22/24    AACA AACA AACA AACA AATA AACC
   183274  CTCG *  5  18/20    CTCG CTCG CTCT CCCG CTCG
   184306  TATG *  5  18/20    TATG TATG TACA TATG TATG
   209838  ATCA *  5  18/20    ATCA ATCA ATCA ATCA TACA
   219035  CCTT * 10  36/40    CCTT CCTT CCTT CCTT CCTT CCTT CCAT CCTC ACTT CCGT
   230552  CCAG *  5  18/20    CCAG CCAG CCAG GGAG CCAG
   235535  TAAT *  8  30/32    TAAT TAAT TAAT TAAT TAAT TAAT TAAA TAAA
   242346  TACA *  5  18/20    TACA TACA TACA TATG TACA
   249465  CCGT *  6  23/24    CCGT CCAT CCGT CCGT CCGT CCGT
   263483  GTTA *  5  18/20    GTTA GTTA GTTA TTTG GTTA
   276426  TATG *  5  18/20    TATG TATG TATG TACA TATG
   288410  AAAT *  5  18/20    AAAT AAAT AAAT AAAT ATAA
   289076  TACA *  5  18/20    TACA TACA TACA TACA TCAA
   292537  ATAC *  6  22/24    ATAC ATAC ATAC ATAC ACAC ATAT
-----------------------------------------------------------------------------
 Total sequence length.........................       300191 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       33 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AATA-1    AACA-1    AACC-1    ATAA-1    ATAC-1    ATGT-1    ATCA-1    
 ACAT-1    TAAT-1    TATG-5    TACA-2    TGTA-2    TGGG-1    GAAG-1    GTTA-1    
 GTTG-1    GTCT-1    GCAA-1    GCTC-1    CAGT-1    CTCG-1    CCAT-1    CCAG-2    
 CCTT-1    CCGT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7293108|gb|AE003500.1|AE003500 Drosophila melanogaster genomic scaffold 142000013386053 section 17 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

     4292  CGCA *  5  18/20    CGCA CACA CACA CGCA CGCA
    25853  ATAA *  5  18/20    ATAA ATAA ATAC ATAT ATAA
    48700  TTGT *  6  23/24    TTGT TTGT TTGT TTGT TTGT TTGG
    54114  AAAT *  5  18/20    AAAT AAAT AAAT AAAT CAAA
    78093  TATG *  8  29/32    TATG TATG TGTG TATG TATG CATG TATG TATA
    82523  ATTA *  5  18/20    ATTA ATTA ATTA CTTG ATTA
    93831  ATAA *  8  29/32    ATAA ATAA ATAA ATAA GTAA ATAA ATAT ATAT
   102416  CGCT *  5  18/20    CGCT CGCT CGGT CGCT CTCT
   105192  CATA * 10  36/40    CATA CATA CATA CATA CATA CATA CATA CATA CCCA AATC
   152094  CGAC *  5  18/20    CGAC CGAC CGAC CGAC CGCA
   154099  CAGT *  5  18/20    CAGT CAGT CAGT TAAT CAGT
   156329  ACAT *  5  19/20    ACAT ACAT ACAA ACAT ACAT
   161457  GTAT *  5  18/20    GTAT ATAT GTGT GTAT GTAT
   177212  TTTC *  6  22/24    TTTC TTGC TTTC CTTC TTTC TTTC
   184625  TATG *  7  26/28    TATG TATG TATG AATG TATG TATG TGTG
   199598  TACA *  5  18/20    TACA TAAG TACA TACA TACA
   202765  TATG *  5  18/20    TATG TACA TATG TATG TATG
   213617  ATTT *  5  20/20    ATTT ATTT ATTT ATTT ATTT
   223125  GACG *  5  19/20    GACG GACG GACG GACG GACT
   232271  TGTA *  5  19/20    TGTA TGTA TGTA TGTA TATA
   235008  GTTT *  5  18/20    GTTT GTTT GTTT GCTT ATTT
   256746  TATG *  6  22/24    TATG TATA TATG TATG TATG TATT
   260614  GGCT *  8  31/32    GGCT GGCT GGCT GACT GGCT GGCT GGCT GGCT
   263786  TGTC *  5  18/20    TGTC TGTC TGTC TCTC TGTA
-----------------------------------------------------------------------------
 Total sequence length.........................       327311 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       24 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    ATAA-2    ATTA-1    ATTT-1    ACAT-1    TATG-4    TACA-1    TTTC-1    
 TTGT-1    TGTA-1    TGTC-1    GACG-1    GTAT-1    GTTT-1    GGCT-1    CATA-1    
 CAGT-1    CGAC-1    CGCA-1    CGCT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7293065|gb|AE003499.1|AE003499 Drosophila melanogaster genomic scaffold 142000013386053 section 16 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

    24154  CCAA * 14  52/56    CCAA CCAG CCAA CCCA CCAA CCAA CCAA CCCA CCAA CCAA CCAA GCAA CCAA CCAA
    27067  AAGG *  6  23/24    AAGG AAGG AAGG AAGG AAGG AGGG
    27452  CAGT *  6  22/24    CAGT TAGT CAGT CAGT CAGT CAGG
    29086  TTAC *  5  18/20    TTAC TCAC TGAC TTAC TTAC
    33763  CCAG *  5  19/20    CCAG CCAG CCAG CCAT CCAG
    33830  CAAA *  6  22/24    CAAA CAAA CAAA CAAA CAAG CAAG
    80614  CCAC *  6  22/24    CCAC CCAC CCAT CCAC CCAC TCAC
    87977  CCAC *  5  18/20    CCAC CCAC CAAA CCAC CCAC
    91199  TCTA *  7  26/28    TCTA TCTG TCTA TCTA TCTA TCTA TCTC
    98054  TACA *  5  18/20    TACA TATA TACA TACA TATA
   108388  ATCA *  6  22/24    ATCA ATCA ATTA ACCA ATCA ATCA
   127102  TGGT *  5  18/20    TGGT TAGT TGGT TAGT TGGT
   136235  ATCA *  5  18/20    ATCA ATCA GTCA AACA ATCA
   141173  TATG * 10  36/40    TATG TATG TATG TATG TATG TATG TATG TATG CGTG TCTA
   160761  AATA *  5  19/20    AATA AATA AATA AATA ATTA
   191464  TTAT *  5  19/20    TTAT TTAT TTAT TTAT CTAT
   192041  TATT *  5  18/20    TATT TATT TGTA TATT TATT
   200791  GTGA *  5  18/20    GTGA GTGA GTGA GTGA TTGG
   203863  CCAT *  8  29/32    CCAT CCAT CCAT CCAT CCTT CCAT CCAG CCAG
   204879  GCCA *  8  29/32    GCCA GCCA GCTA GCCA TCCA GCCA GCCA TCCA
   207328  AAAC *  5  18/20    AAAC AAAA AAAA AAAC AAAC
   208922  ATAA *  5  19/20    ATAA ATAA ATAA ATAA AAAA
   214348  TACA *  5  18/20    TACA CACA TGCA TACA TACA
   214727  TCAA *  5  19/20    TCAA TCAA TCGA TCAA TCAA
   218041  TTGG *  6  23/24    TTGG TTGG TTGC TTGG TTGG TTGG
   219419  TTCA *  5  18/20    TTCA TTCA TTCA TTCT TTAA
   224698  ATGT *  5  19/20    ATGT ATGT ATGT ATTT ATGT
   225735  AACT *  5  18/20    AACT GACA AACT AACT AACT
   225760  ACTG *  5  18/20    ACTG ACTA ACTG ACAG ACTG
   225835  GACT *  6  22/24    GACT GACT GACT TACT GACT AACT
   227923  CGAT *  6  22/24    CGAT CGCC CGAT CGAT CGAT CGAT
   227947  CTAT *  6  22/24    CTAT CTAT CTAT ATAT CTAT GTAT
   234968  CCAC *  5  18/20    CCAC CCAT CCAC CCAT CCAC
   234988  CCAT *  5  18/20    CCAT CCAG CCAT CCAG CCAT
   237366  ACAG *  7  27/28    ACAG ACAG ACAG ACAG ACAG ACAG TCAG
   238098  CCAG *  5  18/20    CCAG CCAG GCAG CCAG CCAA
   247830  GTGG *  5  18/20    GTGG GTGG GTGG GTCA GTGG
   250523  TTTA *  5  18/20    TTTA TTTA TTTA TTTT TTTT
   271497  TATG *  5  18/20    TATG CATG TATA TATG TATG
   278849  ATAC *  5  18/20    ATAC ATAC ATAC GTAC ATAT
   285328  TATG *  5  19/20    TATG TATG TATA TATG TATG
-----------------------------------------------------------------------------
 Total sequence length.........................       301550 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       41 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAC-1    AATA-1    AAGG-1    AACT-1    ATAA-1    ATAC-1    ATGT-1    ATCA-2    
 ACAG-1    ACTG-1    TATT-1    TATG-3    TACA-2    TTAT-1    TTAC-1    TTTA-1    
 TTGG-1    TTCA-1    TGGT-1    TCAA-1    TCTA-1    GACT-1    GTGA-1    GTGG-1    
 GCCA-1    CAAA-1    CAGT-1    CTAT-1    CGAT-1    CCAA-1    CCAT-2    CCAG-2    
 CCAC-3    
----------------------------------------------------------------------------


Genomic sequence...
gi|7293037|gb|AE003498.1|AE003498 Drosophila melanogaster genomic scaffold 142000013386053 section 15 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

