Mono-Nucleotide Repeats in Genomic Sequences
Mono-Nucleotide Repeats in
Drosophila melanogaster Chromosome-X genomic scaffolds
Genomic Sequence:
gi|7289277|gb|AE002611.1|AE002611 Drosophila melanogaster genomic scaffold 142000013385548, complete sequence
Position Repeat-length Repeat
1826 18/20 TTTTTTTTTTTTTTTTTGCT
10426 18/20 AAAAAAAAAAAAAACAAACA
35713 18/20 TTTTTGTTTTTTTTTTTGTT
56526 21/23 TTTTTTTTTTGTTTTTTTTTTTC
79329 24/26 TTTTTTTTTTTTGTTTTTTTTTTTCT
97269 19/21 TTTTTTTTTTTTTTGTTTTGT
104305 18/20 AAAAAAAACCAAAAAAAAAA
118139 18/20 TTTTTTTTTTTGTTTTTTTA
157226 22/24 TTTTTTTTTTTTTTTTTGTTTCTT
158187 25/27 TTTTTTTTGTTTTTTTTTTTTGTTTTT
169236 19/21 CCCCCCCCCCCCCCCCACCAC
169905 19/21 AAAAAAAAAAAAACGAAAAAA
171460 20/22 AAAAAAAAAAAAAAAAAAGAAG
176064 18/20 TTTTTTTTTATTATTTTTTT
199563 23/25 AAAAAAAAAAACAAAACAAAAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 216949
Total number of repeats detected.............. 15
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 5 9 0 1
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 5 9 0 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7316095|gb|AE002620.1|AE002620 Drosophila melanogaster genomic scaffold 142000013386037, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 0
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7295611|gb|AE003572.1|AE003572 Drosophila melanogaster genomic scaffold 142000013386037 section 5 of 5, complete sequence
Position Repeat-length Repeat
3893 18/20 AAAAAAAAAAAAAAAAATAG
10232 18/20 CCCCCCCCCCCCCCCCCCAG
20250 19/21 TTTTTTTTTTGTTTTTTTTTC
26200 21/23 AAAAAAAAAAAAAAAAAAAATAG
30338 18/20 GGGGGGGGGGGGGGGGTTGG
65319 25/27 AAAAAAAAAACAAAAAAACAAAAAAAA
66613 19/21 CCCCCCCCCCCCCCCCTCCCT
71583 19/21 GGGGGAGGGGAGGGGGGGGGG
----------------------------------------------------------------------------
Total sequence length......................... 79498
Total number of repeats detected.............. 8
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 3 1 2 2
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 3 1 2 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7295580|gb|AE003571.1|AE003571 Drosophila melanogaster genomic scaffold 142000013386037 section 4 of 5, complete sequence
Position Repeat-length Repeat
14880 23/25 TTTTTTTTTTTTTTTTTTTTTTGAT
15087 20/22 TTTTTTTTTTTTGTTTTTTTTG
26008 24/26 AAAAAAAAAAAAAAAAAAAAAAAACG
27065 18/20 AAAAACAAAAAAAAAAAAAG
46189 19/21 AAAAAAAAAAAAAAAAAAATG
46879 22/24 AAAAAAAAAAAAAAATAAATAAAA
47022 18/20 AAAAAAAAAAAAAAAGAATA
57856 18/20 CCCCCCCCCCCCACCCCTCC
62948 20/22 AAAAAAAAAAAAAAAAACAAAT
64977 21/23 TTTTTTTTTTTTTCTTTCTTTTT
70176 19/21 TTTTTCGTTTTTTTTTTTTTT
74839 19/21 AAAAAAAAAAAAAAAAAATAT
79046 18/20 AAAAAAACAGAAAAAAAAAA
80470 18/20 TTTTTTTTTTTTTTTAGTTT
102565 18/20 AAAAAAAAAAAAAAAAATCA
115587 20/22 AAAAAAAAAAAAAAAAAAAATT
116349 19/21 TTTTTTTTTTTTTTTTTTAAT
122864 19/21 TTTTTTGTTTTTTTTTTTGTT
124986 24/26 TTTTTTTTTTATTATTTTTTTTTTTT
128455 19/21 TTTTTTTTTTTTTTTTTTTGG
137855 24/26 CCCCCCCCCCCCCCCCTCCCCCCTCC
139119 18/20 TTTTTTTTTTTTATTTATTT
139551 18/20 AAAAAAAAAAAAAGAAAGAA
150160 21/23 AAAAAAAAACAAAAAAAAACAAA
151273 18/20 TTTTTTTTTTTTTTTGTATT
155424 20/22 TTTTTTTCTTTTTTTTTTTGTT
163663 20/22 AAAAAAAAAAAACAACAAAAAA
171792 26/28 TTTTTTTTTTTTTTTTTTTTGATTTTTT
232628 18/20 TTTTTTTTTTTTTTGTTTTG
258397 21/23 AAAAAAAAAAAAAAAAAAAACAG
260061 26/28 AAAAAAAAAAAAAAGAAAAAAAAAAAAT
288067 19/21 TTTTTTTGTTTTTTTTTTGTT
291632 19/21 TTTTTTTTTTTTTGTTTTATT
----------------------------------------------------------------------------
Total sequence length......................... 302246
Total number of repeats detected.............. 33
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 15 16 0 2
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 15 16 0 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7295563|gb|AE003570.1|AE003570 Drosophila melanogaster genomic scaffold 142000013386037 section 3 of 5, complete sequence
Position Repeat-length Repeat
1032 21/23 TTTTTTTTTTTTTTTTTTGATTT
4618 25/27 AAAAAAAAAAACCAAAAAAAAAAAAAA
15928 18/20 AAAAATAAAAAAAAAAAAAT
26539 21/23 GGGGGGGGGGGGGGGGGGGGGAT
27987 19/21 AAAAAAAAAAAAAAAAAAACG
32929 23/25 AAAAAAAAAAAAAAAAAAAAAATAG
36208 26/28 AAAAAAAGAAGAAAAAAAAAAAAAAAAA
38149 23/25 AAAAAAAGTAAAAAAAAAAAAAAAA
47198 30/33 TTTTTTTGGTTTTTTTTTTTTTTTTTTTTGTTT
54520 20/22 AAAAAAAAAAAAAAAAGAAAAT
56971 23/25 TTTTTTTTTTTTTTTTTTTTTTTAG
57947 19/21 TTTTTTTTTTTTTGTTTTTTG
60293 26/28 AAAAAAAAAAAAATAAATAAAAAAAAAA
76384 22/24 AAAAAAAAAAAAAAAAAAACGAAA
88460 29/32 TTTTTTTTTTTTTTTTTTTTTTTTTGTTTGCT
108187 19/21 TTTTTTTTTTTTTATTTTATT
119912 18/20 AAAAAAAAAAAAAGAAAAAC
120784 21/23 TTTTTTATTTTATTTTTTTTTTT
130688 19/21 AAAAAAAAAAAAAAAACAGAA
138064 18/20 TTTTTTTTTTTGTGTTTTTT
172407 21/23 TTTTTTTTTTTTTTTTTTTGCTT
191526 22/24 TTTTTTTTTTTTTTTTTTTTTTGG
201073 18/20 AAAAAAAAAAAAAAAACAGA
212658 18/20 AAAAAAAAAAAAAAATGAAA
217062 20/22 CCCCCCCCCCCCCCCCCCCCAA
221585 19/21 AAAAAAAAATAAAAAAACAAA
232117 20/22 TTTTTTTTTTTTTTTTGGTTTT
251629 18/20 AAAAAAAAAAAAAACGAAAA
267239 18/20 AAAAAAAAAAAAACAAAATA
275265 19/21 AAAAAAAAAAATAACAAAAAA
277671 18/20 TTTTTTGTTTTTTTTTTTTC
290469 23/25 TTTTTTTTTTTTTTTTTTTTTTTGC
291004 21/23 TTTTTTGTTTTTTTTTTTTTTTC
----------------------------------------------------------------------------
Total sequence length......................... 299012
Total number of repeats detected.............. 33
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 17 12 1 1
30 to 39 0 2 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 17 14 1 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7295529|gb|AE003569.1|AE003569 Drosophila melanogaster genomic scaffold 142000013386037 section 2 of 5, complete sequence
Position Repeat-length Repeat
43734 18/20 AAAAAAAAAATAAAAAAAAT
47908 21/23 CCCCCCCCCCCCCCCCCCCCACG
109864 20/22 AAAAAAAAAAAAAAACAGAAAA
120203 23/25 AAAAAAAAAAAAAAACAAAACAAAA
122407 20/22 TTTTTTTGTTTTTTTTTTTTTG
126639 28/31 AAAAAAAAAAAAAAAAAAAAAAACCAAAAGA
127937 26/28 AAAAAAAAAAAAAAAAAAAAAAAAAAGC
136301 22/24 TTTTTTTTCTTGTTTTTTTTTTTT
141315 26/28 AAAAAAAAAAAAAAAAAATAAATAAAAA
149376 18/20 GGGGGGGGGGGGGGGCGGCG
154573 25/27 TTTTTTTATTTTATTTTTTTTTTTTTT
173930 27/30 AAAAAAAAAAAAAAAAAAAAAAAAAACGAC
175167 21/23 TTTTTTTTTTTTTTTCTTTTTCT
193314 18/20 CCCCCACCCCCCCCTCCCCC
201705 18/20 TTTTTATTTTTTTTTTTTGT
203958 23/25 GGGGGGGGGGGGGGGGAGAGGGGGG
215187 20/22 AAAAAAAAAATAAAAATAAAAA
216771 22/24 AAAAAAAAAAAAAAAAAAAAATAC
223644 18/20 AAAAAAAAATAAAAATAAAA
227941 19/21 AAAAAAAAAAAAAAAAAAATG
----------------------------------------------------------------------------
Total sequence length......................... 292406
Total number of repeats detected.............. 20
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 9 5 2 2
30 to 39 2 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 11 5 2 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7295493|gb|AE003568.1|AE003568 Drosophila melanogaster genomic scaffold 142000013386037 section 1 of 5, complete sequence
Position Repeat-length Repeat
31038 27/30 AAAAAAAAAAAAAAAAAAAAAAAAAATACC
31266 18/20 AAAAAAAAAAAATAATAAAA
72061 20/22 TTTTTTTTTTTTTTGTTGTTTT
93235 20/22 AAAAAAAAAAAAAAAAACAAAC
98850 20/22 AAAAAACAAAACAAAAAAAAAA
99720 18/20 AAAAAAAAAAAAAAAGAAAC
106925 25/27 TTTTTTTATTTTTTTTTATTTTTTTTT
112878 23/25 TTTTTTTTTTTTTATTTTTTTTTTG
113456 25/27 TTTTTTTTTTTTTTTTTTTTTTTTTGA
136732 18/20 TTTTTTTCTATTTTTTTTTT
139792 20/22 AAAAAACAAAAAAAAATAAAAA
142707 21/23 AAAAAACAAAAAAAACAAAAAAA
146158 24/26 TTTTTTTTTTTTTGTTTTTTTTTCTT
152162 19/21 AAAAAAAAAAAACAAAAAACA
217458 21/23 TTTTTTGTTTTTTTTTTTTTTTA
266136 26/28 AAAAAAAAACCAAAAAAAAAAAAAAAAA
267144 24/26 TTTTTTTTTTTTTTTTTTTGTGTTTT
272140 21/23 AAAAAAAAAAAAAAATACAAAAA
280964 21/23 TTTTTTTTTTTTTTTTTTTTGGT
281636 23/25 AAAAACAAAAAAAAAAAAAAAAAAT
284179 18/20 AAAAAAAAAAAATAAATAAA
----------------------------------------------------------------------------
Total sequence length......................... 292926
Total number of repeats detected.............. 21
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 11 9 0 0
30 to 39 1 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 12 9 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7316092|gb|AE002629.1|AE002629 Drosophila melanogaster genomic scaffold 142000013386033, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 0
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7295629|gb|AE003574.1|AE003574 Drosophila melanogaster genomic scaffold 142000013386033 section 2 of 2, complete sequence
Position Repeat-length Repeat
25795 24/26 TTTTTTTTTTTTTTTTTTTTTTTATA
35817 21/23 TTTTTTTTATTTTTTTTTGTTTT
75470 22/24 TTTTTTTTTTTTGTTTTTTTTTTG
76509 31/34 TTTTTTTTTTTTTGTTTTTTTTTTTTTTTTGTTG
89684 27/30 TTTTTTAATTTTTTTTTTTTTTTTTTTTTG
115408 18/20 TTTTTTTTATTTTTTATTTT
137620 26/28 TTTTTTTTTTTTTTTTTTTTATTTTTTA
158882 22/24 AAAAAAAAAAAAAAAAAAAACCAA
178119 18/20 AAAAACAATAAAAAAAAAAA
191623 20/22 AAAAAAAAAAAATAAAAAAAAT
229758 26/28 TTTTTTTTTTTTTTTTTTTTTTTTTGGT
239193 19/21 TTTTTTTTTTTTTTTTGTATT
245716 24/26 TTTTTTTTTTTGTTTTTTTTTTTGTT
246542 20/22 TTTTTTTTTTTTTTTTTTTGTG
----------------------------------------------------------------------------
Total sequence length......................... 274456
Total number of repeats detected.............. 14
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 3 9 0 0
30 to 39 0 2 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 3 11 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7295620|gb|AE003573.1|AE003573 Drosophila melanogaster genomic scaffold 142000013386033 section 1 of 2, complete sequence
Position Repeat-length Repeat
34998 25/27 AAAAAAAAAAAAAAAAAAAAAAAAACC
70349 21/23 AAAAAAAAAAACAAAAACAAAAA
74950 18/20 AAAAAAAAAAAAAAACAAAT
103821 25/27 TTTTTTTTTTTTTTTTTTTTTTTTGTC
111112 21/23 CCCCCCCCCCCCCCCCCCCTTCC
121638 19/21 CCCCCTCCCCCCCCCCCCCTC
123711 21/23 TTTTTGTTTTTTTTTTTTTTTTG
132498 23/25 AAAAAAAAAAAAAAAAAAAAAACAG
134834 18/20 AAAAAAAAAAACAAAACAAA
134933 19/21 TTTTTTTTTTTTTTTGGTTTT
135607 18/20 AAAAACAAAAAAAAAAACAA
152742 25/27 TTTTTTTTTTTTTTTTTTTTTTACTTT
199635 18/20 TTTTTTTTTTTTTTTTTTGC
208111 21/23 TTTTTTTTTTTTTTTTTGTTTTG
211756 23/25 TTTTTGTTTTCTTTTTTTTTTTTTT
229100 23/25 AAAAAAAAAAAAAAAACAAAAAATA
230149 20/22 AAAAAAAAAAAAATAAATAAAA
233740 23/25 AAAAAAAAAAAAAAAAAAAAACAAG
----------------------------------------------------------------------------
Total sequence length......................... 262131
Total number of repeats detected.............. 18
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 9 7 0 2
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 9 7 0 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7288912|gb|AE002813.1|AE002813 Drosophila melanogaster genomic scaffold 142000013385227, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 2620
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289135|gb|AE002822.1|AE002822 Drosophila melanogaster genomic scaffold 142000013385417, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 1638
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289301|gb|AE002567.1|AE002567 Drosophila melanogaster genomic scaffold 142000013385554, complete sequence
Position Repeat-length Repeat
20078 20/22 TTTTTTTGTTTTTTTTTGTTTT
44812 24/26 AAAAAAAAAAATAAAAAAAAAACAAA
56901 26/28 TTTTTTGGTTTTTTTTTTTTTTTTTTTT
76871 19/21 TTTTTTTTTTTTTTTTGTATT
----------------------------------------------------------------------------
Total sequence length......................... 84373
Total number of repeats detected.............. 4
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 1 3 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 1 3 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289214|gb|AE002930.1|AE002930 Drosophila melanogaster genomic scaffold 142000013385493, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 1282
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289226|gb|AE003341.1|AE003341 Drosophila melanogaster genomic scaffold 142000013385503, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 1242
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7316107|gb|AE002566.1|AE002566 Drosophila melanogaster genomic scaffold 142000013386054, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 0
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7291169|gb|AE003451.1|AE003451 Drosophila melanogaster genomic scaffold 142000013386054 section 35 of 35, complete sequence
Position Repeat-length Repeat
806 25/27 TTTTTTTTTTGTTTTTTTTTTTTTTTG
2860 21/23 TTTTTTTTTTTGATTTTTTTTTT
11625 19/21 TTTTTTTTTTTCTTTTTTTTC
12406 27/30 TTTTTTTTTTTTTTTTTTTTTTTTAATTTG
13193 25/27 AAAAAAAAAAAAAAAAAAAAAAAACCA
13403 25/27 AAAAAAAAAAAAAAAAAAAAAAAACCA
17274 23/25 TTTTTGTTTTTTTTTTTTTTTTTAT
22181 18/20 TTTTTTTTTTTGGTTTTTTT
22890 20/22 AAAAAACCAAAAAAAAAAAAAA
22914 19/21 AAAAAATAAAAAAAAAAAAAG
26469 28/31 AAAAAAAAAAAAAAAAAAAAAAAAAAACCAC
32141 20/22 AAAAATTAAAAAAAAAAAAAAA
64507 18/20 AAAAAAAAAAAACAAAAACA
92885 21/23 TTTTTTCTTTTTTTTTTTTTTTG
96419 19/21 AAAAAAAAAAGAAAAACAAAA
118257 23/25 AAAAAAAAAAAAAACAAAAACAAAA
121041 22/24 AAAAAACCAAAAAAAAAAAAAAAA
121742 18/20 AAAAAAAAAAAAAAAAAACT
122332 19/21 AAAAAAAAAAAAAAAGAAAGA
123634 23/25 AAAAAAAAAAAAAAAAAAATGAAAA
127313 18/20 AAAAAAAAAGAAAGAAAAAA
141163 23/25 TTTTTATTATTTTTTTTTTTTTTTT
142940 25/27 TTTTTGTTTTTTGTTTTTTTTTTTTTT
146614 20/22 TTTTTTTTTTTTTTTGTTTTTG
157433 21/23 AAAAAACCAAAAAAAAAAAAAAA
166150 22/24 AAAAAAAAAAAAAAAAGAAAGAAA
167876 21/23 AAAAAAACAAAAAAAAAAAAAAG
175738 19/21 TTTTTCGTTTTTTTTTTTTTT
201997 26/28 AAAAAAAAAAAAAAAAAAAATAAATAAA
202694 19/21 AAAAATAAAAAAAAAGAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 220623
Total number of repeats detected.............. 30
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 18 10 0 0
30 to 39 1 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 19 11 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7291133|gb|AE003450.1|AE003450 Drosophila melanogaster genomic scaffold 142000013386054 section 34 of 35, complete sequence
Position Repeat-length Repeat
8205 18/20 GGGGGGGGGGGGGGGGGGCT
14529 23/25 AAAAAAAAAAAAAAAAACAAAAACA
17650 19/21 AAAAAAAAAAAAAAAAACAAT
43463 22/24 TTTTTTTTTTGTTTGTTTTTTTTT
46707 18/20 AAAAAAAAAAAAAGAAGAAA
50208 24/26 TTTTTTTTTTTGTTCTTTTTTTTTTT
52912 21/23 TTTTTTTCTTTTTCTTTTTTTTT
54073 19/21 TTTTTTTGTTTTTTTTTTTTG
57163 19/21 TTTTTTTTTTTTTTTTCATTT
58205 19/21 AAAAAAACAAAAAAAAAACAA
60586 24/26 AAAAAAAAAAAAAAAAAAAAAATAAC
65815 21/23 AAAAAAAGCAAAAAAAAAAAAAA
66885 24/26 AAAAAAAAAAAAAAAAAAAAAAAGGA
68522 22/24 AAAAAAAAAAATAAACAAAAAAAA
69654 42/46 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAGT
70615 27/30 TTTTTTCTATTTTTTTTTTTTTTTTTTTTC
73266 18/20 TTTTTTTTTTCTTCTTTTTT
87116 20/22 AAAAAAAAAAAAAAACAAAAAG
87266 19/21 TTTTTTTTTTTTTTTTTTGTG
89892 18/20 TTTTTTTTTTTTTTTTTTAA
91340 24/26 AAAAAACAAAAAAAAAAAAAAAAAGA
91982 23/25 AAAAAAAAAAAAAAAAAAAAAACCA
92251 21/23 AAAAAAAAAAAAAGAAAGAAAAA
92287 19/21 AAAAAAAAAAGAAAACAAAAA
99607 22/24 TTTTTTTTATTTTTTTTTTTATTT
101296 18/20 TTTTTTTTGTTTTTTTTTTG
101996 19/21 TTTTTTTTTTTGTTTTTATTT
136387 20/22 AAAAAAAAAACAAAAAAAAGAA
141598 21/23 AAAAAAAAAAAAAGAAAATAAAA
146277 18/20 AAAAAAAAAAAAAAAAAATG
150391 21/23 AAAAAAAAAAGAAATAAAAAAAA
153592 18/20 AAAAATAAAAAAAATAAAAA
161217 24/26 AAAAAAAAAAAAAAAAAAAAAAAAGG
177265 22/24 AAAAACAAAAAAAAAAAAACAAAA
186509 29/32 TTTTTTTTTTTTTTTTTTTTTTTGTTTTGTTC
194410 25/27 AAAAAAAAAACAAAAAAAAAAAAAAAC
194662 18/20 AAAAACAAAAAAAAAAATAA
207394 19/21 AAAAAAAAAAAAAACAAAATA
207702 20/22 TTTTTTTTTTTTTTTCTTCTTT
210763 18/20 AAAAAAAACAAAAAAAAAAT
212194 18/20 TTTTTTTTTGGTTTTTTTTT
273513 26/28 AAAAAAAAAAATAAAAATAAAAAAAAAA
275119 19/21 TTTTTTTTTTTTTTTTTTTGG
279712 20/22 TTTTTTTTTTTTTTTTTGTTCT
282693 19/21 CCCCCCCCCCCCCCCCCCATC
290600 18/20 AAAAAAAAAGAAAAAATAAA
299750 24/26 AAAAAAAAAAAAAAAAAAAAAAACAG
300575 18/20 TTTTTTTTTTTTTTTTTGGT
----------------------------------------------------------------------------
Total sequence length......................... 300732
Total number of repeats detected.............. 48
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 27 16 1 1
30 to 39 0 2 0 0
40 to 49 0 1 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 27 19 1 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7291099|gb|AE003449.1|AE003449 Drosophila melanogaster genomic scaffold 142000013386054 section 33 of 35, complete sequence
Position Repeat-length Repeat
10753 19/21 TTTTTTGTCTTTTTTTTTTTT
10911 22/24 AAAAAAAAAAGAAAAACAAAAAAA
11983 18/20 TTTTTTTTTTTGTTTTTTTG
26977 23/25 TTTTTTTTTTTTTTTTTTTGTGTTT
27232 19/21 TTTTTTCTTTCTTTTTTTTTT
29236 19/21 TTTTTTTTGTTTTTTTTTTTA
40329 18/20 AAAAAAAAAAAAAAACTAAA
42906 26/28 AAAAAAAAAAAAAAAAAAGAAAAAAACA
43530 22/24 TTTTTTTTCTTTTTTTGTTTTTTT
50901 18/20 TTTTTTTTTTTTTTTTTGCT
69150 26/28 TTTTTTTTTTTTTTTTGTTTGTTTTTTT
69923 21/23 AAAAAGAAAAAAAAGAAAAAAAA
71241 30/33 TTTTTTTTTTTTTTTTTTTTTTGTTATTTTTGT
75245 19/21 AAAAAGAAAAGAAAAAAAAAA
79627 20/22 TTTTTTTTTATTTTTTTTTTTG
80361 20/22 TTTTTTTTATTTTTCTTTTTTT
81647 24/26 AAAAAAAAAAAAAAAAACAAAAAATA
98294 22/24 TTTTTTTTTTTTTTTGTTTTTTGT
102518 22/24 AAAAAAAAAAAACAAAAACAAAAA
104898 20/22 TTTTTTTTTTTTTTTTTTGGTT
106242 19/21 AAAAAAAAAAAAAAAAAACAT
109324 22/24 TTTTTTTTTTTTTTTTTTTTTGGT
112246 23/25 TTTTTTCTTCTTTTTTTTTTTTTTT
115119 18/20 AAAAAAAAAACAAAGAAAAA
121511 21/23 TTTTTTTTTTTTTTTTTTGTATT
127835 21/23 TTTTTTGTTTTTTTTTTTTTTTA
129178 23/25 TTTTTTTTTTTTTTTAATTTTTTTT
146975 19/21 TTTTTTTTATTTTTTTATTTT
158460 18/20 TTTTTTTTTTTTTGTTTTTC
179961 19/21 TTTTTTTTTTCGTTTTTTTTT
185720 20/22 TTTTTTTTTTTTTTTTTTTTCG
186957 22/24 TTTTTTTTTTATTTTATTTTTTTT
188258 19/21 TTTTTTTTTTTTTTTTGTTTG
196892 20/22 TTTTTTTTTTTTTTTTTATTTA
202048 26/28 AAAAAAAAAAAAAAAAAAAAAAAAACCA
209543 21/23 TTTTTGTGTTTTTTTTTTTTTTT
212836 19/21 TTTTTTTTTTTTTTTTGTTTA
213140 18/20 TTTTTTTTTGTTTTTTTGTT
220798 18/20 AAAAAATAAAAAAAAAAAAC
222166 20/22 AAAAACAAAAAACAAAAAAAAA
235913 18/20 TTTTTTTTTTTTTTTTTTGC
245897 25/27 AAAAAAAAAAAAAAAACAAAAATAAAA
251125 18/20 CCCCCACCCCCCCCCCTCCC
257278 20/22 TTTTTTTTTTTTATTTTTTTTG
265031 19/21 TTTTTTTTTCTTTTTTTTTTC
286621 19/21 TTTTTTTTTTTTTTTGTTTGT
292837 23/25 TTTTTTTTTTGTTTTGTTTTTTTTT
295140 18/20 AAAAAATACAAAAAAAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 299786
Total number of repeats detected.............. 48
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 14 32 0 1
30 to 39 0 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 14 33 0 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7291077|gb|AE003448.1|AE003448 Drosophila melanogaster genomic scaffold 142000013386054 section 32 of 35, complete sequence
Position Repeat-length Repeat
22913 20/22 AAAAAAAAAATAAAAAAAAAAC
68378 23/25 TTTTTTTTTTTTTAATTTTTTTTTT
68617 21/23 TTTTTTTTTTTTTTTTTTTTTGC
69824 22/24 AAAAAAAAAAAAAAAAAAACCAAA
75499 19/21 AAAAAAATAAAAATAAAAAAA
75640 18/20 AAAAAAAAAAAATAACAAAA
77705 19/21 TTTTTTCTTTTTTTTTTTTTG
77873 21/23 TTTTTTTTTTCTTTCTTTTTTTT
78728 20/22 TTTTTTCCTTTTTTTTTTTTTT
80374 19/21 TTTTTTTTTTGTTTTTTTTTC
80542 20/22 TTTTTTTTGTGTTTTTTTTTTT
80742 18/20 AAAAAAAAAAAAAAGACAAA
82413 19/21 AAAAAGAAAAAGAAAAAAAAA
85926 18/20 CCCCCCCCCCCCCCTCCACC
91522 18/20 AAAAAAAATAAAAAAAAAAT
93478 21/23 TTTTTTTGTTGTTTTTTTTTTTT
95738 18/20 TTTTTTTTTTTCTTTTTTTC
97897 22/24 TTTTTTTTTTTTTGTTTTTTTTTG
103193 18/20 AAAAAAAAAGAAAAAAAATA
106807 20/22 TTTTTATTATTTTTTTTTTTTT
109285 21/23 AAAAAAAAAAAAAAATAATAAAA
112325 20/22 TTTTTCTTTTTATTTTTTTTTT
117094 20/22 TTTTTTTTTTTGTATTTTTTTT
117269 22/24 AAAAAAAAAAAAAAAAAAATAATA
117663 21/23 AAAAACAAAAAAAAAAAATAAAA
120080 18/20 TTTTTTTTTTTTTTTTGATT
122192 22/24 AAAAAAAAAACCAAAAAAAAAAAA
126830 18/20 AAAAAAAAAAAAAAAAGGAA
127094 26/28 TTTTTTTTTTTTTTTTTTTTTTTCGTTT
127362 19/21 TTTTTTTTTTTTATTATTTTT
131646 20/22 AAAAAAAAAGAAATAAAAAAAA
132459 19/21 AAAAAAAAAAACTAAAAAAAA
136862 19/21 AAAAAGTAAAAAAAAAAAAAA
138427 21/23 TTTTTTTTTCTTTTTTTTTTTGT
148530 24/26 AAAAAAAAAAAAAAAGAAAAGAAAAA
153909 22/24 TTTTTTTTTTTTTTTTTTTTATTA
168683 19/21 TTTTTTTCTTGTTTTTTTTTT
174187 18/20 AAAAAAAAAAAAAAACAACA
176107 21/23 CCCCCCCCCCCTCCCCCCTCCCC
179682 22/24 TTTTTTTTTTTTTTTTTGTATTTT
182485 20/22 AAAAAACAAAAAACAAAAAAAA
188462 20/22 AAAAAATACAAAAAAAAAAAAA
194678 21/23 AAAAAAAAAAGAGAAAAAAAAAA
213581 25/27 TTTTTTTTTTTTTTTTTTTTTTGCTTT
219775 19/21 AAAAAAAAAAAAAACCAAAAA
219931 19/21 AAAAAAAAAAAAACAAACAAA
223556 18/20 TTTTTTTTTTTTTTTTGTTG
235259 25/27 AAAAAAAAAAAAAAAAAAAAAACAAAT
247994 18/20 TTTTTTTTTTTTTTCTTTGT
253272 22/24 AAAAACAAAAAAAAAAAAAAAGAA
254529 19/21 AAAAAAAAAAAAAAAAAAGCA
260665 18/20 AAAAAAAAAAAAAATATAAA
265090 18/20 TTTTTTTTTTTTTTTTGTTA
279628 21/23 CCCCCCCCCCCCCCCCCCCCACA
299006 19/21 AAAAAAAAAAAAAGAAAAGAA
303905 23/25 AAAAAAAAAAAAAAAAAAACAAGAA
307149 19/21 TTTTTTTTTTATTTTTTTATT
----------------------------------------------------------------------------
Total sequence length......................... 310399
Total number of repeats detected.............. 57
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 29 25 0 3
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 29 25 0 3
----------------------------------------------------------------------------
Genomic Sequence:
gi|7291054|gb|AE003447.1|AE003447 Drosophila melanogaster genomic scaffold 142000013386054 section 31 of 35, complete sequence
Position Repeat-length Repeat
10568 18/20 TTTTTTTTTTTTTTTTTAAT
10706 22/24 AAAAAAAAAAAGAAAAAGAAAAAA
13332 21/23 AAAAAAAAAAAAAAAAACTAAAA
14847 18/20 AAAAAAAAAAAAAAAAAGAG
16557 24/26 AAAAAAAAAAAAAGAAAAAAAAATAA
17902 23/25 AAAAAAAAAAAAAAAAAAAAACAAG
18749 18/20 GGGGGGGGGGGGGGGGGGTC
23625 23/25 AAAAAAAAAAAAAAAATAAAAAAAC
24414 18/20 TTTTTTTTTTTTTGTTTTTA
42906 21/23 TTTTTTATTTTTTTTTTTTATTT
49583 18/20 TTTTTTTTTTGTTTTTTTCT
54008 23/25 AAAAAAACAAAAAAAAAAAAATAAA
59653 22/24 AAAAAAAAAAAAAAATAAAAAGAA
67550 21/23 AAAAAAAAAAAGAAAAAAAAGAA
70433 18/20 TTTTTTTTTTTTTTGCTTTT
72430 18/20 TTTTTTTTTTTTTTTCCTTT
72854 30/33 AAAAAAAAAAAAAAAAAATAAAAAAAAAATGAA
78095 28/31 AAAAACAAAAAAAAAAAAAAAACAAAAAAAC
79404 20/22 TTTTTTTTTTTTTTCATTTTTT
83072 21/23 TTTTTTCTTTTTTTTTTTTTTTG
86934 23/25 TTTTTTTTTTTTTTTTTTTTGTTCT
89104 20/22 AAAAAAAAAAAAAAAAATGAAA
99692 19/21 AAAAAAAAAAAAAAAAACATA
108877 18/20 TTTTTTTTTTTTTTTTGTTG
