Mono-Nucleotide Repeats in Genomic Sequences
Mono-Nucleotide Repeats in
Drosophila melanogaster Chromosome-X genomic scaffolds
Genomic Sequence:
gi|7289277|gb|AE002611.1|AE002611 Drosophila melanogaster genomic scaffold 142000013385548, complete sequence
Position Repeat-length Repeat
1826 18/20 TTTTTTTTTTTTTTTTTGCT
10426 18/20 AAAAAAAAAAAAAACAAACA
35713 18/20 TTTTTGTTTTTTTTTTTGTT
56526 21/23 TTTTTTTTTTGTTTTTTTTTTTC
79329 24/26 TTTTTTTTTTTTGTTTTTTTTTTTCT
97269 19/21 TTTTTTTTTTTTTTGTTTTGT
104305 18/20 AAAAAAAACCAAAAAAAAAA
118139 18/20 TTTTTTTTTTTGTTTTTTTA
157226 22/24 TTTTTTTTTTTTTTTTTGTTTCTT
158187 25/27 TTTTTTTTGTTTTTTTTTTTTGTTTTT
169236 19/21 CCCCCCCCCCCCCCCCACCAC
169905 19/21 AAAAAAAAAAAAACGAAAAAA
171460 20/22 AAAAAAAAAAAAAAAAAAGAAG
176064 18/20 TTTTTTTTTATTATTTTTTT
199563 23/25 AAAAAAAAAAACAAAACAAAAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 216949
Total number of repeats detected.............. 15
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 5 9 0 1
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 5 9 0 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7316095|gb|AE002620.1|AE002620 Drosophila melanogaster genomic scaffold 142000013386037, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 0
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7295611|gb|AE003572.1|AE003572 Drosophila melanogaster genomic scaffold 142000013386037 section 5 of 5, complete sequence
Position Repeat-length Repeat
3893 18/20 AAAAAAAAAAAAAAAAATAG
10232 18/20 CCCCCCCCCCCCCCCCCCAG
20250 19/21 TTTTTTTTTTGTTTTTTTTTC
26200 21/23 AAAAAAAAAAAAAAAAAAAATAG
30338 18/20 GGGGGGGGGGGGGGGGTTGG
65319 25/27 AAAAAAAAAACAAAAAAACAAAAAAAA
66613 19/21 CCCCCCCCCCCCCCCCTCCCT
71583 19/21 GGGGGAGGGGAGGGGGGGGGG
----------------------------------------------------------------------------
Total sequence length......................... 79498
Total number of repeats detected.............. 8
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 3 1 2 2
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 3 1 2 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7295580|gb|AE003571.1|AE003571 Drosophila melanogaster genomic scaffold 142000013386037 section 4 of 5, complete sequence
Position Repeat-length Repeat
14880 23/25 TTTTTTTTTTTTTTTTTTTTTTGAT
15087 20/22 TTTTTTTTTTTTGTTTTTTTTG
26008 24/26 AAAAAAAAAAAAAAAAAAAAAAAACG
27065 18/20 AAAAACAAAAAAAAAAAAAG
46189 19/21 AAAAAAAAAAAAAAAAAAATG
46879 22/24 AAAAAAAAAAAAAAATAAATAAAA
47022 18/20 AAAAAAAAAAAAAAAGAATA
57856 18/20 CCCCCCCCCCCCACCCCTCC
62948 20/22 AAAAAAAAAAAAAAAAACAAAT
64977 21/23 TTTTTTTTTTTTTCTTTCTTTTT
70176 19/21 TTTTTCGTTTTTTTTTTTTTT
74839 19/21 AAAAAAAAAAAAAAAAAATAT