    16220  GTTG *  6  22/24    GTTG GTTG ATTG ATTG GTTG GTTG
    18490  TGCC *  5  18/20    TGCC TGCC TGCC TGCT TGCT
    32677  AGTC *  5  18/20    AGTC AATC AGTC AGTC ATTC
    35680  TATG *  5  18/20    TATG TACG TATG TATG TAAG
    36138  TTAT *  5  19/20    TTAT TTAT GTAT TTAT TTAT
    37074  CCAT * 17  63/68    CCAT CCAT ACAT CCAA CCAT CCAT CCAT CCAA CCAT CCAT CCAA CCAT CCAT CCAT CTAT CCAT CCAT
    51294  CAGG *  5  18/20    CAGG CAGG CAGG CAGG CAAA
    51402  ATTG *  9  34/36    ATTG ATTG ATTG ATTG ATTG ACTG ATTG ATTG ATGG
    51535  TTGA *  5  18/20    TTGA TTGA CTGA CTGA TTGA
    51582  TTGA *  5  19/20    TTGA CTGA TTGA TTGA TTGA
    81187  CGAA *  5  19/20    CGAA CGAA CGAA CGAA CGAT
   106002  CAAA *  5  18/20    CAAA CAAA CATA CACA CAAA
   112892  TACA *  5  19/20    TACA TACA TACA TATA TACA
   179551  CCAG *  5  19/20    CCAG CCAG CCAG CCAG CCAA
   179704  ACCA * 10  37/40    ACCA ACCA ACCA ACCA ACCA ACCA ACCG ACCG ACCG ACCA
   192191  ATAC *  6  23/24    ATAC ATAC ATAC ATAC ATAC GTAC
   213301  GGTG *  5  18/20    GGTG GTTG GGTG GTTG GGTG
   218825  ACAT *  6  23/24    ACAT ACAT ACAT ACAT ACAT GCAT
   223607  GTAT *  5  18/20    GTAT GTAC GTAT GTAT GTAC
   227772  ATAC *  5  18/20    ATAC ATAC ATAC ATAA ATAT
   265601  CGCT *  5  18/20    CGCT CGCT CTCT CGCT CGCC
   271764  TTTA *  5  18/20    TTTA TTTA TTTA TTTT TTTT
   276010  AAAT *  5  18/20    AAAT AATA AAAT AAAT AAAT
   290231  TATG *  7  26/28    TATG TATG TATG TATG TATG TATG TGTT
   309973  TTTG *  5  18/20    TTTG TTTG TTTT TTTT TTTG
   310180  TATT *  6  22/24    TATT TATT TATT TATT TATT TCAT
-----------------------------------------------------------------------------
 Total sequence length.........................       313384 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       26 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    ATAC-2    ATTG-1    AGTC-1    ACAT-1    ACCA-1    TATT-1    TATG-2    
 TACA-1    TTAT-1    TTTA-1    TTTG-1    TTGA-2    TGCC-1    GTAT-1    GTTG-1    
 GGTG-1    CAAA-1    CAGG-1    CGAA-1    CGCT-1    CCAT-1    CCAG-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7293000|gb|AE003497.1|AE003497 Drosophila melanogaster genomic scaffold 142000013386053 section 14 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

     9371  GAAC *  6  23/24    GAAC GAAC GAAC GAAC GAAG GAAC
    15076  GTCA *  5  18/20    GTCA ATCA GTCA GTCT GTCA
    15792  CCAT *  5  18/20    CCAT CCAT TTAT CCAT CCAT
    16166  GATA * 10  36/40    GATA GATC GATA GATA GATA GAAA GATA GATA GATA CGTA
    16207  ATAG *  8  30/32    ATAG ATAG ATAG ATAG ATAG ATAG ATAG CTTG
    18634  AATG *  5  18/20    AATG AATG AATG AATG ACGG
    24017  TATG *  7  27/28    TATG TATG TATG TATG TATG TATG TCTG
    28055  AAAT *  5  19/20    AAAT AAAT AAAT AAAT AAAC
    36573  CTTT *  6  24/24    CTTT CTTT CTTT CTTT CTTT CTTT
    40928  GTTG *  5  18/20    GTTG GTTG GTTG GTTG GATT
    43733  TGTA *  5  19/20    TGTA TGTA TGTA TGTG TGTA
    53063  ACCA *  9  33/36    ACCA ACCA ACCA ACCA ACCA ACCA ACCA AACG CCCA
    58078  ATAC *  5  18/20    ATAC ATAC ATAT GTAC ATAC
    69065  TATT *  5  18/20    TATT TATT TGTT AATT TATT
    79235  TATG *  5  18/20    TATG TATG TATG TATG TACC
    81267  TCAG *  6  22/24    TCAG TCAG TCAG TCAG TCAG GTAG
   145823  TAAA *  5  18/20    TAAA TAAA TAAA TTAA AAAA
   166995  GACT *  5  18/20    GACT GACT GACT GACT GAAG
   178359  TACA *  5  18/20    TACA TACA TACA TATG TACA
   183132  GAGC *  6  22/24    GAGC GAGT GAGC GAGC GAGC GAGA
   197768  GACT *  6  22/24    GACT GACT TACT GACT GACT GACA
   215586  CAAT *  5  19/20    CAAT CAAT CAAT CAAT TAAT
   215607  AACC *  6  23/24    AACC AACC AACA AACC AACC AACC
   219201  CTCA *  6  22/24    CTCA CTTA CTCA CTCA CTCA CCCA
   245174  TGTA *  5  19/20    TGTA TGTA TGTA TGTA TGTG
   254249  GTCA *  5  19/20    GTCA GTAA GTCA GTCA GTCA
   254795  TACA *  5  18/20    TACA TACA TACA TATG TACA
   282857  TACA *  5  19/20    TACA TACA TACA TACA TATA
   290881  ATAC *  5  18/20    ATAC ATAC ATAC ATAT ATAT
   292604  TGTA *  5  19/20    TGTA TGTA TATA TGTA TGTA
-----------------------------------------------------------------------------
 Total sequence length.........................       302494 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       30 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AATG-1    AACC-1    ATAG-1    ATAC-2    ACCA-1    TAAA-1    TATT-1    
 TATG-2    TACA-3    TGTA-3    TCAG-1    GAAC-1    GATA-1    GAGC-1    GACT-2    
 GTTG-1    GTCA-2    CAAT-1    CTTT-1    CTCA-1    CCAT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7292986|gb|AE003496.1|AE003496 Drosophila melanogaster genomic scaffold 142000013386053 section 13 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

    13812  GATG *  8  29/32    GATG TATA GATG GATG GATG GATG GATG GAAG
    42716  GACT *  6  22/24    GACT AACT GACT GACT GATT GACT
    44374  CCAG *  5  18/20    CCAG CCAG GCAG CGAG CCAG
    54380  TTTC *  5  18/20    TTTC ATTA TTTC TTTC TTTC
    78582  CAGT *  5  19/20    CAGT TAGT CAGT CAGT CAGT
    89491  TATG *  5  18/20    TATG TATG TATG TATG TACA
   102214  AAAT *  6  22/24    AAAT AAAT GAAT AAAT GAAT AAAT
   122570  TGTA *  5  18/20    TGTA TGGA TGTA TGTA TGTG
   131294  TATG * 10  36/40    TATG TATG TATG TATG TATG TATG TATG TATG TATC TGGA
   140999  TATG *  5  18/20    TATG TATG TATG TATG AAGG
   147003  AAAT *  5  18/20    AAAT AAAT AAAT AAAC AAGT
   162119  TTGT *  8  29/32    TTGT TTGT TTGT TTGT TTGT TTGC TTGT TTAG
   162612  GCTG *  5  19/20    GCTG GCTG CCTG GCTG GCTG
   167609  GTTT *  5  20/20    GTTT GTTT GTTT GTTT GTTT
   169907  TGGT *  5  19/20    TGGT TGGT TGGT TGGC TGGT
   189983  ATTG *  7  26/28    ATTG ATTG ATTG ATTG ATTG ATTG ACCG
   203831  CCAA *  5  18/20    CCAA CCAT CCAA CCAT CCAA
   203851  CCAT *  8  29/32    CCAT CCAC CCAA CCAT CCAT CCAT CCAT GCAT
   203920  CTGT *  5  18/20    CTGT CTGT CTTT CTAT CTGT
   219570  AACA * 12  44/48    AACA AACA AACG AACA AACA AACA AACA AACA AACA AACA GGCA AACT
   225858  ATAC * 10  36/40    ATAC ATAC ATAC ATAC ATAC GTAC ATAC ATAG ATAC TTAT
   226896  ACCA *  5  18/20    ACCA ACCA ACCA AGCA ACCG
   247015  TTTA *  5  18/20    TTTA TTTA TTTA TTTT TTTT
   268284  ACAT *  5  18/20    ACAT ACAT ACGT ACAT ACAC
   277575  GGTC *  6  22/24    GGTC GGTC GGTT GGTT GGTC GGTC
   282277  ACAT *  5  18/20    ACAT ATGT ACAT ACAT ACAT
   296256  AAAT *  5  19/20    AAAT AAAT AAAT AAAT AAAA
-----------------------------------------------------------------------------
 Total sequence length.........................       299357 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       27 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-3    AACA-1    ATAC-1    ATTG-1    ACAT-2    ACCA-1    TATG-3    TTTA-1    
 TTTC-1    TTGT-1    TGTA-1    TGGT-1    GATG-1    GACT-1    GTTT-1    GGTC-1    
 GCTG-1    CAGT-1    CTGT-1    CCAA-1    CCAT-1    CCAG-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7292953|gb|AE003495.1|AE003495 Drosophila melanogaster genomic scaffold 142000013386053 section 12 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