114269 18/20 AAAAAAAAAAAAAAAAAATG
116202 22/24 TTTTTTTTTTTTTTTTTTTCTTGT
120521 20/22 AAAAAAAAAAAAAAAAAAACAC
122715 21/23 AAAAAAAAAAAAATGAAAAAAAA
124034 18/20 AAAAAAAAAAAACAAGAAAA
129162 19/21 GGGGGGGGGGGGGGGGGCGGT
134889 19/21 GGGGGGGGGGGGGGGGTGGGT
138226 18/20 TTTTTTTTTTTTTTTTTTGG
139474 22/24 AAAAACCAAAAAAAAAAAAAAAAA
140645 21/23 AAAAAAAAAAAAAAAAAAGAATA
141106 25/27 AAAAAAAAAAAAAAAAAAAAAAAAAGC
141917 22/24 TTTTTCTTTTATTTTTTTTTTTTT
143862 23/25 TTTTTTTTTTCTTTTTTTTTTCTTT
144950 19/21 TTTTTTTTTTTTCTTTTTTTA
147041 21/23 AAAAAAAAATAAAATAAAAAAAA
147598 26/28 TTTTTTTTTATTTATTTTTTTTTTTTTT
147801 19/21 AAAAAAAAAAAAAAACAGAAA
148392 18/20 GGGGGGGGGGGGGAAGGGGG
148646 19/21 TTTTTTTTTTTTGTGTTTTTT
149702 29/32 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGG
152711 18/20 GGGGGGGGGGGGGGGGGGAC
156228 24/26 TTTTTTTTTTTTTATTCTTTTTTTTT
164079 19/21 TTTTTTTTTTTTTTTTTCGTT
165936 20/22 CCCCCCCCCCCCCCCCCCCACG
171344 22/24 TTTTTTTTTTTTTTTTTTTTTTGA
171865 20/22 TTTTTTTTTCTTTTTTTTGTTT
174550 28/31 AAAAAAAAAAAAAAAAAAAAAAAAAAATACT
176336 24/26 TTTTTTTTTTTTTTTTTTTTTTGTTG
177600 18/20 GGGGGGGGGGGGGGGCGTGG
181772 18/20 AAAAAAAAAAGAAAGAAAAA
184407 20/22 TTTTTTTTTTTTTTTTTTTGCT
195750 22/24 AAAAAAAAAACAAAAAACAAAAAA
204810 23/25 AAAAATAAAAAAAAAAAAAAAAAAT
206916 19/21 AAAAAATAAAAAAAAAAAGAA
212768 21/23 TTTTTTTTTTTTTTTTTTTTGAT
215752 18/20 AAAAACCAAAAAAAAAAAAA
265088 20/22 AAAAAAAAAAACAAAAAAAGAA
284414 20/22 AAAAAAAAAAGAAGAAAAAAAA
293945 19/21 AAAAAAAAAAACAAAACAAAA
300476 18/20 AAAAAAAAAAAAAAACATAA
----------------------------------------------------------------------------
Total sequence length......................... 304060
Total number of repeats detected.............. 64
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 29 24 6 1
30 to 39 3 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 32 25 6 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290992|gb|AE003446.1|AE003446 Drosophila melanogaster genomic scaffold 142000013386054 section 30 of 35, complete sequence
Position Repeat-length Repeat
448 20/22 AAAAAAAAAAAACAAAAAAAAC
3026 21/23 AAAAAAAAAAAAAAAGAAAAAAC
3294 20/22 TTTTTTTTTCTGTTTTTTTTTT
7876 18/20 TTTTTTTTTTTTTTTTTTAA
12857 20/22 AAAAAAACCAAAAAAAAAAAAA
29238 19/21 AAAAAAAAAATAAAACAAAAA
32364 22/24 TTTTTTTTTTTTTTTTTTTTCATT
32598 18/20 TTTTTTGTGTTTTTTTTTTT
34471 22/24 TTTTTTTTTTTTTTTTTGTTTTTC
38648 24/26 AAAAAAAAAAAAAAAAAAAAAAACAG
42302 21/23 AAAAAAAAAAAAAAAAACAAACA
43181 20/22 AAAAAAAAAAGAAAAAAATAAA
43771 19/21 AAAAAAAAATAAAAAAATAAA
44291 19/21 AAAAAAAAAAAAATTAAAAAA
44453 21/23 TTTTTTTTTTTTTTTTTTTTGGT
46228 21/23 AAAAAAACAAAAAAAAAAAAACA
63847 19/21 AAAAAAAAAAAAAGAAACAAA
64502 18/20 TTTTTTCTTTTTTTTTTTGT
66546 23/25 TTTTTTGTTTTGTTTTTTTTTTTTT
90281 19/21 AAAAAAGTAAAAAAAAAAAAA
90943 22/24 AAAAAAAAAATAAAAAAAAAAATA
91102 24/26 TTTTTTTCTTTTTTTTTTTTTTTTTG
92432 18/20 TTTTTTTTTTTTTGTTTTTG
108101 22/24 AAAAAAATAAAAAAAAAAAAAGAA
115217 18/20 TTTTTATTATTTTTTTTTTT
120047 22/24 TTTTTTATTTTCTTTTTTTTTTTT
136787 27/30 TTTTTTTCGTTTTTTTTTTTTTTTTTTTTA
139506 19/21 AAAAAAAAAAAAAAAACGAAA
144861 20/22 AAAAAAAAAAAACAAAACAAAA
145141 20/22 AAAAAAAAAAAAAAACTAAAAA
146472 21/23 TTTTTTTTTTGTTTTTTTTTTGT
147259 19/21 AAAAAAAAAAAAGAAGAAAAA
153627 20/22 AAAAAAAAAAAACGAAAAAAAA
155964 23/25 AAAAAAAAAAAAACAAAAAACAAAA
156676 23/25 AAAAAAAAAAAAAAACAAAAACAAA
158690 18/20 TTTTTTTTTTTTTTTATATT
179700 18/20 AAAAAATAAAAAAAAATAAA
181920 18/20 AAAAAAAAAACAGAAAAAAA
185013 20/22 TTTTTTGTTTTTTTTTTTTTTA
217807 18/20 AAAAAAAAAAAAAAAAAGTA
255025 18/20 TTTTTTTTTTTTTTCTTATT
257360 20/22 AAAAAAATAAAAAAAAAAATAA
258253 24/26 AAAAAAAAACAAAAAAAAAAAAGAAA
260762 19/21 AAAAAAAAAAACAAAAAAAAG
267483 18/20 AAAAAAATAAAAAAAAAAAG
274660 21/23 AAAAAAAAAAAAAGAAAAAAAAG
292270 20/22 AAAAAAAAAAAAAAAAAACAAT
292708 22/24 AAAAAAATAAAATAAAAAAAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 303104
Total number of repeats detected.............. 48
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 31 16 0 0
30 to 39 0 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 31 17 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290970|gb|AE003445.1|AE003445 Drosophila melanogaster genomic scaffold 142000013386054 section 29 of 35, complete sequence
Position Repeat-length Repeat
5230 21/23 TTTTTTTTTTTTCTTTTTTGTTT
7843 20/22 AAAAAAAAAAAAAGAAAAAATA
12207 21/23 TTTTTTTTTGTTTTTTTTTTTTG
23888 19/21 AAAAAAAAAAAAAAAAAAGGA
24067 20/22 AAAAAAAAAAAAAAAGAAAAAT
40151 19/21 TTTTTTCTTTTCTTTTTTTTT
40657 18/20 TTTTTTTTTTTGTGTTTTTT
42528 20/22 TTTTTTTTTTTCATTTTTTTTT
43114 18/20 TTTTTTTTTTTTTCATTTTT
44285 19/21 AAAAAAAAAAAAAAAATATAA
46750 19/21 TTTTTTTTTTTTTTTTTGTTC
49519 20/22 AAAAAAAAAAAAAAAAAAAACT
52938 20/22 TTTTTTTTTTTTTTTCTTTCTT
53583 19/21 AAAAAAAAAAAAAAAGAAACA
58822 20/22 AAAAAACCAAAAAAAAAAAAAA
60451 19/21 TTTTTTTTTTTTTGGTTTTTT
61169 21/23 TTTTTTGTTGTTTTTTTTTTTTT
62435 24/26 AAAAAAAAGCAAAAAAAAAAAAAAAA
65945 25/27 AAAAACAAAAAAAAAATAAAAAAAAAA
67823 21/23 TTTTTTTGTTTTTTTTTTTTTGT
67979 19/21 AAAAACAAAAAAAAAAAAAGA
68347 22/24 TTTTTTGTTTTTTTTTTTTTTTGT
71635 24/26 AAAAAAAAAAAAAAAAAATTAAAAAA
73417 39/43 TTTTTTTTTTATTTTTTTTTTTTTTTTTTTTGTTTTATTTTAT
75697 19/21 AAAAAAAAAAACAAGAAAAAA
76386 21/23 TTTTTTTATTATTTTTTTTTTTT
76623 20/22 AAAAAAAAAAAAAAGAAATAAA
77281 23/25 AAAAAAAAAAAAAAAAAACAATAAA
78417 19/21 TTTTTTTTTCTTTCTTTTTTT
83727 19/21 AAAAAAAAAAAAAAATAATAA
86595 23/25 TTTTTTTTTTTTTTTTTTTTTTTGG
92017 18/20 AAAAACAAAAAAAAAAAAGA
92780 20/22 TTTTTTTTTTTTGCTTTTTTTT
95067 21/23 AAAAAAAAAAAAAAAAAAAAATG
96858 20/22 GGGGGGTGGGGGGGGGGGGGGT
108847 19/21 AAAAAAAAAAAAACAAAAAAG
109352 20/22 AAAAAAAAAAAAAAAACCAAAA
109594 18/20 TTTTTTTTTTTTTTTGTTTC
111453 21/23 AAAAAAAAAAACAAAATAAAAAA
116199 20/22 TTTTTTCTTTTTTTTTTTATTT
118734 21/23 AAAAAATAAAAAAAAAAAAAAAG
125281 19/21 AAAAAAAAATAAGAAAAAAAA
125856 19/21 AAAAAAAATGAAAAAAAAAAA
126268 22/24 AAAAACAAAAAAAAAAAAAACAAA
127586 18/20 TTTTTTTTTTTTATTTTTTG
127829 18/20 AAAAAAAATGAAAAAAAAAA
130006 20/22 AAAAAAAGAAAAAAAAAACAAA
131956 20/22 AAAAAAAAAAACAAAAAAATAA
133244 18/20 TTTTTTGTTTTTTTTTTTTA
135261 19/21 AAAAAAAACAAAAAAAAACAA
137418 24/26 TTTTTATTTATTTTTTTTTTTTTTTT
140253 29/32 TTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTC
143544 18/20 AAAAAAAATAATAAAAAAAA
144708 24/26 TTTTTTTTTTTTTTTTTTTTGGTTTT
151103 22/24 TTTTTTTTTTTTTTTTCTTTTTTG
156130 18/20 TTTTTTCTTTTTTTCTTTTT
160946 18/20 AAAAAAAAAAAAAAGAAAAG
162296 18/20 AAAAAAAAAAAAAAAGAAAT
165614 18/20 AAAAAATAAAAAAAAAAAAC
165959 18/20 TTTTTTTGTTGTTTTTTTTT
169591 20/22 AAAAAAAAAACAAAAAAAAAAG
177310 18/20 AAAAAAAAAAAAAAAAAACT
178526 18/20 AAAAATAAAAAAAAAAAACA
179693 20/22 TTTTTTTTTTTTTTTTTTTTGC
181382 26/28 AAAAAAAAAAGAAAAACAAAAAAAAAAA
186014 18/20 AAAAAAGAAAGAAAAAAAAA
188077 23/25 AAAAAAAAAAAAGACAAAAAAAAAA
189703 19/21 TTTTTTTTTTTTTGTTTTTTC
192944 18/20 TTTTTTTTGGTTTTTTTTTT
193236 18/20 TTTTTATTTTTTTATTTTTT
193588 24/26 AAAAAAAAAAAAAAAAAAACAAAAAC
193785 21/23 TTTTTGTTTTTTTTTTTTATTTT
196009 20/22 AAAAAAAGAAAAAAAGAAAAAA
197528 18/20 CCCCCCCCCCCCTCCCCCCA
197824 20/22 AAAAAGATAAAAAAAAAAAAAA
198014 18/20 AAAAAAAAACAGAAAAAAAA
199451 18/20 AAAAAAAAAAAAAAGAAAAT
202715 18/20 TTTTTAATTTTTTTTTTTTT
205243 24/26 AAAAAAAAAAAAAAAAAAAAAAAATT
209825 23/25 AAAAAAAAGAAGAAAAAAAAAAAAA
222316 19/21 TTTTTTTTTATTTTTTTTTTC
225312 23/25 AAAAAAAAAAAAAAAAGTAAAAAAA
227554 19/21 CCCCCCCCCCCCCCCCCCCTT
228485 19/21 AAAAAAAAAAAAAAAGAAAAC
229537 19/21 AAAAAAAAAAAAAAAAAGAAG
229826 19/21 TTTTTTTTTATTTTTTTTATT
240891 19/21 GGGGGGGGGGGGGGGGGGGAC
241134 20/22 AAAAAAAAAAATAAAAAAAGAA
241457 18/20 TTTTTTTTTTTTTTTTTAAT
241756 22/24 AAAAAAAAAAAAAAAAAAACAACA
246405 21/23 AAAAAAAAAATAAAAAAAAAAAT
246591 22/24 TTTTTTTTTTTTTTTTTTGTTTCT
247105 23/25 AAAAAAAAAAAAAAAACAAAAAAAC
249637 25/27 AAAAAAAAAAAAATTAAAAAAAAAAAA
250399 21/23 TTTTTTGTTTTGTTTTTTTTTTT
250573 18/20 AAAAAAAAAAAAATATAAAA
253893 20/22 AAAAATAAAAAAGAAAAAAAAA
257622 24/26 TTTTTTTTTTTTTTTTTGTTTTTTAT
260346 18/20 TTTTTTTTTTTTTTGTTTTG
278118 21/23 TTTTTTTTTTGTTTTTTTTTTTA
278917 24/26 TTTTTTTTCTTTTTTTTTTTTTTTGT
280997 18/20 TTTTTTTTTTTTTTTTTTGC
286572 22/24 TTTTTTTTTTTTTTTTTTTAATTT
291903 18/20 AAAAACAAAAAAAAAAAATA
293288 22/24 TTTTTTGTTTTTTTTTTTTTTTTG
295205 22/24 AAAAATAAAAAAACAAAAAAAAAA
295952 32/35 AAAAAGAAAAAAAAAAAAAAAAAAAAAAAGGAAAA
297667 18/20 TTTTTTTTTTTTTTACTTTT
309807 21/23 TTTTTATTTTTTTTTTTTTTATT
312938 19/21 AAAAAAAAAAGAAAAAAAAAC
313105 20/22 AAAAAAAAAAAAAAAACAAAAG
----------------------------------------------------------------------------
Total sequence length......................... 313965
Total number of repeats detected.............. 111
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 59 45 2 2
30 to 39 1 1 0 0
40 to 49 0 1 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 60 47 2 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290927|gb|AE003444.1|AE003444 Drosophila melanogaster genomic scaffold 142000013386054 section 28 of 35, complete sequence
Position Repeat-length Repeat
526 18/20 AAAAAAACAAAAAAATAAAA
1886 38/42 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCTT
3209 19/21 AAAAAAAAAATAAAAAAAAAG
15604 26/28 TTTTTTTTTTGTTTATTTTTTTTTTTTT
16677 19/21 AAAAACAAACAAAAAAAAAAA
17622 18/20 TTTTTTTTTTTTTTGTTCTT
22080 18/20 TTTTTGTTTGTTTTTTTTTT
30314 18/20 AAAAAAAAAAACAAATAAAA
31664 25/27 TTTTTTTGTTTTTTGTTTTTTTTTTTT
34774 24/26 AAAAAAAAATTAAAAAAAAAAAAAAA
37422 23/25 TTTTTTTTTGTTTTTTTTGTTTTTT
39181 19/21 TTTTTTGTTTTTTGTTTTTTT
61094 30/33 TTTTTTTTTTTTTTTTTTTTTGGTTTTTTTCTT
64453 19/21 TTTTTGTTTTTTTTTTTCTTT
67271 19/21 AAAAAAAAAAAAAAAAAACAG
68103 18/20 AAAAAAAAAAAAAACAAAAC
81196 21/23 AAAAAAAAAAACAAAAGAAAAAA
82448 24/26 TTTTTTTTTTTTTTTTTTTTTTTGTC
83123 20/22 TTTTTTTCTTTTTTTTTTTTCT
84248 23/25 AAAAAAGACAAAAAAAAAAAAAAAA
86898 18/20 AAAAAAAGAAAAAAAGAAAA
91770 18/20 TTTTTTTTTTTTTGTCTTTT
94145 21/23 AAAAAAAAAAATAAAACAAAAAA
96091 25/27 TTTTTTCTTTGTTTTTTTTTTTTTTTT
103656 21/23 AAAAAAAAAAAAAAAAAAAAATT
106886 20/22 TTTTTTTTTTTTTTGTTTATTT
107335 21/23 TTTTTTTTTTTTTTTAGTTTTTT
108964 24/26 AAAAAAAAAAAAAAACTAAAAAAAAA
116056 19/21 AAAAACAAAAAAAAAAAAACA
118535 18/20 AAAAAGAAAAAAAAAAGAAA
124484 21/23 TTTTTTTTTTTTTTTTTTTCTTA
124874 26/28 TTTTTTTTTTTTTTTTTTTTTGTATTTT
125632 22/24 AAAAAAAAAAAAATAAAAATAAAA
128171 21/23 AAAAAAAAAAAAAAAAAATGAAA
136327 22/24 AAAAAAAAAAAAAAAAACAAGAAA
146472 18/20 TTTTTGTTTTTTTTTTTTCT
152168 24/26 AAAAAAAAAAAAACAAAAAAACAAAA
159473 19/21 TTTTTTTGTTGTTTTTTTTTT
160594 24/26 TTTTTTTTTTTTTTTTTTTTTTTTGG
166230 18/20 AAAAAAAAAAAAAAAAAACC
167061 23/25 TTTTTTTTTTTTTTTTTTTTTTGTA
191474 19/21 GGGGGGGGGGGGGGGGGAGAG
199221 18/20 AAAAAAAAAAAAAAAAGAGA
200096 23/25 TTTTTTTATTTTTTTTTTTTATTTT
203697 20/22 TTTTTTTTTTTTTTGTTTTTGT
215762 19/21 AAAAAAAAAAAAAAAAAGAAT
218153 19/21 AAAAATAAAAAAAAAATAAAA
225778 19/21 TTTTTCTTTTTTTTTTTTCTT
228601 18/20 AAAAAAGAAAAAAGAAAAAA
228829 20/22 AAAAAATAAAAAAAAAAGAAAA
228871 24/26 TTTTTTCATTTTTTTTTTTTTTTTTT
230433 18/20 AAAAAAAAGAAAAAGAAAAA
241050 18/20 CCCCCGCCCCCCCCCCCTCC
246183 24/26 GGGGGAGGGGGGGGGGGGGGTGGGGG
250513 20/22 TTTTTTTTTTTTTTAGTTTTTT
252973 20/22 AAAAAAATAAAAAAAAAAACAA
257567 21/23 TTTTTTTTTTTTTTTTTCATTTT
264003 28/31 TTTTTTTTTTTTTTTGTTTTTTGTTTTTTGT
264328 18/20 AAAAAAAAAAAAACAAAAAC
267887 22/24 AAAAAAAAAAAAAAAAAATAGAAA
277391 22/24 AAAAAAAAAAAAAAAAAAAAATAG
280737 20/22 AAAAAAAAAAAAACAAAAAACA
288607 20/22 AAAAAAAGAAAAAAAATAAAAA
289621 20/22 CCCCCCCCCCCCCCCCCTCCAC
----------------------------------------------------------------------------
Total sequence length......................... 300710
Total number of repeats detected.............. 64
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 32 25 2 2
30 to 39 0 2 0 0
40 to 49 1 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 33 27 2 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290880|gb|AE003443.1|AE003443 Drosophila melanogaster genomic scaffold 142000013386054 section 27 of 35, complete sequence
Position Repeat-length Repeat
26861 21/23 TTTTTTTTTTTTTTTTTTTGTAT
39456 21/23 AAAAAAAAAAAAAAAAAACAAAT
54566 26/28 TTTTTTTTTTTTTTTTTTTTTTTTTTGG
58701 24/26 TTTTTTTTTTGTTTGTTTTTTTTTTT
58955 19/21 TTTTTTTTTTTTTTTTTTGTA
59507 18/20 AAAAAAAAAAACAAAACAAA
73144 18/20 AAAAAAAGAAACAAAAAAAA
73810 22/24 TTTTTTTTTTATTTTATTTTTTTT
74329 19/21 AAAAAAAAAAAACAAAATAAA
76305 25/27 TTTTTTTTTTTTATTTTTTTTTTATTT
77671 24/26 TTTTTTTTTTTTTTTTTTTTTTTTAA
82009 19/21 AAAAAAAAAAAAGAAAAAATA
89492 19/21 TTTTTTTCTTCTTTTTTTTTT
90691 20/22 AAAAAAAAACCAAAAAAAAAAA
90726 22/24 AAAAAAAAAAAAAGAAAAAAACAA
92445 18/20 AAAAAACAAAAAAAAAAACA
94149 19/21 TTTTTTTTTTTTTTTTTGTCT
94692 18/20 AAAAAAAAAAAGAAAAAGAA
94933 20/22 TTTTTTTTTTTTATTTTTTTAT
125976 18/20 TTTTTTTTTTTTTTGTATTT
126482 21/23 AAAAAAAAAAAAAACAAGAAAAA
146244 18/20 TTTTTATTTTTTTTTTTTTA
146934 18/20 TTTTTTTTTTTTTTCGTTTT
152213 18/20 TTTTTTTTTTTTTTTTTCTA
166643 20/22 TTTTTTTTTCGTTTTTTTTTTT
168495 18/20 AAAAAAAAAAAATAAAAAAT
169822 20/22 TTTTTTTTTTGTTATTTTTTTT
174650 20/22 GGGGGGGGAGGGGGAGGGGGGG
178372 18/20 AAAAAAAAAAAAAAAAAGAG
178817 21/23 AAAAAAGAAAATAAAAAAAAAAA
179664 24/26 TTTTTTTTGTTTTTTTTTTTTATTTT
186887 21/23 AAAAAAAAAAAGAAAAAAAAAAG
188195 26/28 TTTTTTTTTTGTATTTTTTTTTTTTTTT
198698 23/25 AAAAAAAAAAAAAAAAAAAAAAATG
201157 18/20 AAAAAAACAAAAATAAAAAA
204097 19/21 AAAAAAAAAAAAGAAAAAATA
210457 18/20 TTTTTTTTTTTACTTTTTTT
214770 20/22 AAAAAAAAATATAAAAAAAAAA
217552 22/24 TTTTTTTTTTTTTTTGTTTTTCTT
219360 19/21 AAAAAACAAAAAAAAAAAAGA
221937 19/21 TTTTTTTTTTCTTTTTTTTTC
228158 18/20 TTTTTTTTAATTTTTTTTTT
233576 18/20 TTTTTTTTTTTTTTTGCTTT
234745 23/25 TTTTTTTTTTGTTTTTTTTTTTTTG
236726 18/20 AAAAACAAAAAAAAAAAATA
239884 22/24 AAAAAAAAAAAAAAAATAAATAAA
240850 19/21 AAAAAAAAAAAAAAAAATAAC
242023 19/21 TTTTTTTTTTTTTTTTGTCTT
242984 19/21 AAAAACAAAAAAAAAAAAAAG
248094 20/22 AAAAAAAAAAAAAACAAAAAAT
248656 18/20 TTTTTTTTTTTTTTTTGTTG
257511 19/21 TTTTTTTTTTTGTTTTTTGTT
259442 21/23 TTTTTTTTTTTTGCTTTTTTTTT
260250 19/21 AAAAACAAAAAAAACAAAAAA
269522 18/20 AAAAAAAAAATAAAAAAAAT
270893 18/20 AAAAAAAAAAACAAAACAAA
277007 21/23 AAAAAAAAAGAAAAAAACAAAAA
278695 19/21 AAAAAAAAAACCAAAAAAAAA
279445 19/21 GGGGGGGGGGGGGGGGAGGTG
280369 25/27 TTTTTATTTATTTTTTTTTTTTTTTTT
297237 18/20 AAAAAAAAAAAAAACAAAGA
----------------------------------------------------------------------------
Total sequence length......................... 302357
Total number of repeats detected.............. 61
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 30 29 2 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 30 29 2 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290831|gb|AE003442.1|AE003442 Drosophila melanogaster genomic scaffold 142000013386054 section 26 of 35, complete sequence
Position Repeat-length Repeat
463 18/20 TTTTTTTTTTTTTTATTGTT
4130 21/23 TTTTTTGTTTTTCTTTTTTTTTT
23560 20/22 AAAAAAAAAGAAAAAAATAAAA
31379 19/21 AAAAAAAAAAAAAAAGAAGAA
34491 25/27 TTTTTTTTTTTTTTTTTTTTTTTTGTG
36586 25/27 AAAAAAAAAAAAACAAAACAAAAAAAA
43046 23/25 AAAAAAAAAAAAAAAAAAAAAAATT
43529 18/20 AAAAAAAAAAAAAAAAAGCA
69604 19/21 AAAAAAAAAAAAAACAAACAA
70261 18/20 AAAAAGCAAAAAAAAAAAAA
118909 19/21 TTTTTTTGCTTTTTTTTTTTT
147716 22/24 AAAAAAAAAAAAAAAAACAATAAA
159817 22/24 TTTTTTTTTTTTTTTTTTGTTATT
161032 18/20 TTTTTCTTTTTTTTTTTTTG
168299 18/20 CCCCCCCCCCCCCTCTCCCC
171557 19/21 AAAAAAAAAAAAAAAAAACAT
177879 23/25 TTTTTTGTTTTTTTTTTTTTTTATT
191933 22/24 AAAAAAAAAAAAAACAAAAAAATA
197365 18/20 AAAAAAAAAAAAAATAGAAA
205906 19/21 TTTTTTTTTTTATTTTTTTTA
209122 21/23 TTTTTTTTTTTTTTTTTTTTTGC
209403 28/31 AAAAAAAAAAAGAAAGAAAAAAAAAAAAAAC
216134 19/21 AAAAAAAAACAAAAAAAAAAT
221060 19/21 TTTTTTTTTGTTTTGTTTTTT
222692 21/23 AAAAAAAAAAAAATAATAAAAAA
224863 19/21 TTTTTTTTTATTTTTTTTTTC
225456 24/26 TTTTTTTTTTTTTTTTTTTTTTGATT
231659 21/23 AAAAAAAAAAAAAAAACAAAATA
232656 25/27 TTTTTTTTATTATTTTTTTTTTTTTTT
233191 26/28 TTTTTTTTTTTTTTTTTTTTTTTTTGCT
235295 19/21 TTTTTTTTATTTTTTATTTTT
241234 21/23 TTTTTATTATTTTTTTTTTTTTT
243976 23/25 AAAAAAAAAACGAAAAAAAAAAAAA
244683 19/21 TTTTTTTCATTTTTTTTTTTT
257379 20/22 AAAAAAAAAACAATAAAAAAAA
259861 19/21 AAAAAAAAAAAAAAAAAAACT
275309 24/26 TTTTTGGTTTTTTTTTTTTTTTTTTT
276106 21/23 TTTTTTTTTTTTCTTTTTCTTTT
282259 21/23 TTTTTTTTTAATTTTTTTTTTTT
291363 19/21 TTTTTTGTTCTTTTTTTTTTT
----------------------------------------------------------------------------
Total sequence length......................... 306267
Total number of repeats detected.............. 40
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 17 21 0 1
30 to 39 1 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 18 21 0 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290819|gb|AE003441.1|AE003441 Drosophila melanogaster genomic scaffold 142000013386054 section 25 of 35, complete sequence
Position Repeat-length Repeat
648 21/23 AAAAAAAAAAAAAAAACGAAAAA
6761 30/33 TTTTTTTTTTTTGTTTTGTTTTTTTTTTTTTTG
12079 18/20 TTTTTTTTTTTTGTTTTTTC
19853 19/21 AAAAAAAAAAATAAATAAAAA
28368 21/23 AAAAAAAAAAAAAAAGAAAAAAT
30077 18/20 AAAAAAAAAAAAAAACAATA
37614 18/20 TTTTTTTTTTTTTTTTTTGG
47756 25/27 TTTTTTTTTTTTTTTTTTTTTGTTGTT
51815 21/23 TTTTTTTTTTTTTTTCTTTTTCT
58859 18/20 AAAAAAAAATATAAAAAAAA
63760 19/21 TTTTTTTTTTTTTTTTGGTTT
64147 21/23 TTTTTTTTTCTTTTTTTTTTTGT
64829 26/28 AAAAAAAAAAAACCAAAAAAAAAAAAAA
66064 19/21 AAAAAAAAAGAAAAAACAAAA
69919 24/26 AAAAAAAAAAAAAAAACAAAAAAAGA
73799 18/20 AAAAAAACAAAAAAAAACAA
75934 21/23 TTTTTTCTTTTCTTTTTTTTTTT
76428 24/26 TTTTTTTTTTATTTTTTTTTTTTTTG
86121 22/24 AAAAACAAAAAACAAAAAAAAAAA
87091 22/24 TTTTTTTTTTTTTTTTTTTTTTGG
90163 22/24 TTTTTTATTTTCTTTTTTTTTTTT
98375 18/20 AAAAAAAAAAAAATAGAAAA
102453 18/20 TTTTTCTTTTTTTTTTTTAT
103108 19/21 TTTTTATTGTTTTTTTTTTTT
103427 18/20 TTTTTTTTTTTGTTTTTTGT
103669 19/21 AAAAAAAAAAAAAATAAAACA
105071 25/27 TTTTTTTTTTTTTTTTTTGTTTTTTTC
116669 22/24 TTTTTCTTCTTTTTTTTTTTTTTT
118037 22/24 TTTTTTTTTTCTTTTTTTTTTTTG
119599 19/21 AAAAAAAAAGAAAATAAAAAA
128740 19/21 AAAAAAAAAAAAAGAAGAAAA
135699 22/24 AAAAAACAAAAAACAAAAAAAAAA
140927 18/20 TTTTTTTTTTGTTTTGTTTT
152077 18/20 AAAAAAAAAATAAAAAGAAA
152285 23/25 AAAAAAAAAAAAAAAAAAGAAAAGA
153932 22/24 TTTTTTTTTTTTTTTTTTTTAATT
160694 19/21 TTTTTTTGTTTTTTTTTTATT
161933 18/20 AAAAAAAATAAAAAAAAGAA
169905 19/21 TTTTTTTGTTTTTTGTTTTTT
185251 19/21 AAAAAAAAAAAACCAAAAAAA
185527 18/20 TTTTTTTTTTTTTATTCTTT
185828 18/20 AAAAAAAAAAATCAAAAAAA
189050 34/37 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCAG
197202 19/21 TTTTTTTTTTTTTTTTTGTTC
198007 24/26 AAAAAAGAATAAAAAAAAAAAAAAAA
205037 21/23 AAAAAAAAAAAAAAAAAGAAAAG
232307 21/23 GGGGGGGTTGGGGGGGGGGGGGG
234407 20/22 AAAAAAAAAAAAAAACAAAATA
241053 19/21 TTTTTTTTTTTTTTTGGTTTT
241468 18/20 AAAAAAAAACAAAAAAAGAA
247163 18/20 AAAAAAAAAATAAAAAAAAC
255454 22/24 TTTTTTTTTTGTTTTTTGTTTTTT
269516 18/20 GGGGGGAGGGGTGGGGGGGG
270056 35/38 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATTTG
----------------------------------------------------------------------------
Total sequence length......................... 285272
Total number of repeats detected.............. 54
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 25 24 2 0
30 to 39 1 2 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 26 26 2 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290801|gb|AE003440.1|AE003440 Drosophila melanogaster genomic scaffold 142000013386054 section 24 of 35, complete sequence
Position Repeat-length Repeat
1494 25/27 AAAAAAAAAAAAAAAAAAACCAAAAAA
4045 20/22 TTTTTTTTTTTTTTTTTTTTCG
6853 19/21 AAAAAAAAAAAAAAAAAAACG
12667 21/23 AAAAAAAAAAAAAATAAAAGAAA
15589 22/24 AAAAAACCAAAAAAAAAAAAAAAA
18618 20/22 AAAAAAAAAAAAAAAAAAAATG
20618 26/28 AAAAAAAAAAAAAACAAAAAAAAAAAGA
21336 19/21 TTTTTTTTTTTTTTTTTTTGC
26567 26/28 TTTTTTTTTTTTTTTTTTTTTTGTTATT
27008 27/30 TTTTTTTTTTTTTTTTTTTTTTTGTTCTTC
27701 18/20 AAAAAAAAAAAAAAAACAGA
29929 21/23 TTTTTTTTTTTTTTACTTTTTTT
37988 34/37 TTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTGC
43260 25/27 AAAAAAAAAAAAAAAAAAAAAAAAATT
53163 18/20 TTTTTTTTTTTTGTTGTTTT
57082 21/23 TTTTTATTTATTTTTTTTTTTTT
57515 22/24 AAAAAAAAAAAAAAATAAATAAAA
59130 18/20 TTTTTTTTTTTTTTTTGTTC
59421 18/20 TTTTTTTTCTTTTTCTTTTT
63122 20/22 TTTTTTGTTTTTTTTTTTTTCT
63522 18/20 AAAAAGAAAAAAAAAAAACA
65009 24/26 AAAAAAAAAAAAAAAATAAAAAAAAC
78014 18/20 AAAAAAAAAAAAAAAAATAC
78468 18/20 TTTTTTTTTTTTTTGTATTT
86299 18/20 AAAAAAAAAAAAAAAACGAA
91511 18/20 CCCCCCCCCCCCCCCCACTC
92790 18/20 AAAAAAAAAAAAATAAATAA
97207 26/28 AAAAAAAAAAAAAAAAAAAAAAAAGGAA
103109 18/20 TTTTTTTTTTTTTTTTTTGC
104327 22/24 AAAAAAAAAAAAAAAAAAGAAGAA
106221 20/22 TTTTTTTTTTTTTTTTATTTGT
108598 19/21 AAAAAATAAAAAAAATAAAAA
109260 18/20 AAAAAAAAATAAAAAATAAA
114403 25/27 TTTTTTTTTTTTTTTTTTTTTTTTTGG
120984 22/24 TTTTTTTTTTTTTTTTTGTTTCTT
123605 20/22 AAAAAAAAAAAAAAACAAAATA
125104 24/26 TTTTTTATTTTTTTTTTTTTTTTTTG
126402 21/23 TTTTTTTTTTTTTTTTTTTGATT
133652 18/20 TTTTTTTTTGTTTTGTTTTT
139386 18/20 TTTTTCTTTTTTTTTTTCTT
146071 24/26 TTTTTTGTTTTTGTTTTTTTTTTTTT
146503 26/28 TTTTTTTTTTTTTTTTTTTTTTTTTTGG
147992 25/27 TTTTTTGTTTTTTTTTTTTTTGTTTTT
157037 18/20 AAAAAAAAAAAAAAAAAATT
157427 27/30 AAAAAAAAAAAAAAAACAAAAAAAAAACAG
161214 21/23 AAAAAAAAAAAAAAAAAAAAACT
177342 21/23 AAAAAAAAAAAAAAAAAGAAACA
177800 21/23 AAAAAAAAAAAAAACAAAATAAA
195598 18/20 TTTTTTGTTGTTTTTTTTTT
196315 20/22 AAAAAACAAAAAAAAAAAAAAT
199793 22/24 AAAAAAAAAAAAAATAAAATAAAA
204278 20/22 AAAAAAAAAAAATACAAAAAAA
209164 21/23 TTTTTTTTTTTTTTTTGTATTTT
211024 18/20 AAAAAAAAAAAACAATAAAA
211416 23/25 AAAAAACAAAAAAAAAAAAAAATAA
217152 20/22 TTTTTTTTTTTTTTGTTTTGTT
223298 24/26 TTTTTTTTTTTTATTTTTTATTTTTT
224238 18/20 GGGGGGGGGGGAGGGGGTGG
232328 24/26 TTTTTTTGTATTTTTTTTTTTTTTTT
239312 19/21 TTTTTTTTTTTTTGTTTTATT
247055 19/21 TTTTTTTTTTTTTTTGTTTTG
251066 18/20 TTTTTTTGGTTTTTTTTTTT
259317 18/20 AAAAAAATAAATAAAAAAAA
259431 19/21 AAAAAAAAAAAAAACAAAACA
261804 18/20 TTTTTTTTTTTTTTTGCTTT
267236 26/28 AAAAAAAAAAAAAAAAAAAAAAAAACAT
267889 18/20 TTTTTTAATTTTTTTTTTTT
268947 19/21 TTTTTTGTTTTTTTTTTTTAT
284922 21/23 TTTTTTCATTTTTTTTTTTTTTT
287874 18/20 AAAAAAAAAAAAACACAAAA
302584 18/20 TTTTTTTTTTTTTTTTTGCT
309213 25/27 TTTTTTTTTTTTTTTTTTTGTCTTTTT
313589 18/20 AAAAAATTAAAAAAAAAAAA
314792 21/23 AAAAAAAAAAAAAAAAAAAACAG
322294 19/21 AAAAAAAAAAAAAAAAAAATG
327751 23/25 TTTTTTTGTTTTTTTTTTGTTTTTT
333521 21/23 AAAAAAAAAAAAAAAAAAACACA
336845 21/23 AAAAAAAAAAAAAAAAAACACAA
----------------------------------------------------------------------------