79046 18/20 AAAAAAACAGAAAAAAAAAA
80470 18/20 TTTTTTTTTTTTTTTAGTTT
102565 18/20 AAAAAAAAAAAAAAAAATCA
115587 20/22 AAAAAAAAAAAAAAAAAAAATT
116349 19/21 TTTTTTTTTTTTTTTTTTAAT
122864 19/21 TTTTTTGTTTTTTTTTTTGTT
124986 24/26 TTTTTTTTTTATTATTTTTTTTTTTT
128455 19/21 TTTTTTTTTTTTTTTTTTTGG
137855 24/26 CCCCCCCCCCCCCCCCTCCCCCCTCC
139119 18/20 TTTTTTTTTTTTATTTATTT
139551 18/20 AAAAAAAAAAAAAGAAAGAA
150160 21/23 AAAAAAAAACAAAAAAAAACAAA
151273 18/20 TTTTTTTTTTTTTTTGTATT
155424 20/22 TTTTTTTCTTTTTTTTTTTGTT
163663 20/22 AAAAAAAAAAAACAACAAAAAA
171792 26/28 TTTTTTTTTTTTTTTTTTTTGATTTTTT
232628 18/20 TTTTTTTTTTTTTTGTTTTG
258397 21/23 AAAAAAAAAAAAAAAAAAAACAG
260061 26/28 AAAAAAAAAAAAAAGAAAAAAAAAAAAT
288067 19/21 TTTTTTTGTTTTTTTTTTGTT
291632 19/21 TTTTTTTTTTTTTGTTTTATT
----------------------------------------------------------------------------
Total sequence length......................... 302246
Total number of repeats detected.............. 33
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 15 16 0 2
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 15 16 0 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7295563|gb|AE003570.1|AE003570 Drosophila melanogaster genomic scaffold 142000013386037 section 3 of 5, complete sequence
Position Repeat-length Repeat
1032 21/23 TTTTTTTTTTTTTTTTTTGATTT
4618 25/27 AAAAAAAAAAACCAAAAAAAAAAAAAA
15928 18/20 AAAAATAAAAAAAAAAAAAT
26539 21/23 GGGGGGGGGGGGGGGGGGGGGAT
27987 19/21 AAAAAAAAAAAAAAAAAAACG
32929 23/25 AAAAAAAAAAAAAAAAAAAAAATAG
36208 26/28 AAAAAAAGAAGAAAAAAAAAAAAAAAAA
38149 23/25 AAAAAAAGTAAAAAAAAAAAAAAAA
47198 30/33 TTTTTTTGGTTTTTTTTTTTTTTTTTTTTGTTT
54520 20/22 AAAAAAAAAAAAAAAAGAAAAT
56971 23/25 TTTTTTTTTTTTTTTTTTTTTTTAG
57947 19/21 TTTTTTTTTTTTTGTTTTTTG
60293 26/28 AAAAAAAAAAAAATAAATAAAAAAAAAA
76384 22/24 AAAAAAAAAAAAAAAAAAACGAAA
88460 29/32 TTTTTTTTTTTTTTTTTTTTTTTTTGTTTGCT
108187 19/21 TTTTTTTTTTTTTATTTTATT
119912 18/20 AAAAAAAAAAAAAGAAAAAC
120784 21/23 TTTTTTATTTTATTTTTTTTTTT
130688 19/21 AAAAAAAAAAAAAAAACAGAA
138064 18/20 TTTTTTTTTTTGTGTTTTTT
172407 21/23 TTTTTTTTTTTTTTTTTTTGCTT
191526 22/24 TTTTTTTTTTTTTTTTTTTTTTGG
201073 18/20 AAAAAAAAAAAAAAAACAGA
212658 18/20 AAAAAAAAAAAAAAATGAAA
217062 20/22 CCCCCCCCCCCCCCCCCCCCAA
221585 19/21 AAAAAAAAATAAAAAAACAAA
232117 20/22 TTTTTTTTTTTTTTTTGGTTTT
251629 18/20 AAAAAAAAAAAAAACGAAAA
267239 18/20 AAAAAAAAAAAAACAAAATA
275265 19/21 AAAAAAAAAAATAACAAAAAA
277671 18/20 TTTTTTGTTTTTTTTTTTTC
290469 23/25 TTTTTTTTTTTTTTTTTTTTTTTGC
291004 21/23 TTTTTTGTTTTTTTTTTTTTTTC
----------------------------------------------------------------------------
Total sequence length......................... 299012
Total number of repeats detected.............. 33