    26636  TTAT *  5  18/20    TTAT TTAT TTAT TTTA TTAT
    31422  CATA *  5  19/20    CATA TATA CATA CATA CATA
    34749  CATA *  5  18/20    CATA CATA CAAA CGTA CATA
    40892  TATG *  5  18/20    TATG TATG TACA TATG TATG
    45972  ATAC *  5  18/20    ATAC ATAC ATAT ATAC ACAC
    46612  TATG *  6  22/24    TATG TATG TATG TATG TACA TATG
    59857  GTGG *  5  19/20    GTGG GTGG GTGG GTGG TTGG
    86872  TTGG *  5  19/20    TTGG TTGG TTGG TTGA TTGG
   134165  GATG *  5  19/20    GATG GATG GATG GATG AATG
   140755  GTGG *  5  19/20    GTGG GTGG ATGG GTGG GTGG
   142480  CATA *  5  18/20    CATA CATA CATA CATA TGTA
   155307  GTAT *  5  18/20    GTAT GTAT GTAT GTAT GGGT
   160785  CAAA *  5  19/20    CAAA CAAA TAAA CAAA CAAA
   169628  AAAT *  5  18/20    AAAT AAAT AAAT AAAC AAAC
   170123  ACCA *  9  33/36    ACCA ACCA ACCA ACCA ACCA ACCA TCCA ACCG AACA
   184937  TATG *  6  23/24    TATG TATG TATA TATG TATG TATG
   185237  CCTT *  6  22/24    CCTT CCTT CCTT CCTT CCTG CCGT
   193487  ATAA *  5  18/20    ATAA ACAA ATAC ATAA ATAA
   193936  TATG *  5  18/20    TATG TATG TATG TATA TATA
   195703  CATA *  5  19/20    CATA CATA CATA CATA CACA
   216126  GACT *  8  30/32    GACT CACT GACT GACT GACT GACT GACT GACA
   220481  GTGG *  5  18/20    GTGG GTGG GTGG GTGG CTTG
   228001  TTTG *  5  18/20    TTTG TCAG TTTG TTTG TTTG
   230300  TGAC *  5  19/20    TGAC TAAC TGAC TGAC TGAC
   230327  CTGA *  9  33/36    CTGA CTGA CTGA CTGA CTGA ATGA ATGA CTTA CTGA
   257296  GGAT *  8  29/32    GGAT GGAT GAAC GGAT GGAT GGAT GGAT AGAT
   263497  GTAT *  8  29/32    GTAT GTAT GTAT GTAT GCAT GCAT GTAT GTAA
   275844  AAAT *  5  18/20    AAAT ATAT AAAT AAAT AAGT
-----------------------------------------------------------------------------
 Total sequence length.........................       308307 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       28 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-2    ATAA-1    ATAC-1    ACCA-1    TATG-4    TTAT-1    TTTG-1    TTGG-1    
 TGAC-1    GATG-1    GACT-1    GTAT-2    GTGG-3    GGAT-1    CAAA-1    CATA-4    
 CTGA-1    CCTT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7292942|gb|AE003494.1|AE003494 Drosophila melanogaster genomic scaffold 142000013386053 section 11 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

    10776  GACA *  6  22/24    GACA GACA GAAA GAGA GACA GACA
    27578  CATA *  6  22/24    CATA CATA GATA CGTA CATA CATA
    30719  GAGG *  6  22/24    GAGG GAGG GAGG GAGA GAGA GAGG
    35870  GTTT *  5  18/20    GTTT GTTT GTTT GTTT GCCT
    64123  TACA * 10  37/40    TACA TAAA AACA TACA TACA TACA TACA AACA TACA TACA
    64690  GTAT *  5  19/20    GTAT GTAT GTAT GTAT GTAC
    72324  GTTT *  6  23/24    GTTT GTGT GTTT GTTT GTTT GTTT
    79502  TTGA *  5  18/20    TTGA TTGA TTGA TTGA TCAA
    80639  ACAT *  5  18/20    ACAT ACAA ACAT ACAT ACGT
    88357  TGAC *  5  19/20    TGAC TGAC TGAA TGAC TGAC
    94429  TTTA *  5  19/20    TTTA TTTA TTTA TTTA TTTT
    96717  GAGG *  5  18/20    GAGG GAGA GAGG GAGA GAGG
   103375  CTGT *  6  22/24    CTGT CTGT CTGT CTGT GTGT GTGT
   105627  CATA *  5  18/20    CATA CATA CACA CATA CACA
   106654  GACA *  6  22/24    GACA GACA TACG GACA GACA GACA
   123687  TCGC *  5  18/20    TCGC TCGC TCGC TCTC TCTC
   129452  CCAA *  5  18/20    CCAA CCAA CCAA CCAC CCAT
   158629  AAAG *  5  18/20    AAAG AAAG AAAG AAAA AAAA
   159934  TAAA *  6  22/24    TAAA TAAA TAAA AAAA TAAA AAAA
   172682  TACA *  5  18/20    TACA TAAA TACG TACA TACA
   172716  ACAT *  5  19/20    ACAT ACAT ACAT ACAT AAAT
   175477  GCGA *  5  18/20    GCGA GCGA GCGA GCAA GCAA
   179545  CACC *  5  18/20    CACC CAAC CACC CAAC CACC
   181865  TTGT *  5  18/20    TTGT TTGT TTGT TTGT TGTT
   190279  TTGG *  5  18/20    TTGG TGGG TTGG TTGG TGGG
   270728  ATAC *  6  22/24    ATAC ATAT ATAC ATAT ATAC ATAC
   281289  TTAA *  5  18/20    TTAA TTAA ATAA TTAA TGAA
   283544  TCAG *  6  23/24    TCAG TCAG TCAG TCAG TCAG TCTG
-----------------------------------------------------------------------------
 Total sequence length.........................       300080 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       28 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAG-1    ATAC-1    ACAT-2    TAAA-1    TACA-2    TTAA-1    TTTA-1    TTGA-1    
 TTGT-1    TTGG-1    TGAC-1    TCAG-1    TCGC-1    GAGG-2    GACA-2    GTAT-1    
 GTTT-2    GCGA-1    CATA-2    CACC-1    CTGT-1    CCAA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7292892|gb|AE003493.1|AE003493 Drosophila melanogaster genomic scaffold 142000013386053 section 10 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

     4436  CATA *  6  22/24    CATA CATA CATA CATA CATA TGTA
    17999  ATTT *  5  18/20    ATTT ATAT TTTT ATTT ATTT
    19650  CCAC *  6  22/24    CCAC CCAA CCAC CCAC CCAC TCAC
    25040  CTTC *  9  33/36    CTTC CTTC CTTC CTTT CTTC CTTC CTTC CCTC CTCC
    43652  ATAA *  5  18/20    ATAA ATTA ATAA ACAA ATAA
    71361  CACG *  5  18/20    CACG CACG CACA CAAG CACG
    72498  TGTC *  6  22/24    TGTC TGTC TGTC TGTC TGCT TGTC
    75862  ACTA *  5  18/20    ACTA ACTA GCTA ACTA ACTT
    76315  TTTA *  5  18/20    TTTA TTAA TTTA TTAA TTTA
    79572  TATG *  5  18/20    TATG TATG TTTG TTTG TATG
    92415  TTAT *  7  26/28    TTAT TTAT TTAT TTAT TTAT TTTT TTTT
   102383  TGTT *  6  22/24    TGTT TGTT TGCT TGTT TGTT TGGT
   104645  TTGA *  5  18/20    TTGA TTGA ATGA ATGA TTGA
   104941  AGTC *  5  19/20    AGTC AGTC AGTC AGTC AGTT
   120642  GTAT *  5  18/20    GTAT ATAT GTAT GTAT ATAT
   120815  TAAT *  5  18/20    TAAT TAAA CAAT TAAT TAAT
   135979  TTAA *  5  18/20    TTAA TTTA TTAT TTAA TTAA
   172068  TATG *  5  18/20    TATG CATG TATG TATG TATA
   221501  AAAC *  5  18/20    AAAC AAAC AAAA AAAA AAAC
   224352  TATG *  6  24/24    TATG TATG TATG TATG TATG TATG
   234143  TATG *  5  18/20    TATG TGTG TATA TATG TATG
   246122  TAAA *  6  22/24    TAAA TAAG TAAA TAAA TAAA TAAG
   250006  ATGT *  5  18/20    ATGT ATGT ATGT ATGA ATGG
   261944  AGTC *  5  18/20    AGTC AGTC AGTC AGGC AATC
   262916  TATG *  5  20/20    TATG TATG TATG TATG TATG
   297091  TATG *  5  18/20    TATG TATG TATG TTTG TATA
   302430  GATA *  5  18/20    GATA GTTA GATA GATA GATT
   307840  TCAA * 10  39/40    TCAA TCAA TCAA TCAA TCAA TCAA TCAA TCAA TCAA TCAT
-----------------------------------------------------------------------------
 Total sequence length.........................       308093 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       28 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAC-1    ATAA-1    ATTT-1    ATGT-1    AGTC-2    ACTA-1    TAAA-1    TAAT-1    
 TATG-6    TTAA-1    TTAT-1    TTTA-1    TTGA-1    TGTT-1    TGTC-1    TCAA-1    
 GATA-1    GTAT-1    CATA-1    CACG-1    CTTC-1    CCAC-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7292850|gb|AE003492.1|AE003492 Drosophila melanogaster genomic scaffold 142000013386053 section 9 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