Total sequence length......................... 342068
Total number of repeats detected.............. 78
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 37 36 1 1
30 to 39 1 2 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 38 38 1 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290764|gb|AE003439.1|AE003439 Drosophila melanogaster genomic scaffold 142000013386054 section 23 of 35, complete sequence
Position Repeat-length Repeat
26 18/20 TTTTTGTTTTTTCTTTTTTT
4474 18/20 TTTTTTTTTAATTTTTTTTT
14645 23/25 TTTTTTTTTTTTATTTTTTTGTTTT
16781 26/28 TTTTTTTTTTTTTTAATTTTTTTTTTTT
21148 18/20 AAAAAAAAAAAAAATAAGAA
41571 18/20 TTTTTTTTTTTTTGTTTTTG
43468 18/20 CCCCCCCCCCCCCCCCCTTC
46061 19/21 CCCCCCACCCCCCCCTCCCCC
46914 18/20 TTTTTTTTTTTTTTTTTTAC
55654 18/20 AAAAAAAAAAAACGAAAAAA
62042 29/32 TTTTTTTCTTTTGTTTTTTTTTTTTTTTTTTG
62768 18/20 TTTTTTTTTTTTTTTACTTT
63543 23/25 TTTTTTTTTTTTTTTTTTTGGTTTT
63752 32/35 AAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAAAAC
65927 22/24 AAAAAAAAAAAAAAAATAAAATAA
66316 21/23 AAAAAAAAAAAAATAAAAAAAAC
70195 18/20 TTTTTTTTTTGCTTTTTTTT
70394 25/27 AAAAAAAAAAATAAAAAATAAAAAAAA
80696 22/24 AAAAAAAAAAAACAAAACAAAAAA
81725 24/26 AAAAAAAAAAAAACAAAAAAAAAACA
94555 21/23 GGGGGGGGGGGGGGGGGGGGGAA
99492 21/23 AAAAAAAAAAAAAAAAAAAAACT
110297 19/21 AAAAAAAAAAAAAAAAAACAT
131767 21/23 TTTTTTTTTTTTTTGTTTTGTTT
187175 19/21 AAAAAAAAAAAAAATAAATAA
187329 24/26 AAAAAAAAAAAAAAAAAAAAAATATA
222643 20/22 TTTTTTTTTTCTTTTTTTTTTA
226285 18/20 TTTTTTTTTTTTTTTAATTT
229525 19/21 TTTTTTTTTTGTTTTTTTTAT
229580 18/20 AAAAAAAAAAAGAAAAACAA
231978 19/21 TTTTTTTTTTTTTTTTTCTGT
232515 24/26 TTTTTTGTTTGTTTTTTTTTTTTTTT
238041 20/22 TTTTTTTTTTTTTTTTTGGTTT
239633 18/20 AAAAAAGAAAAACAAAAAAA
241009 18/20 TTTTTGTGTTTTTTTTTTTT
245088 19/21 AAAAAAAATAAAAAAAAATAA
245985 20/22 AAAAAAAAGAAAAAAAAAAAGA
246725 19/21 TTTTTTTTTTTTTTTTTTTGG
253939 19/21 AAAAAAAAAAGAAAAAACAAA
268340 22/24 TTTTTTTCTTTTTTTTTTTTGTTT
272416 21/23 TTTTTTTTTTTTTTTTTTTTGTA
280120 21/23 TTTTTTTTCTTTTTTTTTTGTTT
306798 18/20 AAAAAAAAAAATAAAAAACA
313263 24/26 TTTTTTTTTTTTTTTTTTTTGATTTT
324686 19/21 AAAAAAAAAAAAATAAATAAA
325755 18/20 TTTTTTTTTTTTTTGATTTT
327504 19/21 AAAAAAAAACAAAAAAAATAA
----------------------------------------------------------------------------
Total sequence length......................... 328089
Total number of repeats detected.............. 47
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 19 23 1 2
30 to 39 1 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 20 24 1 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290724|gb|AE003438.1|AE003438 Drosophila melanogaster genomic scaffold 142000013386054 section 22 of 35, complete sequence
Position Repeat-length Repeat
2040 20/22 AAAAAAAAAAAAAAAAAAACAC
5495 19/21 TTTTTTTTTTTTTTTTTTGGT
6604 19/21 AAAAAAAAAAAAAAAACAGAA
9777 23/25 AAAAAAAATAAAAAAAAAAAAAAAC
15161 18/20 AAAAAAAAAAAAAATAATAA
31969 22/24 AAAAAAAAAAAAAAAAAAAATCAA
45589 23/25 AAAAAAAAAAAATAAATAAAAAAAA
46346 18/20 AAAAAAAAAAAACATAAAAA
56566 22/24 AAAAAAAAAAAGAAGAAAAAAAAA
68840 22/24 AAAAAAAAAAAGAAAAAAAAAACA
69736 19/21 TTTTTTTTTTTTTTTTTTTAG
80074 19/21 TTTTTTTTTTGTTTTTTTTTG
82323 21/23 TTTTTCTCTTTTTTTTTTTTTTT
83988 19/21 AAAAAAAAAAAAAAAATAAAT
85371 19/21 TTTTTTTGTGTTTTTTTTTTT
88896 20/22 TTTTTATTTTTTTTTTGTTTTT
90085 23/25 AAAAAAAAAAAAAAAAAAAAAAATG
91629 21/23 TTTTTTTTTTTTTGTATTTTTTT
93209 18/20 TTTTTGGTTTTTTTTTTTTT
96840 23/25 AAAAAAAAAACAAAAAAAAAAACAA
100273 25/27 AAAAAAAAAAAAAAAAAAAAAACGAAA
100704 18/20 TTTTTTGTTTTTTTTTTTGT
103853 22/24 TTTTTTTTTTGTTTTTTTTTTTTC
105581 18/20 AAAAAATACAAAAAAAAAAA
112034 19/21 AAAAAAAAAAAACAAAAATAA
112182 20/22 TTTTTTTTTTTTTTGTTTCTTT
112986 30/33 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAC
119901 19/21 AAAAAAAAATATAAAAAAAAA
123760 24/26 TTTTTTTTTTTTTTTTTTTTTTTGTA
125926 21/23 AAAAAAAAAAAAAAAAAACTAAA
131904 22/24 TTTTTCTTTTTCTTTTTTTTTTTT
149249 19/21 TTTTTTTTTTGCTTTTTTTTT
156738 19/21 TTTTTTTTTTTTTTTTATTTA
175422 21/23 AAAAAAAAAAAAAAATACAAAAA
178296 19/21 AAAAAAAAAAAAAAAAAAATG
178663 18/20 TTTTTTTTTTTTTTGTTGTT
179000 19/21 TTTTTTTTTTCGTTTTTTTTT
180581 20/22 AAAAAAAAACAAAAAAAAAATA
186071 20/22 TTTTTTTTTTTGTTTTGTTTTT
187797 24/26 AAAAAAAAAAAAGAAAAAAAAGAAAA
200335 25/27 AAAAAAAAAAAAATAAAAAAAAAAATA
208927 18/20 GGGGGGGGGGGGGGGGGATG
211651 41/45 TTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATGG
212844 31/34 AAAAAAAAAAAAAAAAATAAAAAAAATAAAAAAT
230201 20/22 TTTTTTTTTTTTTTTATTTCTT
241276 23/25 TTTTTTGTTTTTTTTTTTTTTTTTG
266705 21/23 TTTTTTTTTTTTTTTTTTTTTAA
298257 20/22 TTTTTGTTTTTTTTTCTTTTTT
----------------------------------------------------------------------------
Total sequence length......................... 299372
Total number of repeats detected.............. 48
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 22 22 1 0
30 to 39 2 0 0 0
40 to 49 0 1 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 24 23 1 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290686|gb|AE003437.1|AE003437 Drosophila melanogaster genomic scaffold 142000013386054 section 21 of 35, complete sequence
Position Repeat-length Repeat
6085 19/21 TTTTTTTTTTTTTTCTTTTTG
28922 23/25 TTTTTATTTTATTTTTTTTTTTTTT
30599 26/28 AAAAAAAAAAAAAAGAAAAGAAAAAAAA
44896 20/22 AAAAAAAAAAAAACAAAATAAA
69106 18/20 TTTTTATTGTTTTTTTTTTT
79408 18/20 AAAAAAATAAAAAAAAAAAC
110044 23/25 CCCCCCCCCCCCCCCCCGCCCCACC
138850 19/21 AAAAAAAAAAAAAAAAATGAA
143655 20/22 TTTTTATTTTTTTTTTTTTTTG
146205 18/20 TTTTTTTTTTTTTTTTTGCT
146331 19/21 AAAAAAAAAAAGAAAAAAAAT
146785 21/23 AAAAAAAATTAAAAAAAAAAAAA
147396 19/21 AAAAAAAAAAAAACAAAAAGA
155011 22/24 TTTTTTTTTTTGGTTTTTTTTTTT
162875 29/32 AAAAAAAAAAAAAAAAAAAAAAAAAAAGATGA
179561 23/25 TTTTTTTTTTTTTTTGTTTTTTTGT
193757 20/22 TTTTTTTTTTTTAATTTTTTTT
195548 23/25 TTTTTTTTTTTTTTTTTTATTATTT
202078 23/25 TTTTTTTTTCTTTTTTTTTTTTTTG
202999 19/21 TTTTTTTTTTTTTTTGTTTTG
203649 22/24 AAAAAAAAAAAAAAAAAGAAAACA
203893 19/21 AAAAAAAAAAAAAAAAAAGGA
228801 18/20 TTTTTTTTTTTTTTATTTGT
230476 23/25 TTTTTGTTTTTTTTTTTTTTTTTTG
247996 24/26 TTTTTTTTTTTTTTTTTTTTCTTTTC
248652 25/27 AAAAAAAAAAAAAAAAAAAAAGGAAAA
255800 24/26 AAAAAAAAAAAAAAAAAACAAACAAA
258212 41/45 AAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAATAAAAAAAGAAT
260511 26/28 TTTTTTTTGTTTTTTTTTTTTTGTTTTT
262574 21/23 TTTTTTATTTTTATTTTTTTTTT
267679 20/22 TTTTTTTTTTCTTTTTTTTTTC
271082 18/20 TTTTTTGTTTTTTTTTTTTG
273847 20/22 AAAAAAAAAGAAAAAAGAAAAA
275785 19/21 AAAAAAAAAAAATAAATAAAA
275970 19/21 AAAAAATAAAAAACAAAAAAA
277543 22/24 AAAAAAAAAAAAAATAAAGAAAAA
277850 24/26 AAAAAAAAAAAAAAAAAAAACCAAAA
280821 31/34 AAAAAAAAAAAAAAAAAAAAAGGAAAAAAAAGAA
282864 18/20 AAAAAAAAAAAAAAGAAAAT
285363 19/21 AAAAAAAAAAAAAGAAAAAAG
296323 22/24 AAAAAAAAAAAAAACAAAAAAAAT
----------------------------------------------------------------------------
Total sequence length......................... 305046
Total number of repeats detected.............. 41
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 19 18 0 1
30 to 39 2 0 0 0
40 to 49 1 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 22 18 0 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290653|gb|AE003436.1|AE003436 Drosophila melanogaster genomic scaffold 142000013386054 section 20 of 35, complete sequence
Position Repeat-length Repeat
5625 33/36 AAAAAAAAAAAAAAAGAAAAAAAAAAACAAAAAAAC
17824 29/32 TTTTTTTTTTTTGGTTTTTTTTTTTTTTTTTA
20930 21/23 TTTTTTTTTTTTTTTTTTTTTGA
25624 19/21 AAAAAAAAAAAAAAAAACAAT
29196 18/20 TTTTTTTTTTTTATATTTTT
47851 25/27 TTTTTTTCTTCTTTTTTTTTTTTTTTT
50403 18/20 AAAAAAAAACAAAAAAACAA
51175 18/20 TTTTTTTTTTTTATATTTTT
55372 20/22 TTTTTTTTTTTTTTTTAATTTT
77880 18/20 AAAAACAAAAAAAAATAAAA
83964 24/26 AAAAAAAAAAAAAAAAAAAACAGAAA
100699 28/31 TTTTTTTTTTTTTTTTTTTTTTTTTTGTAAT
130462 18/20 AAAAAAAAAAAGAAATAAAA
171114 18/20 AAAAAATAAGAAAAAAAAAA
187309 19/21 TTTTTTTTTTTTGTTTTGTTT
189461 23/25 TTTTTTTTTTCTTTTTTTTTTTTTG
192542 19/21 AAAAAAAAAAAACATAAAAAA
208650 23/25 TTTTTTTTTTTTTTTTGGTTTTTTT
224121 19/21 AAAAAACCAAAAAAAAAAAAA
225327 20/22 AAAAAAAAAAAAAAATGAAAAA
229494 21/23 TTTTTTTTTTTTTTTTTTTTTGA
240062 26/28 TTTTTTTTTTTTTTGTTTTTTTTTTTTC
257550 19/21 TTTTTTCTTTTTTTTTTTTTG
272869 19/21 AAAAAAAAAAATAAAAAATAA
281161 18/20 AAAAAAAAAAAAAGAAAACA
282934 21/23 TTTTTTCTTATTTTTTTTTTTTT
285336 26/28 TTTTTTTTTTTTTTTTTTTCTTATTTTT
286632 20/22 AAAAAAAAAAGAAAAAAGAAAA
292302 25/27 TTTTTTTTTTTTTTTTTTTTTTTTTGG
305786 20/22 AAAAAAAAAAAAAAAAAAATAT
----------------------------------------------------------------------------
Total sequence length......................... 307017
Total number of repeats detected.............. 30
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 13 14 0 0
30 to 39 1 2 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 14 16 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290600|gb|AE003435.1|AE003435 Drosophila melanogaster genomic scaffold 142000013386054 section 19 of 35, complete sequence
Position Repeat-length Repeat
23041 21/23 GGGGGGGGGGGGGGAGGGGGGGT
30091 20/22 AAAAAAAAAAAAAAAAGAACAA
49865 21/23 TTTTTTTTGTTTTTTTTTTTTTG
50457 18/20 GGGGGGAGGGGGGGAGGGGG
52221 19/21 TTTTTTTTTTTTTTGTTTTGT
73706 20/22 TTTTTTGTTTTTTTTTTTTTTG
75367 19/21 AAAAAAAAAAACAACAAAAAA
81527 18/20 AAAAACAAAAAAAAAAAAAT
86134 20/22 AAAAAAAAAAACAAAAAAAAAG
97448 21/23 TTTTTTTTTTTTTTTTTTAATTT
104943 27/30 AAAAAAAAAAAAAAAAAAAAAAAAATATAT
119535 21/23 AAAAAAAAAAAAAAAAAGAATAA
129309 25/27 AAAAAAAAAAAAAACAAAAAAGAAAAA
132201 18/20 AAAAAAAAAAAAAAACAACA
141121 20/22 AAAAAAAAAACAAAAAAAATAA
141212 18/20 TTTTTTGTTTGTTTTTTTTT
142573 19/21 TTTTTTGTTTTTTTTTTTTTA
143456 19/21 AAAAAAAAATAAAAAAAAACA
176524 18/20 AAAAAAAAAAAAAAAGAGAA
193232 18/20 AAAAAAAAAAAAAAGAAACA
199357 18/20 CCCCCCCCCCCCCCCTTCCC
201257 23/25 TTTTTTTTTTTTTTTTTTTTTTGCT
208084 18/20 TTTTTTTTTTTTTTATTTTC
208690 23/25 TTTTTTTTTTTTTTTTTTTTTTTGC
208945 18/20 AAAAAAAAAAAACAAAAACA
213857 22/24 AAAAAAAAGAAAATAAAAAAAAAA
234565 19/21 AAAAAAAAAAAAAAACAGAAA
234632 21/23 CCCCCCCTCCCCCCCCCCCACCC
241181 22/24 AAAAAAAAAAAAAAAAACAAGAAA
247285 21/23 AAAAAAAAATAAAAAAAAAAAAC
271312 24/26 AAAAAAAAAAAAAAACAAAAAACAAA
272974 18/20 AAAAAAAAAAATAAAACAAA
275271 20/22 TTTTTTTTTTTTTTTATTTTGT
296104 20/22 TTTTTTCCTTTTTTTTTTTTTT
299663 19/21 AAAAATAATAAAAAAAAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 300557
Total number of repeats detected.............. 35
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 19 11 2 2
30 to 39 1 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 20 11 2 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290572|gb|AE003434.1|AE003434 Drosophila melanogaster genomic scaffold 142000013386054 section 18 of 35, complete sequence
Position Repeat-length Repeat
11179 29/32 AAAAAAATCAAAAAAAAAAAAAAAAAAAAAAT
15491 34/37 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACAT
21129 19/21 CCCCCCCCCCCCCCCCTCCAC
24675 24/26 TTTTTTTGTTTTTTTTTTTTCTTTTT
24806 22/24 TTTTTTTTTATTATTTTTTTTTTT
26472 19/21 TTTTTTTTTTCTTTTTTTTCT
31621 25/27 AAAAAAAAAAAAAAAAAAAAAAACTAA
32776 23/25 AAAAAAAAAAAAAAAACAAAAAAAT
33715 23/25 CCCCCCCCCCCCCCCCCGCCCCTCC
40719 18/20 AAAAAAATAAAAAAATAAAA
44067 23/25 TTTTTTGTTTTTTTTTTTTTTTTGT
45257 18/20 AAAAAATAAAAAATAAAAAA
51703 26/28 AAAAAAAAAGAAAACAAAAAAAAAAAAA
60942 19/21 AAAAAAAAAAAAAAAATAAAG
65177 25/27 AAAAAAAAAAAACAAAAAAAAAAAAAT
69911 21/23 AAAAAAAAAAAAAAAACAATAAA
70124 20/22 TTTTTTTTTTTTTTTTTTTTAC
70694 26/28 AAAAAAAAAAAAAAAAACCAAAAAAAAA
71822 19/21 AAAAAAAAAAGAAAAAGAAAA
72059 20/22 AAAAAAAAAAAAAATAAATAAA
72367 19/21 TTTTTTTTTTTTTTTTTTGAT
73142 19/21 AAAAAAAAAAACAAAAAAAGA
73550 19/21 AAAAAAAAAAAAAAACGAAAA
74345 18/20 AAAAAAAAAAAAAATAATAA
79567 24/26 AAAAAAAAAAAAAACAAAAAAAAAAC
80216 24/26 AAAAAAAAAAACAAAACAAAAAAAAA
85430 18/20 TTTTTTTTTTTGTTTTTTAT
90248 21/23 TTTTTTTTTCTTTTTTTTTTGTT
110575 18/20 AAAAAAAAAAAGTAAAAAAA
113028 21/23 TTTTTTATTTTTTGTTTTTTTTT
113665 18/20 TTTTTATTTTTTTTTTTTTA
115875 18/20 GGGGGGGGGGGGCGGGGCGG
116848 19/21 TTTTTTTTTTGTATTTTTTTT
119190 24/26 TTTTTTTTATTTTTTTATTTTTTTTT
123441 28/31 TTTTTTCGTTTTTTTTTTTTTTTTTTTTTGT
123961 26/28 AAAAAAAAAGAAAAAAAAAAAAAAAACA
130406 20/22 TTTTTTTCTGTTTTTTTTTTTT
130529 22/24 AAAAAAAAAAAAAAAAAAAAACAG
133090 25/27 TTTTTTTTTTTCGTTTTTTTTTTTTTT
138228 25/27 AAAAAAAAAAAGAAAAAAAAAAAAACA
141417 26/28 AAAAAAAAAAAAAAAAAAAAAACGAAAA
144568 18/20 AAAAAAAAAAAAAAAATAGA
144988 19/21 TTTTTTTTTTTTTTTTTGTAT
146096 22/24 AAAAAAAAAAGAAAAAAAAAATAA
151077 23/25 AAAAAAAAAAAAAAAAAAACAAAGA
157357 18/20 AAAAAAAAAAAAAAAACAAT
169980 20/22 AAAAACAAAAAAAAAAAAAATA
170479 18/20 TTTTTTTTTTTTTTTTTGGT
174733 26/28 AAAAAAAAAAAAAAAAAGAAAAAAAAAT
182709 22/24 TTTTTTTTTTGTTTTTTTTTTTTA
182883 18/20 AAAAAAAAAAAACAAAATAA
187628 20/22 TTTTTTTTTTTTTTTTGTTTTG
196083 21/23 AAAAAAAAAAAAGAAAAACAAAA
213140 19/21 GGGGGGGGGGGGGGGGGGAGT
245932 19/21 AAAAAAGGAAAAAAAAAAAAA
246124 21/23 TTTTTGTTTTTTTTTTTTTCTTT
248532 25/27 TTTTTTTTTCGTTTTTTTTTTTTTTTT
260173 23/25 TTTTTTTTTTTTGTATTTTTTTTTT
260390 20/22 TTTTTTTTTGTTTTTTTTTTGT
261777 20/22 TTTTTTTTTTTTTTTTTTTTGA
262336 20/22 TTTTTTCTTCTTTTTTTTTTTT
262990 19/21 GGGGGGGGGGGGGGAGGGAGG
272695 19/21 TTTTTTTTTTTTGTTTTTATT
273239 21/23 TTTTTCTTCTTTTTTTTTTTTTT
277147 21/23 AAAAAAAAAATAATAAAAAAAAA
277395 18/20 AAAAAAATAAAAAAAAAACA
278495 20/22 AAAAAAAAAAATGAAAAAAAAA
283151 18/20 AAAAAAGCAAAAAAAAAAAA
287993 25/27 AAAAAACAAAAAAAAAACAAAAAAAAA
288346 20/22 TTTTTTTTTTTTTTTTTTGTAT
291602 19/21 AAAAAAAAAAAAAAAATGAAA
291654 19/21 AAAAAAAAAAAAAAAAAAACT
292064 19/21 AAAAAACAAAAAAAAAAAACA
301525 18/20 TTTTTTTTTTTTTTTGTTAT
----------------------------------------------------------------------------
Total sequence length......................... 302937
Total number of repeats detected.............. 74
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 38 28 3 2
30 to 39 1 2 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 39 30 3 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290549|gb|AE003433.1|AE003433 Drosophila melanogaster genomic scaffold 142000013386054 section 17 of 35, complete sequence
Position Repeat-length Repeat
5762 21/23 TTTTTTTTTTTTTGTTCTTTTTT
6908 19/21 TTTTTTTTTTGTTTTTATTTT
8867 22/24 TTTTTTTTTTTTTTATTTTTTATT
11227 20/22 AAAAAAAAAAAAAGAAAATAAA
13844 18/20 AAAAAAAAAAAAAAACCAAA
16986 21/23 TTTTTTTTTTTTTTTTTTTTTAG
18303 20/22 AAAAAAAAAAAAAACAGAAAAA
18434 21/23 AAAAAAAAAACCAAAAAAAAAAA
18689 21/23 TTTTTTTTTTTTTTTTGTTTTTG
21606 24/26 AAAAAAAAAAACAAAAAAAAAAACAA
28481 19/21 AAAAAAAAAAAAAAATAAACA
31497 20/22 AAAAAAAAAAAAAAAAAAGGAA
32579 22/24 AAAAAAAAAAAAGAAAAAAAAAAC
32836 18/20 AAAAAAAAAAAAAAATGAAA
32973 18/20 TTTTTTTTTTTTTTGTTTCT
33734 30/33 TTTTTATTGTTTTTTTTTTTTTTTTTTTTTTTG
36317 19/21 AAAAAAACAAAAAAAAAAAAT
36534 24/26 AAAAAAAAAAAAAAGAAAAAAAAAAG
37003 20/22 TTTTTTTTTTTTTTTTAGTTTT
38331 18/20 AAAAAAAAAAAAATCAAAAA
46091 20/22 AAAAAAAAGAAAAAAAAAAACA
48352 19/21 TTTTTTTTTTTTTTTTTGTTG
50757 20/22 TTTTTATATTTTTTTTTTTTTT
63990 18/20 AAAAAAAAAAAAACAAAAAT
64719 18/20 TTTTTTTTTTTTTTTTTTAA
65056 37/41 AAAAAAAAAAAAAAAAAAAAAAAAAAACCGAAAAAAAAACA
66227 21/23 AAAAAAAAAAAAAAAAAACCAAA
67049 22/24 AAAAAAAAAAAGGAAAAAAAAAAA
67666 20/22 TTTTTTTTTTTTTTTTTTGTGT
68576 22/24 AAAAAAAAAAAAAGAAAAAAAAAC
80546 19/21 AAAAAAAAAACAAAAAAAACA
80832 22/24 TTTTTTTTTTGTTTTTTGTTTTTT
82152 19/21 AAAAAAAAAAAGAAAAAATAA
82781 22/24 TTTTTTTTTTTTTTTTTTTTTTGG
87210 22/24 TTTTTTTTTTTATTTTTTTTTTAT
87369 21/23 AAAAAAAAAAAAAAAAAAAAATC
93000 33/36 AAAAAAAAAAAAAAAAAAATAAATAAAAAAAAAATA
102158 23/25 TTTTTTTTTTTTTTTTTTTTTTGGT
103445 25/27 AAAAAAAAAAAAAAAAAAAAAAAATTA
104556 20/22 TTTTTTTTTTTTTTTTTTTTGC
106804 19/21 TTTTTTTTTTTTTTTATTTCT
109596 18/20 AAAAAAAAAAGATAAAAAAA
110053 20/22 TTTTTTTTTTTTTTTTTGTTTG
110179 18/20 AAAAAAAAAAAAAAGAAAAG
111279 18/20 TTTTTTTTTTTTTTTTTTAA
111569 19/21 TTTTTTTTTTTTTGTTTTGTT
117974 20/22 TTTTTTTTAATTTTTTTTTTTT
118822 25/27 AAAAAAAAAAAGAAAAAAACAAAAAAA
118850 23/25 AAAAAAAAAGAAAAAAAGAAAAAAA
118876 26/28 AAAAAAAAGAAAAAAAAGAAAAAAAAAA
123900 18/20 TTTTTTTTTCTTTTTTTTTA
124759 21/23 TTTTTTTTTTTTTTCTTTTTTGT
133655 19/21 AAAAAAAAAAAATAAAAAAGA
134773 24/26 AAAAAAAAAAAAAAAAAACAAGAAAA
135073 22/24 TTTTTTCTTTTTTTTTTTTTTTTA
137370 26/28 AAAAAAAAAAAAAAAAAAAAAAAGAAAT
137784 18/20 CCCCCCCCCCCCCCCCTACC
139138 24/26 TTTTTTGTTTTTTTTTTTTTTTTTTG
141826 19/21 AAAAAAAAAAAAAAAACAACA
143858 22/24 TTTTTTTATTTTTTTTTTTTTTTG
146069 19/21 AAAAAGAAAAAAAAGAAAAAA
148493 18/20 AAAAAAAAAATAAAAAAAAG
149752 20/22 AAAAAAAAAAAAAATAAATAAA
149845 19/21 AAAAAAACCAAAAAAAAAAAA
151299 25/27 AAAAAAAAAGAAAAAAAAAAACAAAAA
154629 18/20 AAAAAATGAAAAAAAAAAAA
159019 19/21 GGGGGGGGGGGGGGGGCGAGG
161132 23/25 TTTTTTTTTTTTTTTTGTTTTGTTT
163099 18/20 TTTTTGGTTTTTTTTTTTTT
164270 22/24 AAAAAAAAAATAAAAAAATAAAAA
168886 26/28 TTTTTTTTTTTTTTTTTTTTTTTTGTGT
172107 19/21 TTTTTTTTTTTTTTATATTTT
175566 18/20 TTTTTTCTTTTTTTTTTTTG
175702 22/24 AAAAAAAAAAAAAAGAGAAAAAAA
175952 18/20 AAAAATAAAAAAAAAAAAAC
177871 19/21 AAAAAAAAAAAAGAAAAAATA
178173 25/27 TTTTTTTTTTTTGTTTTTTTTTTTTTG
179093 22/24 AAAAAAAAAAAAAAAATAAAATAA
182437 29/32 TTTTTTTTTTTTATTTTTTTTTTTTTTATTTA
186244 19/21 TTTTTGTTGTTTTTTTTTTTT
187812 25/27 TTTTTTTTTTTTTTTTTTTTTATTTTA
198655 31/34 TTTTTTTTTTTTTTTTTCTTTTTTTTGTTTTTTC
202914 21/23 AAAAAAAAAAAAAAGAAAAATAA
204337 21/23 TTTTTTTTTTTTTTTTTTTCTTC
206224 18/20 AAAAAAAACCAAAAAAAAAA
215660 22/24 AAAAAAAAAAAAACAAAAAAAAAT
218832 19/21 AAAAAAAAAAATGAAAAAAAA
230046 22/24 AAAAAAAAAAAATAAATAAAAAAA
230967 18/20 CCCCCCCCCCCCCCCTCCCT
234378 18/20 AAAAAAACAAAAAAAAAACA
235394 18/20 AAAAAAAAAAAAAATAAGAA
235480 18/20 AAAAAAAAAAAATAATAAAA
263109 19/21 TTTTTCTTTTATTTTTTTTTT
263131 18/20 TTTTTTTTTTTTTCGTTTTT
266235 19/21 TTTTTTTTTTTTTTTTTTGCT
266929 25/27 TTTTTTTCTTTTTTTTTTTTTTTTTTG
267531 18/20 TTTTTTTTTTGTTTTTTTTC
267816 18/20 AAAAAAAAGTAAAAAAAAAA
268829 20/22 TTTTTTTTTTTTTTTTTTGTTG
272017 18/20 TTTTTTTTTTTTTTTTTATC
276813 20/22 TTTTTTTTTTCTTATTTTTTTT
277145 21/23 TTTTTTTTTATTTTTTTTTTATT
278362 25/27 AAAAAAAAAAAAAAAAGAAAAAAAAAG
285270 26/28 AAAAAAAAAAAAAAAAAAGAAAACAAAA
287347 21/23 AAAAAGGAAAAAAAAAAAAAAAA
295128 28/31 AAAAAAAAAAAAAGAAAAAAAAAAACAAACA
296123 21/23 AAAAAAAAACAAAAAAAAAAAGA
----------------------------------------------------------------------------
Total sequence length......................... 303258
Total number of repeats detected.............. 107
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 54 44 1 2
30 to 39 2 3 0 0
40 to 49 1 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 57 47 1 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290523|gb|AE003432.1|AE003432 Drosophila melanogaster genomic scaffold 142000013386054 section 16 of 35, complete sequence
Position Repeat-length Repeat
19 28/31 TTTTTTTTTTTTTTTTTTTTTTTTTTTATCG
7565 20/22 TTTTTTTTTTTGTTTTTCTTTT
8151 24/26 TTTTTTTTTTTTTTTTTTTCTTATTT
9174 23/25 AAAAAGAAAATAAAAAAAAAAAAAA
11354 21/23 AAAAAAAAAAACCAAAAAAAAAA
14859 21/23 TTTTTTTTTTTTTTTTTTTTTGG
17199 19/21 CCCCCCCCCCCACCCCCCCCA
20437 25/27 AAAAAAAAAAAAAAAAAAAAAAAACTA
29937 19/21 TTTTTATTTTTTTTTTTTTTG
30637 32/35 TTTTTTTTTTTTTTGTGTTTTTTTTTTTTTTGTTT
31396 22/24 TTTTTTTTTTTTTTTTTTTTTTAC
41286 18/20 TTTTTTTTTTTTATTTTTGT
50146 23/25 AAAAAAAAAAAAAAAAACAACAAAA
51851 18/20 AAAAAAAAAAAAAAACGAAA
53723 22/24 AAAAAAAAACAAAAAAAAAAAAAC
58508 19/21 GGGGGGGGGGGCGGGGGGGGT
61315 24/26 AAAAAAAAAAAAATAAAAAAAAATAA
61471 18/20 GGGGGGGGGGGGCGGGGTGG
75358 23/25 TTTTTGTTGTTTTTTTTTTTTTTTT
85991 20/22 TTTTTTTTTTTTTTTTTTTTGC
91475 30/33 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACG
96924 26/28 AAAAATAAAAAAAAAAAAAAACAAAAAA
103297 18/20 TTTTTTTTTTTCTTTTTTTG
111144 19/21 AAAAAAAAAAACAAAAAACAA
117567 22/24 TTTTTTTTTTTTTTTTTTTCATTT
140292 25/27 TTTTTTTTTTTTTTTTGTTTTTGTTTT
140808 18/20 TTTTTTTTTTTTTTTTTCCT
150404 18/20 TTTTTTTTTTTTTTTTGTTC
150701 22/24 AAAAAAAAAAAAAAAAAACAGAAA
153366 18/20 TTTTTTTCGTTTTTTTTTTT
154704 19/21 TTTTTTTTATTCTTTTTTTTT
157724 18/20 AAAAAAAAAAAACAAAAAAC
160544 27/30 TTTTTTTTTTTTTTTTTTTTTTTTGTTTGC
164414 19/21 CCCCCCCCCCCCCTCCCCCCA
165418 19/21 GGGGGGGGGGGGGGGGGTGGC
166562 20/22 AAAAAAAAAAATAAAATAAAAA
169424 22/24 TTTTTTTTTTTTTTTCTTTTCTTT
172014 23/25 AAAAAAAAAAATAAAAAAATAAAAA
176804 20/22 AAAAAAAATAAAAAAAAAAATA
183342 21/23 TTTTTTTTCATTTTTTTTTTTTT
189952 25/27 TTTTTTGTTTGTTTTTTTTTTTTTTTT
190113 18/20 AAAAAAAGAGAAAAAAAAAA
200358 18/20 TTTTTATTTATTTTTTTTTT
204505 18/20 TTTTTTTTTGTTTTTTTTTC
214120 23/25 AAAAAACAAAAAAAAAAAAAAAACA
217551 19/21 TTTTTTTTTCTTTTTTTTTTG
226796 22/24 AAAAAAAAAAAAAAAAAAATATAA
228423 23/25 TTTTTTTTTTTTTTTTCCTTTTTTT
231860 19/21 TTTTTTTTTTTTTTTTTTTGC
232482 20/22 TTTTTTTTTTTTTTTTTTTTGC
234957 18/20 AAAAAAAAATAAAAAAATAA
242036 19/21 TTTTTTTTTTTTTTTTAGTTT
242279 18/20 TTTTTTTTATATTTTTTTTT
242504 22/24 AAAAAACAATAAAAAAAAAAAAAA
245237 23/25 TTTTTTTTTTGTTTTTTTTTTTTTG
251843 18/20 AAAAAAAAAAAAAAAAACTA
256286 19/21 TTTTTTTCTTTTTTTTTTTAT
269709 23/25 AAAAAAAAAAAAAAAAAAAAACAGA
270252 18/20 AAAAAAAAAAAAAACAAAAC
277706 21/23 TTTTTTTTTTTTTTTTTTTTTAA
278147 21/23 TTTTTTTTTCTTTCTTTTTTTTT
278555 20/22 TTTTTTTTTTTTTTTTTCTTTA
279247 19/21 TTTTTTTTTTTTTGTTTTTTG
281904 19/21 TTTTTTTTTTTTTTTTTTTAA
299409 19/21 TTTTTTTTTTTTTTTTATTTA
300679 18/20 TTTTTGTTTTTTTTTTTTTG
301591 24/26 TTTTTATTTTTGTTTTTTTTTTTTTT
301910 19/21 AAAAAAAAAAGAAAAAAAAAT
302883 25/27 TTTTTTTTTTTTTTTTTTTTTTTTTGA
304064 18/20 AAAAAAAAAAAAAAAAAATC
304370 20/22 AAAAAAAAAAAAAAAAAAGACA
305480 19/21 AAAAAAAAAAAAAAAAAAATT
306413 26/28 TTTTTTATTTTTTTTTTTTTTCTTTTTT
309577 18/20 TTTTTTTTTTTTTTTTTGTC
310924 25/27 TTTTTTTTTTCATTTTTTTTTTTTTTT
313488 18/20 AAAAAAAAAAATTAAAAAAA
313893 21/23 TTTTTTTTTTTTTTTTTTTTTAA
314247 19/21 AAAAACAAAAAAAAAAAAAAC
318362 18/20 AAAAACAAAACAAAAAAAAA
318497 21/23 TTTTTTTTTTTTTTTTTTTTTGC
318920 22/24 TTTTTTTTTTGTTTTTTTTTTTAT
----------------------------------------------------------------------------
Total sequence length......................... 319596
Total number of repeats detected.............. 81
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 29 43 3 2
30 to 39 0 4 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 29 47 3 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290491|gb|AE003431.1|AE003431 Drosophila melanogaster genomic scaffold 142000013386054 section 15 of 35, complete sequence
Position Repeat-length Repeat