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 17 12 1 1
30 to 39 0 2 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 17 14 1 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7295529|gb|AE003569.1|AE003569 Drosophila melanogaster genomic scaffold 142000013386037 section 2 of 5, complete sequence
Position Repeat-length Repeat
43734 18/20 AAAAAAAAAATAAAAAAAAT
47908 21/23 CCCCCCCCCCCCCCCCCCCCACG
109864 20/22 AAAAAAAAAAAAAAACAGAAAA
120203 23/25 AAAAAAAAAAAAAAACAAAACAAAA
122407 20/22 TTTTTTTGTTTTTTTTTTTTTG
126639 28/31 AAAAAAAAAAAAAAAAAAAAAAACCAAAAGA
127937 26/28 AAAAAAAAAAAAAAAAAAAAAAAAAAGC
136301 22/24 TTTTTTTTCTTGTTTTTTTTTTTT
141315 26/28 AAAAAAAAAAAAAAAAAATAAATAAAAA
149376 18/20 GGGGGGGGGGGGGGGCGGCG
154573 25/27 TTTTTTTATTTTATTTTTTTTTTTTTT
173930 27/30 AAAAAAAAAAAAAAAAAAAAAAAAAACGAC
175167 21/23 TTTTTTTTTTTTTTTCTTTTTCT
193314 18/20 CCCCCACCCCCCCCTCCCCC
201705 18/20 TTTTTATTTTTTTTTTTTGT
203958 23/25 GGGGGGGGGGGGGGGGAGAGGGGGG
215187 20/22 AAAAAAAAAATAAAAATAAAAA
216771 22/24 AAAAAAAAAAAAAAAAAAAAATAC
223644 18/20 AAAAAAAAATAAAAATAAAA
227941 19/21 AAAAAAAAAAAAAAAAAAATG
----------------------------------------------------------------------------
Total sequence length......................... 292406
Total number of repeats detected.............. 20
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 9 5 2 2
30 to 39 2 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 11 5 2 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7295493|gb|AE003568.1|AE003568 Drosophila melanogaster genomic scaffold 142000013386037 section 1 of 5, complete sequence
Position Repeat-length Repeat
31038 27/30 AAAAAAAAAAAAAAAAAAAAAAAAAATACC
31266 18/20 AAAAAAAAAAAATAATAAAA
72061 20/22 TTTTTTTTTTTTTTGTTGTTTT
93235 20/22 AAAAAAAAAAAAAAAAACAAAC
98850 20/22 AAAAAACAAAACAAAAAAAAAA
99720 18/20 AAAAAAAAAAAAAAAGAAAC
106925 25/27 TTTTTTTATTTTTTTTTATTTTTTTTT
112878 23/25 TTTTTTTTTTTTTATTTTTTTTTTG
113456 25/27 TTTTTTTTTTTTTTTTTTTTTTTTTGA
136732 18/20 TTTTTTTCTATTTTTTTTTT
139792 20/22 AAAAAACAAAAAAAAATAAAAA
142707 21/23 AAAAAACAAAAAAAACAAAAAAA
146158 24/26 TTTTTTTTTTTTTGTTTTTTTTTCTT
152162 19/21 AAAAAAAAAAAACAAAAAACA
217458 21/23 TTTTTTGTTTTTTTTTTTTTTTA
266136 26/28 AAAAAAAAACCAAAAAAAAAAAAAAAAA
267144 24/26 TTTTTTTTTTTTTTTTTTTGTGTTTT
272140 21/23 AAAAAAAAAAAAAAATACAAAAA
280964 21/23 TTTTTTTTTTTTTTTTTTTTGGT
281636 23/25 AAAAACAAAAAAAAAAAAAAAAAAT
284179 18/20 AAAAAAAAAAAATAAATAAA
----------------------------------------------------------------------------
Total sequence length......................... 292926
Total number of repeats detected.............. 21
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 11 9 0 0