    15332  AAAT *  5  18/20    AAAT ACAT AAAT AAAT AAAG
    15637  ATTT *  5  19/20    ATTT TTTT ATTT ATTT ATTT
    45686  AAAC *  5  18/20    AAAC AAAA AAAC AAAC CAAC
    58328  TTTA *  8  29/32    TTTA TTTA TTTA TTTA TTTA TTTT TTTT TTTT
    80771  TAAA *  5  18/20    TAAA AAAA TAAA TAAA AAAA
    89237  TACA *  6  22/24    TACA TACA TACA TACA TACA TATG
    90627  GTGA *  6  22/24    GTGA GTGA GTGT GTGA GTGA GTGC
    93501  GTGG *  5  18/20    GTGG GTGG GTTG GTGG GGGG
    96519  GCTG *  5  18/20    GCTG GCTA GCTG ACTG GCTG
   100425  TTTA *  5  18/20    TTTA TTTA TTTA TTTT TTTT
   117519  TATG *  5  19/20    TATG TATG TATG TATG TATC
   127200  TTGG *  5  18/20    TTGG TTGG TTGG TTAG TTAG
   139948  AGAA *  5  18/20    AGAA AGAA AAAA AGAA AGTA
   147988  AACC *  6  22/24    AACC AACC GACC AACC GACC AACC
   148012  GACC *  5  18/20    GACC AACC GACC GACC GACG
   153107  TCGA *  5  18/20    TCGA TCGA TCGA TCGA TTGC
   189751  TTTG *  5  18/20    TTTG TTTG GTTG TTTG TGTG
   193145  TTAT *  6  22/24    TTAT TTAT TTAT TTAT TTTT TTTT
   195209  TATG *  5  18/20    TATG TATG TACG TATT TATG
   195937  TATG *  6  22/24    TATG TATG TATG TATG TATG TGGG
   203047  ATAC *  5  18/20    ATAC ATAC ATAC ATAT ATAT
   205705  ACAT *  5  20/20    ACAT ACAT ACAT ACAT ACAT
   227697  ACAT *  5  18/20    ACAT ACAT ACAT ACGT ATAT
   234239  ACAT *  6  23/24    ACAT ACAT ATAT ACAT ACAT ACAT
   240454  CAGT *  5  18/20    CAGT GAGT CAGT CAGT CATT
   242455  TGAA * 10  36/40    TGAA TGAA TGAA TGAA TGAA TGAA TGAG TGAG TGAG TGAG
   242495  TGAG * 10  36/40    TGAG TGAG TGAG TGAG TGAG TGAG CGAG TGAA CGAG TGTG
   244915  ACTC *  5  18/20    ACTC ACTC ACTC ACTG ACTG
   244941  TGAC * 18  65/72    TGAC TTAC TGAA TGAC TGAC TGAC TGAC TGAC TGAC TGAC TGAC CGAC TGAA TGAC TGAT TGAC GGAC TGAA
   277181  AACA *  6  22/24    AACA AACA AATA ATCA AACA AACA
   280884  AATG *  5  18/20    AATG GCTG AATG AATG AATG
   295301  TAAA *  6  22/24    TAAA TAAA TAAA TAAA TAAA TACG
   295772  ATAG *  5  19/20    ATAG ATAG ATAG ATAG ATAT
-----------------------------------------------------------------------------
 Total sequence length.........................       298939 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       33 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AAAC-1    AATG-1    AACA-1    AACC-1    ATAG-1    ATAC-1    ATTT-1    
 AGAA-1    ACAT-3    ACTC-1    TAAA-2    TATG-3    TACA-1    TTAT-1    TTTA-2    
 TTTG-1    TTGG-1    TGAA-1    TGAG-1    TGAC-1    TCGA-1    GACC-1    GTGA-1    
 GTGG-1    GCTG-1    CAGT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7292821|gb|AE003491.1|AE003491 Drosophila melanogaster genomic scaffold 142000013386053 section 8 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

    10274  TGTA *  5  19/20    TGTA TGTA TGTA TGTA TATA
    74185  GTGA *  5  18/20    GTGA GTGT GTGA GTGC GTGA
    83098  CATA *  5  18/20    CATA CATA AATA TATA CATA
    97587  GTTC *  5  18/20    GTTC GTTC GTTC GTTC GCTG
    99048  ACGC *  5  18/20    ACGC ACAC ACAC ACGC ACGC
    99139  TTTA *  5  18/20    TTTA ATTA TTTA TTTA TTCA
   109920  AAAC *  5  18/20    AAAC AAAC AATG AAAC AAAC
   122523  ATTA *  5  18/20    ATTA ATTA ATTA GTTT ATTA
   134621  ACCC *  5  18/20    ACCC ATAC ACCC ACCC ACCC
   137444  GGAT *  6  22/24    GGAT GGAT GAAT GGAT GAAT GGAT
   137470  ATGG *  8  29/32    ATGG ATGG ATGG ATGG ATGG TTGG CTGG TTGG
   139347  CTGT *  8  29/32    CTGT CTGT CTGT CTGT CTGT CTGT GTAT GTGT
   140084  TGGT *  8  29/32    TGGT TGGT TGGT TGGT TGAA TGGT TGGT TGGA
   149427  ACAT *  5  19/20    ACAT ACAT ACAT ACAT AAAT
   169114  TAAC *  6  22/24    TAAC TAAC TAAC CAAC TAAC TAAT
   173305  AGAT * 55 198/220   AGAT AGAT AGAT TGAT AGAT AGAT TGAT AGAT AGAC TGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAT AGAA TAGA TAGA GATA AATT GCAC
   175634  ATTT *  5  18/20    ATTT TTTT ATTG ATTT ATTT
   214655  GCCA *  5  19/20    GCCA GACA GCCA GCCA GCCA
   296785  TTAT *  5  18/20    TTAT TTAT TTTT TTAT TTTT
   305177  TATG *  6  22/24    TATG TATG TATG TATG TACA TATG
   306643  ACAT *  6  22/24    ACAT ACAT ACAT ACGT ACAT ACCT
   314420  AAAC *  5  18/20    AAAC AAAA AAAC AAAA AAAC
   320300  CCAA *  6  22/24    CCAA CCAC CCAA CCAA CCAA CCAC
   321794  TATC *  7  26/28    TATC TATC TATC TATC TATC TATG TATT
-----------------------------------------------------------------------------
 Total sequence length.........................       323489 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       24 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAC-2    ATTA-1    ATTT-1    ATGG-1    AGAT-1    ACAT-2    ACGC-1    ACCC-1    
 TAAC-1    TATG-1    TATC-1    TTAT-1    TTTA-1    TGTA-1    TGGT-1    GTTC-1    
 GTGA-1    GGAT-1    GCCA-1    CATA-1    CTGT-1    CCAA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7292788|gb|AE003490.1|AE003490 Drosophila melanogaster genomic scaffold 142000013386053 section 7 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