505 22/24 TTTTTTTTTTCTTTTTTTTTTTTG
6848 23/25 AAAAAAAAAAAAAAAAAAAAAAACT
9685 18/20 TTTTTTTTTTTTTGGTTTTT
11850 26/28 AAAAAAAAAAAAAAAAAAAAAAACCAAA
12037 23/25 AAAAAAAAAAAATATAAAAAAAAAA
12625 21/23 TTTTTGATTTTTTTTTTTTTTTT
15646 21/23 TTTTTTCTTTGTTTTTTTTTTTT
15758 18/20 CCCCCCCCCCCCCCCCCCGT
18050 31/34 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTG
20350 18/20 AAAAAAAAAAAGAGAAAAAA
23949 21/23 TTTTTTTTTTTTTTTTCGTTTTT
24948 21/23 AAAAAAGAAAAAAAAAAAAAAAC
27009 18/20 TTTTTTTTTTTGTTATTTTT
27132 19/21 TTTTTTTTATTTTTTTTTATT
28691 20/22 GGGGGGGGGGGGGGAGAGGGGG
40490 21/23 TTTTTTTTTTTTTTTTTTTGTAT
41426 23/25 AAAAAAAAAAAAAAAACAAAACAAA
41612 23/25 AAAAAAAAACTAAAAAAAAAAAAAA
43298 21/23 TTTTTTTTTTTTTTTTGTGTTTT
43586 18/20 TTTTTCCTTTTTTTTTTTTT
44840 20/22 TTTTTCTTTTTTTTTTTTTTTG
45669 20/22 AAAAACAAAAAATAAAAAAAAA
46617 19/21 TTTTTTTATTCTTTTTTTTTT
46849 19/21 AAAAAAAAAAAACAGAAAAAA
49148 21/23 TTTTTTTTTTTTTTTTGTTTTTC
51868 25/27 AAAAAAAAAAAAAAAACAAAAAAAAAC
52490 28/31 TTTTTTTTTTTTGGTTTTTTTTTTTTTTTTG
53434 19/21 CCCCCCCCCCCCCTCCTCCCC
56534 31/34 AAAAAAAAATAAAAAAAAGAAAAAAAAAAAAACA
59019 30/33 AAAAAAAAAAAAAAATAAAATAAAAAAAAACAA
59427 25/27 AAAAAAAAAAAAAAAAAAAGAGAAAAA
59477 21/23 AAAAAAAAAAAAAAAAAAACACA
64340 18/20 AAAAAAAAAAAAAAAAAATG
66665 23/25 TTTTTTTTTTTCGTTTTTTTTTTTT
67743 18/20 TTTTTTTTTTTTTTATTATT
68005 25/27 AAAAAAAAAAAAAAAGAAGAAAAAAAA
70057 18/20 AAAAAAAAAAAAATAGAAAA
71071 24/26 AAAAAAAAAAAAAAAAAAAAAATAGA
72404 20/22 TTTTTTTCTTTTTTTTTTTATT
72804 26/28 TTTTTTTTTTTTTTTTTTTTTTGCTTTT
77342 29/32 AAAAAAAAAAAAAAAAAAAAAAAAAGGAAGAA
79697 19/21 TTTTTTTTTTTTTTTTTTGCT
82626 23/25 AAAAACAAAATAAAAAAAAAAAAAA
84235 18/20 TTTTTTGTTTTTTTTTTTGT
84324 20/22 TTTTTTTTTTTTTTTTTTTTGA
89369 19/21 AAAAAAAAAAAAAAAAAATAG
91147 23/25 TTTTTTTTTTTTTTTTTTTTTTGCT
96295 24/26 AAAAAAAAAAAAAAAAAACAAACAAA
100490 20/22 AAAAAAAAAACAAAAAAAAATA
109439 18/20 AAAAAAAATGAAAAAAAAAA
150919 19/21 TTTTTTTTTTCCTTTTTTTTT
155397 25/27 TTTTTTTTTTTTTTTGCTTTTTTTTTT
157042 22/24 TTTTTTTTTTTTTTTTTTTTGTCT
165735 23/25 AAAAAAAAAACACAAAAAAAAAAAA
167380 25/27 AAAAACAAAAAAAACAAAAAAAAAAAA
174704 21/23 AAAAAAAAAACGAAAAAAAAAAA
180573 19/21 TTTTTTTTTTGTTTTTGTTTT
181277 20/22 AAAAAAAAAAAAAAAAAAAAGC
183353 22/24 TTTTTATTTTTTTTTTTTTTTTGT
199854 22/24 TTTTTTTTTTTTTTTGTTTTTTTC
219267 20/22 AAAAAAAAAAAAACAAAAAAAC
221037 20/22 AAAAAAAAAAAAAAAAAATACA
221621 20/22 AAAAAAAAAACAAAAAAAAAAT
225949 20/22 GGGGGGGGGGGGGGGGAGGTGG
236898 23/25 AAAAAAAAAAAGAAAAAAAAAACAA
256348 24/26 AAAAAAAAAAACAAAAAACAAAAAAA
265421 26/28 AAAAAAAAAAAAAAATAAAGAAAAAAAA
272260 26/28 TTTTTTTTTTTTTTTTTGTTTTTTGTTT
272545 18/20 TTTTTTTTTTTTTGTTTTTA
273175 22/24 TTTTTTATTTTTTCTTTTTTTTTT
275155 19/21 TTTTTTTTTTTTTTTTTTTGG
275325 19/21 AAAAAAAAAAAAAAAAAATAG
277695 21/23 AAAAACAAAAAAAAAACAAAAAA
281575 29/32 TTTTTTTTTTGTTTTTTTTTTTTTTTTTTTGG
282277 18/20 AAAAAAATAAAAAAAAAAAC
283930 20/22 TTTTTTTTTTTTTTTTTTCGTT
285724 20/22 TTTTTTTTTTTTATTTTTATTT
287054 23/25 AAAAAAATAAAAAAAAATAAAAAAA
287925 19/21 AAAAAAAAAAAAAAAAAAAGT
288092 20/22 TTTTTTTTTTTTTTTTTATTTC
303019 23/25 TTTTTTTCTTTTTTTTTTTTTTTTA
----------------------------------------------------------------------------
Total sequence length......................... 311408
Total number of repeats detected.............. 81
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 36 35 2 2
30 to 39 3 3 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 39 38 2 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290460|gb|AE003430.1|AE003430 Drosophila melanogaster genomic scaffold 142000013386054 section 14 of 35, complete sequence
Position Repeat-length Repeat
23299 23/25 AAAAAAAAAAAAAAATAAAAAAAAT
25559 21/23 TTTTTTTTTTTTTTTTCTGTTTT
35309 18/20 AAAAAAAAAAAAAGAAAACA
38831 21/23 TTTTTTTTTTTTTTTTATTTTGT
44456 20/22 TTTTTTTTTTTTGTGTTTTTTT
44964 18/20 TTTTTTTTTTTTTTTTGTTA
46214 19/21 TTTTTTTTTTTTTTTTTTTGG
46939 20/22 TTTTTTTTTTTTTTGATTTTTT
54014 19/21 TTTTTTTTTTTTTTTTTTTGG
55887 20/22 AAAAAAAAAAAAAAAAAAAACC
56218 23/25 TTTTTTTTTGTTTTTTTTTTCTTTT
59920 21/23 TTTTTGTGTTTTTTTTTTTTTTT
61916 18/20 TTTTTATTTTTTTCTTTTTT
71843 21/23 AAAAAAAAAAACGAAAAAAAAAA
77930 19/21 AAAAAAAAAAAAATAATAAAA
80877 23/25 TTTTTGTTTTTTTTTTTTTTTTTTG
82815 19/21 AAAAAAAAAAAAAAAAAAATT
92909 19/21 TTTTTTTTTTTTTTTTTTGTA
93053 22/24 AAAAAAAAAAAAAAAAAAAAAACG
95362 33/36 TTTTTTTTTTTTTTTTTTTTTTTTTTTGATTTTTTG
105549 24/26 AAAAAAAAAAAGAAAAAAAAAAACAA
110042 18/20 TTTTTTTTTTTTTTTGTTCT
112786 26/28 TTTTTTTTTTTTTTTTTTTTTTTTGTTG
117243 20/22 TTTTTTTTTTTTTTTTGTCTTT
130891 18/20 AAAAAAAAAAAAATGAAAAA
151466 21/23 AAAAAAAAAACAAAAAAAAAATA
172634 19/21 CCCCCCCCCCCCCCCCCACCA
199960 18/20 TTTTTTTTTTTTTTTTCTCT
201303 21/23 TTTTTTTTTTTTTATTTTTTTGT
201501 19/21 AAAAAAAATGAAAAAAAAAAA
202912 18/20 TTTTTTTTTTTTGTTTTCTT
209077 21/23 AAAAAAAAAAAAACAAAGAAAAA
212917 19/21 AAAAAAAAAAAAAAATGAAAA
215501 22/24 TTTTTTTTTTTTTTTTTTTTTTGC
217225 23/25 AAAAAAAAAAAAAAAAAACCAAAAA
217641 18/20 CCCCCCCCCCCCCCCCATCC
235757 18/20 TTTTTTTTTGTTTTGTTTTT
237949 19/21 TTTTTTTTTTTGTTTTGTTTT
240262 26/28 AAAAAAAAAAAAAAAAACCAAAAAAAAA
243182 23/25 AAAAACAAAAAAAAAAAACAAAAAA
247146 22/24 TTTTTTTTTTTTTTTTTGTTTTTG
247293 25/27 TTTTTTTTATTTTTTTTTTTTTTTTTG
247592 22/24 TTTTTTTCTTTTTTTTTTTTTTTG
290614 22/24 TTTTTACTTTTTTTTTTTTTTTTT
293800 26/28 AAAAAAAAAAAAAAAAAAAACAAAATAA
----------------------------------------------------------------------------
Total sequence length......................... 294292
Total number of repeats detected.............. 45
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 17 25 0 2
30 to 39 0 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 17 26 0 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290438|gb|AE003429.1|AE003429 Drosophila melanogaster genomic scaffold 142000013386054 section 13 of 35, complete sequence
Position Repeat-length Repeat
22326 20/22 TTTTTATTTTTGTTTTTTTTTT
48347 20/22 TTTTTTTTTTTGTTTTTTATTT
62327 18/20 TTTTTCTTTTCTTTTTTTTT
96304 24/26 TTTTTTTTGTTTTTTTTTTTTTTTGT
98033 18/20 TTTTTTTTTTTTTTCATTTT
110799 18/20 AAAAAAGAAAAAAAAAAAAT
112020 21/23 TTTTTTTTTCTTTTTTTTTTTTG
115728 19/21 TTTTTTTTTTTTTTTTTTTGC
116714 22/24 TTTTTGTTTTTTTTTTTCTTTTTT
124614 22/24 AAAAAAAAAAACAAAAAAAAAAGA
132847 18/20 TTTTTATTTTTTTTTTTTTC
147770 18/20 AAAAAAAAAAATAGAAAAAA
153968 22/24 TTTTTTTTCTTTTTTTTTTTTTTG
157529 27/30 AAAAAAAAAAAAAAAAACCAAAAAAAAAAC
158059 18/20 AAAAAATAAAAAAATAAAAA
158961 18/20 AAAAAAAAAAAAACAAAACA
168722 21/23 AAAAAAAAAAAAAAAACCAAAAA
176709 19/21 AAAAAAAAAAAAAAAACAAAT
176909 19/21 TTTTTTTTTTTTTTTTTTGTA
177468 21/23 TTTTTTTTTCTTCTTTTTTTTTT
177883 21/23 AAAAACAAAAAAAAAACAAAAAA
178422 18/20 AAAAAAAAAAAAAAAACAGA
183007 18/20 AAAAAAAAAAAAAAAAAAGG
183142 30/33 TTTTTTTTTTTTTTTTTTTTTTTTAATTTCTTT
197797 20/22 AAAAAAAAAAAAAAACAAAATA
200533 19/21 TTTTTTTGTTTTTTTTGTTTT
201229 20/22 CCCCCCCCCCCCCCCAACCCCC
206966 21/23 AAAAAAAAAAAAAATAAAAAAAG
209686 20/22 AAAAAAAAAAGAAAAAAAAAAG
210052 18/20 CCCCCCCCCCCCCCCCCCGT
212883 21/23 AAAAAAAAAAAAGAAAAAAATAA
214889 21/23 AAAAAAAAAAAAAAAAACAAAAC
224436 25/27 TTTTTTTTTTTTTTTTTTGTTCTTTTT
232251 19/21 TTTTTGCTTTTTTTTTTTTTT
238241 18/20 TTTTTTTTTTTTTTTTGTTG
240832 18/20 TTTTTTTTTTTTTTTTAATT
244562 19/21 AAAAAAAAAAAAGAAAAAGAA
249203 21/23 AAAAAAAAAAAAAAAAAAAAATG
249336 19/21 TTTTTTTTATTTTTTTATTTT
250781 23/25 TTTTTTTTTTTCTCTTTTTTTTTTT
254261 30/33 TTTTTTTTTATTTTTTTTTTTTTTTTTATTTGT
259631 23/25 AAAAAAAAAAAATATAAAAAAAAAA
260135 19/21 TTTTTTTTTTTTTTTTTACTT
262682 19/21 TTTTTCTTTCTTTTTTTTTTT
264144 20/22 AAAAAAAAAAACAACAAAAAAA
264356 24/26 TTTTTTTTTTTTATTTTTTTTTTTAT
264894 19/21 AAAAAAAAAAAAAAACTAAAA
267062 22/24 AAAAAAAAAAGAAGAAAAAAAAAA
267829 23/25 TTTTTTTGTTTTTTTTTTTTTTTAT
268909 25/27 AAAAAAAGAAAAAAAAAAAACAAAAAA
271191 19/21 AAAAACAAAAAAAAAAAAACA
289487 21/23 AAAAAAAAAAGAAAAAAAAAAAT
291576 30/33 AAAAAAAAAAAAAACAAAAAACAAAAAAAGAAA
292486 30/33 TTTTTTTTTTTTTGTTTTTTTGTTTTTTTTTCT
295572 23/25 TTTTTTTTTTTTTTTTTTTTTTGGT
----------------------------------------------------------------------------
Total sequence length......................... 297405
Total number of repeats detected.............. 55
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 24 24 0 2
30 to 39 2 3 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 26 27 0 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290425|gb|AE003428.1|AE003428 Drosophila melanogaster genomic scaffold 142000013386054 section 12 of 35, complete sequence
Position Repeat-length Repeat
374 21/23 TTTTTTATTTATTTTTTTTTTTT
8536 20/22 TTTTTTTTTTTTTTTTGTTTGT
22251 23/25 TTTTTTTTTTTTTTTTTTTTGATTT
26979 18/20 TTTTTTTTTTTTTTTAATTT
29861 21/23 TTTTTTTTTTTTTTTTTTGTGTT
31863 22/24 TTTTTTTTTCTTTTTTTTTTTTTG
33100 22/24 TTTTTTTTTTTTTTTTTTGTTTTA
34206 20/22 AAAAAAAAAAAAAAAATAGAAA
36105 22/24 AAAAAAAAAAGAAAAAAAGAAAAA
36334 18/20 TTTTTTTTTTTGTTTTATTT
39786 19/21 TTTTTTTTTTTTTTTTTGTTC
41193 24/26 AAAAAAAAAAAAAAAAAAAAAACTAA
41456 28/31 TTTTTTTTTTTATTTTATTTTTTTTTTTTTG
43238 19/21 AAAAAAAATGAAAAAAAAAAA
44114 19/21 GGGGGGGGGGGGGGGGCGTGG
46038 18/20 AAAAAAAAAAAAAAAAATCA
84332 19/21 TTTTTTTTTTTTTTTTTGTGT
88600 19/21 AAAAAAAAAAAAAAATGAAAA
96172 20/22 AAAAATAAAATAAAAAAAAAAA
106254 26/28 AAAAAGAAAAAAAAAAAAAAAAAAACAA
115699 23/25 AAAAAGAAAAAAAAAAAAAAAAAAC
127460 19/21 TTTTTTTTTTTTTTTTGTTAT
133956 18/20 TTTTTCTCTTTTTTTTTTTT
135765 20/22 TTTTTTTTTTTTTTTGTTTTTA
136957 20/22 AAAAAAAAAACAAAAAAAAACA
137419 21/23 TTTTTTTTCATTTTTTTTTTTTT
141733 22/24 AAAAAAAAAAAAAAAAAAAAAAGT
142225 20/22 TTTTTTTTTTTTTTTTTTTTGA
153239 24/26 AAAAAAAAAAAAAAACAAAAATAAAA
156253 18/20 TTTTTTTTTTTGTATTTTTT
157510 23/25 AAAAAAAAAAAAAACAAAAAAAAAC
159231 19/21 AAAAACAAAAAACAAAAAAAA
162876 20/22 TTTTTTTTTTGTTTTTTTTTTC
164810 22/24 CCCCCCCCCCCCCCCCCCCCCCGG
167553 22/24 AAAAAACAAAAAAAAAAAAAATAA
172958 21/23 AAAAAAAAAAAAATAAAAATAAA
173528 24/26 AAAAAAAAAAAAAAAAAGAAAAAAAG
175757 19/21 TTTTTTTTTTTTGTTTTTTTG
177736 19/21 AAAAAAAAAAAAAGAAAAATA
179223 18/20 AAAAAAAAAAGAAAAAATAA
185849 18/20 AAAAAGAAAAAAAAAACAAA
186586 18/20 AAAAAAAAAAAACACAAAAA
192926 18/20 TTTTTTTTTTTTTTTTTGTA
194086 20/22 AAAAAAGCAAAAAAAAAAAAAA
222540 21/23 AAAAAAAAAAAAAAAAAACAAAT
222669 19/21 TTTTTTTTTTTTTTTTTGTTC
223782 26/28 AAAAAAAAAAAAAAAAAAAAAAAAATAC
225040 21/23 TTTTTTTTTTTTTTTTTTTTGTG
225622 35/38 TTTTTTTTTTCATTTTTTTTTTTTTTTTTTTTTTTTTG
228741 22/24 TTTTTTTTTTTTTTTTTTTTTTAA
229452 18/20 AAAAAAAAAAAACCAAAAAA
230708 27/30 AAAAAAAAAAAAAAAAAAAAAACTAAAAAC
236230 18/20 GGGGGGGGGGGGGGGTGTGG
239771 21/23 TTTTTTTTTTTTTTTAATTTTTT
240350 21/23 TTTTTTTTTTTGTTTTTTTTTAT
240713 23/25 TTTTTTTTTTTTTTTTTTTTTGTTG
244107 20/22 GGGGGGCGGGGGGGGGGGGGGA
247804 29/32 AAAAAAAAAAAAAAAAAGAAAACAAAAAACAA
259438 19/21 TTTTTTTTTTGTTTTTTTTGT
262791 18/20 AAAAAAAAAACAAACAAAAA
263330 19/21 AAAAAAAAAAAAAATAAACAA
265579 19/21 TTTTTTTTTTTTTTTTTTCGT
265893 19/21 TTTTTTTTTCTTTTCTTTTTT
277778 21/23 AAAAAAAAAAAAAAAAAACAGAA
----------------------------------------------------------------------------
Total sequence length......................... 301465
Total number of repeats detected.............. 64
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 28 28 3 1
30 to 39 2 2 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 30 30 3 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290398|gb|AE003427.1|AE003427 Drosophila melanogaster genomic scaffold 142000013386054 section 11 of 35, complete sequence
Position Repeat-length Repeat
9674 18/20 TTTTTTTTTTTTTTTTTGTA
14136 20/22 AAAAAAAAAAAAAAAAAAATAG
14472 25/27 AAAAAAAAAAAAAAAAAAAAAAAGAAG
15707 30/33 AAAAAAAAAAAAAAAAAAAAATAAATAAATAAA
16255 23/25 AAAAAAAAAAAAAAAAAAAAAAGAG
16520 29/32 AAAAAATAAAAAAAAAAATAAAAAAAAAAATA
16683 19/21 AAAAAAAAAAAAAAAAACTAA
25889 20/22 TTTTTTTTTTTTTTGTTTTTTC
26427 18/20 TTTTTTTTTTTTTTTCTTAT
28964 24/26 AAAAAAAAAAAAAACAAAAAAAAAGA
36996 23/25 AAAAACAAAAAAAAAAAAAAGAAAA
40378 21/23 TTTTTTTTTGTTTTTTTTTGTTT
49610 18/20 TTTTTTTTTTTTTTCATTTT
50696 20/22 TTTTTTTTTTGTTGTTTTTTTT
51529 22/24 TTTTTTTTTTTTTGCTTTTTTTTT
52264 20/22 TTTTTCCTTTTTTTTTTTTTTT
53737 24/26 AAAAACAAACAAAAAAAAAAAAAAAA
56508 25/27 TTTTTTTTATTTTTTATTTTTTTTTTT
57557 18/20 TTTTTTTTTTTTTTTTTAAT
58261 22/24 TTTTTTTTTTTGTTTTTTTTTTTC
59330 23/25 TTTTTATTTTTATTTTTTTTTTTTT
60568 28/31 AAAAAAAAAAAAAAAAAAAAAAAAAATTAAG
62591 18/20 TTTTTTTTTATTTATTTTTT
62944 19/21 AAAAAAAAAAAAACAAAAAGA
65414 35/38 AAAAAAAAAAAAAAAAAATAAGAAAAAAAAAAAAAAAT
65676 18/20 AAAAAAAAAAAAAAAAAACT
68316 18/20 TTTTTCTTTTTTTTTTTTTG
75105 20/22 TTTTTTTATCTTTTTTTTTTTT
77454 27/30 AAAAAAAAAAAAAAAAAAAAAAAAAAGACT
80036 21/23 AAAAAAAAAAAAACAAAAAAACA
81804 20/22 AAAAAAAAAAAACAGAAAAAAA
84832 20/22 AAAAAAAAAAAAAAAAAGAACA
86879 20/22 TTTTTTTTCTTCTTTTTTTTTT
88976 18/20 TTTTTTTTTTTTTTCTTTTG
89284 18/20 TTTTTTTTTTGGTTTTTTTT
90013 18/20 TTTTTATTTTTTTTTTTTTG
93194 21/23 AAAAAAAAAACTAAAAAAAAAAA
93372 18/20 AAAAAAAAAATAAAATAAAA
93910 23/25 AAAAAAAAAAAAAAAAAAAAAATAT
96885 19/21 AAAAAAAAAAACAAAGAAAAA
99166 23/25 AAAAAAAAAAAAACACAAAAAAAAA
100269 18/20 AAAAAAAAAAAAACGAAAAA
100641 18/20 TTTTTTTTTTTTCTTTTTTG
101255 23/25 AAAAAAAAAAAAAGAAGAAAAAAAA
102061 18/20 TTTTTCTTATTTTTTTTTTT
104273 18/20 TTTTTTTTTTTTTTGTTTCT
105856 18/20 TTTTTTTTTTTTTTTGATTT
107288 19/21 TTTTTTTTCTTTTTTTTTTAT
107428 22/24 TTTTTTTTGTTTTTTCTTTTTTTT
107664 18/20 AAAAAAAAAAAAAAGAAAAG
112814 18/20 AAAAACAAAAAAAAAAAAAC
112863 21/23 AAAAAACAAAAAAAAAAAAAAAC
115592 32/35 TTTTTTTTTTTTTTTGTTTTTTTTTTTTTTCCTTT
115824 19/21 AAAAAAAAATAAAAAAAAAAT
116278 20/22 TTTTTTTTTTCTTTTTTTTTTG
119050 21/23 TTTTTTTTTTTTTTTTTTTGTAT
122513 21/23 TTTTTTTTTTTGTTATTTTTTTT
134549 21/23 AAAAAAAAAAAAACAATAAAAAA
136868 19/21 AAAAAAAAAAAAAAAAAAACG
140379 24/26 TTTTTTTTTTTTTTTTTTTTTTTATC
140745 19/21 TTTTTTTTTTATTTATTTTTT
140876 20/22 AAAAAAAAAAGAAGAAAAAAAA
141525 23/25 AAAAACAAACAAAAAAAAAAAAAAA
143819 19/21 AAAAAAAAAAAAAAAAGAAAC
143868 18/20 AAAAACAAAAAAAAGAAAAA
150019 19/21 TTTTTTTTTTTATATTTTTTT
150522 21/23 TTTTTTTTTGTTTTTTTTTTTTC
153498 23/25 TTTTTTCTTTTCTTTTTTTTTTTTT
158009 21/23 TTTTTTTCTTTTTTTTTTTTTTG
160227 31/34 TTTTTTTGTATTTTTTTTTTTTTTTTTTTTTTTG
164073 18/20 TTTTTTTTTTTTTTTTTTGA
164878 25/27 TTTTTTGTTTTTTTTTTTTTTCTTTTT
165165 21/23 AAAAAAAAAAAAAAAAATGAAAA
165564 20/22 TTTTTTTTTTTTTTTTTGGTTT
166298 21/23 TTTTTTTTTTTTTTTTTTTTTAG
167676 18/20 AAAAAAAAAAGAAAAATAAA
169804 18/20 TTTTTTTTTTTTTTTTTGTC
169942 18/20 AAAAAAAAAACAAAAAAACA
171021 18/20 AAAAAAAAAAAAAAAAAAGG
172625 19/21 AAAAACTAAAAAAAAAAAAAA
172949 19/21 TTTTTTTTTTCTTTTTTTTTG
181345 25/27 TTTTTTTTTGTTTTTTTTTTTTTTTTA
182620 19/21 AAAAAAAATAAAATAAAAAAA
184194 33/36 AAAAACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAG
185226 19/21 AAAAAAAAAGCAAAAAAAAAA
185501 25/27 AAAAAAATAAAAAAAAAAAATAAAAAA
185805 30/33 AAAAAAAAAAAAAAAAAAAAAGAGAAAAAAAAG
186130 22/24 AAAAAAAAAAAAAAAGAAGAAAAA
188086 19/21 AAAAACGAAAAAAAAAAAAAA
190474 18/20 AAAAAAAAAAAAAAAAAACT
191990 21/23 TTTTTTTTGTTTTTTTTTTTTGT
192650 22/24 TTTTTTTTTTTTTTTTTGTTTTTG
192691 22/24 TTTTTCTTTTCTTTTTTTTTTTTT
193446 19/21 TTTTTTCATTTTTTTTTTTTT
196187 19/21 AAAAAAGAAAAAAAAAAAACA
196885 18/20 AAAAAAAAAAAAAAAAAATG
197160 25/27 AAAAAAAAAAAAAAAAGAAAAAAAGAA
197890 18/20 AAAAAATAAATAAAAAAAAA
199800 19/21 TTTTTTTTTTTCTATTTTTTT
200677 18/20 AAAAAAAAAAAAAAATGAAA
203972 21/23 TTTTTTTTTTTTTTTTTGTTCTT
204373 20/22 AAAAAAAAAAAAAAAAAAAACG
205577 18/20 TTTTTTCTTCTTTTTTTTTT
205832 26/28 TTTTTTCTTTTTTTTGTTTTTTTTTTTT
208488 29/32 AAAAAAAAAAAAACAAAAAACAAAAAAAAAAC
213706 20/22 AAAAAAAAAGAAAAAGAAAAAA
214845 18/20 TTTTTTTTTTTTTTTGTATT
215314 18/20 GGGGGGGGGGGGGGGGGTTG
217221 20/22 AAAAAAAAAACGAAAAAAAAAA
224157 18/20 AAAAAAAAAAAAAAAAAATT
227067 25/27 TTTTTTTTTTTTTTTTTTTTTTTTTGG
227149 27/30 AAAAAAAAAAAAAAAAAAAAAAAAAAATCT
227593 24/26 TTTTTTTTTTTTTTTTTTTTTTTTGG
233283 22/24 TTTTTTTTTTTTTTTTTTTTTTAC
236567 21/23 AAAAAAAAAAAAAAAAACCAAAA
236829 20/22 TTTTTTTTTTTTTTTGTTTTAT
247428 23/25 AAAAAAAAAAAAAAAGAAAAACAAA
248087 18/20 AAAAACAAAAACAAAAAAAA
249294 22/24 TTTTTTTTTTTTTAGTTTTTTTTT
251532 25/27 AAAAACAAAACAAAAAAAAAAAAAAAA
266260 18/20 AAAAAAAAAAAAAAAAACGA
269612 21/23 TTTTTTTTTTTTTTTTTTGTATT
269966 23/25 AAAAAAAAAAAAAAATAAAATAAAA
271969 18/20 AAAAAAAAAAAACGAAAAAA
277484 39/43 AAAAAAAAAAAAAAGAAAACAAAAAAAAAAAAACAAAAAACAA
278469 18/20 AAAAAAAAAAAAAAAGAAAT
279371 19/21 TTTTTTTTTTTTTTTTTTTAG
279919 22/24 AAAAAAAAAAAAAAAAAAAAGAGA
280617 20/22 AAAAATAAGAAAAAAAAAAAAA
281128 20/22 GGGGGGGGGGGGGGGGGGCAGG
285172 23/25 AAAAAAAAAAAAAAAATCAAAAAAA
285792 22/24 AAAAAAAAAACAAAAAGAAAAAAA
293209 20/22 AAAAAAAAAAAAAAGTAAAAAA
295733 25/27 AAAAAAAAAAAAAAAAAAAAAAAATAG
296580 22/24 AAAAAAAAAAAAAAAGAAAACAAA
296730 24/26 AAAAAAAAAAAAAAAAAAAAAAATAG
297275 24/26 AAAAAAAAAAAAAAAAAAAAAAAAGT
300260 18/20 TTTTTTTTTTCCTTTTTTTT
302992 20/22 TTTTTTTTTTTTTTTTTTATGT
303258 18/20 TTTTTATTTTTTTTTTTATT
304135 19/21 TTTTTTTTTTTTTTTTTTTGG
----------------------------------------------------------------------------
Total sequence length......................... 310909
Total number of repeats detected.............. 141
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 66 61 2 0
30 to 39 9 2 0 0
40 to 49 1 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 76 63 2 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290382|gb|AE003426.1|AE003426 Drosophila melanogaster genomic scaffold 142000013386054 section 10 of 35, complete sequence
Position Repeat-length Repeat
9369 20/22 TTTTTTTTTTTTTTTTTTTTCA
10691 20/22 AAAAAAAAAAAAAAACATAAAA
15656 21/23 TTTTTTTTTTTTTTTTTTCTTGT
19444 23/25 AAAAAAAAAAAAAAAAAAAAATAAT
21421 21/23 AAAAAAAAAAAAAACAAAATAAA
21883 32/35 AAAAAAAAAAAAAAAAAAAAAAAATGAAAAAAAAC
23654 18/20 TTTTTATTTTTTTTTTTTGT
27751 19/21 CCCCCAACCCCCCCCCCCCCC
28555 20/22 AAAAAAAAAAAACAAAAAAAAT
31508 18/20 AAAAAACAAAAAAAAAAAGA
34433 21/23 AAAAAAATAAAAAAAAAAAAAGA
43781 18/20 TTTTTTTTTTTTTTTTTTGG
46551 22/24 TTTTTTTTTTTTTTTTTTTTTTGA
50772 28/31 TTTTTATTTTTTTTTTTTTTTTTGTTTTTTG
51870 20/22 TTTTTCTTCTTTTTTTTTTTTT
52010 18/20 TTTTTTTATTTTTTTTTTTG
52390 19/21 AAAAAAAAAAATAACAAAAAA
54213 25/27 AAAAAACAAAAAAAAAAAAAAAAAAAG
57758 29/32 TTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGA
59141 33/36 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTA
60220 18/20 TTTTTTTTTTTTTTTTTATC
62225 42/46 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCTC
73531 18/20 TTTTTTATTTTTTTTTTTTA
79220 22/24 TTTTTTTTTCTTTTTTTTTTTTGT
80564 19/21 TTTTTTTTTTTTTTGGTTTTT
80943 21/23 TTTTTTTTTGTTTTTTTGTTTTT
83703 18/20 TTTTTTTTATTTTTTTTTCT
87142 21/23 TTTTTTGTTTTTTTTTTTTTTTG
87383 24/26 TTTTTTCTTTTTTTGTTTTTTTTTTT
90491 22/24 TTTTTTTTTTTTTTTTTTTTGTAT
95709 18/20 AAAAAAAAAAAGAAAACAAA
111300 30/33 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCT
112614 21/23 TTTTTTTTTTTTTTTTTGTTTTG
117968 22/24 AAAAAAAAAAAAGAAAAAAAAAAC
140804 18/20 CCCCCCCCCCCCCCCGCCTC
141914 21/23 AAAAAAAAAAAAAAAAAAAAATT
144688 21/23 AAAAAAAAAACAAAAATAAAAAA
156218 24/26 TTTTTTTTTTTTTTTTTTTTTTTTGA
156836 23/25 AAAAAAAAAAAAAAAAAATTAAAAA
157525 19/21 TTTTTTTTTTATATTTTTTTT
158631 20/22 AAAAAAAAAAAAAAAAAAATAC
160384 18/20 TTTTTTCTTTTTTTTTTTTG
163019 23/25 AAAAAAAAAAAAAAAAAAAAAATAT
165156 19/21 AAAAAAAAAAAAAAATAATAA
165816 28/31 AAAAAAAAAAAAAACAAAGAAAAAAAAAAAT
166277 23/25 AAAAAAAAAAAAAATAAAAAAATAA
167084 30/33 AAAAAATACAAAAAAAAAAAAAAAAAAAAAATA
167757 18/20 TTTTTTTTTTTTAATTTTTT
170914 20/22 AAAAAAAAAAAAAAAGGAAAAA
172334 18/20 AAAAAAAAAAGAAAAAATAA
174069 29/32 TTTTTTTCTTTTTTATTTTTTTTTTTTTTTTG
174995 25/27 TTTTTTTTTTTTTTTTTTTTTTTTGTG
176051 22/24 TTTTTTTTTTTTTTTTTTTTTTGG
179089 19/21 TTTTTTGTTTTTTTTTGTTTT
179448 21/23 TTTTTTTTTTCATTTTTTTTTTT
179598 18/20 TTTTTTTTTTTTTTTTGTTG
180113 22/24 TTTTTTTGTTTTTTTTTTTTTTTG
180519 21/23 AAAAAACAAAAAAAAAAGAAAAA
181287 23/25 AAAAAAAAAAAAATAAAAAAAAATA
182209 23/25 TTTTTTTTTTTTTTTTATTTTTGTT
184055 22/24 AAAAAAAAACAAAAAAAAATAAAA
186906 22/24 TTTTTTTTTGTTTTTTTTTTTTTG
187256 23/25 AAAAAAAAATAAAAAAAAAAGAAAA
187472 18/20 AAAAAAAAAAAAAAAAAATT
187931 23/25 AAAAACAAAAAAAAAAAAAAAAAAC
194495 24/26 AAAAAACAAAAAAAAAAACAAAAAAA
196652 21/23 AAAAAAAAAACCAAAAAAAAAAA
198229 21/23 AAAAAAAAAAATAAAAAAGAAAA
199096 20/22 TTTTTAGTTTTTTTTTTTTTTT
203963 22/24 TTTTTTTTATGTTTTTTTTTTTTT
204045 21/23 TTTTTTTTTTTTTTTTTGTGTTT
204234 18/20 AAAAAAAGAAAAAAAAAATA
204829 24/26 AAAAAAAAAAAAAAAAAAAAAACCAA
205268 20/22 TTTTTTTTCTTTCTTTTTTTTT
206055 26/28 TTTTTTTTTTTTTTTTTTTTTTTGTATT
207673 23/25 TTTTTTTTTTTTTAATTTTTTTTTT
207911 24/26 AAAAAAAAAAAAAACACAAAAAAAAA
208052 20/22 TTTTTTTTTTTTTTTTTTATAT
208314 25/27 AAAAAAAAAAAAAAAACAGAAAAAAAA
210399 21/23 TTTTTTTTTTTTTTTTTTTGTAT
216746 19/21 TTTTTTCTTTTTTTTTTGTTT
217858 22/24 TTTTTTTTTTTTTTTTTGTTTTGT
219328 19/21 TTTTTTTATTTTATTTTTTTT
219553 18/20 TTTTTTTTTTTCTTTATTTT
220006 24/26 TTTTTTTTTTTAATTTTTTTTTTTTT
221116 19/21 AAAAAATATAAAAAAAAAAAA
230445 21/23 AAAAAAAAAAACAAAAAACAAAA
232343 19/21 TTTTTTTTTGCTTTTTTTTTT
234271 23/25 AAAAAAAAAAAAAAAGAAAACAAAA
246275 18/20 TTTTTTTTTTTTTTTTGTAT
247997 18/20 TTTTTTTTTAATTTTTTTTT
248752 23/25 AAAAAAAAAAAAAAAAACAAAAAAC
249506 19/21 AAAAATAAAAAAAAAAACAAA
251151 20/22 TTTTTTTTTTTTTTTTCTTTTG
256298 22/24 AAAAAAAAAAAAAAGAAAAAAAAT
263058 22/24 AAAAAAAAAAAAAAAAAACACAAA
264402 23/25 AAAAAAAGAAGAAAAAAAAAAAAAA
266605 20/22 TTTTTTTTTTTTTTTTCTTTTG
267742 19/21 AAAAAAAAAAAAAAAGAAAAT
267954 18/20 TTTTTTTTTTTTTTTTGTAT
269876 18/20 TTTTTTTTTTTTTTTTTTAG
269986 25/27 AAAAAGAAAAACAAAAAAAAAAAAAAA
274612 20/22 AAAAACCAAAAAAAAAAAAAAA
287030 19/21 AAAAAAAAAAAAAAAAACGAA
289734 23/25 AAAAAAAAAACAGAAAAAAAAAAAA
292593 26/28 AAAAAAAGAAAAAAAGAAAAAAAAAAAA
294725 18/20 TTTTTTTTTTTTTTTATTTC
296455 18/20 TTTTTTTTTTTTTATATTTT
----------------------------------------------------------------------------
Total sequence length......................... 300193
Total number of repeats detected.............. 108
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 46 51 0 2
30 to 39 4 4 0 0
40 to 49 1 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 51 55 0 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290341|gb|AE003425.1|AE003425 Drosophila melanogaster genomic scaffold 142000013386054 section 9 of 35, complete sequence
Position Repeat-length Repeat
1232 18/20 AAAAAAAAAAAAAAACGAAA
5768 20/22 CCCCCCCCCCCCTCCCCTCCCC
7354 19/21 AAAAAATAAAAACAAAAAAAA
7609 25/27 TTTTTTTTTTTTTTTTTTTTTGTTATT
11114 20/22 CCCCCCCCCCCCCCCCCCTCAC
20901 18/20 GGGGGGGGGGGGGGGTGAGG