30 to 39 1 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 12 9 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7316092|gb|AE002629.1|AE002629 Drosophila melanogaster genomic scaffold 142000013386033, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 0
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7295629|gb|AE003574.1|AE003574 Drosophila melanogaster genomic scaffold 142000013386033 section 2 of 2, complete sequence
Position Repeat-length Repeat
25795 24/26 TTTTTTTTTTTTTTTTTTTTTTTATA
35817 21/23 TTTTTTTTATTTTTTTTTGTTTT
75470 22/24 TTTTTTTTTTTTGTTTTTTTTTTG
76509 31/34 TTTTTTTTTTTTTGTTTTTTTTTTTTTTTTGTTG
89684 27/30 TTTTTTAATTTTTTTTTTTTTTTTTTTTTG
115408 18/20 TTTTTTTTATTTTTTATTTT
137620 26/28 TTTTTTTTTTTTTTTTTTTTATTTTTTA
158882 22/24 AAAAAAAAAAAAAAAAAAAACCAA
178119 18/20 AAAAACAATAAAAAAAAAAA
191623 20/22 AAAAAAAAAAAATAAAAAAAAT
229758 26/28 TTTTTTTTTTTTTTTTTTTTTTTTTGGT
239193 19/21 TTTTTTTTTTTTTTTTGTATT
245716 24/26 TTTTTTTTTTTGTTTTTTTTTTTGTT
246542 20/22 TTTTTTTTTTTTTTTTTTTGTG
----------------------------------------------------------------------------
Total sequence length......................... 274456
Total number of repeats detected.............. 14
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 3 9 0 0
30 to 39 0 2 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 3 11 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7295620|gb|AE003573.1|AE003573 Drosophila melanogaster genomic scaffold 142000013386033 section 1 of 2, complete sequence
Position Repeat-length Repeat
34998 25/27 AAAAAAAAAAAAAAAAAAAAAAAAACC
70349 21/23 AAAAAAAAAAACAAAAACAAAAA
74950 18/20 AAAAAAAAAAAAAAACAAAT
103821 25/27 TTTTTTTTTTTTTTTTTTTTTTTTGTC
111112 21/23 CCCCCCCCCCCCCCCCCCCTTCC
121638 19/21 CCCCCTCCCCCCCCCCCCCTC
123711 21/23 TTTTTGTTTTTTTTTTTTTTTTG
132498 23/25 AAAAAAAAAAAAAAAAAAAAAACAG
134834 18/20 AAAAAAAAAAACAAAACAAA
134933 19/21 TTTTTTTTTTTTTTTGGTTTT
135607 18/20 AAAAACAAAAAAAAAAACAA
152742 25/27 TTTTTTTTTTTTTTTTTTTTTTACTTT
199635 18/20 TTTTTTTTTTTTTTTTTTGC
208111 21/23 TTTTTTTTTTTTTTTTTGTTTTG
211756 23/25 TTTTTGTTTTCTTTTTTTTTTTTTT
229100 23/25 AAAAAAAAAAAAAAAACAAAAAATA
230149 20/22 AAAAAAAAAAAAATAAATAAAA
233740 23/25 AAAAAAAAAAAAAAAAAAAAACAAG
----------------------------------------------------------------------------
Total sequence length......................... 262131
Total number of repeats detected.............. 18
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 9 7 0 2
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 9 7 0 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7288912|gb|AE002813.1|AE002813 Drosophila melanogaster genomic scaffold 142000013385227, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 2620