    15286  CCAG *  8  30/32    CCAG CTAG CCAG CCAG CCAG CCAG CCAG CCAA
    16840  TCTG *  5  18/20    TCTG TCTG TCAG TCTC TCTG
    25546  CACG *  5  18/20    CACG CACG CACA CACG CACA
    25810  CTCG *  8  30/32    CTCG CTCG TTCG CTCG CTCG CTCG CTCG CTCT
    25937  CTCG *  5  18/20    CTCG CTCG CTCG TTCG CTCT
    26827  TCTA *  5  19/20    TCTA TCTA TCTA TCTA TCTC
    52065  TATG *  5  18/20    TATG TATG TATG TATA TAAG
    52903  TTGG *  5  19/20    TTGG TTGG TTGG TTGG TTGT
    56088  CAAT *  7  26/28    CAAT TAAT CAAT CAAT CAAT CAAT CGAT
    70201  CCCA *  5  18/20    CCCA TCCA CCCA TCCA CCCA
    91972  GCGA *  5  18/20    GCGA ACCA GCGA GCGA GCGA
   100359  GTAT *  6  22/24    GTAT GTAT GTAT GTAT GTAT GTGC
   103821  GTAC *  5  18/20    GTAC GTAC GTAC GTAT GTAT
   107608  TTCT *  5  18/20    TTCT TTAT TTCT TTCT TTAT
   109559  ACAT *  5  18/20    ACAT ACAC ACAC ACAT ACAT
   110622  TATG *  5  18/20    TATG TACA TATG TATG TATG
   112496  TATG *  5  18/20    TATG TATG TACA TATG TATG
   112809  TACA *  6  22/24    TACA TACA TACA AACA AACA TACA
   117330  ATTA *  5  18/20    ATTA ATTA ATGA AATA ATTA
   117596  TTTA *  5  18/20    TTTA TTTA TTTA TATA TATA
   117886  GCGA *  5  18/20    GCGA GAGA GCGA GCGA GAGA
   130525  ATAC *  5  19/20    ATAC ATAC ATAC ATAC ATAT
   130677  TATG *  9  34/36    TATG TATG TATG TATG TATG TATG TATG TATG TAGA
   135443  ATTA *  5  18/20    ATTA ATTA ATTA ATTG ATCA
   136647  TACA *  5  18/20    TACA TACA TACA TATG TACA
   145671  ATCA *  5  18/20    ATCA ATCC ATCA ATCA AACA
   148898  GTAT *  5  18/20    GTAT GTAT GTGT GTGT GTAT
   156953  CAAC *  6  22/24    CAAC CAAC CAAC CAAC AAAG CAAC
   162020  TATG *  6  23/24    TATG TATG TATG TATG TTTG TATG
   185078  CGCA *  5  18/20    CGCA CGCA CGCA CACA CACA
   214940  ACTG *  9  34/36    ACTG AATG ACCG ACTG ACTG ACTG ACTG ACTG ACTG
   217941  CACG *  7  26/28    CACG TACG CACG CACG CACG CACG CAGG
   222622  ACTG *  8  30/32    ACTG GTTG ACTG ACTG ACTG ACTG ACTG ACTG
   222656  TGGC *  6  22/24    TGGC TGGC TTGC TTGC TGGC TGGC
   227117  ATTT *  5  18/20    ATTT ATTT ATTT ATTT AGTG
   239385  TTTA *  5  18/20    TTTA TTTA TTTA TTTG TTTT
   241537  TATG *  8  29/32    TATG TATG TATA TATG TATG TATG AATG TTTG
   244459  TTTA *  6  22/24    TTTA TTTA TTTA TTTA TTTT TTTT
   246923  TCAG * 26  95/104   TCAG TCAG TTAG TCAG TCAG TTAG TCAG TCAG TCAG TCAG TCAG TCAG TCAA TCAG TCAG TTAG TCAG TCAG TCAG TCAG TTAG TCAG TCAA TCTG TCAG TTGG
   260959  TATT *  8  29/32    TATT TATT TATT TATT TATT TATT TATT GGTC
   272602  TTTA *  5  18/20    TTTA TTTA TTTA TTTC TTTT
   282745  TTAA *  5  19/20    TTAA TTAA TTAA CTAA TTAA
   288721  ATGT *  5  19/20    ATGT ATGT ATGT ATGT TTGT
   290128  ATAC *  5  18/20    ATAC ATAC ATAC ATAC TTGC
-----------------------------------------------------------------------------
 Total sequence length.........................       302752 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       44 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATAC-2    ATTA-2    ATTT-1    ATGT-1    ATCA-1    ACAT-1    ACTG-2    TATT-1    
 TATG-6    TACA-2    TTAA-1    TTTA-4    TTGG-1    TTCT-1    TGGC-1    TCAG-1    
 TCTA-1    TCTG-1    GTAT-2    GTAC-1    GCGA-2    CAAT-1    CAAC-1    CACG-2    
 CTCG-2    CGCA-1    CCAG-1    CCCA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7292759|gb|AE003489.1|AE003489 Drosophila melanogaster genomic scaffold 142000013386053 section 6 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

    11835  TTAA *  5  18/20    TTAA TTAA TTAA TTTA TTCA
    13307  AAAC *  5  18/20    AAAC AAAC AAAC AAAA AAAA
    27361  CGCA *  5  18/20    CGCA CACA CGCA CGCA CACA
    35250  GTTG *  6  22/24    GTTG GTCG TTTG GTTG GTTG GTTG
    35538  AATG *  5  20/20    AATG AATG AATG AATG AATG
    35894  AGGA *  5  18/20    AGGA AGGA AGGA AGGA AGCT
    39212  GGCT *  6  23/24    GGCT GCCT GGCT GGCT GGCT GGCT
    76387  TTAG *  5  19/20    TTAG TTAG TTAG TTAG TTAA
    76410  TATT *  5  18/20    TATT TATT TATT TAGT TAAT
    83334  CACT *  5  18/20    CACT CACT CATT CACT CATT
    91925  CCAA *  8  30/32    CCAA TCAC CCAA CCAA CCAA CCAA CCAA CCAA
   110141  TAGA *  5  19/20    TAGA TGGA TAGA TAGA TAGA
   114984  TTAT *  5  20/20    TTAT TTAT TTAT TTAT TTAT
   122318  TTTG *  5  18/20    TTTG TTTG TTTG TTTG AGTG
   155223  ACAT *  5  19/20    ACAT ACAT ACAT ACAT ATAT
   157013  CAAC *  5  19/20    CAAC CAAC CAAC CAAC CGAC
   157621  AATG *  5  18/20    AATG AATG AATG AATG TGTG
   161000  ATTT *  5  19/20    ATTT ATTT ATTT ATTT TTTT
   161905  GATC *  5  19/20    GATC GATC GATC GATG GATC
   186979  TTTG *  5  18/20    TTTG TTTC TTTA TTTG TTTG
   195726  TTTG *  5  18/20    TTTG TTTG GTAG TTTG TTTG
   196322  TAAT *  5  18/20    TAAT TAGT TAAT TAGT TAAT
   211709  GATT *  8  30/32    GATT GATT GATT GATT GATT GATT AATC GATT
   217474  TGGA * 13  47/52    TGGA TGGG TGGA TGGA TGGA TGGG TGGA TGGA TGGA TGGA TGGA TGGG TGTG
   240381  GATG *  8  29/32    GATG GATG GATG GATG GATG GATG GATT GGAG
   253886  ACAT *  6  23/24    ACAT ACAT ACAT ACAT ACAT GCAT
   255282  TATG *  5  18/20    TATG TACA TATG TATG TATG
   295153  TCTG *  5  18/20    TCTG TCCG TCTG TCTG TGTG
   302257  ATAA *  5  18/20    ATAA ATAA GTAA ATAA ATAG
-----------------------------------------------------------------------------
 Total sequence length.........................       302915 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       29 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAC-1    AATG-2    ATAA-1    ATTT-1    AGGA-1    ACAT-2    TAAT-1    TATT-1    
 TATG-1    TAGA-1    TTAA-1    TTAT-1    TTAG-1    TTTG-3    TGGA-1    TCTG-1    
 GATT-1    GATG-1    GATC-1    GTTG-1    GGCT-1    CAAC-1    CACT-1    CGCA-1    
 CCAA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7292734|gb|AE003488.1|AE003488 Drosophila melanogaster genomic scaffold 142000013386053 section 5 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

     6303  TTTC *  6  23/24    TTTC TTTC TTTC TTTC TTTC TTTT
    10851  TACA *  5  18/20    TACA TACA TACA TATA TATA
    25751  TGTA *  5  18/20    TGTA TATA TGTA TGTA TGTG
    31879  TATT *  6  22/24    TATT TTTT TATT TATT TATT TTTT
    32097  AATA *  5  18/20    AATA AATA AATA AATC AATT
    32295  TCGG *  5  18/20    TCGG TCGG TCGG TCGC TCGT
    40317  TCCA *  6  22/24    TCCA TCCA CCCA TCCA ACCA TCCA
    65207  AAAG *  5  18/20    AAAG AATG AAAG AAAG AATG
   102078  CAAA *  8  29/32    CAAA CAAA CAGG CAAA CAAA CAAA CAAA CCAA
   129038  ATAC *  5  18/20    ATAC ATAT ATAC ATAC ATAT
   133198  GTAT *  5  18/20    GTAT GTAT GTAC ATAT GTAT
   141367  TATC *  5  18/20    TATC CATC TGTC TATC TATC
   145920  TATG *  5  18/20    TATG TATG TATA TAAG TATG
   148858  ACAT *  5  18/20    ACAT ACAT ACAT ACAC ATAT
   162635  CCAG *  8  29/32    CCAG CCAG CCAA ACAG CCAG CCAG CCAG CCAA
   164747  ATAC *  5  19/20    ATAC ATAC ATAC ATAC ATAT
   171949  TTAT *  5  18/20    TTAT TTAT ATAT TTAT ATAT
   175811  TGTA *  5  18/20    TGTA TATA TGTA TGTA TGTG
   182715  GTTA *  5  18/20    GTTA GTTA GTTA GTTA GCTT
   183693  TGGA *  7  26/28    TGGA TGGA TGGA TGGA TGGA TGGA TAGT
   188720  TTTC *  5  18/20    TTTC TTTT TTTC TTTT TTTC
   189565  TGAC *  5  18/20    TGAC TGAC TGAC AGAC AGAC
   189813  GCAG *  5  20/20    GCAG GCAG GCAG GCAG GCAG
   192387  TACA *  5  18/20    TACA TACA TACA TACG TATA
   192544  AAAG *  5  18/20    AAAG AAAG AAAG AAAA AAAA
   195635  GCAG *  6  23/24    GCAG CCAG GCAG GCAG GCAG GCAG
   198555  TTTG *  5  18/20    TTTG TTTG TTTG TTTT TTTT
   204356  GTCA *  6  22/24    GTCA GTCA GTCA GTCA GTCA GCCC
   211466  TAGA *  6  23/24    TAGA TAGA TAGA TAGA TATA TAGA
   215680  ATGG *  8  30/32    ATGG ATGG ATGG ATGG ATGG ACGA ATGG ATGG
   216064  ATTT *  5  18/20    ATTT TTTT TTTT ATTT ATTT
   223272  GTGG *  6  22/24    GTGG GTGG TTGG GTGG TTGG GTGG
   232363  CCTA *  5  19/20    CCTA CCTA CCTA ACTA CCTA
   233991  CCAC *  5  18/20    CCAC ACAC CCAC ACAC CCAC
   234679  GTCA *  5  19/20    GTCA GTCA GCCA GTCA GTCA
   235710  AGCC *  5  18/20    AGCC ACCC AGCC AGCC AGCG
   243285  AAAG *  5  18/20    AAAG ATAG AAAG AAAA AAAG
   256652  ACAT *  5  18/20    ACAT CCAT CCAT ACAT ACAT
   263115  GACG *  5  18/20    GACG GACA GACC GACG GACG
   263805  CATA *  6  22/24    CATA CATT CATA CATA CATA TATA
   278678  TCAA *  5  18/20    TCAA TCAA TCAA TCAG TCGA
   284378  TTTA *  5  18/20    TTTA TTAA TTTA TTTA TTAA
   288071  GTGG *  5  18/20    GTGG GTGG ATGG GTGG CTGG
   298999  CACT *  6  22/24    CACT CACT AACT CATT CACT CACT
   302292  GAAC *  5  18/20    GAAC GAAC GAAC GAAT GAAA
-----------------------------------------------------------------------------
 Total sequence length.........................       302797 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       45 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAG-3    AATA-1    ATAC-2    ATTT-1    ATGG-1    AGCC-1    ACAT-2    TATT-1    
 TATG-1    TATC-1    TAGA-1    TACA-2    TTAT-1    TTTA-1    TTTG-1    TTTC-2    
 TGAC-1    TGTA-2    TGGA-1    TCAA-1    TCGG-1    TCCA-1    GAAC-1    GACG-1    
 GTAT-1    GTTA-1    GTGG-2    GTCA-2    GCAG-2    CAAA-1    CATA-1    CACT-1    
 CCAG-1    CCAC-1    CCTA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7292680|gb|AE003487.1|AE003487 Drosophila melanogaster genomic scaffold 142000013386053 section 4 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