21549 18/20 AAAAAAAAAAAAAAAAAAGG
22125 23/25 AAAAAAAAATAAAAATAAAAAAAAA
30348 19/21 AAAAAACAAAAAAAAAAAAAG
31097 18/20 AAAAAAAAAAAAAAGAACAA
37568 24/26 AAAAAAAAAAAAAAAAAAAAAACTAA
66397 22/24 AAAAAATAAAAAAAAAAAAACAAA
95785 18/20 TTTTTTTTTTCATTTTTTTT
101049 20/22 AAAAAGAAAAAAACAAAAAAAA
118381 18/20 TTTTTTTTTTTTTTTGTTTG
118450 19/21 GGGGGAGGGGGAGGGGGGGGG
129024 18/20 CCCCCCCCCCCCCCTCCCCT
132011 23/25 AAAAAAAAAAAAAAAAAAAAAGAAC
134939 19/21 GGGGGGGGGGGGGGGGAGGTG
136478 18/20 TTTTTTTTTGTTTTTGTTTT
154835 25/27 TTTTTTTGTTTTTTTTTTTTTTGTTTT
160709 22/24 TTTTTTTTATTTTATTTTTTTTTT
161208 19/21 TTTTTTTTTTTTTGTGTTTTT
161613 21/23 TTTTTTTTTTTTTTTTTTTTGTG
163628 19/21 AAAAAAAAAAAAAAAAGAAAG
166907 18/20 TTTTTTTTTTTTTTTTTTGG
175256 23/25 AAAAAAAAAAAAAAAAAAAAAAGTA
188318 24/26 TTTTTTTTTTTTTTTTTTTGGTTTTT
188768 22/24 AAAAAAAAAAAAAAAAATGAAAAA
189438 22/24 TTTTTCTTATTTTTTTTTTTTTTT
199258 20/22 TTTTTTTTTTTTTTTTTTTTGG
205815 21/23 TTTTTTTTTTTTTTTTTTTTTAA
206074 23/25 TTTTTATTTTTTTTTTTTTTGTTTT
212085 21/23 TTTTTTTTTTTTTTTTTTTTGTG
218942 21/23 TTTTTTTTATTTCTTTTTTTTTT
219939 24/26 AAAAAAAAAAAAAAAGAAAAATAAAA
221261 23/25 AAAAAAAAAAAAAAAAAAAAATGAA
222848 19/21 TTTTTTTTTTTTTTTTTTTGG
223173 19/21 TTTTTATTGTTTTTTTTTTTT
223369 20/22 TTTTTATTTTTATTTTTTTTTT
227023 25/27 AAAAAAAAAAAAAAAAAAAAAAATGAA
227279 21/23 CCCCCCCCCCACCCCCCACCCCC
231615 18/20 TTTTTTTTTTTTGTTTTTTA
239431 21/23 TTTTTTTTTTTTTTTTTTTTGTG
245965 23/25 TTTTTTATTTTTTTTTTTTTTTTCT
249547 22/24 AAAAAAAAACAAAAAAAAAAACAA
255537 21/23 AAAAAAAAAAAAAAAAAGCAAAA
259084 20/22 TTTTTTTAATTTTTTTTTTTTT
262634 18/20 GGGGGGAGGAGGGGGGGGGG
270955 19/21 TTTTTTTTTGTTTTTTTGTTT
271881 18/20 CCCCCCCCCCCCCCCCCCTG
275005 19/21 AAAAATAAAATAAAAAAAAAA
275915 19/21 TTTTTTTTTTTTTTTTTTGTA
276495 18/20 TTTTTTTTTTTTTTTTATAT
276957 21/23 TTTTTTTTTTTTTTGTTTTTTTC
277143 20/22 AAAAAAAAAAAACAAGAAAAAA
294409 21/23 AAAAAAAAAAAAAAAAAACAAGA
298582 23/25 TTTTTTTTTTTTTTTTTTGATTTTT
----------------------------------------------------------------------------
Total sequence length......................... 300205
Total number of repeats detected.............. 58
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 21 28 4 5
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 21 28 4 5
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290316|gb|AE003424.1|AE003424 Drosophila melanogaster genomic scaffold 142000013386054 section 8 of 35, complete sequence
Position Repeat-length Repeat
3581 25/27 AAAAACAAAAAAAAAAAAAAAAAAAAC
8815 18/20 TTTTTTTTTTTTTGTTTTTG
16765 20/22 TTTTTTGTATTTTTTTTTTTTT
101865 19/21 TTTTTTTTGTTTTTTTTTTAT
105352 18/20 CCCCCCTCCCCCCCCTCCCC
110232 26/28 AAAAAAAAAAAAAAAAAAAAAAATACAA
111875 19/21 AAAAAAAAAACAAAAAAAAAC
120971 31/34 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAA
129365 24/26 TTTTTTTTTTATTTTTTTTTATTTTT
129664 20/22 TTTTTTTTTTTTTTTTTTTTAA
140665 19/21 TTTTTTTTTTTTTTTTTGTTG
146127 19/21 TTTTTTTTGTTTTTTTTTTTG
147030 19/21 AAAAAAAGGAAAAAAAAAAAA
150362 20/22 AAAAAAAAAAAAACAAAAAAAG
154465 18/20 AAAAAAAAAAAAATAAAATA
156646 18/20 TTTTTTTTTTTTTGTTTTAT
163109 20/22 TTTTTTTTTTTTTTTTTTTGGT
175778 20/22 TTTTTTTTTTTTTTTTGTTATT
179576 21/23 GGGGGCGGGGGGGGGGGGGGGTG
180447 20/22 TTTTTTTGGTTTTTTTTTTTTT
183673 23/25 AAAAAAAAAAAAAAAAAAAAAATAN
185431 20/22 AAAAAAAAAAAAAAAAAAACAT
185878 23/25 TTTTTTTTTTTTTTTTTTTCTTATT
190314 23/25 AAAAAACAAAAAAAAAAAAAAAATA
191327 18/20 TTTTTTTTTTTTTTGTGTTT
197417 19/21 AAAAAAATAACAAAAAAAAAA
197508 20/22 AAAAAAAAAAGAAAAGAAAAAA
197621 24/26 AAAAAAAAAAAAAAAAAACAAAAAGA
199446 19/21 TTTTTTTTTTTTTTTTTTCAT
202433 19/21 AAAAAACAAAAAAAAAAAAAC
202910 21/23 TTTTTTTTTTTTTTTTTTTTTGG
209564 22/24 AAAAAAAAAAATAAATAAAAAAAA
210151 22/24 AAAAAAAAAAAAAAAAAAATACAA
213381 25/27 AAAAAAAAAAAAACAAAAAACAAAAAA
216683 19/21 TTTTTTTTTTTTTTTTTGTTG
231086 19/21 AAAAACAAAAAAAAAAAACAA
235497 25/27 AAAAAAAAAACAAAAATAAAAAAAAAA
239447 18/20 AAAAAACAAAAAACAAAAAA
243564 19/21 AAAAAAAAAATAAAAAAAAAT
284523 18/20 GGGGGGGGGGGGGGGGTAGG
285030 25/27 TTTTTTTTTTTTTTTTTTTTTTACTTT
----------------------------------------------------------------------------
Total sequence length......................... 289090
Total number of repeats detected.............. 41
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 20 17 2 1
30 to 39 0 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 20 18 2 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290252|gb|AE003423.1|AE003423 Drosophila melanogaster genomic scaffold 142000013386054 section 7 of 35, complete sequence
Position Repeat-length Repeat
33437 19/21 AAAAAAAAAAAAAAAAAAATG
36433 19/21 AAAAAAAAAATAATAAAAAAA
47902 25/27 AAAAAAAAAAAAAAACAAAAAAAACAA
126514 19/21 TTTTTTTAGTTTTTTTTTTTT
157940 20/22 TTTTTGTTTTTTTTTTTTTTCT
213963 26/28 TTTTTTTTTTTTTTTTTTTTTTTTGTAT
214393 18/20 TTTTTGTTTTTTTTTTTCTT
217509 18/20 TTTTTTTTTTTTTTTTTCTG
217989 38/42 TTTTTTTTTTTTTTTTTTTTTTTGTCTTTTTTGTTTTTTTGT
219096 18/20 AAAAAAAAAAAAGGAAAAAA
222984 18/20 TTTTTTTTTTTTTTTTTGTA
230394 18/20 GGGGGGGGGGGGGGGGGAAG
251592 20/22 CCCCCCCCCCCCCACCCCCACC
252103 19/21 TTTTTTTTTTGTTTTGTTTTT
254123 18/20 AAAAACAAAAAAAAAAAAAC
254496 19/21 TTTTTTTTTCTTTTTTTTTTG
262190 18/20 TTTTTTTTTTTTTTTTTAAT
263550 20/22 TTTTTTTCTCTTTTTTTTTTTT
264967 18/20 CCCCCACCCCCCCCCCCCCA
265866 20/22 TTTTTTTCTTCTTTTTTTTTTT
270713 19/21 AAAAAAAAAAAAAAAAAACAG
----------------------------------------------------------------------------
Total sequence length......................... 291976
Total number of repeats detected.............. 21
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 6 11 1 2
30 to 39 0 0 0 0
40 to 49 0 1 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 6 12 1 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290202|gb|AE003422.1|AE003422 Drosophila melanogaster genomic scaffold 142000013386054 section 6 of 35, complete sequence
Position Repeat-length Repeat
14279 29/32 TTTTTTTTTTTTTTTTTTTTTTTCCTTTTATT
35138 18/20 AAAAAAAAAAAAAAAAAGCA
51901 18/20 AAAAAAAAAAAAAAGTAAAA
66257 19/21 AAAAAATACAAAAAAAAAAAA
96398 19/21 TTTTTTTTTTTTTTTTTTGCT
176737 30/33 AAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAGA
205514 28/31 AAAAAAAAAAAAAAAAAAAAAACAAAAAACT
206933 19/21 AAAAAAAGAAAAAAAAAAACA
212144 21/23 TTTTTTTTTTTTAATTTTTTTTT
224418 19/21 TTTTTTTTTTTTTTTTTTTAG
226869 25/27 AAAAAAAAAACAAAAAAAAATAAAAAA
239252 18/20 TTTTTTTTTTTTGTGTTTTT
----------------------------------------------------------------------------
Total sequence length......................... 300739
Total number of repeats detected.............. 12
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 5 4 0 0
30 to 39 2 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 7 5 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290163|gb|AE003421.1|AE003421 Drosophila melanogaster genomic scaffold 142000013386054 section 5 of 35, complete sequence
Position Repeat-length Repeat
57445 42/46 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNN
66213 20/22 CCCCCCCCCCCCCCCCACCACC
76397 27/30 TTTTTTTTTTTTTTTTTTTTTTTTTTTGAG
85182 19/21 CCCCCCCCCCCCCACCCCCCT
104761 19/21 AAAAAAAAAAAAAACGAAAAA
106276 21/23 AAAAAAAAAAAAGAAAAAAGAAA
111496 34/37 TTTTTTTTGGTTTTTTTTTTTTTTTTTTTTTTTTGTT
118945 26/28 AAAAAAAAAAAAAAAAAAAAAAAAAATC
126012 20/22 AAAAAAAAAAAAAAAAAATGAA
131499 20/22 AAAAAAAGAAAAAAAAACAAAA
137546 23/25 AAAAAAAAAAAAAAAAAAAAACAGA
146560 34/37 TTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTGTTT
150455 18/20 AAAAAAAAATAATAAAAAAA
168814 18/20 AAAAAAAAAAAAAAAAATGA
169515 18/20 AAAAAAAAAAAAAAAAACAT
184303 18/20 AAAAACAAAAAACAAAAAAA
192783 23/25 AAAAAAAAAAAAACAAAAAGAAAAA
193053 20/22 AAAAAAAAAAAAATAAAATAAA
211196 18/20 TTTTTGGTTTTTTTTTTTTT
294045 18/20 TTTTTTTTTTTTATTTTTTA
----------------------------------------------------------------------------
Total sequence length......................... 296497
Total number of repeats detected.............. 20
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 12 2 0 2
30 to 39 0 3 0 0
40 to 49 0 1 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 12 6 0 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290119|gb|AE003420.1|AE003420 Drosophila melanogaster genomic scaffold 142000013386054 section 4 of 35, complete sequence
Position Repeat-length Repeat
21529 22/24 AAAAAAAAAAAAAAAAACACAAAA
36774 20/22 TTTTTTTTTTTTTTTTTCGTTT
69829 21/23 TTTTTTTTTTTTTTTTTTTTTGC
76885 20/22 TTTTTTTTTTTTTTTTTTTTAA
92758 18/20 AAAAAAAAAAAAACAAAAAT
99246 32/35 TTTTTTTTTTTTGTTTTTTTTTTTTTTTTTGTTTG
108543 21/23 AAAAAAAAAAAAAAAAAAAAACC
112094 19/21 AAAAAAAAAAATAAAATAAAA
168022 22/24 TTTTTTTTTTTTTTTTTTTGTTTA
208803 33/36 TTTTTTTTTTTTTTTTTTTTTTATTTATTGTTTTTT
258698 22/24 AAAAAAAAACTAAAAAAAAAAAAA
293483 21/23 AAAAAAAAAACCAAAAAAAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 302855
Total number of repeats detected.............. 12
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 6 4 0 0
30 to 39 0 2 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 6 6 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290091|gb|AE003419.1|AE003419 Drosophila melanogaster genomic scaffold 142000013386054 section 3 of 35, complete sequence
Position Repeat-length Repeat
1769 18/20 AAAAACAAAAAAAAAAAACA
21066 19/21 CCCCCCCCCCCCCCCCCCACG
24500 25/27 AAAAAAAAAAAAAAAAAAATTAAAAAA
42930 23/25 AAAAAAAAAAAAAATAAAAAATAAA
52889 18/20 GGGGGAGGGGGGGGGGGGGA
91887 18/20 AAAAAAAAAAAATGAAAAAA
103310 22/24 AAAAACAAAAAAAAAACAAAAAAA
110604 21/23 AAAAAAAAAAAAAAAAATAACAA
118200 22/24 AAAAAAAAAAAAAAAAAAAAACAG
126232 18/20 TTTTTTTTTTTTTTTATTTG
144607 19/21 AAAAAGCAAAAAAAAAAAAAA
159300 21/23 AAAAAAAAAAAAAAAAAGAAAGA
204789 22/24 CCCCCCTCCCCCCCCCCCCCCCCG
245213 20/22 TTTTTTTTTTGTTTTGTTTTTT
249538 19/21 TTTTTTTTTTTTTTTTTGGTT
252276 26/28 AAAAAAAAAAAAAAAACAAAAAAAAAAT
253576 19/21 TTTTTTGTTTTTTTTTTTTTG
256562 20/22 TTTTTGTTTTTTTTTTTTTTTA
261882 24/26 TTTTTTGTTTTTTTTTTGTTTTTTTT
265666 19/21 CCCCCCCCCCCCCCCCTCACC
267920 30/33 TTTTTTTTTTTTTTTTTTTTTTTTGTGTTTCTT
273785 18/20 AAAAAAAAAAAAAACGAAAA
290672 22/24 TTTTTTTTTTTTTTTTTTTTTGGT
297768 20/22 GGGGGGCGGGGGGGGGGGGAGG
----------------------------------------------------------------------------
Total sequence length......................... 299275
Total number of repeats detected.............. 24
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 11 7 2 3
30 to 39 0 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 11 8 2 3
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290053|gb|AE003418.1|AE003418 Drosophila melanogaster genomic scaffold 142000013386054 section 2 of 35, complete sequence
Position Repeat-length Repeat
17027 24/26 AAAAAAAAAAAAAAAAAAAAAAATAC
27628 18/20 AAAAAAAAACAACAAAAAAA
47190 20/22 TTTTTTTTATTTTTTTTTTTTA
78458 18/20 AAAAAAAAAAAAAAAAAAGG
139726 19/21 AAAAAGAAAAAAAAAAAAAAC
139836 19/21 AAAAAAAATGAAAAAAAAAAA
161745 25/27 TTTTTTTTTTTTTTTTTTTTTTTGTGT
178492 32/35 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTC
225100 20/22 TTTTTTTTTTTTTTGTATTTTT
241904 25/27 TTTTTTTTTTTTTTTTTTTTTTTGTTA
256478 18/20 AAAAAAAAAAAAAAAAATTA
276296 24/26 AAAAACAAACAAAAAAAAAAAAAAAA
281423 18/20 AAAAAAAAAAAAAAAAATCA
----------------------------------------------------------------------------
Total sequence length......................... 299970
Total number of repeats detected.............. 13
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 8 4 0 0
30 to 39 1 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 9 4 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290018|gb|AE003417.1|AE003417 Drosophila melanogaster genomic scaffold 142000013386054 section 1 of 35, complete sequence
Position Repeat-length Repeat
37040 19/21 AAAAAATAAAAAACAAAAAAA
92355 18/20 TTTTTTTTTTTTTCATTTTT
94047 20/22 AAAAAAAAAAAAAGAAAAAATA
97152 20/22 TTTTTTGTTTTTTTTTTTTGTT
100965 20/22 TTTTTGGTTTTTTTTTTTTTTT
110318 19/21 AAAAAAAAAAAAACACAAAAA
157302 19/21 TTTTTTTGTTGTTTTTTTTTT
164063 25/27 TTTTTTTTTTTTTTTTTTTTTTGCTTT
167689 20/22 AAAAAAAAAAAAAAAAAAAACG
176073 22/24 AAAAAAAAAAAAAAAAAAAAAACT
219921 20/22 AAAAACCAAAAAAAAAAAAAAA
233489 18/20 TTTTTTTTTTTAATTTTTTT
254850 19/21 AAAAAAAAAAAAAAAAAACAT
----------------------------------------------------------------------------
Total sequence length......................... 314661
Total number of repeats detected.............. 13
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 7 6 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 7 6 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289092|gb|AE002987.1|AE002987 Drosophila melanogaster genomic scaffold 142000013385379, complete sequence
Position Repeat-length Repeat
56420 23/25 TTTTTTTTTTTTTTTTTTTTTTTGC
----------------------------------------------------------------------------
Total sequence length......................... 71090
Total number of repeats detected.............. 1
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 0 1 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 0 1 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289791|gb|AE002991.1|AE002991 Drosophila melanogaster genomic scaffold 142000013385979, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 7017
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7316106|gb|AE002593.1|AE002593 Drosophila melanogaster genomic scaffold 142000013386053, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 0
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7293636|gb|AE003513.1|AE003513 Drosophila melanogaster genomic scaffold 142000013386053 section 30 of 30, complete sequence
Position Repeat-length Repeat
30452 18/20 AAAAAAAAAAAAAAAATAGA
51724 18/20 TTTTTTTTTTTTAATTTTTT
66248 18/20 TTTTTTTTTTCCTTTTTTTT
68970 26/28 AAAAAAAAACCAAAAAAAAAAAAAAAAA
70500 22/24 TTTTTTGTTTTTTTTTTTTTTTTA
77626 23/25 AAAAAAAAAAATACAAAAAAAAAAA
85722 19/21 TTTTTTTTTTTTTTTTTTGCT
98466 19/21 TTTTTTTTTTTTTTTGTTTTG
103725 19/21 TTTTTTTTTTTTTTTCTATTT
107067 33/36 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTG
109601 18/20 TTTTTTTTTCTCTTTTTTTT
111758 23/25 AAAAAAAAAAAAAAAAAAATGAAAA
119325 22/24 AAAAAAAAAAAAAATAAAAGAAAA
125072 21/23 TTTTTTTTTTTTTTTTTTATTCT
125328 19/21 AAAAAAAAAAGAAAAAAAAAG
140375 24/26 TTTTTTTTTTTTTTTTTTTTTTTTGG
141448 22/24 AAAAAAAAAAAAAAAAAAACGAAA
145099 18/20 TTTTTTTTTTTTTTTTTTGA
151773 18/20 TTTTTTTTTTTTTTTTTTGG
154389 23/25 AAAAAAAAAAAAATAAAAAAATAAA
162665 18/20 TTTTTTTAATTTTTTTTTTT
192923 19/21 CCCCCCCCCCCCCCCATCCCC
193826 19/21 TTTTTTTTTTCTTTTTTTTTG
195328 19/21 TTTTTTTTCTTCTTTTTTTTT
197734 22/24 AAAAAAAAAAAAAACAAAAAAAAC
----------------------------------------------------------------------------
Total sequence length......................... 207355
Total number of repeats detected.............. 25
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 9 14 0 1
30 to 39 1 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 10 14 0 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7293579|gb|AE003512.1|AE003512 Drosophila melanogaster genomic scaffold 142000013386053 section 29 of 30, complete sequence
Position Repeat-length Repeat
1155 18/20 AAAAAAAAACAAAAAAAAGA
12750 19/21 AAAAACAAAACAAAAAAAAAA
19010 19/21 AAAAAAAAAAAAAAAAAAACT
20456 18/20 AAAAAAAAAAAAAAAATATA
25849 33/36 AAAAAAAAAAAAAAAAGAAAAAAACAAAAAAAAAGA
29611 21/23 TTTTTGTTTTTTTTTTTTTTTGT
33001 19/21 TTTTTTTGTTTTTTTTTTTTG
36830 20/22 CCCCCCCCCCCCCCCCACACCC
46891 21/23 AAAAAAAAAAAAAAGAAAGAAAA
48519 26/28 TTTTTTTTTTTTTTTTGTTTTGTTTTTT
48769 19/21 AAAAAAAAAAAAAAAAGGAAA
50049 19/21 TTTTTTTTTTTCTTGTTTTTT
50226 22/24 AAAAAAAAAAAAAAAAAAAAAAGG
51577 24/26 GGGGGGTGGGGGGGGGGGGGGGGTGG
57254 20/22 TTTTTTTTTTTTTTTTTTTGTA
57351 18/20 CCCCCCCCCCCCTCCCCTCC
60078 24/26 AAAAAAAAAAAAAAGAAAAATAAAAA
62483 19/21 AAAAAAAAAAAAATAAAAAAT
63754 19/21 AAAAAAAAAACCAAAAAAAAA
71927 25/27 AAAAAAGAAAAAAAAAAAAAAAACAAA
73490 18/20 TTTTTTATTTTTTTTTTTGT
102536 18/20 TTTTTTTTCGTTTTTTTTTT
120015 18/20 TTTTTTTTTTTTTTTCTTGT
121036 19/21 TTTTTTTTTTTTTTTTGGTTT
130235 19/21 TTTTTTTTGTTTTTTTTTTTA
134704 25/27 AAAAAAAAAAAAAAAAAAGAAAAAACA
136910 18/20 TTTTTTCTTTTTTTTTTTTC
151660 18/20 AAAAAACATAAAAAAAAAAA
153860 19/21 AAAAATAAAAAAAAAAAAATA
154445 19/21 AAAAATAAAGAAAAAAAAAAA
159572 18/20 CCCCCCCCCCCCCCCTTCCC
162256 18/20 GGGGGGGGGGGGGGGGTGGT
170614 19/21 AAAAAAAAAAAACAAAAAAAT
201066 21/23 TTTTTTTTTTTTGTTTTGTTTTT
205635 18/20 AAAAAAAAAAAACAAAAGAA
219780 20/22 TTTTTTTTTTTTTTTTGTTTTG
264531 18/20 AAAAAAAAAAAAAAAAAATG
270414 23/25 AAAAAAAAAAAAAAGAAAACAAAAA
281818 20/22 AAAAAAAAAAAAAAAACAATAA
289339 27/30 AAAAAAAAAAAAAAAAAAAAAAAAACAACT
----------------------------------------------------------------------------
Total sequence length......................... 301656
Total number of repeats detected.............. 40
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 20 13 2 3
30 to 39 2 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 22 13 2 3
----------------------------------------------------------------------------
Genomic Sequence:
gi|7293536|gb|AE003511.1|AE003511 Drosophila melanogaster genomic scaffold 142000013386053 section 28 of 30, complete sequence
Position Repeat-length Repeat
5287 40/44 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTTTATTATTT
17692 22/24 TTTTTTTCTTTTTTTTTTTTTTTG
19019 21/23 TTTTTTTTTTTTTTTTTGTTTGT
36096 18/20 TTTTTTTTTTTTTTTTAATT
39305 18/20 GGGGGGGGGGGGGAGGGGGT
47398 24/26 TTTTTTTTTTTTTTTTTTTTTTTTGG
62583 21/23 AAAAAAAAAAACAAAAAAAAAAG
93688 21/23 TTTTTTTTTTTTTTTTTTGTTCT
94826 21/23 AAAAAAAAAAAAAAAAAAAAAGG
117149 21/23 AAAAAAAAAAAAAAAAACAAAAC
117767 20/22 GGGGGGGGGGGGGGGGCGGAGG
130693 19/21 AAAAACAAAAACAAAAAAAAA
142512 20/22 AAAAAAAAACAAAAAAAAAACA
162257 19/21 TTTTTTTTTTTTCTTTTTTTG
181297 20/22 TTTTTTGCTTTTTTTTTTTTTT
217498 19/21 TTTTTTTCTTTTTTTTTTTTG
238335 22/24 AAAAAAAAAAAAAAAAAAAACAAG
239655 23/25 TTTTTTTTTTTTTTTTTTTGCTTTT
250016 21/23 TTTTTTTTTTCTTTTTTTTGTTT
252331 20/22 CCCCCCCTCCCCCCCCCCTCCC
253753 21/23 TTTTTTTTTTTTTGTTTTTCTTT
260232 27/30 TTTTTTCTTTTTTTTGTTTTTTTTTTTTTG
273023 23/25 AAAAAAAACCAAAAAAAAAAAAAAA
274176 18/20 TTTTTTTTTTTTTTGTTTGT
274991 21/23 TTTTTTTTTTGTTTTCTTTTTTT
277402 25/27 TTTTTTTTTTTTTTTTTTTTTTTTTAA
277819 26/28 TTTTTTTTTGGTTTTTTTTTTTTTTTTT
279969 34/37 TTTTTTTTTTTTTGTTTCTTTTTTTTTTTGTTTTTTT
287629 22/24 TTTTTTTTTTGTTTTTTTTTTTTG
293043 21/23 TTTTTTTTTTTTTTTGTTTCTTT
305273 25/27 AAAAAAAAGAAAAATAAAAAAAAAAAA
309543 19/21 AAAAAAAAAAAAAATAAAAAC
310959 19/21 AAAAAAACAAACAAAAAAAAA
313700 21/23 TTTTTATTTTTATTTTTTTTTTT
317479 30/33 AAAAAAAAAAAAAAAAAAAAAAAAACCAAAACA
322612 18/20 GGGGGGGGGGGGGATGGGGG
325353 19/21 TTTTTTTTTTCTTTTTTTCTT
328968 23/25 AAAAAAAAAAAAAAAAAAAGGAAAA
330738 19/21 AAAAAAAAAATAAAAATAAAA
333205 25/27 TTTTTTTTTTTTTTTTTTTTTTTGTTC
338958 25/27 AAAAAAAAAAAAGAAAAAAAAAAAGAA
339337 36/40 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGG
342362 23/25 TTTTTTTTTTTTTTTTTGTATTTTT
343310 22/24 TTTTTTTTTTATTTTTTTTTTTAT
----------------------------------------------------------------------------
Total sequence length......................... 343711
Total number of repeats detected.............. 44
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 13 22 3 1
30 to 39 1 2 0 0
40 to 49 0 2 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 14 26 3 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7293504|gb|AE003510.1|AE003510 Drosophila melanogaster genomic scaffold 142000013386053 section 27 of 30, complete sequence
Position Repeat-length Repeat
6717 22/24 TTTTTTTTTTTTTTTTTTTTTCTG
7276 20/22 GGGGGGGGGGGGGGGGGGTAGG
13262 20/22 AAAAAAAAAAAAAAAAAACAGA
14358 26/28 AAAAAAAAAAAAAAAAAAAAAAAAAGGA
42095 20/22 AAAAAAAAAAAAAAAAGAAAAC
66224 18/20 TTTTTTTTTTTATTTTGTTT
77192 22/24 TTTTTTTTTTTTTTTTTTTAATTT
81079 18/20 TTTTTTTTTTTTTTTTTGCT
105399 21/23 TTTTTTGTTTTTTTTTTTGTTTT
125273 18/20 AAAAAAAAAAAAGAAAACAA
138345 18/20 AAAAAAAAAAAAAAAACACA
155979 18/20 TTTTTTTCCTTTTTTTTTTT
161812 20/22 AAAAAAAAAAAAAACATAAAAA
169112 25/27 AAAAAAAAAAAAAAAACAAAAAAAAAC
170073 18/20 AAAAAAAAAAAAAAAAAACC
177374 23/25 AAAAAACAAAAAAAAAAAAAAAATA
178456 23/25 AAAAAAAAACAAAAAAAAAAAAATA
178864 33/36 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAG
179143 20/22 TTTTTTTCTTTATTTTTTTTTT
183442 20/22 TTTTTTTTTTTTTGTTTTGTTT
185046 18/20 TTTTTTTTTTTTTTTTGTTG
186619 20/22 GGGGGGGGGGGGGAGGGGGGTG
190223 18/20 AAAAAAAAGAAAAAAAAAAT
193595 20/22 AAAAAAAAAAAAAAAACAAAAT
199883 21/23 TTTTTATTTTTTTTTTTTATTTT
200862 30/33 TTTTTTTTTTTTTTTTTTTTTTATATTTTATTT
212805 19/21 TTTTTTTTTTGTTTTTGTTTT
214516 21/23 TTTTTATTTTTTTTTTTTTTATT
214878 22/24 AAAAAAAAAAAAAAAAGAAAAAAG
214943 19/21 TTTTTTGTTTGTTTTTTTTTT
215082 18/20 AAAAAAAAAAAAAAGAAATA
217667 21/23 CCCCCCCCCCCCCCCCCCACCCG
226276 25/27 AAAAATACAAAAAAAAAAAAAAAAAAA
228911 18/20 AAAAAAAAAAAAAAACCAAA
229229 19/21 AAAAAAAAAAAAGAAAAATAA
246541 19/21 AAAAAAAAAAGAAAGAAAAAA
246822 26/28 TTTTTTTTTTTTTTTTTTTTTTTTTGTC
247575 18/20 AAAAAAAAAAAAAGAAAAGA
251494 21/23 AAAAAAAAAAAAAAAAAAACCAA
259569 21/23 TTTTTTTTTTTTCTTTTTTTTTG
259720 21/23 TTTTTTTTTTTTTTTTTTTTTGG
265242 20/22 CCCCCTCCCCCCCCCCCCCCCA
265997 22/24 TTTTTTTTTTCGTTTTTTTTTTTT
281460 19/21 CCCCCCCCCCCCCCCTCACCC
282498 24/26 AAAAAAAAAAACAGAAAAAAAAAAAA
285807 19/21 CCCCCCCCCCCCCCCCCATCC
286636 19/21 AAAAAAAAAAAAAACAAAAAC
288470 20/22 GGGGGGGGGGGGAGGGGTGGGG
----------------------------------------------------------------------------
Total sequence length......................... 298477
Total number of repeats detected.............. 48
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 22 17 3 4
30 to 39 1 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 23 18 3 4
----------------------------------------------------------------------------
Genomic Sequence:
gi|7293467|gb|AE003509.1|AE003509 Drosophila melanogaster genomic scaffold 142000013386053 section 26 of 30, complete sequence
Position Repeat-length Repeat
18680 20/22 AAAAATATAAAAAAAAAAAAAA
20337 25/27 TTTTTTGTTCTTTTTTTTTTTTTTTTT
21597 19/21 AAAAAATACAAAAAAAAAAAA
30749 20/22 AAAAAAAAAAATAAAAAATAAA
39501 18/20 TTTTTATTTTTATTTTTTTT
58005 21/23 AAAAAAAAAAAAAAACAAAAAAT
58432 18/20 GGGGGGGGAGGGGGAGGGGG
58815 19/21 AAAAAAAAACAAAAAAAAAAG
64666 20/22 AAAAAAAAAAAGAAAAAAATAA
81015 25/27 AAAAAAAAAACAAAAAAAAAAAGAAAA
92141 19/21 AAAAAACCAAAAAAAAAAAAA
93562 21/23 CCCCCCCCCCGCCCCCCCTCCCC