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289135|gb|AE002822.1|AE002822 Drosophila melanogaster genomic scaffold 142000013385417, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 1638
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289301|gb|AE002567.1|AE002567 Drosophila melanogaster genomic scaffold 142000013385554, complete sequence
Position Repeat-length Repeat
20078 20/22 TTTTTTTGTTTTTTTTTGTTTT
44812 24/26 AAAAAAAAAAATAAAAAAAAAACAAA
56901 26/28 TTTTTTGGTTTTTTTTTTTTTTTTTTTT
76871 19/21 TTTTTTTTTTTTTTTTGTATT
----------------------------------------------------------------------------
Total sequence length......................... 84373
Total number of repeats detected.............. 4
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 1 3 0 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 1 3 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289214|gb|AE002930.1|AE002930 Drosophila melanogaster genomic scaffold 142000013385493, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 1282
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7289226|gb|AE003341.1|AE003341 Drosophila melanogaster genomic scaffold 142000013385503, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 1242
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7316107|gb|AE002566.1|AE002566 Drosophila melanogaster genomic scaffold 142000013386054, complete sequence
Position Repeat-length Repeat
----------------------------------------------------------------------------
Total sequence length......................... 0
Total number of repeats detected.............. 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7291169|gb|AE003451.1|AE003451 Drosophila melanogaster genomic scaffold 142000013386054 section 35 of 35, complete sequence
Position Repeat-length Repeat
806 25/27 TTTTTTTTTTGTTTTTTTTTTTTTTTG
2860 21/23 TTTTTTTTTTTGATTTTTTTTTT
11625 19/21 TTTTTTTTTTTCTTTTTTTTC
12406 27/30 TTTTTTTTTTTTTTTTTTTTTTTTAATTTG
13193 25/27 AAAAAAAAAAAAAAAAAAAAAAAACCA
13403 25/27 AAAAAAAAAAAAAAAAAAAAAAAACCA
17274 23/25 TTTTTGTTTTTTTTTTTTTTTTTAT
22181 18/20 TTTTTTTTTTTGGTTTTTTT
22890 20/22 AAAAAACCAAAAAAAAAAAAAA
22914 19/21 AAAAAATAAAAAAAAAAAAAG
26469 28/31 AAAAAAAAAAAAAAAAAAAAAAAAAAACCAC
32141 20/22 AAAAATTAAAAAAAAAAAAAAA
64507 18/20 AAAAAAAAAAAACAAAAACA
92885 21/23 TTTTTTCTTTTTTTTTTTTTTTG
96419 19/21 AAAAAAAAAAGAAAAACAAAA
118257 23/25 AAAAAAAAAAAAAACAAAAACAAAA
121041 22/24 AAAAAACCAAAAAAAAAAAAAAAA
121742 18/20 AAAAAAAAAAAAAAAAAACT
122332 19/21 AAAAAAAAAAAAAAAGAAAGA
123634 23/25 AAAAAAAAAAAAAAAAAAATGAAAA
127313 18/20 AAAAAAAAAGAAAGAAAAAA
141163 23/25 TTTTTATTATTTTTTTTTTTTTTTT