       16  GTAT *  5  19/20    GTAT GTAT GTAT GTAT GCAT
     2179  AAAT *  6  23/24    AAAT AAAT AAAT AAAT CAAT AAAT
    19206  GAGT *  5  18/20    GAGT TACT GAGT GAGT GAGT
    41206  GCTG *  5  18/20    GCTG GCTG GCTG ACTG TCTG
    43207  TTAG *  5  18/20    TTAG TTAG TTAG TTAG CCAG
    44094  TGAT *  5  18/20    TGAT TGAT TGAT TGAT TGCC
    46518  TACA *  5  18/20    TACA TGCA TACA TACA TATA
    62311  TGTA *  7  26/28    TGTA TGAA TGTA TGTA TGTA TGTA CGTA
    67410  CGAT *  5  18/20    CGAT CCGT CGAT CGAT CGAT
    79386  TATG *  5  18/20    TATG TATG TATG TATG TTTT
   112412  AAAC *  5  18/20    AAAC AAAC AAAC AAAA AAAA
   140392  TATG *  5  19/20    TATG CATG TATG TATG TATG
   168777  GCCA * 10  36/40    GCCA GCTA GCCA GCCA GCCA GCCA GCCA GGCA GCTA ACCA
   172571  ATAC *  5  18/20    ATAC ATAC ATAC AATC ATAC
   189967  GACA *  5  18/20    GACA GACA GACA GAGG GACA
   198549  GTAT *  5  18/20    GTAT GTAT ATAT GTAT ATAT
   207564  ATAC *  5  19/20    ATAC ATAC ATAC ATAC ATAT
   222366  TGAT * 13  47/52    TGAT TGGC TGAT TGAT TGAT TGAT TGAT TGAT TGAT TGAT TGAC TGTT TGTT
   226578  ATGT *  5  18/20    ATGT ATGT ATGT ATTT ATAT
   227124  TATG *  5  18/20    TATG CATG TACG TATG TATG
   234097  GATT *  5  18/20    GATT GATT GATT GATT GGTC
   234352  CTAT *  6  23/24    CTAT CTAT CTAT CTAT CTAT CTAG
   253727  TTTG *  5  19/20    TTTG TTTG TTTG TTTG TGTG
   259135  TTGG *  5  18/20    TTGG TTGG TTGG TTAG TTAG
   284000  CCAT *  5  18/20    CCAT CCAT CCAT TCAT CCCT
-----------------------------------------------------------------------------
 Total sequence length.........................       301051 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       25 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AAAC-1    ATAC-2    ATGT-1    TATG-3    TACA-1    TTAG-1    TTTG-1    
 TTGG-1    TGAT-2    TGTA-1    GATT-1    GAGT-1    GACA-1    GTAT-2    GCTG-1    
 GCCA-1    CTAT-1    CGAT-1    CCAT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7292639|gb|AE003486.1|AE003486 Drosophila melanogaster genomic scaffold 142000013386053 section 3 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

     3072  TACA *  6  22/24    TACA TACA TACA TACA TACA CATA
    11952  ACAT *  5  18/20    ACAT ACAT ATTT ACAT ACAT
    13076  ACCA *  7  27/28    ACCA ACCA ACCA ACCA ACCA ACCA ACAA
    37109  AAAC *  5  18/20    AAAC AAAC AAAC AAAC AGAA
    38606  TTAT *  6  22/24    TTAT TTAT TTAT TTAT TTAT TCTT
    58284  TACA *  5  18/20    TACA TACA TACA TATG TACA
    58886  ATAC *  5  18/20    ATAC ATAC ATAC ATAT ATGC
    75149  GTGG *  5  18/20    GTGG ATGG GTGG GTGG GTGT
   107765  TTTA *  5  18/20    TTTA TATA TTTA TTTA TTTG
   118047  TATG *  5  18/20    TATG TATG TATG TACA TATG
   119506  ATCG *  5  19/20    ATCG ATCG ATCG ATCG ATCA
   126071  TTTG *  5  18/20    TTTG TTTG TTTG TTTT TTTT
   137327  ATGA *  5  19/20    ATGA ATGA ATGA ATGA CTGA
   137360  TGAA *  5  19/20    TGAA TGAA TGAA TGAA TGAT
   166123  AAAT *  5  18/20    AAAT AAAT AAAT GAAT AAAC
   166817  TATG *  5  18/20    TATG TAAG TCTG TATG TATG
   170193  GAAT *  5  18/20    GAAT GAAT GAAT GAAT AAAA
   196243  TATG *  5  18/20    TATG TATA TAGG TATG TATG
   198338  TATG *  5  18/20    TATG TATA TAGG TATG TATG
   205470  ATAC *  5  18/20    ATAC ATAC ATAC ATAT ATAG
   224293  TTAT *  5  18/20    TTAT TTAA TTAT TTAT TTGT
   224480  AAAC *  8  30/32    AAAC AAAC AAAC AAAC AAAG CAAC AAAC AAAC
   227698  CTTT *  5  18/20    CTTT CTTT CTTT TTTT TTTT
   231664  TTAT *  5  18/20    TTAT TTTT TTTT TTAT TTAT
   232748  TATG *  5  18/20    TATG TATG TATG TATG TACA
   233133  AACT *  5  18/20    AACT AACT AACT AACT AAAC
   240723  ATGG *  6  22/24    ATGG TTGG ATAG ATGG ATGG ATGG
   248789  ATAC *  6  23/24    ATAC ATAC ATAC ATAC ATAC AAAC
   249593  AATC *  5  18/20    AATC ATTC CATC AATC AATC
   251630  TATG *  5  18/20    TATG TACT TATG TATG TATG
   255572  TATG *  5  19/20    TATG TATG TATG TATG TAAG
   258537  TATG *  5  18/20    TATG TATG TATG TATG TACA
   260307  TTTG *  6  22/24    TTTG TTTG TCTG TTTG ATTG TTTG
   275044  AGCC *  5  19/20    AGCC AGCC AGCC AGCC AACC
   276246  TTAT *  5  18/20    TTAT TTAT TGGT TTAT TTAT
   284393  TCTT *  5  18/20    TCTT TCTT TCTT TCTT TCGA
   287813  ATTT *  5  18/20    ATTT ATTT ATTT ATTC CTTT
   302329  TATG *  5  19/20    TATG TATG TATG TATG TATA
-----------------------------------------------------------------------------
 Total sequence length.........................       303648 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       38 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAT-1    AAAC-2    AATC-1    AACT-1    ATAC-3    ATTT-1    ATGA-1    ATGG-1    
 ATCG-1    AGCC-1    ACAT-1    ACCA-1    TATG-9    TACA-2    TTAT-4    TTTA-1    
 TTTG-2    TGAA-1    TCTT-1    GAAT-1    GTGG-1    CTTT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7292593|gb|AE003485.1|AE003485 Drosophila melanogaster genomic scaffold 142000013386053 section 2 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