98266 22/24 AAAAAAAAAAAAAAAGAAAAAGAA
99903 23/25 TTTTTTTTTTTTTTTTTATTTGTTT
103803 22/24 AAAAAAAAAAAAAAAAAAATGAAA
118840 18/20 AAAAAAAAAAAAAAATAAAC
126496 18/20 AAAAAAAAAAAAAAAACGAA
127577 19/21 TTTTTTTTTGGTTTTTTTTTT
133024 19/21 CCCCCCCCCCCCCCCCCTGCC
165867 31/34 TTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTTGT
167616 18/20 AAAAAAAAAAAAAAAACAAG
169942 28/31 AAAAAAAAAAAAAAAACAAAAAACAAAAAAC
194245 21/23 AAAAAAAAAATAAAAAAAAAACA
214399 18/20 TTTTTTTTTTTTTTTTTTGA
214919 19/21 TTTTTCTTTTTTTTTTTTATT
236196 18/20 TTTTTTTTTTTTTTTGCTTT
239688 19/21 AAAAACCAAAAAAAAAAAAAA
243900 19/21 AAAAAAAAAAAAAAAACAAAT
245283 25/27 AAAAAAAAAAAAAAAAAAAAAAAAATG
248644 19/21 TTTTTTTTTTTTTTGTTTTTG
250556 21/23 TTTTTTTTTTTTTTTTTTATTTC
279468 19/21 GGGGGGGGGGGGGGGGGGGCA
282691 19/21 AAAAAAAGAGAAAAAAAAAAA
285183 18/20 TTTTTTTTTTTTTTATCTTT
295999 23/25 TTTTTTTTTTTTTTTTTTTTTGTAT
301379 23/25 TTTTTTTTCCTTTTTTTTTTTTTTT
----------------------------------------------------------------------------
Total sequence length......................... 303819
Total number of repeats detected.............. 36
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 18 12 2 2
30 to 39 1 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 19 13 2 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7293431|gb|AE003508.1|AE003508 Drosophila melanogaster genomic scaffold 142000013386053 section 25 of 30, complete sequence
Position Repeat-length Repeat
3392 18/20 AAAAAAACAAAAAACAAAAA
6503 20/22 TTTTTTTTTTTTTTTTTTTTGG
10990 18/20 AAAAAAAAAAAAAAAAACAG
12906 21/23 AAAAAAAAAAGAAAAAAAAAAAC
17988 21/23 AAAAAAAAAAAAAAAACAACAAA
22027 20/22 AAAAAAAAAAAAAAAAACCAAA
31152 24/26 TTTTTTTTTTATTTTTTTTTTTTTCT
34246 18/20 AAAAAAAAAACAAAAAAAAT
57117 20/22 AAAAAAAAAAAAAAAAAACACA
65441 21/23 TTTTTTTTTTTTTTTTTTTTTGA
71799 18/20 TTTTTTGTTTTTTTTTTTTC
73908 20/22 AAAAAAAAAATAAAAAAAAAAT
76950 22/24 AAAAAAAAAAGCAAAAAAAAAAAA
97714 21/23 AAAAAAATAAAAAAAAAAGAAAA
98722 29/32 TTTTTTTTTTTTTTTTTTTTTTATTTTTTTGC
100464 20/22 TTTTTTTTTTTTGTTTTTTTTG
107475 18/20 AAAAAAAAAAAAAAAAATCA
112449 22/24 TTTTTTTTTTTTTTATTTTATTTT
118314 19/21 TTTTTTTCTCTTTTTTTTTTT
127200 25/27 TTTTTTTTTTTTTTTTTTTTTTTTGGT
132259 19/21 TTTTTTTTTTTTTTTTTTGAT
140855 18/20 AAAAAAAAAAAAAAAATAAC
144928 20/22 TTTTTTTTTTTTTTTTTGGTTT
146510 18/20 TTTTTTTCTGTTTTTTTTTT
146534 18/20 TTTTTTTTTTTTTTTGTTTA
149774 19/21 AAAAAAAAAGAAAAGAAAAAA
149884 29/32 TTTTTTTTTTTTTTTTTTTTTTGTTATTTTTG
151838 18/20 TTTTTCTTTCTTTTTTTTTT
156179 18/20 TTTTTTTTTTTTTGTCTTTT
184849 19/21 TTTTTTTTTTTTTTTTTTTAA
187352 25/27 AAAAAAAAAAAAAAAATAAAATAAAAA
193063 22/24 TTTTTATTTTTTTTTTTTTTATTT
196034 19/21 TTTTTTCTTTTTTTTTTTTTG
197363 24/26 TTTTTTTTTTTTTTTTTTGTTTTTCT
198599 19/21 AAAAAAAAAAAAGAAAGAAAA
200933 20/22 TTTTTTTTTTTTTTTTTTGTTC
203003 19/21 GGGGGGGGGGGGGGGGTGTGG
211264 19/21 TTTTTTTTTTTTTTTAATTTT
212317 18/20 TTTTTGTTTTTTGTTTTTTT
212899 29/32 TTTTTTTTTATTTATTTTTTTTTTTTTTTTTG
243171 18/20 TTTTTTTTTTTGTTTTTGTT
252263 20/22 AAAAACAAAAAAAAAAAAAAAC
264910 21/23 TTTTTGTTTTTGTTTTTTTTTTT
274970 18/20 TTTTTTTTTTTTTTTTTTGG
----------------------------------------------------------------------------
Total sequence length......................... 300919
Total number of repeats detected.............. 44
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 16 24 1 0
30 to 39 0 3 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 16 27 1 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7293394|gb|AE003507.1|AE003507 Drosophila melanogaster genomic scaffold 142000013386053 section 24 of 30, complete sequence
Position Repeat-length Repeat
15062 19/21 AAAAAAAAAAAAAAAAATAAC
25588 22/24 TTTTTTTTTTTTTTTTTTTTTTGG
52492 19/21 TTTTTTTTATTTTTATTTTTT
59786 19/21 TTTTTTTTTTATTTTTTTTTG
71592 19/21 TTTTTTTTTTTTTTGGTTTTT
73683 18/20 TTTTTTTTTTTTTTTTTGTG
82270 19/21 TTTTTCCTTTTTTTTTTTTTT
83225 21/23 AAAAAAAAAAAAAAAAGAAAAAG
90856 21/23 TTTTTTTTGTTTTTTTTTTTGTT
109510 25/27 AAAAAAAAAAAAAAAAAAAAAAAAATC
115517 18/20 TTTTTTTTAATTTTTTTTTT
119173 19/21 AAAAAAAAACAAAAAAAAAAC
132223 18/20 TTTTTTTTTTTTTTTGGTTT
132304 22/24 AAAAAAAAAAAAAAACAAATAAAA
142534 22/24 AAAAAAAAAAAAACAAGAAAAAAA
149222 20/22 AAAAAAAAAAAACAAAAAAAAT
150761 24/26 TTTTTATTTTATTTTTTTTTTTTTTT
157772 18/20 TTTTTTTTTTTTTTTTTGAT
160340 21/23 AAAAAAAAAAAAAAAAACAAAAC
166033 19/21 TTTTTTTTTTCTTCTTTTTTT
179237 20/22 CCCCCACCCCCCCCCCCCCCGC
191767 18/20 AAAAAAAAAAAATAAATAAA
199828 21/23 TTTTTTTGTTTTTTTTTTTTTTG
254806 20/22 TTTTTGGTTTTTTTTTTTTTTT
272580 18/20 TTTTTTTTTTTTTATATTTT
274957 18/20 AAAAAGTAAAAAAAAAAAAA
275892 20/22 TTTTTTGTTTTTTTTTTTTTGT
276131 21/23 AAAAAAAAAAAAAAAACAAAAAC
278374 19/21 AAAAAAAAAAAAAAACAAAAG
285528 20/22 AAAAACAAAAAACAAAAAAAAA
290251 18/20 AAAAAAAAAAAATACAAAAA
296377 19/21 TTTTTTGTTATTTTTTTTTTT
----------------------------------------------------------------------------
Total sequence length......................... 297165
Total number of repeats detected.............. 32
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 14 17 0 1
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 14 17 0 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7293355|gb|AE003506.1|AE003506 Drosophila melanogaster genomic scaffold 142000013386053 section 23 of 30, complete sequence
Position Repeat-length Repeat
423 19/21 TTTTTTTTTTTAATTTTTTTT
2532 21/23 TTTTTGTTTTTTTTTTTTTGTTT
8516 22/24 AAAAAAAAAAAAACACAAAAAAAA
14613 19/21 TTTTTTTTTTTTATTTTCTTT
22196 18/20 AAAAAAAAAAACAACAAAAA
41388 19/21 TTTTTTTCTTTTTTCTTTTTT
45086 21/23 AAAAAAAAAAAAAAAAGAGAAAA
59058 20/22 TTTTTTTTTTTTTCTTTTTTGT
61353 18/20 AAAAAAAAAAAAACAAAGAA
95212 18/20 TTTTTTGTTTTTTTTTTTTC
109918 25/27 TTTTTTTTTTTTGTTTTATTTTTTTTT
121746 19/21 AAAAAAAAAAAAAACAAAAAT
134289 23/25 TTTTTTTTTTGGTTTTTTTTTTTTT
140695 19/21 AAAAAAAAAAAAGAAAAAAAC
143474 19/21 AAAAAAAAAAAAAATACAAAA
168113 20/22 AAAAAAAAAATAAAAAAAATAA
169626 18/20 TTTTTTATTTTTTTTTTTGT
172651 19/21 AAAAAAAAAAAAAAGAAAATA
173203 29/32 TTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGT
173587 19/21 TTTTTTTTTTTTTTTTTGGTT
179815 19/21 AAAAAAAAAAAATAAAAAGAA
181392 18/20 AAAAAAAAAAAACAGAAAAA
182591 27/30 TTTTTTTTTTTGTTTTTTTTTTTTTTTTGC
183806 20/22 AAAAAAAAAAAACAAAACAAAA
195358 22/24 AAAAAAAAAAAAAAAAAACGAAAA
200484 19/21 TTTTTGTTTATTTTTTTTTTT
227112 18/20 TTTTTTTTTTAATTTTTTTT
230757 19/21 TTTTTTTTTTTTTTTTTGGTT
232343 21/23 AAAAAAAAAAAAAAATAAATAAA
236731 26/28 TTTTTCTTTTTTTCTTTTTTTTTTTTTT
247197 19/21 AAAAAAAAAACGAAAAAAAAA
257701 25/27 TTTTTTTTTATTTTTTTTTTTTTTTTG
260232 18/20 GGGGGAGGGGGGGGGGGGCG
267270 18/20 GGGGGGGGGGGGGGGGTGGT
271163 18/20 TTTTTTTTTGTTTTTGTTTT
271229 20/22 TTTTTTTTTTTGTTTTTTGTTT
282226 19/21 AAAAAAAAAAACAATAAAAAA
287288 21/23 TTTTTTGTTTTTTTTTTTCTTTT
288707 18/20 AAAAAAAAAAAAAAAACAAT
----------------------------------------------------------------------------
Total sequence length......................... 300994
Total number of repeats detected.............. 39
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 17 18 2 0
30 to 39 0 2 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 17 20 2 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7293335|gb|AE003505.1|AE003505 Drosophila melanogaster genomic scaffold 142000013386053 section 22 of 30, complete sequence
Position Repeat-length Repeat
9888 18/20 TTTTTTTCTTTTTTTTGTTT
43977 21/23 TTTTTTTTTTTTTTTTTTTTGTG
53086 20/22 AAAAAAAAAAAAAAAAAAGAAC
59415 19/21 TTTTTTTTTTTTTTTTTGGTT
81504 18/20 AAAAAAAAAAAAAAAAAATT
103569 18/20 TTTTTTCTTTTTTTTTTTGT
104644 22/24 AAAAAAAAAAAACAAAAAACAAAA
114525 19/21 TTTTTGTTTTTTTTTGTTTTT
133540 22/24 TTTTTTTTGTTGTTTTTTTTTTTT
146531 20/22 GGGGGGGGGGGGGGATGGGGGG
149981 18/20 AAAAAAAAAAAAAAAATATA
153583 21/23 TTTTTTTTTTTTTTTGCTTTTTT
172573 21/23 TTTTTTTTTTTTTTTTTTTGCTT
193490 18/20 AAAAAAAAAAAAACAAACAA
194803 23/25 TTTTTTTTTTTTTTTTTTTTTATTA
209060 26/28 TTTTTTTTTTTTTTTTTTTTTTTTTGTC
216773 19/21 TTTTTTTTTTTTTTTTGTATT
219933 20/22 TTTTTTTTTTTTTATTATTTTT
229763 23/25 TTTTTTTTTTTTTTTTTTGTATTTT
236822 24/26 TTTTTTTTTTTTTTTTTTTTCTTTTA
244419 18/20 AAAAAAAAATAAAAGAAAAA
246996 22/24 AAAAAAAAAAAACAAAAAAACAAA
249653 23/25 TTTTTTTCTTTCTTTTTTTTTTTTT
262292 19/21 AAAAAAAAAAAAAAATAAACA
265584 19/21 AAAAAAAAAAAAAAAAAATGA
266666 20/22 AAAAAAAAAAAAAAATAAAACA
268207 20/22 AAAAAAAAAAAAAACATAAAAA
275550 30/33 AAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGG
277618 21/23 AAAAAAAAAAAAAATAATAAAAA
285462 24/26 TTTTTTTTTTTTTTTTTTTTTTTTAA
286092 26/28 AAAAAAAAAAAAAAAATTAAAAAAAAAA
289457 23/25 TTTTTTTTCTTTTTTTTTTTTTTGT
291495 18/20 TTTTTTGTTTTTTTTTTTTG
293792 22/24 TTTTTTTTTTTTTTTTTTTGTCTT
294886 18/20 AAAAAAAGAAAAAATAAAAA
302660 19/21 TTTTTTTATTTTTTTTATTTT
303103 20/22 TTTTTTTTTTGTTTTTTGTTTT
309285 18/20 CCCCCCCCCCCCTCCCCCTC
309449 21/23 CCCCCCCCCCCCCCCCCGCCACC
309574 22/24 TTTTTTTTTTTTTTAATTTTTTTT
----------------------------------------------------------------------------
Total sequence length......................... 314113
Total number of repeats detected.............. 40
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 14 22 1 2
30 to 39 1 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 15 22 1 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7293302|gb|AE003504.1|AE003504 Drosophila melanogaster genomic scaffold 142000013386053 section 21 of 30, complete sequence
Position Repeat-length Repeat
370 18/20 TTTTTCTTTTTTTTTTTTTG
2860 21/23 AAAAACAAAAAAAAAAAAGAAAA
9223 19/21 AAAAAAAAAAAAAAAAGAGAA
53642 19/21 AAAAAAAAAATAAAATAAAAA
62380 20/22 TTTTTTTTTTTTTTTTTTTTGA
70195 22/24 AAAAACAAAAAAAAAAAAAAAGAA
81513 23/25 TTTTTTTTTTTTTTTTTTTTTTGGT
93651 18/20 GGGGGGGGGGGGAGAGGGGG
99655 18/20 AAAAAAAAAAAAATAAAGAA
116741 27/30 TTTTTTTTTTTTTTTTTTTTTTTTTTGTGG
126089 20/22 TTTTTTTTTTTTTTTTTTTGTG
127825 20/22 GGGGGGGGGGGGGAGGGGGCGG
130809 24/26 TTTTTTTTTTTTTTTTGTTTTGTTTT
137592 21/23 TTTTTTGTTTGTTTTTTTTTTTT
154441 18/20 AAAAACCAAAAAAAAAAAAA
155091 18/20 TTTTTATTATTTTTTTTTTT
155670 18/20 AAAAAATAAAAAAAAAAAAG
184053 21/23 TTTTTTTTTTTTTTTTTTTGATT
238571 37/41 AAAAAATAACAAAAAAAAAAAAAAAAAAAAAAAAAAAACGA
247716 18/20 AAAAAGCAAAAAAAAAAAAA
248443 18/20 TTTTTTTTTTTTTTTTTTGG
249943 23/25 AAAAAAAAAAAAAAAAAATAACAAA
293475 22/24 TTTTTGTTTTTTTTTTTTATTTTT
----------------------------------------------------------------------------
Total sequence length......................... 298536
Total number of repeats detected.............. 23
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 9 10 2 0
30 to 39 0 1 0 0
40 to 49 1 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 10 11 2 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7293251|gb|AE003503.1|AE003503 Drosophila melanogaster genomic scaffold 142000013386053 section 20 of 30, complete sequence
Position Repeat-length Repeat
1306 18/20 AAAAAAAAAAAAAAAAACAC
9507 20/22 TTTTTTTTTTTTTTTTTTATCT
10050 18/20 TTTTTTTTTTTTTAATTTTT
34569 19/21 AAAAAACAAAAAAAAAAAAAT
38369 20/22 AAAAAAAAAAAAACAAAAAAAG
39219 23/25 TTTTTTTTTGTTTCTTTTTTTTTTT
55682 21/23 AAAAAAAAAAAAAAAAATAATAA
56677 23/25 TTTTTTTTTTTTTTTTTTTTTTTAC
60779 18/20 AAAAAAAAAAAAAAAACGAA
68652 20/22 AAAAAAAAAAAAAACAAAAAAT
80391 22/24 TTTTTTTTTCTTTTTTTTTTCTTT
80683 20/22 AAAAAAAAAAAAAAAAATAAAG
81305 19/21 TTTTTTTTTTTTTTTTGTATT
82937 18/20 TTTTTGTTTGTTTTTTTTTT
97734 24/26 AAAAAAAAAAAAAAAAAAAAAAACAC
98612 19/21 TTTTTTTGTATTTTTTTTTTT
101591 24/26 TTTTTGTTTTTTTTTTTTGTTTTTTT
105328 20/22 AAAAAAAAAAAAAAAACAAAAC
113441 21/23 TTTTTTTTTTTTTTTTTTTTTGG
114502 19/21 TTTTTTTTTTTTTTAATTTTT
121392 18/20 TTTTTTTTTTTTTTTTTTGG
123743 21/23 AAAAAAAAAAAAAAAAAAAAACT
124774 19/21 TTTTTTTTTTTTTTTTTTGTA
125344 22/24 AAAAAAATTAAAAAAAAAAAAAAA
126967 18/20 AAAAAACAAAAAAAAAATAA
132161 20/22 TTTTTTTTTTTTTTTCTTTTCT
133753 20/22 TTTTTTTTTTTTTCTTTTATTT
140592 20/22 TTTTTTTTCATTTTTTTTTTTT
162906 20/22 TTTTTTTTTTTTTGTTTTTGTT
175746 18/20 AAAAAAAAAGAAAACAAAAA
178553 19/21 TTTTTTTTTTTTTTTTGTGTT
178905 21/23 AAAAAAAAAAAAATAAAATAAAA
180121 21/23 AAAAAAAAAAAAAAAAAAACACA
180293 19/21 AAAAAAAAAAGAAAAAGAAAA
181307 18/20 TTTTTTTTTTTTTTTTTATC
197391 21/23 AAAAAAAAAAAAACAAACAAAAA
202201 22/24 TTTTTTTTTTTTGTTTTTGTTTTT
214536 22/24 AAAAAAAAAAAAAAAAAAAAGAAG
215647 21/23 TTTTTTTTGTTTTTTTTTTTGTT
228336 19/21 GGGGGGGGGGGGGGGGGAGTG
229923 20/22 TTTTTTTTTTTTTTTCTTTTCT
239560 18/20 AAAAAAAAAAAATAATAAAA
253555 22/24 TTTTTTTTTTTTTTTTTTTTGGTT
262495 22/24 TTTTTTGTTTTTGTTTTTTTTTTT
264084 22/24 TTTTTTTTTTTTTTTTGTTTTTGT
266805 18/20 TTTTTTGCTTTTTTTTTTTT
267896 18/20 AAAAAAAAAAAAAAAAAACT
268601 24/26 TTTTTTTTTTTTTTTTGTTTTTTTTG
278428 19/21 TTTTTTTTTTATTATTTTTTT
278772 22/24 AAAAAAAAAAAAAAAAACAGAAAA
283842 18/20 TTTTTTTTTTTTATTATTTT
284740 21/23 TTTTTTTTTTTTTTTTGTTTTTA
293485 20/22 TTTTTTTTATTTATTTTTTTTT
299132 23/25 AAAAACAAAAAACAAAAAAAAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 300310
Total number of repeats detected.............. 54
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 22 31 1 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 22 31 1 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7293211|gb|AE003502.1|AE003502 Drosophila melanogaster genomic scaffold 142000013386053 section 19 of 30, complete sequence
Position Repeat-length Repeat
5270 22/24 TTTTTTTTTTTTTTTTTTTGTATT
35939 20/22 TTTTTTTTTTTTTTTATTTATT
71544 23/25 AAAAAAAAAAACAAAAAAAAAAAAG
73653 18/20 AAAAATAAAAAAAATAAAAA
102210 29/32 AAAAAAAAAAAAAAAAAAAACCAAAAAAAACA
117646 18/20 AAAAAAAAGATAAAAAAAAA
117790 26/28 AAAAAAAAAAAATACAAAAAAAAAAAAA
118903 18/20 AAAAATAATAAAAAAAAAAA
120204 20/22 TTTTTTTTTTTTGTTTTATTTT
124119 20/22 TTTTTTTTTTTTTATTTCTTTT
126257 21/23 TTTTTTTGTTTTTTTTTTCTTTT
131651 22/24 TTTTTTTTATTTATTTTTTTTTTT
133092 19/21 TTTTTTTGTTTTTTTTTTTTG
133761 23/25 TTTTTTTTTATTCTTTTTTTTTTTT
133934 20/22 TTTTTTTTTGTTTTTTTTTTTG
142435 23/25 TTTTTTTTTTTGTTTTTTTTTTTTA
156122 19/21 TTTTTTTTTTTGTTTGTTTTT
156811 20/22 TTTTTTTTTTTTATTTTGTTTT
165470 23/25 TTTTTTTTTTTTTTTTGTTTTTTTG
172990 20/22 TTTTTTTTTTTCTGTTTTTTTT
174523 25/27 TTTTTTATTTTTATTTTTTTTTTTTTT
182995 18/20 TTTTTTTTTTTTTTTTTTGA
197786 24/26 TTTTTTTTTTTTTTTGTTTCTTTTTT
203979 20/22 TTTTTGATTTTTTTTTTTTTTT
215993 22/24 TTTTTTTTTTTAATTTTTTTTTTT
221488 21/23 TTTTTTTTTGTTTTTTGTTTTTT
230315 26/28 TTTTTTTGTTTTGTTTTTTTTTTTTTTT
235621 20/22 AAAAAAAAAAAACAAAAAACAA
238125 27/30 AAAAACAAACAAAAAAAAAAAAAAAAAAAC
239793 24/26 AAAAAAAAAAAAAAAAAAAAAAAACT
240420 20/22 TTTTTTTTCTTTTTTTTTTTTG
242209 18/20 AAAAAAAAAAAAAAGAGAAA
264891 20/22 TTTTTTTTTGGTTTTTTTTTTT
282248 24/26 TTTTTGTTTTTTTTTGTTTTTTTTTT
288853 18/20 TTTTTTTTTTTTTTTTTATC
----------------------------------------------------------------------------
Total sequence length......................... 301929
Total number of repeats detected.............. 35
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 8 25 0 0
30 to 39 2 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 10 25 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7293176|gb|AE003501.1|AE003501 Drosophila melanogaster genomic scaffold 142000013386053 section 18 of 30, complete sequence
Position Repeat-length Repeat
41667 19/21 TTTTTTTTTTTTTTGCTTTTT
43046 18/20 TTTTTTTTTTTTTTGTTTTC
43704 19/21 TTTTTTATTTTCTTTTTTTTT
56621 19/21 TTTTTTTTTTTTTTTTTTTGA
57611 19/21 TTTTTTGTTTTCTTTTTTTTT
76157 18/20 TTTTTGTTATTTTTTTTTTT
76513 20/22 GGGGGGGGGGGGGGGGGGTGGT
80370 18/20 TTTTTTTTTTTTTTTTTGCT
81843 20/22 TTTTTTTTTTTTTGTATTTTTT
85167 19/21 AAAAAAAAAAAAAAAAAAACG
92844 23/25 TTTTTCTGTTTTTTTTTTTTTTTTT
93344 30/33 TTTTTTTCTTTTTTTTTTTTTTTTGTTTTTCTT
95151 18/20 AAAAAAAAAACAAAATAAAA
97064 21/23 AAAAAAAAAAAAAGAAAAAAATA
99705 41/45 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCACACA
100382 22/24 TTTTTTTTTTGTTTTTTTTTTTGT
102131 18/20 CCCCCCCCCCTCCCCCCGCC
102417 20/22 AAAAAAAAATAAAAAATAAAAA
102843 21/23 TTTTTTTTTTTTTGTTTTTTTTC
105370 24/26 AAAAAAAAAAAAAAAAGAAAAAAACA
106943 22/24 TTTTTGTTTTTTTTTTTTTTTTTG
107771 27/30 AAAAAAAAAAAAAAAGAAAAAAAAAACAAG
119595 18/20 AAAAAAAAAAAAAAATATAA
120176 20/22 AAAAAAAAAACAAAAGAAAAAA
121679 19/21 TTTTTTTTTTTTTTTAGTTTT
125715 18/20 TTTTTTTTTTTTTCTGTTTT
126284 18/20 AAAAAAAAAAAAAAAATGAA
128647 23/25 CCCCCCCCCCCCGCCCCCTCCCCCC
131287 18/20 AAAAAAAAAAAAAAAACACA
132130 20/22 AAAAAAAAAAAAAAAAACAAAT
132153 18/20 AAAAAACCAAAAAAAAAAAA
134010 21/23 AAAAAAAAATAACAAAAAAAAAA
136763 20/22 TTTTTTTTTTTTTTTTTGTGTT
139372 22/24 TTTTTTTTCTTTTTTTTTTTGTTT
141862 20/22 TTTTTTTTTTTTTTTGTTGTTT
144682 18/20 AAAAAAAATAAAAAAAATAA
147062 22/24 TTTTTCTTATTTTTTTTTTTTTTT
152541 18/20 TTTTTTTTTTTTTTTTTGTG
159217 21/23 AAAAAAAAAAAAAAAAAAAATAT
160380 19/21 CCCCCCCCCTCCCCCTCCCCC
165567 18/20 AAAAAACACAAAAAAAAAAA
167579 22/24 AAAAAAAAAAACACAAAAAAAAAA
168030 20/22 AAAAAAAAAAAAAAAAAAATAG
168862 18/20 AAAAAAAAAAAAAAGCAAAA
169515 20/22 AAAAAAAAAAAAAAAAACACAA
170007 24/26 AAAAAAAAAAAAAAGAGAAAAAAAAA
170964 24/26 TTTTTTTTTTTGTTTTTTTTTTTTTC
186322 23/25 AAAAAAAAAAAAAATAAAAAAATAA
201729 18/20 AAAAAGAAAAAAAAAAAAAT
202098 22/24 AAAAAAAAATAAAAAAAAAACAAA
202634 18/20 AAAAAAAAAAAAAAGAAAAG
203019 21/23 AAAAAAAAAAAAAAAAGAAAATA
203247 22/24 AAAAAAAAAACCAAAAAAAAAAAA
204685 18/20 AAAAAAAAAAAATAAATAAA
215221 18/20 AAAAAAAAAAAGAAGAAAAA
218267 25/27 TTTTTTTCTTTGTTTTTTTTTTTTTTT
218468 23/25 AAAAAAAAAAAAAAAAAGAAAAAAC
219721 19/21 TTTTTTTTGTTTTTTTTTTTC
220121 20/22 TTTTTTTTTGTTTTTTTTTTAT
222756 19/21 AAAAAAAAAAAAAGAAGAAAA
225740 18/20 TTTTTTTTTTTTTTTTGCTT
231730 19/21 AAAAAAAAAAACAAAAAAAAG
259142 19/21 AAAAAAACAAAACAAAAAAAA
273731 19/21 TTTTTCCTTTTTTTTTTTTTT
274296 19/21 AAAAAACAAAAAAAAAAAAAC
299502 19/21 TTTTTTTTCTTTCTTTTTTTT
----------------------------------------------------------------------------
Total sequence length......................... 300191
Total number of repeats detected.............. 66
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 33 26 1 3
30 to 39 1 1 0 0
40 to 49 1 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 35 27 1 3
----------------------------------------------------------------------------
Genomic Sequence:
gi|7293108|gb|AE003500.1|AE003500 Drosophila melanogaster genomic scaffold 142000013386053 section 17 of 30, complete sequence
Position Repeat-length Repeat
79174 24/26 TTTTTTTTTTGTTTTTTTTTTTTTGT
95812 18/20 TTTTTATTTTTATTTTTTTT
97822 19/21 TTTTTTTTTTTTTTTTTTATC
103192 31/34 TTTTTTTTTTTTGTTTTTTTTTTTTTTTAATTTT
105355 18/20 GGGGGGGGGGGGGGGGGGTT
116078 18/20 AAAAAAAATGAAAAAAAAAA
116292 28/31 AAAAAACAAAAAAAAAACAAAAAAAAAAATA
128588 28/31 AAAAAAAAAAAAAAAAAAAAAAAAAAAATTT
131962 27/30 AAAAAAAAAAAAAAAAAAAAAAAAAAACTG
140818 23/25 TTTTTTTTTTTTTCTTTTTTCTTTT
141041 18/20 TTTTTTTTTTTTTTTTTTGA
153677 19/21 AAAAAAAAAAACAACAAAAAA
154297 19/21 AAAAAAAATAAAATAAAAAAA
176534 18/20 TTTTTTTTTTTTTTTCTTTG
190654 20/22 AAAAAAAAAAAAAAAAAAACGA
210383 31/34 TTTTTTTTTGTTTTTTTTTTTTTTTTGTTTTTGT
219478 24/26 AAAAATATAAAAAAAAAAAAAAAAAA
228550 21/23 AAAAAAAAAAAAAAAAAGAACAA
236725 23/25 AAAAACAAAAAAAAAAAAAAAAAAT
240332 40/44 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAA
262061 22/24 AAAAAAAAAAAAAAAAAAAAAATT
267373 21/23 TTTTTTTTTTTTTTTTTTTTTGA
279159 19/21 TTTTTTTCTTCTTTTTTTTTT
295514 21/23 AAAAAATACAAAAAAAAAAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 327311
Total number of repeats detected.............. 24
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 9 8 1 0
30 to 39 3 2 0 0
40 to 49 0 1 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 12 11 1 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7293065|gb|AE003499.1|AE003499 Drosophila melanogaster genomic scaffold 142000013386053 section 16 of 30, complete sequence
Position Repeat-length Repeat
30756 24/26 AAAAAAAAAAAAAAATAAAAAAATAA
33709 18/20 AAAAAAACAAAAAAAAAAAC
35662 23/25 AAAAAAAAAAAAAAAAAAAAAATTA
35905 19/21 TTTTTTTTTTTTTTTTTTTGG
63134 18/20 GGGGGGGGGGGGGAAGGGGG
90024 20/22 AAAAAAAAAAAAAAACCAAAAA
93814 18/20 AAAAAGAAAAAAAAAGAAAA
104879 18/20 AAAAACAAAAAAAAAACAAA
107421 18/20 TTTTTTCTTATTTTTTTTTT
132403 20/22 AAAAACAAAAAAAAAAAAAAAG
138321 27/30 AAAAAAAAAAAAACCAAAAAAAAAAAAAAG
141589 25/27 AAAAAACAAACAAAAAAAAAAAAAAAA
156973 19/21 TTTTTTTTTTTTTTTTTTTGG
180986 19/21 AAAAAACAAAAAAAAAAAACA
194354 18/20 CCCCCCCCCCCCCCCCCCTT
207326 19/21 AAAAACAAAAAAAAAAACAAA
207973 18/20 TTTTTTTTTTTTTTAGTTTT
208215 18/20 AAAAAAAAAAAAAAATCAAA
208306 21/23 AAAAAAAAAAAAAAAATAATAAA
211468 19/21 TTTTTTTTTTTGTTATTTTTT
211960 18/20 TTTTTTTTTTTTTTTTTTCA
214598 21/23 TTTTTTTTTTTTTTTGGTTTTTT
214931 19/21 TTTTTTTTATTTTTTTTTTTG
216793 19/21 AAAAAAAAAAAAACAAAAACA
217022 18/20 TTTTTTTTTTTTTTTTTTGC
218914 22/24 TTTTTTCGTTTTTTTTTTTTTTTT
224657 19/21 AAAAAAATACAAAAAAAAAAA
224755 18/20 AAAAAAAAACGAAAAAAAAA
228100 22/24 TTTTTTTTTTTTTTTTTTTTTTAG
233208 19/21 TTTTTTTTTTTTTTTTTTTGC
235460 21/23 AAAAAAAAAAAAAAAAACATAAA
240987 20/22 AAAAAAAAAAAAAAAAAGAAAC
244789 25/27 TTTTTTTTTTTTTTTTTTTTTTTTTGC
273015 20/22 TTTTTTTTTTTTTTAATTTTTT
290449 21/23 AAAAAAAAAAATAAAACAAAAAA
290698 21/23 AAAAAAAAAAGAAAAAATAAAAA
301295 18/20 TTTTTTTTTTTTTGTTTTTC
----------------------------------------------------------------------------
Total sequence length......................... 301550
Total number of repeats detected.............. 37
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 19 15 1 1
30 to 39 1 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 20 15 1 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7293037|gb|AE003498.1|AE003498 Drosophila melanogaster genomic scaffold 142000013386053 section 15 of 30, complete sequence
Position Repeat-length Repeat
17518 25/27 AAAAAAAAAAAAAAAAAAAACAAAAAT
36703 19/21 AAAAAAAAAAAAAATAATAAA
57041 20/22 TTTTTATTGTTTTTTTTTTTTT
60838 18/20 AAAAAAAAAAAAATAAAACA
62597 22/24 AAAAAAAAAAAAAAAAAAATTAAA
64097 22/24 TTTTTTTTTTTGTTTTTTTTTTTG
64851 18/20 CCCCCCCCCCCCCCCACCAC
67532 25/27 TTTTTTTTTTTTTTTTTTTTTTTTTGG
68065 25/27 TTTTTTTTTTTTTTTTTGTTTCTTTTT
110510 21/23 TTTTTCATTTTTTTTTTTTTTTT
111255 22/24 AAAAAAAAAAAAAAAGAATAAAAA
139914 18/20 GGGGGGGGGGGGTCGGGGGG
140992 19/21 TTTTTTTTTTTTTTTTTTTGG
144380 23/25 AAAAAAAAAAAAAAACAAAAAAACA
147725 19/21 AAAAAAAAAAAAAAAAACGAA
151754 18/20 TTTTTATTTTTTTTTTTTTA
152129 18/20 TTTTTTTTTTTTTTTTTTGG
152291 20/22 TTTTTTTTTTTTTTTTGTTTTG
156333 20/22 TTTTTTTATTTGTTTTTTTTTT
164135 18/20 AAAAATAGAAAAAAAAAAAA
172920 18/20 AAAAAAAAAAAAAAGGAAAA
178100 22/24 AAAAACAAAAAAAAAAAAAAAGAA