142940 25/27 TTTTTGTTTTTTGTTTTTTTTTTTTTT
146614 20/22 TTTTTTTTTTTTTTTGTTTTTG
157433 21/23 AAAAAACCAAAAAAAAAAAAAAA
166150 22/24 AAAAAAAAAAAAAAAAGAAAGAAA
167876 21/23 AAAAAAACAAAAAAAAAAAAAAG
175738 19/21 TTTTTCGTTTTTTTTTTTTTT
201997 26/28 AAAAAAAAAAAAAAAAAAAATAAATAAA
202694 19/21 AAAAATAAAAAAAAAGAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 220623
Total number of repeats detected.............. 30
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 18 10 0 0
30 to 39 1 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 19 11 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7291133|gb|AE003450.1|AE003450 Drosophila melanogaster genomic scaffold 142000013386054 section 34 of 35, complete sequence
Position Repeat-length Repeat
8205 18/20 GGGGGGGGGGGGGGGGGGCT
14529 23/25 AAAAAAAAAAAAAAAAACAAAAACA
17650 19/21 AAAAAAAAAAAAAAAAACAAT
43463 22/24 TTTTTTTTTTGTTTGTTTTTTTTT
46707 18/20 AAAAAAAAAAAAAGAAGAAA
50208 24/26 TTTTTTTTTTTGTTCTTTTTTTTTTT
52912 21/23 TTTTTTTCTTTTTCTTTTTTTTT
54073 19/21 TTTTTTTGTTTTTTTTTTTTG
57163 19/21 TTTTTTTTTTTTTTTTCATTT
58205 19/21 AAAAAAACAAAAAAAAAACAA
60586 24/26 AAAAAAAAAAAAAAAAAAAAAATAAC
65815 21/23 AAAAAAAGCAAAAAAAAAAAAAA
66885 24/26 AAAAAAAAAAAAAAAAAAAAAAAGGA
68522 22/24 AAAAAAAAAAATAAACAAAAAAAA
69654 42/46 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAGT
70615 27/30 TTTTTTCTATTTTTTTTTTTTTTTTTTTTC
73266 18/20 TTTTTTTTTTCTTCTTTTTT
87116 20/22 AAAAAAAAAAAAAAACAAAAAG
87266 19/21 TTTTTTTTTTTTTTTTTTGTG
89892 18/20 TTTTTTTTTTTTTTTTTTAA
91340 24/26 AAAAAACAAAAAAAAAAAAAAAAAGA
91982 23/25 AAAAAAAAAAAAAAAAAAAAAACCA
92251 21/23 AAAAAAAAAAAAAGAAAGAAAAA
92287 19/21 AAAAAAAAAAGAAAACAAAAA
99607 22/24 TTTTTTTTATTTTTTTTTTTATTT
101296 18/20 TTTTTTTTGTTTTTTTTTTG
101996 19/21 TTTTTTTTTTTGTTTTTATTT
136387 20/22 AAAAAAAAAACAAAAAAAAGAA
141598 21/23 AAAAAAAAAAAAAGAAAATAAAA
146277 18/20 AAAAAAAAAAAAAAAAAATG
150391 21/23 AAAAAAAAAAGAAATAAAAAAAA
153592 18/20 AAAAATAAAAAAAATAAAAA
161217 24/26 AAAAAAAAAAAAAAAAAAAAAAAAGG
177265 22/24 AAAAACAAAAAAAAAAAAACAAAA
186509 29/32 TTTTTTTTTTTTTTTTTTTTTTTGTTTTGTTC
194410 25/27 AAAAAAAAAACAAAAAAAAAAAAAAAC
194662 18/20 AAAAACAAAAAAAAAAATAA
207394 19/21 AAAAAAAAAAAAAACAAAATA
207702 20/22 TTTTTTTTTTTTTTTCTTCTTT
210763 18/20 AAAAAAAACAAAAAAAAAAT
212194 18/20 TTTTTTTTTGGTTTTTTTTT
273513 26/28 AAAAAAAAAAATAAAAATAAAAAAAAAA
275119 19/21 TTTTTTTTTTTTTTTTTTTGG
279712 20/22 TTTTTTTTTTTTTTTTTGTTCT
282693 19/21 CCCCCCCCCCCCCCCCCCATC
290600 18/20 AAAAAAAAAGAAAAAATAAA
299750 24/26 AAAAAAAAAAAAAAAAAAAAAAACAG
300575 18/20 TTTTTTTTTTTTTTTTTGGT
----------------------------------------------------------------------------
Total sequence length......................... 300732