      103  ATAG *  5  19/20    ATAG ATAC ATAG ATAG ATAG
    14093  TATG *  5  18/20    TATG TATA TATG TATA TATG
    14117  TATG *  5  18/20    TATG TATA TATG TATA TATG
    14141  TATG *  5  18/20    TATG TATA TATG TATA TATG
    14165  TATG *  5  18/20    TATG TATA TATG TATA TATG
    14189  TATG *  5  18/20    TATG TATA TATG TATA TATG
    14213  TATG *  5  18/20    TATG TATA TATG TATA TATG
    14237  TATG *  5  18/20    TATG TATA TATG TATA TATG
    14261  TATG *  5  18/20    TATG TATA TATG TATA TATG
    14285  TATG *  5  18/20    TATG TATA TATG TATA TATG
    14309  TATG *  5  18/20    TATG TATA TATG TATA TATG
    14333  TATG *  5  18/20    TATG TATA TATG TATA TATG
    14357  TATG *  5  18/20    TATG TATA TATG TATA TATG
    14381  TATG *  5  18/20    TATG TATA TATG TATA TATG
    14405  TATG *  5  18/20    TATG TATA TATG TATA TATG
    14429  TATG *  6  22/24    TATG TATA TATG TATA TATG TATG
    50758  TAAA *  5  18/20    TAAA TAAA TACA TAAA CAAA
    56263  TATC *  6  22/24    TATC TATC AATC TATC TATC TATA
    56350  TATC *  6  22/24    TATC TATC TATC TATC TATA TATA
    69362  AGAA *  5  18/20    AGAA AGGA GGAA AGAA AGAA
    78508  CCAA *  6  23/24    CCAA CCAA CCAA CCAA CCAA CGAA
    86655  TTGG *  5  18/20    TTGG ATGG TTGG ATGG TTGG
    89489  AGTA *  5  18/20    AGTA CGTA AGTA AGTA ATTA
    94335  GGTT *  5  18/20    GGTT GGTT GGTT CGGT GGTT
    95470  TCGT *  5  19/20    TCGT TCGT TCGT TCGT TCGC
   138618  GTTG *  5  18/20    GTTG GTTG GTTG GTTG GTGC
   155741  TGAG *  5  18/20    TGAG TGAG TGAG AGAG AGAG
   165483  ATGT *  5  18/20    ATGT ATGT ACAT ATGT ATGT
   169061  GGCA *  5  20/20    GGCA GGCA GGCA GGCA GGCA
   174585  GGCA * 11  40/44    GGCA GGCA GGCA GGCA GGCA GGCA GGCA GGCA GGCT GGCA TTAA
   180800  ACAG *  6  22/24    ACAG ACGG ACAG AGAG ACAG ACAG
   180825  CAGA *  5  18/20    CAGA CAGA AAGA CAGA CAGT
   191981  ATTT *  5  18/20    ATTT ATTT ATTT TTTT TTTT
   198961  AGTG *  5  18/20    AGTG AGTG CGTG AGTG TGTG
   223678  ATGT *  6  23/24    ATGT ATGT ATGT ATGT ATGT ATTT
   247303  CATA *  5  18/20    CATA CATA CATA CCTA GATA
   252157  TTGT *  5  18/20    TTGT TTGT TTGT TTGT TGTT
   252521  AAAC *  5  18/20    AAAC AAAC AAAC ACAC ACAC
   253453  AACA *  5  18/20    AACA AACA AACC AGCA AACA
   253911  TACA *  5  18/20    TACA TACA TACA TACA TAAC
   257891  TATG *  5  19/20    TATG TATG TATG TATG TATC
   285778  TAGA *  5  18/20    TAGA TATA TAGA TAGA TATA
   285920  GATA *  5  18/20    GATA AATA GATA GAAA GATA
   296900  TATG *  5  18/20    TATG TATG TATG TATG TACA
   300287  ATAA *  5  18/20    ATAA ATGA ATAA ATTA ATAA
-----------------------------------------------------------------------------
 Total sequence length.........................       302427 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       45 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAC-1    AACA-1    ATAA-1    ATAG-1    ATTT-1    ATGT-2    AGAA-1    AGTA-1    
 AGTG-1    ACAG-1    TAAA-1    TATG-17   TATC-2    TAGA-1    TACA-1    TTGT-1    
 TTGG-1    TGAG-1    TCGT-1    GATA-1    GTTG-1    GGTT-1    GGCA-2    CATA-1    
 CAGA-1    CCAA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7292554|gb|AE003484.1|AE003484 Drosophila melanogaster genomic scaffold 142000013386053 section 1 of 30, complete sequence
 Position  Repeat    Coverage  Repeat 

     2863  ATAC *  5  18/20    ATAC ATAT ATAC GTAC ATAC
     8481  ATAC *  5  18/20    ATAC ATAC ATAC ATAT GTAC
    27025  TAGG *  5  18/20    TAGG TAGG TAGG TACA TAGG
    31941  TTGT *  5  18/20    TTGT TTGT TGGT TTAT TTGT
    54687  AAAC *  5  18/20    AAAC AAAC AAAC AAAA AAAA
    57859  TATG *  7  26/28    TATG TATG TATG TATG TACA TATG TATG
    66381  CTGG *  7  26/28    CTGG CTGG CTGG CTGG CTCG CTGG CTGA
    75956  ATTT *  5  18/20    ATTT CTTT ATAT ATTT ATTT
    91758  CTAT *  5  18/20    CTAT CTAT CTAT TTAT CTAA
    95203  CCTC *  5  18/20    CCTC CCTC CATC CATC CCTC
    95223  CATC *  5  18/20    CATC TATC CATC CATC CCTC
   119316  GATA *  6  22/24    GATA GATA GATA GATA GATA GGTG
   130370  CATA *  5  18/20    CATA CATA CATA CATA TGTA
   161843  CGAA *  5  20/20    CGAA CGAA CGAA CGAA CGAA
   168091  TTCT *  6  22/24    TTCT TTCT TTCT TTCT CTCC TTCT
   185034  TGGA *  7  26/28    TGGA TGGA TGGA TGGC TGGA TGGA TGGT
   202593  CCCA *  5  18/20    CCCA GCCA CCCA GCCA CCCA
   207630  ATAC *  5  18/20    ATAC ATAC ATAC TCAC ATAC
   212267  GCTG *  6  23/24    GCTG GCTG GCTG GCTG ACTG GCTG
   223285  AATC *  5  18/20    AATC GAGC AATC AATC AATC
   226354  CGAC *  6  22/24    CGAC CGAC CAAA CGAC CGAC CGAC
   241336  ATTG *  5  18/20    ATTG AGAG ATTG ATTG ATTG
   248327  TCTG *  7  26/28    TCTG TCTG TCTG TCTG TCTG TCTG CGTG
   248547  GTCT *  6  23/24    GTCT GTCT ATCT GTCT GTCT GTCT
   262656  TATG *  5  18/20    TATG TATG TATG TACG TATT
   262958  TCTG *  6  22/24    TCTG TCTG GCTG TCTG CCTG TCTG
   266696  CATT *  5  19/20    CATT CATT CATT CGTT CATT
   267265  GTTG *  5  18/20    GTTG GTTG TTTG GTCG GTTG
   278307  CATA *  5  18/20    CATA TATA CATA CATA CGTA
   284608  TTTG *  5  19/20    TTTG TTTA TTTG TTTG TTTG
   285550  TATG *  5  18/20    TATG TACA TATG TATG TATG
   288760  TAGG *  5  18/20    TAGG TAGG TAGG TAGG TACA
   291988  TGAA *  5  18/20    TGAA TGAA CGAA TGAA TGCA
-----------------------------------------------------------------------------
 Total sequence length.........................       314087 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       33 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 AAAC-1    AATC-1    ATAC-3    ATTT-1    ATTG-1    TATG-3    TAGG-2    TTTG-1    
 TTGT-1    TTCT-1    TGAA-1    TGGA-1    TCTG-2    GATA-1    GTTG-1    GTCT-1    
 GCTG-1    CATA-2    CATT-1    CATC-1    CTAT-1    CTGG-1    CGAA-1    CGAC-1    
 CCTC-1    CCCA-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7289319|gb|AE002799.1|AE002799 Drosophila melanogaster genomic scaffold 142000013385566, complete sequence
 Position  Repeat    Coverage  Repeat 

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 Total sequence length.........................       18364 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------

Genomic sequence...
gi|7288894|gb|AE002936.1|AE002936 Drosophila melanogaster genomic scaffold 142000013385220, complete sequence
 Position  Repeat    Coverage  Repeat 

    34077  ATTT *  5  18/20    ATTT CTTT GTTT ATTT ATTT
    42758  ACAT *  5  18/20    ACAT ACAT ATAT ACAT ATAT
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 Total sequence length.........................       48123 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       2 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 ATTT-1    ACAT-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7289027|gb|AE003066.1|AE003066 Drosophila melanogaster genomic scaffold 142000013385325, complete sequence
 Position  Repeat    Coverage  Repeat 

        1  TATC * 90 326/360   TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC CATC TATC TATC CATC TATC TATC TATC TATC TTTC TATC AACC TGTT GTTT CGGG ACCT TGCT CTTG TTGA CACT CTCA
-----------------------------------------------------------------------------
 Total sequence length.........................       28380 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       1 
-----------------------------------------------------------------------------

 Frequency of Tetra-Nucleotide Repeats  
 TATC-1    
----------------------------------------------------------------------------


Genomic sequence...
gi|7288910|gb|AE003200.1|AE003200 Drosophila melanogaster genomic scaffold 142000013385226, complete sequence
 Position  Repeat    Coverage  Repeat 

-----------------------------------------------------------------------------
 Total sequence length.........................       14631 
 Minimum Tetra-Nucleotide repeat units.........       5 
 maximum mismatch allowed......................       10%
 Total number of repeats detected..............       0 
-----------------------------------------------------------------------------
 

Tetra-Nucleotide repeats in Drosophila melanogaster Chromosome-X Genomic Scaffolds
Minimum tetra-nucleotide repeating units = 5 (allowing a maximum of 10% mismatch)
Total 88 sequences searched with a total of 21946395 bp length
Total 2125 repeats covering 45453 / 49548 base pairs
Length distribution of all tetra-nucleotide repeats 
----------------------------------------------------------------------------------------------------------------------------------------------------
No. of repeat units    5     6     7     8     9    10    11    12    13    14    15    16    17    18    19    20    21    22    23    24     >=25  

total repeats       1413   399    84   110    28    40    17     5    11     2     5     2     2     2     0     1     0     1     0     0     3 
----------------------------------------------------------------------------------------------------------------------------------------------------
 Frequency distribution of different tetra-nucleotide repeat classes 
 