188814 20/22 TTTTTTTTTTTTTTTTTGTTGT
198913 25/27 AAAAACCAAAAAAAAAAAAAAAAAAAA
208566 20/22 AAAAAAAAAATAAAATAAAAAA
209894 23/25 TTTTTTTTCTGTTTTTTTTTTTTTT
218624 19/21 AAAAAAAAAAAAAATACAAAA
224487 18/20 AAAAAAAAAAAAAAAACAAC
251966 18/20 TTTTTTTTAGTTTTTTTTTT
259980 19/21 AAAAAAAAACAAAAAAAAAAT
260302 19/21 TTTTTTTTTTTTTTTTTTTGG
265751 18/20 AAAAACAAAAAAAAGAAAAA
266599 23/25 AAAAAAAAAAAAAGAAAAAAATAAA
281427 19/21 TTTTTTTATTTTTTTTTGTTT
284512 26/28 AAAAAAAAAACCAAAAAAAAAAAAAAAA
284934 19/21 TTTTTTTTTTTTTTTTTTTGC
293635 19/21 AAAAAAAAAAAAAGGAAAAAA
304110 19/21 TTTTTTTTTTTTTTTTGCTTT
309966 24/26 TTTTTTTTTTGTTTGTTTTTTTTTTT
311967 20/22 TTTTTTTTTTTTTGTTTATTTT
----------------------------------------------------------------------------
Total sequence length......................... 313384
Total number of repeats detected.............. 40
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 19 19 1 1
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 19 19 1 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7293000|gb|AE003497.1|AE003497 Drosophila melanogaster genomic scaffold 142000013386053 section 14 of 30, complete sequence
Position Repeat-length Repeat
2292 18/20 AAAAAAAAAAATAAAACAAA
10522 18/20 AAAAAAAAAAAAAAAAAAGG
16912 20/22 TTTTTTTTCTTTTTTTTTTGTT
23875 20/22 TTTTTATTTTTTGTTTTTTTTT
25579 25/27 TTTTTTTTTTTTTTTTTTTTTTTTGTC
69206 25/27 TTTTTTTTTTTTTTGTATTTTTTTTTT
79038 20/22 TTTTTTATTTTTTTTTTTTTTG
85049 21/23 AAAAAAAAAAAAAAAAAATTAAA
91706 22/24 TTTTTTTTTTTTTTTTTTTTGGTT
100542 22/24 TTTTTGTTTTTTTTTTTTTTTTGT
105399 19/21 AAAAAAAAAAAAAAAAAAACT
106170 25/27 AAAAAAAACCAAAAAAAAAAAAAAAAA
117509 21/23 AAAAAAAAAAAAAAAACAAAAAT
121946 21/23 AAAAACAAAAAGAAAAAAAAAAA
128314 21/23 AAAAAAAAAAATAAAACAAAAAA
135862 18/20 AAAAAAAGATAAAAAAAAAA
144931 21/23 AAAAACAAAAAAAAAAAAACAAA
167477 18/20 TTTTTTTTTATTTTTTTTTC
175381 21/23 TTTTTTTTTTTCTTTTTTTTGTT
177718 21/23 TTTTTTTTTTTTTTTTTTTTTGC
188575 20/22 AAAAAAAAAAAACGAAAAAAAA
192305 20/22 TTTTTTTTAGTTTTTTTTTTTT
196181 18/20 TTTTTTTCTTTTTTTTTTTG
196665 18/20 CCCCCCCCCCCCCCCCACAC
200182 20/22 AAAAAAAAAAACAAAAAAAGAA
220845 21/23 AAAAAAAAAAAACAAAAAATAAA
239537 24/26 AAAAAAAAAAAAAATAAAAAAAAAAT
242027 22/24 AAAAAAAAAAAAAGAAAAAAAAAG
----------------------------------------------------------------------------
Total sequence length......................... 302494
Total number of repeats detected.............. 28
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 15 12 0 1
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 15 12 0 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7292986|gb|AE003496.1|AE003496 Drosophila melanogaster genomic scaffold 142000013386053 section 13 of 30, complete sequence
Position Repeat-length Repeat
557 20/22 TTTTTTTTTTTTTTTTTTCTCT
7799 19/21 TTTTTTTTTTTTTTTTTTTGG
9607 18/20 TTTTTTTTTTTTTGTGTTTT
11170 18/20 TTTTTGTTTTTTTTTTTTAT
15110 21/23 TTTTTTATTTTTTTATTTTTTTT
29706 20/22 AAAAAAAAAACGAAAAAAAAAA
30522 21/23 AAAAAAAAATAAAAAAAAAAAAC
31648 19/21 AAAAAAAAAAAAAAAAAACAT
38959 18/20 GGGGGGGGGGGGGGGCAGGG
48297 21/23 TTTTTTTTTTTTTTTTTTTTGGT
73605 18/20 GGGGGGCGGGGGGGGTGGGG
74188 21/23 TTTTTTGTTTGTTTTTTTTTTTT
112381 18/20 GGGGGGGGGGGGGGGGGGAA
113744 19/21 AAAAAAAATAAAAAAAACAAA
115722 21/23 AAAAAAAAAAAAAACAAAAAAAT
125365 18/20 TTTTTTTTTTTTTTTTGTTG
127934 18/20 TTTTTTTTTTTTTTTTTGGT
137671 18/20 TTTTTTTTCTTTTCTTTTTT
140192 18/20 TTTTTTTTTTTTTGTTTATT
143682 22/24 TTTTTTTTTTTTTTTTTGTTTATT
153747 20/22 AAAAAAAAAAAAAAGAAAGAAA
158688 20/22 TTTTTTCTGTTTTTTTTTTTTT
159095 29/32 AAAAAACAAAAAAAAAAAAAAAAAAAAAACCA
167478 20/22 GGGGGGGGGGGGGGGCAGGGGG
170655 19/21 AAAAAAAAACCAAAAAAAAAA
182037 26/28 TTTTTTTTTTGTATTTTTTTTTTTTTTT
182776 18/20 TTTTTTTTTTTTTTTGGTTT
184740 20/22 TTTTTTTTTTTTTTTTTTTTCG
195706 24/26 TTTTTTTTTTTTTTTTTTTTTGTTTG
198576 18/20 TTTTTTTTTTTCTTTTTGTT
209103 19/21 AAAAAAAAAAAAAAAAACAAC
212062 22/24 AAAAAGAAAAAAAACAAAAAAAAA
221618 20/22 AAAAAAAAAAAAAAAAAGAAAT
222846 19/21 AAAAAAAAAACAAAAAAAATA
232517 23/25 TTTTTTTTTTTTTTTTTTTTGTTTA
234440 19/21 AAAAAAAAAAGAAGAAAAAAA
235444 20/22 AAAAAAAAAAAAAAAAAAAATC
242218 18/20 TTTTTTTTTTTTTTTTTGCT
243194 20/22 AAAAAAAAAAAAATAAAAATAA
256761 18/20 TTTTTTTTTTCTTTCTTTTT
262390 19/21 TTTTTTTTTTTTTTTTCTTTG
272915 24/26 TTTTTTTTTTTTTTTTTTGTCTTTTT
274927 18/20 TTTTTTTTTTTTTTTTTTGG
277797 18/20 AAAAAAAAAAAAAAAGAGAA
279444 19/21 TTTTTTTATTTTTTTTTTCTT
280225 37/41 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTG
286617 18/20 TTTTTTTTTTTTTTTGTTTA
289422 41/45 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTTATTATTT
297821 20/22 TTTTTTTTTTGTTTTTGTTTTT
----------------------------------------------------------------------------
Total sequence length......................... 299357
Total number of repeats detected.............. 49
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 15 27 4 0
30 to 39 1 0 0 0
40 to 49 0 2 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 16 29 4 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7292953|gb|AE003495.1|AE003495 Drosophila melanogaster genomic scaffold 142000013386053 section 12 of 30, complete sequence
Position Repeat-length Repeat
534 21/23 CCCCCCCCCCCCCCCTCCCTCCC
5350 20/22 TTTTTTTTTTTTTTTTTAATTT
11093 21/23 TTTTTTTTTTTTGTTTTTGTTTT
16147 21/23 TTTTTTTTTTTTTTTCTTTTTTG
26822 20/22 TTTTTTTTTTTGTTTATTTTTT
31567 25/27 AAAAAAAAAAAAAAAAAAAAAAAGTAA
89075 19/21 TTTTTTTTTTGTTTTGTTTTT
92552 22/24 AAAAAAAAAAAAAACAAAGAAAAA
113941 18/20 TTTTTTTTTGTTTTTGTTTT
115370 26/28 TTTTTGTTTTTTTTTTTTTTTTTTTTTG
118685 20/22 TTTTTATTTTTTTATTTTTTTT
121621 21/23 AAAAAAAAAAAAAAAAACGAAAA
123430 18/20 TTTTTTTTTTGGTTTTTTTT
133568 20/22 TTTTTTTTTTTTTTTTTTGTTG
142580 18/20 TTTTTTTTTTTTTTTTGTTA
144855 18/20 TTTTTTTTTTTTTTTTGTGT
144894 19/21 TTTTTTTTCATTTTTTTTTTT
151682 24/26 AAAAAAAAAAAAAAAACAAAAAAATA
151812 20/22 TTTTTATTTGTTTTTTTTTTTT
155152 21/23 AAAAAAAAAAAAGAAAAGAAAAA
156674 18/20 TTTTTTTTTTTTTTTTGATT
156971 19/21 TTTTTTTTTCTTTTCTTTTTT
162243 19/21 AAAAAAAAAAAAAAAATATAA
164111 18/20 CCCCCCCCCCCCCCCCCCAA
169207 18/20 AAAAAAATAAAAAAAATAAA
172897 26/28 TTTTTTTTTTTTTTTTTTTTTGTATTTT
175068 20/22 AAAAAAAAAAAAAAAAAAAATT
176599 21/23 AAAAAAAAAAAAAAAAAAACCAA
182056 22/24 AAAAAAAAAAAAACAAAAAAAAGA
185428 21/23 TTTTTTTTTTTTTTTTGTTTGTT
205109 19/21 TTTTTTCTGTTTTTTTTTTTT
210574 22/24 TTTTTTTTTTTTTGTATTTTTTTT
222553 23/25 AAAAAAAAAAAAAAAAAAAAAAATT
225376 23/25 AAAAAAACAAAAAAAAAAAAAAAAC
225598 21/23 AAAAAAAAAAAATAAAAAAAAAG
233188 21/23 TTTTTTTCTTCTTTTTTTTTTTT
233894 18/20 TTTTTTTTTTTTTTTTTTGC
234971 18/20 TTTTTTTTTTTGTGTTTTTT
235561 19/21 TTTTTTTTTTTTGTTGTTTTT
235788 21/23 AAAAAAAAAAAAAAAAAAAAACC
236488 28/31 TTTTTTTTTTTTTTTTTTTTTTTTAATTTTA
246323 21/23 AAAAAAATACAAAAAAAAAAAAA
251677 22/24 AAAAAAAAAAAGAAAACAAAAAAA
258113 24/26 TTTTTTTTTTTTTTTTTTTCTTTTTC
259490 19/21 TTTTTTGTTTTTTTTTGTTTT
259740 19/21 TTTTTTTTTTTTTATTTTTTA
274111 19/21 AAAAAAAAAAAAAAAAAGAAC
280521 20/22 TTTTTTTTGTTTTTTTTTTTTG
282476 20/22 AAAAAACAAAAAAAAAAAAAAC
284249 18/20 TTTTTTTTTTTTTTTTTTGA
286523 19/21 AAAAAAAAAAAAAGAAAAGAA
298088 26/28 TTTTTTTATTTTATTTTTTTTTTTTTTT
299514 18/20 AAAAAAAAAAAAAAACAAAG
301310 24/26 TTTTTTTTTTTTTTTTTTGGTTTTTT
----------------------------------------------------------------------------
Total sequence length......................... 308307
Total number of repeats detected.............. 54
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 20 31 0 2
30 to 39 0 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 20 32 0 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7292942|gb|AE003494.1|AE003494 Drosophila melanogaster genomic scaffold 142000013386053 section 11 of 30, complete sequence
Position Repeat-length Repeat
1088 20/22 TTTTTGTTTTTTTTTTTTTTTG
9014 25/27 TTTTTTGTTTTTTTTTTTTTTTGTTTT
11378 22/24 AAAAAAAAAAAAAAAAAACAAAAT
11756 21/23 TTTTTTTTTTTTTTTTTTTGGTT
12603 18/20 AAAAAAAAAAAAGAAAAAAT
12895 18/20 TTTTTTTTATTTTTGTTTTT
14140 18/20 TTTTTTATTTTTATTTTTTT
15444 21/23 TTTTTTTTTTTGTTTTTTATTTT
17911 19/21 TTTTTTTTTTTTTTTTATGTT
18254 20/22 TTTTTTTTTTTCTTTTTTTTTG
19831 18/20 TTTTTTTTTTTTTTTTTTAA
30094 20/22 AAAAAATGAAAAAAAAAAAAAA
32240 20/22 TTTTTTTTTTTTTTTTTTTGCT
32955 19/21 AAAAAAAAAAAAAAATAATAA
35180 22/24 TTTTTATTTTTTTTTTTGTTTTTT
52240 18/20 AAAAAAAAAAAAAAGAGAAA
53787 18/20 GGGGGGGGGGGGGGAGGGGA
65229 19/21 AAAAAAAAAAACAAAAGAAAA
67290 19/21 TTTTTTTTTTTTTTCTGTTTT
67714 23/25 AAAAAACAAAAAAAAAAAAAAAACA
68567 22/24 AAAAAAAAAAAAAAGAAAAAAAAT
69904 18/20 AAAAAACAAAAAAAAAACAA
70258 26/28 AAAAAAAAAAAAATAAAAAAAAAGAAAA
73905 18/20 TTTTTTTTTTTCTTTTTTTA
78870 22/24 AAAAAAAAAAAAAAAAAAAGAAAG
85896 21/23 AAAAAAAAAAAAAAAATAATAAA
86821 23/25 TTTTTTTTTCTTTTTTTTTTTGTTT
87368 20/22 TTTTTTTTTTTTTTTGGTTTTT
88885 19/21 AAAAAAAAAACAAAAAAAAAT
89703 23/25 AAAAAAAAAAAAAAAATAAAAAAAT
90151 20/22 TTTTTTTTTTTTGGTTTTTTTT
94199 19/21 TTTTTTTTTTTTTTTTTTTGC
96859 20/22 TTTTTTTTTTTTTTTTGTTTCT
97794 22/24 TTTTTTTTTTTTTTTGTATTTTTT
99782 19/21 AAAAAAAAAAAAAAATAAATA
102090 19/21 AAAAAAAAAATAAAATAAAAA
108326 21/23 AAAAAAAAAAATTAAAAAAAAAA
115904 18/20 TTTTTTTTTTTTTTTTTGTA
117243 25/27 AAAAAAAAAAAAAAAAGAAAAAAACAA
117487 18/20 AAAAAACCAAAAAAAAAAAA
118474 18/20 AAAAAAAAAAAAAAAATACA
120099 20/22 AAAAAAAAAAAAAAAAAAATAT
124591 23/25 TTTTTTTTTTTTTTTTTTTTTTTGG
128068 18/20 AAAAAAAAAAAAACAACAAA
128779 19/21 TTTTTTTTTTTATATTTTTTT
129058 21/23 AAAAAAAAAAAAAAAAAAACAAC
129142 20/22 AAAAAAAAAAAAAAAACAACAA
135862 29/32 AAAAACGAAAAAAAAAAAAAAAAAAAAAAACA
136336 20/22 AAAAAAAAAAAAATAAAAAATA
144797 25/27 TTTTTTTTTTTTTTTTTTTGTATTTTT
155438 22/24 AAAAAAAAAAAAAAAAAAATGAAA
157973 21/23 AAAAACAAAAATAAAAAAAAAAA
160682 19/21 TTTTTTTTTTTTTGTTTTTAT
167580 21/23 TTTTTGTTTTTTTTTTGTTTTTT
176825 18/20 AAAAAAAAAAAAAAAAAATG
180501 29/32 TTTTTTCTTTCTTTTTTTTTTTTTTTTTTTGT
180873 27/30 TTTTTTTTTTTTTCTTTTTTTTTTTCTTTG
190743 20/22 TTTTTTTTTTTTTTTTTTATCT
192979 23/25 TTTTTTTTATTTATTTTTTTTTTTT
194806 19/21 TTTTTTTTTTTTTTTTGTTTA
194854 18/20 TTTTTTTTTTTTTTTGGTTT
197060 23/25 AAAAAAAAAAAAAAAATAAATAAAA
204911 22/24 AAAAAAAAAAAAAAAAAAAAATAG
214270 18/20 TTTTTTTTTTTTTTATTATT
214524 22/24 AAAAATACAAAAAAAAAAAAAAAA
217010 22/24 TTTTTTTTTTGTTTTTTTTTTGTT
218357 22/24 TTTTTTTTATTCTTTTTTTTTTTT
218735 20/22 AAAAAAAAAAAAAAAATGAAAA
225239 22/24 TTTTTTTTTTTTTTTTTTTTTGGT
247255 18/20 GGGGGGGGGTGGAGGGGGGG
251395 18/20 TTTTTTTTTCTTCTTTTTTT
251735 19/21 TTTTTTTTTTTTTTTTTTGGT
251851 23/25 TTTTTTTTATTTATTTTTTTTTTTT
252215 22/24 AAAAAAAAAAAAAAAAAAACACAA
253180 21/23 TTTTTTTTTTTTTTTTTTTGTTG
254152 19/21 GGGGGAGGGGGGGGGGGGTGG
254939 18/20 AAAAAAACAAAAACAAAAAA
255308 19/21 TTTTTTTTTTTTTTTTTATTC
266352 21/23 CCCCCCCCCCACCCCTCCCCCCC
266541 20/22 AAAAAAAAAAAAAAAAAAAGAT
269118 19/21 CCCCCCCTCCCCCCTCCCCCC
269791 18/20 AAAAAAATAAACAAAAAAAA
270108 28/31 AAAAAAAAAAAAAAAAAACAAAAAAAAGAAC
271655 19/21 TTTTTTTTTTTTTTTTTTGCT
272292 21/23 TTTTTATTTGTTTTTTTTTTTTT
274094 19/21 TTTTTTTTTTTTTTTTTGTAT
274712 20/22 AAAAAAAAAAAGAAAAAAAAAG
278030 20/22 TTTTTTCGTTTTTTTTTTTTTT
278889 23/25 AAAAAAAAAAAAAAAAAAAAAACAC
279008 25/27 TTTTTTTTTTGTTTTTTTTTGTTTTTT
280923 24/26 TTTTTCTTTTCTTTTTTTTTTTTTTT
282879 19/21 AAAAAAAAAAAAAAAAAAAGG
290196 21/23 GGGGGGGGGGGGGGGGGGCGTGG
290878 19/21 TTTTTTTTTTTTTTTTTGATT
292143 22/24 TTTTTTATTTTTTTTTTTTTTTTG
----------------------------------------------------------------------------
Total sequence length......................... 300080
Total number of repeats detected.............. 95
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 39 46 4 2
30 to 39 2 2 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 41 48 4 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7292892|gb|AE003493.1|AE003493 Drosophila melanogaster genomic scaffold 142000013386053 section 10 of 30, complete sequence
Position Repeat-length Repeat
12290 18/20 AAAAATAAAAATAAAAAAAA
15249 21/23 TTTTTTTTTTATTTATTTTTTTT
15512 20/22 GGGGGGGGGGGGGGGGGTGGCG
16355 20/22 TTTTTTTTTTTTTTTTATTTTG
29437 18/20 TTTTTTTTTTTTTTGTATTT
31443 26/28 TTTTTATTTTTTTTTTTGTTTTTTTTTT
32476 18/20 TTTTTTTTTTTTTTTTTGTC
32934 24/26 TTTTTTTTTTTTTTTGATTTTTTTTT
35233 22/24 AAAAAAAAAAGAAAAAAAAAACAA
36733 22/24 TTTTTTTTTTTTTTTTTTTGTTGT
40170 20/22 TTTTTTTTTTTTTTTTTTGGTT
40464 23/25 TTTTTTTTTTTTTTTTGTTTTGTTT
42311 18/20 TTTTTTTTTTTTTTTTTGGT
43908 20/22 AAAAACAAAAAAAAAAAAAAGA
74201 19/21 TTTTTTTTTTTTTTTTTTTGG
81805 19/21 CCCCCCCCCCCCCCCTCCCCG
89732 19/21 AAAAAAGAAAAAAAAAAAAAC
102106 21/23 AAAAAAAGAAAAAAAAAATAAAA
102784 20/22 AAAAAACAAAAATAAAAAAAAA
107843 22/24 TTTTTTTTTTTTTTGATTTTTTTT
129287 19/21 AAAAAAGAACAAAAAAAAAAA
138927 19/21 AAAAAAAAAAAAAAAGAAAAG
144629 24/26 TTTTTTTCTATTTTTTTTTTTTTTTT
146924 19/21 AAAAAAAAGCAAAAAAAAAAA
149208 22/24 TTTTTTTTTTTTTTTTTTTTTGTA
162640 22/24 TTTTTTTTTTTTTTTTTTTTTGGT
172105 18/20 TTTTTGTTTTTGTTTTTTTT
175498 19/21 TTTTTTTTGTTTTTTTTTTGT
191416 19/21 TTTTTTTTTTTGTTTTTGTTT
193943 20/22 AAAAAAAAAAAAAAACGAAAAA
210135 18/20 AAAAAAAAAAAACAGAAAAA
211814 20/22 AAAAAAAAAAAAAAATAAAGAA
219219 18/20 TTTTTTTTTTTTGTTTTTGT
230574 18/20 AAAAAAAAAACAAAAACAAA
236669 20/22 AAAAAAAAAAAACAACAAAAAA
238936 21/23 TTTTTTTTTTTTTTTTTTTTTGG
257817 24/26 TTTTTTTTTTTTTTTGTTTTGTTTTT
260086 23/25 TTTTTTTTTTTTTTTTTTTTTTTGG
260757 19/21 CCCCCTCCCCCCCCCCCCCGC
265096 18/20 TTTTTTTTTTCTTTTTCTTT
280787 18/20 AAAAAAAAAAAAAAAAAACT
293470 23/25 TTTTTTTTTTTTTTTGTTTGTTTTT
296234 19/21 TTTTTGTGTTTTTTTTTTTTT
298702 25/27 AAAAAAAAAGAAAAAAAAAACAAAAAA
303534 18/20 TTTTTCTTATTTTTTTTTTT
306244 18/20 TTTTTTTGTTGTTTTTTTTT
----------------------------------------------------------------------------
Total sequence length......................... 308093
Total number of repeats detected.............. 46
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 16 27 1 2
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 16 27 1 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7292850|gb|AE003492.1|AE003492 Drosophila melanogaster genomic scaffold 142000013386053 section 9 of 30, complete sequence
Position Repeat-length Repeat
12659 19/21 TTTTTTTTTTTTTTGCTTTTT
27611 21/23 TTTTTTTTTTATTTTTTTTTTTG
41036 19/21 AAAAAAAAAAATAAGAAAAAA
45679 20/22 AAAAAAAAAACAAAAAAACAAA
46216 24/26 TTTTTTTTCGTTTTTTTTTTTTTTTT
50418 19/21 AAAAAGAAAAAAAAAAACAAA
50723 24/26 TTTTTTTTTTTTTTTTTTTTTTTTGG
51534 22/24 TTTTTTTCTTTTATTTTTTTTTTT
52068 26/28 TTTTTTTTTTTTGGTTTTTTTTTTTTTT
64484 21/23 AAAAAAAAAAAAACGAAAAAAAA
65822 18/20 CCCCCCCCCCCCCACCCACC
65990 21/23 AAAAAAAAAAAGAAAAAAAGAAA
71732 18/20 TTTTTTTTTTGTTTTTTTCT
71928 18/20 AAAAAAAAAAACAAAAAAAT
80772 20/22 AAAAAAATAAATAAAAAAAAAA
83349 19/21 TTTTTTTTTCTTTTTCTTTTT
87716 18/20 AAAAAAAAAAAAAAAGAAAC
89345 32/35 AAAAAAAAAACAAAAAAAAAACAAAAAAAGAAAAA
89689 25/27 AAAAAAAAAAAAAAAAAAAAAAAAATG
93101 24/26 TTTTTTTTTTTTGTTTTTGTTTTTTT
95048 18/20 TTTTTTTTTGTTTTTTTTTG
96560 24/26 AAAAAAAAAAAAAACAAAAAAAAAAT
99422 19/21 AAAAAAAAAAAAAAAATGAAA
99975 24/26 TTTTTTTTTTGTTTTTTTTTTTTTGT
100593 24/26 TTTTTTTTTTATTTTTTTTTTTTTTG
112735 20/22 AAAAAAACAAAAAAAAAAAAAC
118420 20/22 AAAAAAAAAAAACAAAAAAAAC
119840 19/21 AAAAAAAAAAAAAATAAATAA
120089 18/20 AAAAAAAAAAAAAAAACACA
123617 18/20 TTTTTTTTTTTTGTTTTTTG
126139 20/22 TTTTTCTTTTTTTTTTTTTTTG
132663 25/27 AAAAAAAAAAAAAAAAATAAAAAAAAT
134631 18/20 TTTTTTTTTTTTGTGTTTTT
134890 23/25 TTTTTTTTCTTTTTCTTTTTTTTTT
144590 33/36 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCA
147276 26/28 TTTTTTTCTCTTTTTTTTTTTTTTTTTT
168891 19/21 AAAAAAAATAAAAAAAAAATA
171306 18/20 GGGGGGCGGGGGGGGGGCGG
171709 20/22 TTTTTTTTTTGGTTTTTTTTTT
171825 18/20 GGGGGCGGGGGGGGGGGGGA
173453 26/28 AAAAATAAAAAAAAAAAAAAAAAAAAAG
174246 31/34 AAAAAAAAAAAACTAAAAAAAAAAAAAAAAAAAG
175706 19/21 AAAAAAAAAAAAAAAAGACAA
176144 24/26 AAAAAAAAAAAAAAAAAAAAAACGAA
188245 21/23 AAAAAAAAAAAAACGAAAAAAAA
192826 20/22 AAAAATAAAAAAAAAAATAAAA
198574 19/21 TTTTTTTTTTTTTTTTTTTGA
198723 19/21 AAAAAAAAAAAAGAAAAAAAC
201177 21/23 AAAAAAAAAAAAAATAAAAATAA
204957 20/22 AAAAACAAAAAAAAACAAAAAA
205210 19/21 AAAAAAAAAAAAAAATAACAA
206822 25/27 AAAAAAAAAAAAAAAAAAAAAAATGAA
220537 23/25 AAAAAAAAAAAAAAACAAAAAAATA
225452 18/20 TTTTTTTTTATTTTTTTTTG
231073 22/24 AAAAAAAAAAAAAAAAAAAAAACC
250792 22/24 TTTTTTTTTCTTTTTTTTGTTTTT
253811 20/22 CCCCCCCCCCCCCCCCCCCACG
254390 21/23 TTTTTTTTTTTTTTGATTTTTTT
289183 19/21 TTTTTTTTTTTTTTTTTTTGC
292705 18/20 AAAAAAAGAAAAAAAAAACA
293718 21/23 TTTTTTTTTTTTTTCTTTTTTTG
295185 18/20 GGGGGGGGGGGGGCGGTGGG
298299 21/23 TTTTTATTTTTTTTTTTTTTTTA
----------------------------------------------------------------------------
Total sequence length......................... 298939
Total number of repeats detected.............. 63
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 30 25 3 2
30 to 39 3 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 33 25 3 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7292821|gb|AE003491.1|AE003491 Drosophila melanogaster genomic scaffold 142000013386053 section 8 of 30, complete sequence
Position Repeat-length Repeat
13746 19/21 AAAAAAAAAACAAAAAAAAAG
17211 18/20 AAAAAAAAAAAAAAACAATA
18380 19/21 AAAAAAAAAAAAACAAACAAA
19248 19/21 AAAAAAAAAAAAAAAACATAA
19330 18/20 AAAAAAAAAAAATGAAAAAA
20862 18/20 AAAAAAAAAAAAACAAAAAT
21310 21/23 AAAAAAACCAAAAAAAAAAAAAA
21711 23/25 AAAAAAAAAAAAAAAAAAAAAATAG
29917 19/21 AAAAACACAAAAAAAAAAAAA
34085 20/22 TTTTTTTTTTTTTTGTTGTTTT
34828 20/22 TTTTTTTTTTTTTAATTTTTTT
60917 23/25 AAAAAAAAAAAAATAAAAATAAAAA
71585 19/21 TTTTTTATTTTGTTTTTTTTT
72148 21/23 AAAAAAAAAAAAAAAAGAAAAAC
73597 20/22 TTTTTTTTATTTTTATTTTTTT
74534 19/21 TTTTTTTTTTTTCTTTTTTTG
75396 21/23 TTTTTTGCTTTTTTTTTTTTTTT
77353 20/22 AAAAAAAAAAAAAAATAAAAAT
82834 20/22 TTTTTTTTGTTTTTTTTTTTGT
83362 18/20 AAAAAACAAAATAAAAAAAA
97879 19/21 AAAAAAAAAACAAAAACAAAA
103823 22/24 AAAAACCAAAAAAAAAAAAAAAAA
108437 21/23 CCCCCCCCCCCCCCCCGCCACCC
110364 20/22 AAAAAACAAGAAAAAAAAAAAA
114198 20/22 TTTTTGTATTTTTTTTTTTTTT
114860 18/20 TTTTTTTTTTTTTTTGTTAT
121542 20/22 TTTTTTGTTTTTTTTTTGTTTT
123943 20/22 AAAAAAAAAAAAAAAAAAAATT
125121 18/20 AAAAAAAAAAAAAAGAAAAG
146827 19/21 AAAAAAAAAATATAAAAAAAA
150811 19/21 AAAAAAAAAAAAGAAAAACAA
151034 20/22 TTTTTTTTTTTTTTTTTTTGTG
151883 21/23 TTTTTTCTTTTTTTTTTTATTTT
156959 18/20 TTTTTTTTTTTTTTTTTTGA
168769 22/24 TTTTTGTTTTTTGTTTTTTTTTTT
175340 23/25 TTTTTTCTTTTTGTTTTTTTTTTTT
180035 21/23 AAAAAAAAAAAAAAAAAAACAAT
180806 21/23 TTTTTTTTTTTTTTTTGTTTTTG
184953 20/22 AAAAAAAATAATAAAAAAAAAA
189939 20/22 AAAAAACAAAAAAAAAAAATAA
190251 19/21 AAAAAATAAAAATAAAAAAAA
191230 19/21 TTTTTCTTTTTTTTTTCTTTT
191380 19/21 AAAAAAAAACCAAAAAAAAAA
195849 19/21 AAAAAAAAAAAAAAAAACCAA
211995 21/23 TTTTTTTTTTTTTTTGTTTGTTT
214512 24/26 TTTTTTCTTTTTTCTTTTTTTTTTTT
218099 21/23 AAAAAAAAATTAAAAAAAAAAAA
219691 24/26 TTTTTTTTTTTTTTTTTTTTTTTTGG
219931 18/20 TTTTTTTTTTTGTTTTTATT
220204 18/20 TTTTTTTTTTTTTTTGTATT
221732 18/20 AAAAAAAAAAAAAAAATTAA
225639 18/20 AAAAAAAAAAAACAAACAAA
242464 18/20 AAAAAAAAAAAAACAGAAAA
242831 18/20 CCCCCCCCCCCCCCCCCGCA
246623 18/20 AAAAAAAAAAAAAAACATAA
247815 28/31 TTTTTTTTTTTTTGTTTGTTTTTTTTTTTTG
249102 24/26 AAAAAACAAAAAAAAAAAAAAAAATA
253608 29/32 TTTTTTTTTTTTTGTTTGTTTTTTTTTTTTTG
254689 18/20 TTTTTTTTTTTTTTTGTATT
255185 19/21 AAAAAAAAAACAAAAAAAAAC
255880 21/23 AAAAAAAAAAAACAAAAAAAAAT
275697 21/23 AAAAAAAAAAAAAAAAAAAAAGT
287312 24/26 TTTTTTTTTTTTTTTTTGTTTTTGTT
294325 18/20 TTTTTTTTTTTTTTTTTATG
295521 20/22 TTTTTTCGTTTTTTTTTTTTTT
296094 21/23 TTTTTTTTTTTTTTGTTTTTTTG
297567 18/20 AAAAAAAAAAAAATAACAAA
301409 21/23 TTTTTTTTTTCTTTTTTTTTTTG
301536 19/21 CCCCCACCCCCCTCCCCCCCC
301711 19/21 TTTTTATTTTTTTTTTTTTTG
310142 21/23 TTTTTTTTTTTTTTTTTTTTTCA
313069 22/24 AAAAAAAAAAAAAATAATAAAAAA
314411 18/20 AAAAACAAAAAACAAAAAAA
314916 18/20 CCCCCCCCCCCCCACCCCTC
315873 18/20 AAAAAAAAAAAAAAAAAACT
317315 19/21 AAAAAAAAAAAAAAAAAATAC
318436 18/20 TTTTTTTTTTTTTGTTTTGT
318765 19/21 TTTTTTTTTTTTTTCGTTTTT
319628 18/20 TTTTTTTTTTTTTTTTGCTT
321260 20/22 TTTTTATTATTTTTTTTTTTTT
----------------------------------------------------------------------------
Total sequence length......................... 323489
Total number of repeats detected.............. 80
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 40 34 0 4
30 to 39 0 2 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 40 36 0 4
----------------------------------------------------------------------------
Genomic Sequence:
gi|7292788|gb|AE003490.1|AE003490 Drosophila melanogaster genomic scaffold 142000013386053 section 7 of 30, complete sequence
Position Repeat-length Repeat
18931 19/21 AAAAAAAAAAAAAAAAAAGTA
19610 18/20 AAAAAACAAAAAAACAAAAA
44845 19/21 AAAAAAGAAAACAAAAAAAAA
48844 19/21 AAAAAAAAAGAGAAAAAAAAA
51309 22/24 AAAAAGAAAAAAAGAAAAAAAAAA
52664 19/21 TTTTTTTCTTCTTTTTTTTTT
53106 26/28 AAAAAAAAAAAAAAAAAAAAAAAAAATG
55635 22/24 AAAAAGAAAACAAAAAAAAAAAAA
60424 19/21 TTTTTTTTTTTTGTTGTTTTT
60549 26/28 TTTTTGTTTTTTATTTTTTTTTTTTTTT
71083 20/22 AAAAAAATAAAAAATAAAAAAA
71208 18/20 TTTTTTTTTTTTTTTTTGTG
73914 26/28 TTTTTTTTTTTTTTTTTTTTTTTTGTTG
79885 19/21 TTTTTCGTTTTTTTTTTTTTT
80575 20/22 AAAAAAAAAAAAAAAAAATGAA
82065 20/22 TTTTTTTTTTTTTTTTTTGATT
84805 20/22 AAAAAAAAAAAAAAATAAGAAA
85094 18/20 AAAAAAAAAAAAAAAAAGAC
99317 22/24 AAAAAAAAAGAAAAATAAAAAAAA
101085 28/31 TTTTTTTTTTTTTTTTTTTTTTTTTTTGAAT
103785 21/23 AAAAAAAAAAAAAAAAAAAAATT
108531 18/20 AAAAAAAAATATAAAAAAAA
117728 21/23 TTTTTTTTTTTTTTTTTTGTGTT
120094 19/21 TTTTTTTTTTTTTTTTTTGCT
120345 18/20 AAAAACAAAAAAAAAAAAAC
123562 21/23 AAAAAAAAAACCAAAAAAAAAAA
129737 19/21 TTTTTTCTTTTTTTTTTATTT
139953 18/20 AAAAAAAAAAAAAAAACAAC
144902 24/26 TTTTTTTTTTCATTTTTTTTTTTTTT
155680 22/24 AAAAAAAAAAAAAAAGAAAAAAAT
160225 23/25 TTTTTTTTTTGTTTTTTTTTTTTTG
167080 23/25 AAAAAAAAAAAAAAAAACAAAACAA
175177 20/22 AAAAAAAAAAATAAAAAAATAA
186172 23/25 TTTTTTTTTGTTTTTTTTTTGTTTT
186541 22/24 TTTTTTTTTTTTTGTTTTTTGTTT
187106 22/24 TTTTTTTTTTTTTTTTTTTTTTGA
188883 19/21 TTTTTTTTTTTTTTTTTTTGC
191925 20/22 AAAAAGCAAAAAAAAAAAAAAA
199024 20/22 TTTTTTTTTTTTTTTTTTTTGA
199356 21/23 AAAAACAAAAAATAAAAAAAAAA
201336 18/20 AAAAATAAAAAAAAAATAAA
208070 23/25 TTTTTTTTTTTTTGTTTTTGTTTTT
211556 19/21 AAAAAAAAAAAAAACCAAAAA
213721 18/20 GGGGGGGGGGGGGGGAGGAG
228012 24/26 TTTTTGTTTTTTTTTGTTTTTTTTTT
236979 18/20 AAAAAAAAAAAAAAAGGAAA
241124 21/23 AAAAAAAAAAAAGAAATAAAAAA
244026 20/22 AAAAAACAAAACAAAAAAAAAA
246805 21/23 AAAAAAAAAAAAAAAAACAAAAC
251439 20/22 AAAAACAAAAACAAAAAAAAAA