Total number of repeats detected.............. 48
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 27 16 1 1
30 to 39 0 2 0 0
40 to 49 0 1 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 27 19 1 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7291099|gb|AE003449.1|AE003449 Drosophila melanogaster genomic scaffold 142000013386054 section 33 of 35, complete sequence
Position Repeat-length Repeat
10753 19/21 TTTTTTGTCTTTTTTTTTTTT
10911 22/24 AAAAAAAAAAGAAAAACAAAAAAA
11983 18/20 TTTTTTTTTTTGTTTTTTTG
26977 23/25 TTTTTTTTTTTTTTTTTTTGTGTTT
27232 19/21 TTTTTTCTTTCTTTTTTTTTT
29236 19/21 TTTTTTTTGTTTTTTTTTTTA
40329 18/20 AAAAAAAAAAAAAAACTAAA
42906 26/28 AAAAAAAAAAAAAAAAAAGAAAAAAACA
43530 22/24 TTTTTTTTCTTTTTTTGTTTTTTT
50901 18/20 TTTTTTTTTTTTTTTTTGCT
69150 26/28 TTTTTTTTTTTTTTTTGTTTGTTTTTTT
69923 21/23 AAAAAGAAAAAAAAGAAAAAAAA
71241 30/33 TTTTTTTTTTTTTTTTTTTTTTGTTATTTTTGT
75245 19/21 AAAAAGAAAAGAAAAAAAAAA
79627 20/22 TTTTTTTTTATTTTTTTTTTTG
80361 20/22 TTTTTTTTATTTTTCTTTTTTT
81647 24/26 AAAAAAAAAAAAAAAAACAAAAAATA
98294 22/24 TTTTTTTTTTTTTTTGTTTTTTGT
102518 22/24 AAAAAAAAAAAACAAAAACAAAAA
104898 20/22 TTTTTTTTTTTTTTTTTTGGTT
106242 19/21 AAAAAAAAAAAAAAAAAACAT
109324 22/24 TTTTTTTTTTTTTTTTTTTTTGGT
112246 23/25 TTTTTTCTTCTTTTTTTTTTTTTTT
115119 18/20 AAAAAAAAAACAAAGAAAAA
121511 21/23 TTTTTTTTTTTTTTTTTTGTATT
127835 21/23 TTTTTTGTTTTTTTTTTTTTTTA
129178 23/25 TTTTTTTTTTTTTTTAATTTTTTTT
146975 19/21 TTTTTTTTATTTTTTTATTTT
158460 18/20 TTTTTTTTTTTTTGTTTTTC
179961 19/21 TTTTTTTTTTCGTTTTTTTTT
185720 20/22 TTTTTTTTTTTTTTTTTTTTCG
186957 22/24 TTTTTTTTTTATTTTATTTTTTTT
188258 19/21 TTTTTTTTTTTTTTTTGTTTG
196892 20/22 TTTTTTTTTTTTTTTTTATTTA
202048 26/28 AAAAAAAAAAAAAAAAAAAAAAAAACCA
209543 21/23 TTTTTGTGTTTTTTTTTTTTTTT
212836 19/21 TTTTTTTTTTTTTTTTGTTTA
213140 18/20 TTTTTTTTTGTTTTTTTGTT
220798 18/20 AAAAAATAAAAAAAAAAAAC
222166 20/22 AAAAACAAAAAACAAAAAAAAA
235913 18/20 TTTTTTTTTTTTTTTTTTGC
245897 25/27 AAAAAAAAAAAAAAAACAAAAATAAAA
251125 18/20 CCCCCACCCCCCCCCCTCCC
257278 20/22 TTTTTTTTTTTTATTTTTTTTG
265031 19/21 TTTTTTTTTCTTTTTTTTTTC
286621 19/21 TTTTTTTTTTTTTTTGTTTGT
292837 23/25 TTTTTTTTTTGTTTTGTTTTTTTTT
295140 18/20 AAAAAATACAAAAAAAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 299786
Total number of repeats detected.............. 48
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 14 32 0 1
30 to 39 0 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 14 33 0 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7291077|gb|AE003448.1|AE003448 Drosophila melanogaster genomic scaffold 142000013386054 section 32 of 35, complete sequence
Position Repeat-length Repeat
22913 20/22 AAAAAAAAAATAAAAAAAAAAC