   54-AAAT   20-AATA   22-ATAA   27-TAAA   27-ATTT   39-TTTA   38-TTAT   20-TATT   =  247 
    8-AAAG    3-AAGA    5-AGAA    4-GAAA    8-CTTT    9-TTTC    5-TTCT    1-TCTT   =   43 
   26-AAAC   14-AACA   16-ACAA   27-CAAA   14-GTTT   36-TTTG   23-TTGT   18-TGTT   =  174 
    5-AATT    7-ATTA   10-TTAA    7-TAAT                                           =   29
   10-AATG    7-ATGA    6-TGAA    5-GAAT    3-CATT    6-ATTC    9-TTCA    3-TCAT   =   49 
    5-AATC   11-ATCA   11-TCAA    6-CAAT    4-GATT    5-ATTG   12-TTGA    7-TGAT   =   61 
    2-AAGT    1-AGTA    2-GTAA    0-TAAG    0-ACTT    1-CTTA    2-TTAC    1-TACT   =    9 
    1-AAGG    1-AGGA    2-GGAA    1-GAAG    3-CCTT    3-CTTC    2-TTCC    1-TCCT   =   14 
    2-AAGC    0-AGCA    1-GCAA    1-CAAG    1-GCTT    0-CTTG    2-TTGC    0-TGCT   =    7 
    3-AACT    4-ACTA    0-CTAA    3-TAAC    4-AGTT    5-GTTA    4-TTAG    0-TAGT   =   23 
    1-AACG    0-ACGA    4-CGAA    4-GAAC    2-CGTT    2-GTTC    0-TTCG    1-TCGT   =   14 
   12-AACC   18-ACCA   19-CCAA    9-CAAC    4-GGTT   16-GTTG   17-TTGG   13-TGGT   =  108 
    9-ATAG    4-TAGA    6-AGAT   10-GATA    8-CTAT    8-TATC    4-ATCT   11-TCTA   =   60 
   97-ATAC  105-TACA   70-ACAT   53-CATA   33-GTAT  184-TATG   41-ATGT   38-TGTA   =  621 
   16-ATGG    8-TGGA   13-GGAT   11-GATG   22-CCAT    9-CATC    9-ATCC   10-TCCA   =   98 
    0-ATGC    3-TGCA    0-GCAT    0-CATG                                           =    3
    6-ATCG    1-TCGA    5-CGAT    7-GATC                                           =   19
    3-AGAC   11-GACA   13-ACAG    7-CAGA    4-GTCT   11-TCTG   12-CTGT   14-TGTC   =   75 
    3-AGTG    7-GTGA    4-TGAG    4-GAGT    7-CACT    3-ACTC    4-CTCA    1-TCAC   =   33 
   17-AGTC   17-GTCA   12-TCAG   10-CAGT   14-GACT   19-ACTG   16-CTGA   20-TGAC   =  125 
    0-AGGT    0-GGTA    0-GTAG    2-TAGG    0-ACCT    1-CCTA    1-CTAC    0-TACC   =    4 
    2-AGGG    1-GGGA    3-GGAG    3-GAGG    2-CCCT    1-CCTC    1-CTCC    1-TCCC   =   14 
    3-AGGC    3-GGCA    3-GCAG    1-CAGG    3-GCCT    0-CCTG    0-CTGC    3-TGCC   =   16 
    2-AGCT    0-GCTA    0-CTAG    0-TAGC                                           =    2
    2-AGCG    7-GCGA    4-CGAG    6-GAGC    3-CGCT    4-GCTC    6-CTCG    6-TCGC   =   38 
    7-AGCC   15-GCCA   17-CCAG    7-CAGC    7-GGCT   12-GCTG    8-CTGG    7-TGGC   =   80 
    0-ACGT    0-CGTA    1-GTAC    0-TACG                                           =    1
   11-ACGG    7-CGGA    1-GGAC    8-GACG    4-CCGT    0-CGTC   10-GTCC    2-TCCG   =   43 
    2-ACGC    5-CGCA    0-GCAC    5-CACG    0-GCGT    1-CGTG    6-GTGC    4-TGCG   =   23 
    4-ACCG    3-CCGA    8-CGAC    5-GACC    1-CGGT    4-GGTC    0-GTCG    4-TCGG   =   29 
    7-ACCC    8-CCCA   13-CCAC    4-CACC    2-GGGT    8-GGTG   16-GTGG    4-TGGG   =   62 
    0-GGGC    0-GGCG    0-GCGG    0-CGGG    1-GCCC    0-CCCG    0-CCGC    0-CGCC   =    1 
    0-GGCC    0-GCCG    0-CCGG    0-CGGC                                           =    0
----------------------------------------------------------------------------------------------------
----------------------------------------------------------------------------------------------------
 Tetra-nucleotide repeats longer than 40 bp (repeated 10 or more times)
 
    0-AAAT    0-AATA    0-ATAA    0-TAAA    0-ATTT    0-TTTA    0-TTAT    0-TATT   =    0 
    0-AAAG    0-AAGA    0-AGAA    0-GAAA    0-CTTT    0-TTTC    0-TTCT    0-TCTT   =    0 
    0-AAAC    1-AACA    0-ACAA    1-CAAA    2-GTTT    0-TTTG    0-TTGT    0-TGTT   =    4 
    0-AATT    0-ATTA    0-TTAA    0-TAAT                                           =    0
    1-AATG    1-ATGA    1-TGAA    1-GAAT    0-CATT    0-ATTC    2-TTCA    0-TCAT   =    6 
    0-AATC    1-ATCA    1-TCAA    0-CAAT    0-GATT    0-ATTG    2-TTGA    1-TGAT   =    5 
    0-AAGT    0-AGTA    0-GTAA    0-TAAG    0-ACTT    0-CTTA    0-TTAC    0-TACT   =    0 
    0-AAGG    0-AGGA    1-GGAA    0-GAAG    1-CCTT    0-CTTC    0-TTCC    0-TCCT   =    2 
    0-AAGC    0-AGCA    0-GCAA    0-CAAG    0-GCTT    0-CTTG    0-TTGC    0-TGCT   =    0 
    0-AACT    0-ACTA    0-CTAA    1-TAAC    0-AGTT    0-GTTA    0-TTAG    0-TAGT   =    1 
    0-AACG    0-ACGA    0-CGAA    0-GAAC    0-CGTT    0-GTTC    0-TTCG    0-TCGT   =    0 
    2-AACC    1-ACCA    3-CCAA    0-CAAC    0-GGTT    0-GTTG    1-TTGG    1-TGGT   =    8 
    0-ATAG    0-TAGA    1-AGAT    2-GATA    1-CTAT    2-TATC    0-ATCT    1-TCTA   =    7 
    2-ATAC    3-TACA    4-ACAT    1-CATA    1-GTAT    5-TATG    2-ATGT    3-TGTA   =   21 
    1-ATGG    1-TGGA    0-GGAT    1-GATG    3-CCAT    2-CATC    0-ATCC    1-TCCA   =    9 
    0-ATGC    0-TGCA    0-GCAT    0-CATG                                           =    0
    0-ATCG    0-TCGA    0-CGAT    0-GATC                                           =    0
    0-AGAC    1-GACA    2-ACAG    0-CAGA    0-GTCT    0-TCTG    0-CTGT    0-TGTC   =    3 
    0-AGTG    0-GTGA    1-TGAG    0-GAGT    0-CACT    0-ACTC    1-CTCA    0-TCAC   =    2 
    1-AGTC    2-GTCA    2-TCAG    2-CAGT    1-GACT    0-ACTG    1-CTGA    5-TGAC   =   14 
    0-AGGT    0-GGTA    0-GTAG    0-TAGG    0-ACCT    0-CCTA    0-CTAC    0-TACC   =    0 
    0-AGGG    0-GGGA    0-GGAG    0-GAGG    0-CCCT    0-CCTC    0-CTCC    0-TCCC   =    0 
    0-AGGC    1-GGCA    0-GCAG    0-CAGG    1-GCCT    0-CCTG    0-CTGC    0-TGCC   =    2 
    0-AGCT    0-GCTA    0-CTAG    0-TAGC                                           =    0
    0-AGCG    0-GCGA    0-CGAG    0-GAGC    0-CGCT    1-GCTC    0-CTCG    0-TCGC   =    1 
    0-AGCC    2-GCCA    2-CCAG    0-CAGC    0-GGCT    0-GCTG    0-CTGG    0-TGGC   =    4 
    0-ACGT    0-CGTA    0-GTAC    0-TACG                                           =    0
    0-ACGG    0-CGGA    0-GGAC    0-GACG    0-CCGT    0-CGTC    2-GTCC    0-TCCG   =    2 
    0-ACGC    0-CGCA    0-GCAC    0-CACG    0-GCGT    0-CGTG    0-GTGC    0-TGCG   =    0 
    0-ACCG    0-CCGA    0-CGAC    0-GACC    0-CGGT    0-GGTC    0-GTCG    0-TCGG   =    0 
    0-ACCC    0-CCCA    0-CCAC    0-CACC    0-GGGT    0-GGTG    0-GTGG    0-TGGG   =    0 
    0-GGGC    0-GGCG    0-GCGG    0-CGGG    0-GCCC    0-CCCG    0-CCGC    0-CGCC   =    0 
    0-GGCC    0-GCCG    0-CCGG    0-CGGC                                           =    0
----------------------------------------------------------------------------------------------------
 Total repeats longer than 40 bp = 91 
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© Division of Biochemical Sciences, National Chemical Laboratory, Pune 411008, INDIA