257693 18/20 TTTTTTTTTTTTTTTTTGTA
263020 25/27 AAAAAAAAAAAAAGAAAAAGAAAAAAA
264678 18/20 TTTTTTTTTTCTATTTTTTT
266009 25/27 TTTTTTTTTTTTTTTTTTTTTTTGTGT
267077 18/20 AAAAAAAAAAAAACGAAAAA
268331 21/23 AAAAAAAAAAAAAAAAACAACAA
269374 20/22 TTTTTTTTTTTTTTTTTTGTTC
271133 18/20 TTTTTTTTTTTTTATTGTTT
271644 18/20 AAAAAAAAAAAAAAAACAGA
274655 19/21 AAAAAAAAAAAAAAAGAAAAT
294905 24/26 AAAAAAAAAAAAAACGAAAAAAAAAA
300367 23/25 AAAAAAAAAAAAAAAAAACAAAAAT
----------------------------------------------------------------------------
Total sequence length......................... 302752
Total number of repeats detected.............. 62
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 36 24 1 0
30 to 39 0 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 36 25 1 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7292759|gb|AE003489.1|AE003489 Drosophila melanogaster genomic scaffold 142000013386053 section 6 of 30, complete sequence
Position Repeat-length Repeat
11913 22/24 AAAAAAAAAAAGAAAAAAAAAATA
13980 18/20 AAAAAAGAACAAAAAAAAAA
14534 18/20 AAAAAACAAAAAAAAAAACA
20981 23/25 TTTTTGTTTTTTTTTTTTTTTTTGT
24706 23/25 AAAAAAAAAAAATAAAAAAAACAAA
30693 18/20 AAAAAAAAAAAAAACAAAAC
31953 19/21 TTTTTTTTTTATTTTTGTTTT
35395 19/21 CCCCCCCGCCCCCCGCCCCCC
41417 24/26 TTTTTTTTTTTTTTTTTTTTTTTGTC
54291 22/24 AAAAAAAAAAAACAAAAAAAAAAG
59137 19/21 TTTTTCTTTCTTTTTTTTTTT
76586 18/20 CCCCCCCCCCCCCCCCCATC
81046 24/26 TTTTTTTTTTTTTTTTTTTTGTTTGT
82178 18/20 AAAAAAAAAAAGAAAAAAAT
91147 18/20 AAAAAAAAAAAAAAAGTAAA
93510 18/20 CCCCCCCCCCCCCTCCTCCC
94506 22/24 TTTTTTTTTTTTTTTTTTTTTGAT
97633 24/26 TTTTTTTTTTTTTTTTGTTTTTTTGT
104211 22/24 AAAAAAAAAAAAAGAAAAAAAGAA
109237 19/21 AAAAAAAAAAAGAAAAAGAAA
111622 23/25 TTTTTTTTTTTTTTTTTGTTTGTTT
119284 23/25 GGGGGGGGGGGGGGGGGAGGGGTGG
122290 24/26 TTTTTTGTTTTTTTTTTTTTTTGTTT
131119 26/28 TTTTTTTTTTTGTGTTTTTTTTTTTTTT
133215 18/20 TTTTTTTTTTTTTTTTGATT
144197 21/23 TTTTTTTTGTTTTTTTTTTTTTG
151218 18/20 AAAAAAACAAAAAAAAAACA
166305 20/22 AAAAAAAAAACGAAAAAAAAAA
176895 20/22 AAAAAAAAGAGAAAAAAAAAAA
179120 20/22 AAAAAAAATAAAAAAAAGAAAA
180366 19/21 TTTTTTTTTTTTTTTTTTTCA
182159 22/24 TTTTTTCGTTTTTTTTTTTTTTTT
185724 18/20 AAAAAAAAAAGAAAATAAAA
186067 26/28 AAAAAACCAAAAAAAAAAAAAAAAAAAA
192880 23/25 TTTTTTTTTTTTTTTTTTTGTCTTT
204874 19/21 AAAAAAAAAAAAAAAAGAAAT
205555 24/26 TTTTTATTTTTATTTTTTTTTTTTTT
207821 26/28 TTTTTTTTTTTTTTGTTTTTTTTTTTTC
208705 20/22 TTTTTATTTTATTTTTTTTTTT
212693 18/20 GGGGGGTTGGGGGGGGGGGG
213659 20/22 TTTTTCCTTTTTTTTTTTTTTT
217798 27/30 AAAAAAAAAAAAAAAAAAAAACAAGAAAAT
231651 19/21 AAAAACCAAAAAAAAAAAAAA
233336 23/25 AAAAAAAAAAAAAAAAGAAAAAAGA
237929 28/31 TTTTTTTATTTTTTTTTTATTTTTTTTTTAT
241084 19/21 TTTTTTTTTTGTTTTTTTTTC
242155 24/26 AAAAAAAAAAAAAAAAAAATGAAAAA
242592 26/28 AAAAAAAAAAAAAAAAAAAAAAAAATAG
245924 18/20 TTTTTTTTTTTTGTTTTGTT
256467 19/21 AAAAAAAAAAAAAAAAAAACT
262651 19/21 AAAAAAAAAAAAAAAAACAAG
275416 18/20 AAAAATAAAAAAAAAAGAAA
301643 19/21 TTTTTTTTTTTTTTTTTTGAT
----------------------------------------------------------------------------
Total sequence length......................... 302915
Total number of repeats detected.............. 53
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 24 22 2 3
30 to 39 1 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 25 23 2 3
----------------------------------------------------------------------------
Genomic Sequence:
gi|7292734|gb|AE003488.1|AE003488 Drosophila melanogaster genomic scaffold 142000013386053 section 5 of 30, complete sequence
Position Repeat-length Repeat
11213 21/23 AAAAAAAAAAAACAACAAAAAAA
18412 21/23 GGGGGGGGGGGGGGGGGGAGGTG
19964 26/28 TTTTTTGTTTTTTTTTTTTTGTTTTTTT
28243 18/20 AAAAAAAAAAACAACAAAAA
34813 18/20 TTTTTTTTTTTTTTTTTTGG
36531 22/24 TTTTTTTTTTCTTTCTTTTTTTTT
49036 21/23 AAAAAAAAAACAAAAAAAAAAAG
54284 23/25 TTTTTTTTTTTTTTTTTTTTTTGCT
81034 18/20 AAAAAAAAAAAATAAATAAA
82750 18/20 TTTTTTTTTTTTTTCTGTTT
89007 23/25 TTTTTTTTTTTAATTTTTTTTTTTT
89439 19/21 AAAAAAAAAAAAAACAAAAAT
89649 23/25 GGGGGGAGGGGGGGGGGGGGTGGGG
101424 21/23 TTTTTTTTTTAGTTTTTTTTTTT
103100 23/25 TTTTTTTTGTTTTTTTTTTTTTTTG
104761 18/20 TTTTTTCTGTTTTTTTTTTT
109446 20/22 GGGGGGGGGGGGGGGGGGGTCG
114790 19/21 TTTTTTTTTTTTTTTTTATTA
116458 25/27 AAAAAAAAAAAAAAAAAAAACAGAAAA
118593 20/22 TTTTTTATTTTTTATTTTTTTT
121719 18/20 TTTTTTTTTTTTTGTTTTTG
124662 28/31 TTTTTCTGTTTTTTTTTTTTTTTTTTTTTTG
131765 23/25 TTTTTTTTTTTTTTTTTTTTTGTTG
134754 18/20 AAAAAACAAAAAACAAAAAA
135568 19/21 TTTTTTTTTTTTTTTTTTTGG
136025 18/20 CCCCCCCCCCCCCTCACCCC
141489 21/23 AAAAAAAAAAAAAGAAAATAAAA
141878 20/22 GGGGGGGGGGGGGGATGGGGGG
142488 19/21 TTTTTTTTTTTGTTTTTTGTT
143044 20/22 TTTTTATTTTTTTTTTTTTTTA
144509 22/24 TTTTTTTTTTTTTCTTTTTTGTTT
146697 19/21 AAAAAACAAAAAAAAATAAAA
158499 21/23 AAAAAAAAACAAAACAAAAAAAA
162836 25/27 AAAAAAAAAAAAAAAAAAAAAAAACAC
169549 25/27 AAAAAAAAAAAAAACAAAAAAAAAAAG
182949 18/20 TTTTTTGTTTTTTTTTTTTG
183877 30/33 TTTTTTTTTTTTGGTTTTTTTTTTTTTTTTTTG
192301 21/23 TTTTTTTTTTTTTTTTTGGTTTT
194823 21/23 TTTTTTTTTTTTTTTTTAGTTTT
198567 21/23 TTTTTTTTTTTTTTTTTTTTTGG
203283 18/20 TTTTTTTTTTTATTTTTGTT
206731 23/25 AAAAAAAAGAAAAAAAAAAAAAAGA
208783 23/25 TTTTTGTTTTTTTTTTTTTTTTCTT
209962 20/22 TTTTTTTTTTTTTTTTTTTTAC
212397 22/24 AAAAAAAAAAAAATAAAATAAAAA
214686 19/21 AAAAAAAAAAAAAAATAGAAA
215889 22/24 AAAAAAAAAGAAAGAAAAAAAAAA
218295 18/20 AAAAAAAAAAAAAAAATAGA
218707 19/21 TTTTTTTTTGCTTTTTTTTTT
219074 20/22 AAAAAAAAAAAAAAAACAGAAA
221681 21/23 AAAAAAAAAAATAAAAAGAAAAA
226121 22/24 TTTTTTTTTTTTTTTTTTATTATT
227368 23/25 AAAAAAAAAAAAAAAAAAACAAATA
230985 19/21 AAAAAAAAAAAAAAATTAAAA
233353 18/20 GGGGGGGGGGGGGGGGTTGG
233512 18/20 AAAAAAAAAAAAAAAATATA
246429 26/28 TTTTTTTTTTTTTTTTTTTTTTTTTTGG
251182 18/20 CCCCCCTCCCCCTCCCCCCC
251386 22/24 AAAAAAAAAAAAAAAAAAAAAATG
254641 28/31 AAAAAAACAAAAAAAAAAAAAAACAAAAAAC
255645 18/20 TTTTTTTTTTTTGTTTTTTG
260086 20/22 TTTTTTTTTGTTTTTTTTTTAT
265797 20/22 AAAAAAAAAAAAATAAAATAAA
274729 21/23 TTTTTTTTTTTTTTTTTTTTTGG
276377 21/23 TTTTTTTTTTTTTTTTGTTTTTC
278608 20/22 AAAAAAAAAAAAAATAAAAGAA
278812 21/23 AAAAAAAAAAAAAAAAAGAAACA
279027 24/26 AAAAAAAAAAAAAAAAAAAAAAAGGA
280389 19/21 AAAAAAAAAAAAAAAATCAAA
281497 18/20 AAAAAAACAAAAAAAAATAA
283898 18/20 TTTTTTTTTCTTTTTTTTTG
290746 25/27 AAAAAAACAAAAAAAAAAAAAAAGAAA
----------------------------------------------------------------------------
Total sequence length......................... 302797
Total number of repeats detected.............. 72
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 30 32 5 2
30 to 39 1 2 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 31 34 5 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7292680|gb|AE003487.1|AE003487 Drosophila melanogaster genomic scaffold 142000013386053 section 4 of 30, complete sequence
Position Repeat-length Repeat
445 23/25 AAAAACAAACAAAAAAAAAAAAAAA
1562 18/20 TTTTTTTGGTTTTTTTTTTT
22588 23/25 AAAAAAAAAAAAAAAAAAAAACAAT
42735 24/26 TTTTTTTTTTTTTTTTTTTTTTTTGG
43750 18/20 TTTTTTTTTTTTTTCTTTGT
45030 20/22 AAAAAAATAAAAAAAAAAACAA
45523 18/20 TTTTTTTTGTTTTTTTTTTG
57517 23/25 TTTTTATTTTTTTTTTTTTTTTTGT
58235 25/27 TTTTTTTTGTTTTTTTTTTTTTTTTTG
61427 18/20 AAAAAAAAAAAAAAGAAAAG
65845 22/24 TTTTTTTTTTTTTTTTTTCTTCTT
66437 21/23 AAAAAAAAAAAAAGAAAAAACAA
67454 26/28 AAAAAAAAAAAAAAAAAAAAAAAACCAA
68266 25/27 AAAAAAAAAAAAAAAATGAAAAAAAAA
68389 20/22 TTTTTTTTTTTTCTTTCTTTTT
68937 22/24 TTTTTGTTTTTTTTTTTTTGTTTT
69482 19/21 AAAAAACAAAAAAAAAAAAGA
77342 21/23 AAAAAAAAAAAAAAAAAACAACA
80676 20/22 TTTTTTTTTTTTTTTTTTGTTA
84954 19/21 TTTTTTTTTTATTTTATTTTT
92645 20/22 TTTTTTTTTGTTTTTTTTTATT
116869 21/23 AAAAAAAAAAAAACAAAACAAAA
117590 19/21 TTTTTTTTTTTTTTGTTTGTT
119801 18/20 AAAAAACAAAAAACAAAAAA
140233 18/20 TTTTTTTTTTTTTTATTGTT
215562 19/21 TTTTTTTTTTTTTTTTGTTTC
216395 18/20 TTTTTTTTTTTTTTTTGTAT
217475 18/20 TTTTTTTTTTTTTCTTTTTA
221693 20/22 TTTTTTTTTTTGTGTTTTTTTT
224036 19/21 TTTTTGTGTTTTTTTTTTTTT
226383 20/22 TTTTTTTTTTTTTTTTTTTGGT
228261 25/27 TTTTTGTTTTTTTTTTTTTTTTTTTGT
236261 18/20 AAAAAAAAAAAAAAAAAATT
237230 23/25 TTTTTTTTTATTTTTTTTTTTTATT
239307 22/24 TTTTTTTTTTTCTTTTTTTTTTGT
241300 22/24 TTTTTTTTGGTTTTTTTTTTTTTT
241753 18/20 TTTTTTTTTTTTAATTTTTT
244917 20/22 TTTTTTTTTTTTTTTATTATTT
249767 18/20 AAAAAAAAAAAAAAAAATAG
250939 21/23 TTTTTGTTTTTTTTTTTCTTTTT
260116 20/22 TTTTTTTTTTTTTTTGGTTTTT
269503 19/21 AAAAAAAAAAAAAGAAAAAAC
273440 19/21 AAAAAAATTAAAAAAAAAAAA
282354 23/25 AAAAAAAAAAAAAAACAAAAACAAA
283044 20/22 TTTTTTTTTATTTTATTTTTTT
283652 23/25 AAAAAAAAAAAAAACAAAAAAAACA
286861 20/22 AAAAAAAAAAAAAAAAACAGAA
287390 24/26 AAAAAACAAACAAAAAAAAAAAAAAA
298607 19/21 TTTTTTTTTTTTTTTTGTATT
----------------------------------------------------------------------------
Total sequence length......................... 301051
Total number of repeats detected.............. 49
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 19 30 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 19 30 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7292639|gb|AE003486.1|AE003486 Drosophila melanogaster genomic scaffold 142000013386053 section 3 of 30, complete sequence
Position Repeat-length Repeat
3844 22/24 AAAAAAAAAAAAAAAAACAAGAAA
4889 19/21 TTTTTTTTTTTATTTTATTTT
12891 18/20 TTTTTTTTTGTTGTTTTTTT
13762 20/22 AAAAAAAAAAAAAAAAAAGCAA
20452 18/20 AAAAAAAAAAAAAAAACACA
29400 21/23 TTTTTTTTTTTTCTGTTTTTTTT
33730 22/24 AAAAAAAAAAAAATAAAATAAAAA
33934 21/23 AAAAAAAAAAAACAGAAAAAAAA
38628 19/21 TTTTTTTTTTTTTTTTTGATT
40700 19/21 TTTTTTTTTTCTTTTTTTTGT
43410 24/26 TTTTTTTTTTTTTTTTTGTTTTGTTT
63374 22/24 AAAAAAAAAAAAACAAAAACAAAA
73490 22/24 AAAAAAAAAAAAAAAGAAAAAAAC
76667 18/20 AAAAAAAAAAAAAAAAAACC
89805 22/24 TTTTTTTTTGGTTTTTTTTTTTTT
91852 23/25 AAAAAAAAAAAAAAAAAAAAAAATG
112385 21/23 TTTTTTTTTTTTTTTTGTATTTT
114252 22/24 AAAAAAAAAAAAAAAAAAAGAAGA
116400 22/24 AAAAAAAAAAACATAAAAAAAAAA
117041 20/22 AAAAAAAAAAAAAATAACAAAA
119786 19/21 TTTTTTTTTTGTTTTTTTTGT
122176 21/23 AAAAAAAAAAAAATAAAAAAAAT
123352 18/20 TTTTTTTTTTTATTTTTCTT
125127 21/23 AAAAAAAAAAAAAAAAACATAAA
125627 19/21 TTTTTTGTTTTTTTTTTTTTA
132022 18/20 TTTTTTTTTTTTTTTTTGTG
134240 20/22 AAAAAACCAAAAAAAAAAAAAA
134919 23/25 AAAAAAAAAAAAATGAAAAAAAAAA
135237 19/21 AAAAAAAAAAAAAAAAGAAGA
151335 19/21 TTTTTTTTTATTTTGTTTTTT
152707 22/24 TTTTTTTTTTTTTTTTTTTTGTCT
154577 18/20 TTTTTTTTTTTTTTTTTGTG
154998 23/25 AAAAAAAAAAAAAAAAAAAAAGAAC
155048 18/20 AAAAAAAAAAGAAAAGAAAA
155264 18/20 TTTTTGTTTTTGTTTTTTTT
156114 25/27 AAAAAAACGAAAAAAAAAAAAAAAAAA
157811 22/24 AAAAAAAAAAAAAAGAAATAAAAA
168190 22/24 AAAAAAAAAAAAAAAACAATAAAA
219747 19/21 AAAAAAAAAAAGAAAAGAAAA
227869 18/20 AAAAAAATAATAAAAAAAAA
250008 20/22 AAAAAAAAAAAAAAACGAAAAA
260538 20/22 AAAAAAAAAATAAAAAAAAATA
261662 26/28 AAAAAAAAAAAAAAAACAAAAAAAAAAT
262067 23/25 AAAAAAAAAAAAACAAAAAAAAAAT
266691 18/20 AAAAAAAAAAAAAAAACGAA
283989 20/22 TTTTTTTTTTTTTTTTTTTTAC
284211 20/22 TTTTTTTTTTTTTTTTTTGTGT
286312 21/23 AAAAAAAAAAAAATACAAAAAAA
291259 21/23 AAAAAAAAAAAAAAACAAAAATA
----------------------------------------------------------------------------
Total sequence length......................... 303648
Total number of repeats detected.............. 49
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 31 18 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 31 18 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7292593|gb|AE003485.1|AE003485 Drosophila melanogaster genomic scaffold 142000013386053 section 2 of 30, complete sequence
Position Repeat-length Repeat
41439 20/22 AAAAAAATAAAAAAAAACAAAA
53657 18/20 AAAAAAAACAAAAAAAAACA
63838 22/24 AAAAAAAAAAAAAATAATAAAAAA
80797 24/26 TTTTTGTTTTTTTTTTTTGTTTTTTT
82387 21/23 AAAAAAAAAAAAAGAAAAAACAA
82813 18/20 AAAAATACAAAAAAAAAAAA
88744 18/20 AAAAAAAAGAAAAAAAAAAT
106149 21/23 TTTTTTTTTCGTTTTTTTTTTTT
115725 18/20 AAAAAAAAAAAAAAAATTAA
117834 19/21 GGGGGGGGGGGGGGGGCGTGG
121311 22/24 AAAAAAAAAAAAAAAAACAGAAAA
123824 18/20 AAAAAAAAAAGAAACAAAAA
134515 18/20 TTTTTTGGTTTTTTTTTTTT
138135 18/20 TTTTTTTTTTTTTTTTTGTA
141213 22/24 AAAAAAAAAAAAAAGAAAAGAAAA
141372 19/21 AAAAACAAAAAAAGAAAAAAA
142415 24/26 TTTTTGCTTTTTTTTTTTTTTTTTTT
149784 20/22 TTTTTTTTTTCTTTTTTTTTTG
168497 18/20 TTTTTTTTTTTTTTTTTTGC
174400 25/27 TTTTTTTTGTTTTTTTTTTTTTGTTTT
178479 20/22 AAAAAACAAAAAAAAAAAAAGA
179560 25/27 TTTTTTTTTTGGTTTTTTTTTTTTTTT
181685 19/21 AAAAAAAATAAAAACAAAAAA
183102 28/31 TTTTTTTTTTTTTTTTTTTTTTTTTTTAATA
191550 21/23 TTTTTTTTTTTTCGTTTTTTTTT
200409 28/31 TTTTTTTTTTTGTTTTTTTTTTTTTTGTTTG
222192 21/23 TTTTTTTTTTTTTTTTTTTTTGG
247495 18/20 TTTTTTTTTTTTTTTTTTGA
253678 23/25 TTTTTTTTTTTTTTTTTTTTGTTCT
284485 21/23 AAAAAAAAATACAAAAAAAAAAA
286965 24/26 TTTTTGTTTTTTTTTTTTTTGTTTTT
288297 20/22 AAAAAAAAAAAAAAAAAATACA
288880 19/21 AAAAAAACAAAAAAAAAAAAG
296659 20/22 AAAAAAAAAAAATAAAATAAAA
298037 21/23 GGGGGGGGGGGGGGGGTGGGGTG
----------------------------------------------------------------------------
Total sequence length......................... 302427
Total number of repeats detected.............. 35
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 17 14 2 0
30 to 39 0 2 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 17 16 2 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7292554|gb|AE003484.1|AE003484 Drosophila melanogaster genomic scaffold 142000013386053 section 1 of 30, complete sequence
Position Repeat-length Repeat
16111 24/26 TTTTTTTTTGTTTATTTTTTTTTTTT
21860 23/25 TTTTTTGTTTTTTTTTTTGTTTTTT
23516 20/22 TTTTTCTTTTTTTTTTTTTTTG
40293 25/27 TTTTTTTTTTTTTTTTTTTTTTTTGAT
41476 18/20 TTTTTGTTTTTTTTTTTTTC
41911 19/21 AAAAAAAAAAAAAGAAAAAGA
42316 18/20 AAAAAAAAAAAAACAAAAAT
50205 19/21 TTTTTTTTTCTTTTTTTTTGT
55616 21/23 AAAAAAAAAAAAAAAAAAATTAA
55664 18/20 TTTTTTTTTGTTTTTTTTTG
62686 20/22 TTTTTTGTTTTTTTTTTTTTAT
62727 20/22 TTTTTTTCATTTTTTTTTTTTT
63467 19/21 TTTTTTTTCTTTTTTTTTCTT
63489 21/23 TTTTTTTTTCTTTTTTTTTTTTA
67936 18/20 TTTTTTTTTTTTCTTCTTTT
70397 20/22 AAAAAAAAAACAAAAGAAAAAA
93369 23/25 AAAAAATTAAAAAAAAAAAAAAAAA
115503 19/21 TTTTTTGTTTCTTTTTTTTTT
116298 23/25 TTTTTCTTTTTTTTTTTTTTCTTTT
120157 20/22 AAAAAATATAAAAAAAAAAAAA
149335 19/21 AAAAACAAAAAAAAAAAAACA
159626 19/21 AAAAAAAAAAAAATAAAAAAT
161604 20/22 TTTTTTTCTTCTTTTTTTTTTT
182615 22/24 TTTTTCTTGTTTTTTTTTTTTTTT
185732 18/20 TTTTTTTTTTTATTTTTTTG
205341 18/20 TTTTTTTTTTTTTGGTTTTT
224537 21/23 AAAAAAAAAAAAAAAAAAAAATG
226511 20/22 TTTTTTTTTTCTTTTTTTCTTT
230809 25/27 AAAAAAAAAAAAAAAACAAAAAAAAAG
240169 18/20 AAAAAAAAAAAAAAAAAATG
246413 22/24 TTTTTCTATTTTTTTTTTTTTTTT
263866 20/22 TTTTTTTTTTTTTTTTTTTTGG
265509 20/22 AAAAAAAAAAAAAAACAAACAA
277315 20/22 AAAAAAAAATACAAAAAAAAAA
279342 19/21 AAAAAAAAAAAAAATAAGAAA
282329 18/20 TTTTTTTTTTTTTTTTTGTG
307984 18/20 AAAAAAAAAAAAAAAAAATG
308223 20/22 TTTTTGTTTTTTTTTTTTTTGT
----------------------------------------------------------------------------
Total sequence length......................... 314087
Total number of repeats detected.............. 38
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 15 23 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 15 23 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289319|gb|AE002799.1|AE002799 Drosophila melanogaster genomic scaffold 142000013385566, complete sequence
Position Repeat-length Repeat
899 24/26 AAAAAAAAAAAAAAAAAAAAAAAAGG
937 19/21 AAAAAAAAAAAAAAAAAAATT
5284 19/21 AAAAAAAGAAAAAAAAACAAA
14308 21/23 TTTTTTTTTTATTTTTTTTTTTA
----------------------------------------------------------------------------
Total sequence length......................... 18364
Total number of repeats detected.............. 4
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 3 1 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 3 1 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7288894|gb|AE002936.1|AE002936 Drosophila melanogaster genomic scaffold 142000013385220, complete sequence
Position Repeat-length Repeat
43896 18/20 AAAAACAAAAAAAAAATAAA
----------------------------------------------------------------------------
Total sequence length......................... 48123
Total number of repeats detected.............. 1
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 1 0 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 1 0 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289027|gb|AE003066.1|AE003066 Drosophila melanogaster genomic scaffold 142000013385325, complete sequence
Position Repeat-length Repeat
1318 18/20 TTTTTTTTTTTTTTTAATTT
----------------------------------------------------------------------------
Total sequence length......................... 28380
Total number of repeats detected.............. 1
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 0 1 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 0 1 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7288910|gb|AE003200.1|AE003200 Drosophila melanogaster genomic scaffold 142000013385226, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 14631
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Mono-Nucleotide Repeats in Drosophila melanogaster Chromosome-X Genomic Scaffolds
Minimum repeat length = 20 (allowing maximum 10% mismatch)
Total 88 sequences searched with 21946395 base pairs
Total 3447 repeats covering 71995 / 79065 base pairs
Length distribution of all Mono-nucleotide repeats
--------------------------------------------------------------------------------------------------------
repeat-length 20-29 30-39 40-49 50-59 60-69 70-79 80-89 90-99 100-and-more
no. of repeats 3288 142 17 0 0 0 0 0 0
---------------------------------------------------------------------------------------------------------
Number of repeats
----------------------------------------------------------------------------------------
Sequence A T G C
----------------------------------------------------------------------------------------
gi|7289277|gb|AE002611.1| 216949 bp 5 9 0 1
gi|7316095|gb|AE002620.1| 0 bp 0 0 0 0
gi|7295611|gb|AE003572.1| 79498 bp 3 1 2 2
gi|7295580|gb|AE003571.1| 302246 bp 15 16 0 2
gi|7295563|gb|AE003570.1| 299012 bp 17 14 1 1
gi|7295529|gb|AE003569.1| 292406 bp 11 5 2 2
gi|7295493|gb|AE003568.1| 292926 bp 12 9 0 0
gi|7316092|gb|AE002629.1| 0 bp 0 0 0 0
gi|7295629|gb|AE003574.1| 274456 bp 3 11 0 0
gi|7295620|gb|AE003573.1| 262131 bp 9 7 0 2
gi|7288912|gb|AE002813.1| 2620 bp 0 0 0 0
gi|7289135|gb|AE002822.1| 1638 bp 0 0 0 0
gi|7289301|gb|AE002567.1| 84373 bp 1 3 0 0
gi|7289214|gb|AE002930.1| 1282 bp 0 0 0 0
gi|7289226|gb|AE003341.1| 1242 bp 0 0 0 0
gi|7316107|gb|AE002566.1| 0 bp 0 0 0 0
gi|7291169|gb|AE003451.1| 220623 bp 19 11 0 0
gi|7291133|gb|AE003450.1| 300732 bp 27 19 1 1
gi|7291099|gb|AE003449.1| 299786 bp 14 33 0 1
gi|7291077|gb|AE003448.1| 310399 bp 29 25 0 3
gi|7291054|gb|AE003447.1| 304060 bp 32 25 6 1
gi|7290992|gb|AE003446.1| 303104 bp 31 17 0 0
gi|7290970|gb|AE003445.1| 313965 bp 60 47 2 2
gi|7290927|gb|AE003444.1| 300710 bp 33 27 2 2
gi|7290880|gb|AE003443.1| 302357 bp 30 29 2 0
gi|7290831|gb|AE003442.1| 306267 bp 18 21 0 1
gi|7290819|gb|AE003441.1| 285272 bp 26 26 2 0
gi|7290801|gb|AE003440.1| 342068 bp 38 38 1 1
gi|7290764|gb|AE003439.1| 328089 bp 20 24 1 2
gi|7290724|gb|AE003438.1| 299372 bp 24 23 1 0
gi|7290686|gb|AE003437.1| 305046 bp 22 18 0 1
gi|7290653|gb|AE003436.1| 307017 bp 14 16 0 0
gi|7290600|gb|AE003435.1| 300557 bp 20 11 2 2
gi|7290572|gb|AE003434.1| 302937 bp 39 30 3 2
gi|7290549|gb|AE003433.1| 303258 bp 57 47 1 2
gi|7290523|gb|AE003432.1| 319596 bp 29 47 3 2
gi|7290491|gb|AE003431.1| 311408 bp 39 38 2 2
gi|7290460|gb|AE003430.1| 294292 bp 17 26 0 2
gi|7290438|gb|AE003429.1| 297405 bp 26 27 0 2
gi|7290425|gb|AE003428.1| 301465 bp 30 30 3 1
gi|7290398|gb|AE003427.1| 310909 bp 76 63 2 0
gi|7290382|gb|AE003426.1| 300193 bp 51 55 0 2
gi|7290341|gb|AE003425.1| 300205 bp 21 28 4 5
gi|7290316|gb|AE003424.1| 289090 bp 20 18 2 1
gi|7290252|gb|AE003423.1| 291976 bp 6 12 1 2
gi|7290202|gb|AE003422.1| 300739 bp 7 5 0 0
gi|7290163|gb|AE003421.1| 296497 bp 12 6 0 2
gi|7290119|gb|AE003420.1| 302855 bp 6 6 0 0
gi|7290091|gb|AE003419.1| 299275 bp 11 8 2 3
gi|7290053|gb|AE003418.1| 299970 bp 9 4 0 0
gi|7290018|gb|AE003417.1| 314661 bp 7 6 0 0
gi|7289092|gb|AE002987.1| 71090 bp 0 1 0 0
gi|7289791|gb|AE002991.1| 7017 bp 0 0 0 0
gi|7316106|gb|AE002593.1| 0 bp 0 0 0 0
gi|7293636|gb|AE003513.1| 207355 bp 10 14 0 1
gi|7293579|gb|AE003512.1| 301656 bp 22 13 2 3
gi|7293536|gb|AE003511.1| 343711 bp 14 26 3 1
gi|7293504|gb|AE003510.1| 298477 bp 23 18 3 4
gi|7293467|gb|AE003509.1| 303819 bp 19 13 2 2
gi|7293431|gb|AE003508.1| 300919 bp 16 27 1 0
gi|7293394|gb|AE003507.1| 297165 bp 14 17 0 1
gi|7293355|gb|AE003506.1| 300994 bp 17 20 2 0
gi|7293335|gb|AE003505.1| 314113 bp 15 22 1 2
gi|7293302|gb|AE003504.1| 298536 bp 10 11 2 0
gi|7293251|gb|AE003503.1| 300310 bp 22 31 1 0
gi|7293211|gb|AE003502.1| 301929 bp 10 25 0 0
gi|7293176|gb|AE003501.1| 300191 bp 35 27 1 3
gi|7293108|gb|AE003500.1| 327311 bp 12 11 1 0
gi|7293065|gb|AE003499.1| 301550 bp 20 15 1 1
gi|7293037|gb|AE003498.1| 313384 bp 19 19 1 1
gi|7293000|gb|AE003497.1| 302494 bp 15 12 0 1
gi|7292986|gb|AE003496.1| 299357 bp 16 29 4 0
gi|7292953|gb|AE003495.1| 308307 bp 20 32 0 2
gi|7292942|gb|AE003494.1| 300080 bp 41 48 4 2
gi|7292892|gb|AE003493.1| 308093 bp 16 27 1 2
gi|7292850|gb|AE003492.1| 298939 bp 33 25 3 2
gi|7292821|gb|AE003491.1| 323489 bp 40 36 0 4
gi|7292788|gb|AE003490.1| 302752 bp 36 25 1 0
gi|7292759|gb|AE003489.1| 302915 bp 25 23 2 3
gi|7292734|gb|AE003488.1| 302797 bp 31 34 5 2
gi|7292680|gb|AE003487.1| 301051 bp 19 30 0 0
gi|7292639|gb|AE003486.1| 303648 bp 31 18 0 0
gi|7292593|gb|AE003485.1| 302427 bp 17 16 2 0
gi|7292554|gb|AE003484.1| 314087 bp 15 23 0 0
gi|7289319|gb|AE002799.1| 18364 bp 3 1 0 0
gi|7288894|gb|AE002936.1| 48123 bp 1 0 0 0
gi|7289027|gb|AE003066.1| 28380 bp 0 1 0 0
gi|7288910|gb|AE003200.1| 14631 bp 0 0 0 0
----------------------------------------------------------------------------------------
Total 21946395 bp 1633 1631 91 92
----------------------------------------------------------------------------------------
Repeats >= 40 bp Total> 17 7 10 0 0
----------------------------------------------------------------------------------------
© Division of Biochemical Sciences, National Chemical Laboratory, Pune 411008, INDIA