68378 23/25 TTTTTTTTTTTTTAATTTTTTTTTT
68617 21/23 TTTTTTTTTTTTTTTTTTTTTGC
69824 22/24 AAAAAAAAAAAAAAAAAAACCAAA
75499 19/21 AAAAAAATAAAAATAAAAAAA
75640 18/20 AAAAAAAAAAAATAACAAAA
77705 19/21 TTTTTTCTTTTTTTTTTTTTG
77873 21/23 TTTTTTTTTTCTTTCTTTTTTTT
78728 20/22 TTTTTTCCTTTTTTTTTTTTTT
80374 19/21 TTTTTTTTTTGTTTTTTTTTC
80542 20/22 TTTTTTTTGTGTTTTTTTTTTT
80742 18/20 AAAAAAAAAAAAAAGACAAA
82413 19/21 AAAAAGAAAAAGAAAAAAAAA
85926 18/20 CCCCCCCCCCCCCCTCCACC
91522 18/20 AAAAAAAATAAAAAAAAAAT
93478 21/23 TTTTTTTGTTGTTTTTTTTTTTT
95738 18/20 TTTTTTTTTTTCTTTTTTTC
97897 22/24 TTTTTTTTTTTTTGTTTTTTTTTG
103193 18/20 AAAAAAAAAGAAAAAAAATA
106807 20/22 TTTTTATTATTTTTTTTTTTTT
109285 21/23 AAAAAAAAAAAAAAATAATAAAA
112325 20/22 TTTTTCTTTTTATTTTTTTTTT
117094 20/22 TTTTTTTTTTTGTATTTTTTTT
117269 22/24 AAAAAAAAAAAAAAAAAAATAATA
117663 21/23 AAAAACAAAAAAAAAAAATAAAA
120080 18/20 TTTTTTTTTTTTTTTTGATT
122192 22/24 AAAAAAAAAACCAAAAAAAAAAAA
126830 18/20 AAAAAAAAAAAAAAAAGGAA
127094 26/28 TTTTTTTTTTTTTTTTTTTTTTTCGTTT
127362 19/21 TTTTTTTTTTTTATTATTTTT
131646 20/22 AAAAAAAAAGAAATAAAAAAAA
132459 19/21 AAAAAAAAAAACTAAAAAAAA
136862 19/21 AAAAAGTAAAAAAAAAAAAAA
138427 21/23 TTTTTTTTTCTTTTTTTTTTTGT
148530 24/26 AAAAAAAAAAAAAAAGAAAAGAAAAA
153909 22/24 TTTTTTTTTTTTTTTTTTTTATTA
168683 19/21 TTTTTTTCTTGTTTTTTTTTT
174187 18/20 AAAAAAAAAAAAAAACAACA
176107 21/23 CCCCCCCCCCCTCCCCCCTCCCC
179682 22/24 TTTTTTTTTTTTTTTTTGTATTTT
182485 20/22 AAAAAACAAAAAACAAAAAAAA
188462 20/22 AAAAAATACAAAAAAAAAAAAA
194678 21/23 AAAAAAAAAAGAGAAAAAAAAAA
213581 25/27 TTTTTTTTTTTTTTTTTTTTTTGCTTT
219775 19/21 AAAAAAAAAAAAAACCAAAAA
219931 19/21 AAAAAAAAAAAAACAAACAAA
223556 18/20 TTTTTTTTTTTTTTTTGTTG
235259 25/27 AAAAAAAAAAAAAAAAAAAAAACAAAT
247994 18/20 TTTTTTTTTTTTTTCTTTGT
253272 22/24 AAAAACAAAAAAAAAAAAAAAGAA
254529 19/21 AAAAAAAAAAAAAAAAAAGCA
260665 18/20 AAAAAAAAAAAAAATATAAA
265090 18/20 TTTTTTTTTTTTTTTTGTTA
279628 21/23 CCCCCCCCCCCCCCCCCCCCACA
299006 19/21 AAAAAAAAAAAAAGAAAAGAA
303905 23/25 AAAAAAAAAAAAAAAAAAACAAGAA
307149 19/21 TTTTTTTTTTATTTTTTTATT
----------------------------------------------------------------------------
Total sequence length......................... 310399
Total number of repeats detected.............. 57
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 29 25 0 3
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 29 25 0 3
----------------------------------------------------------------------------
Genomic Sequence:
gi|7291054|gb|AE003447.1|AE003447 Drosophila melanogaster genomic scaffold 142000013386054 section 31 of 35, complete sequence
Position Repeat-length Repeat
10568 18/20 TTTTTTTTTTTTTTTTTAAT
10706 22/24 AAAAAAAAAAAGAAAAAGAAAAAA
13332 21/23 AAAAAAAAAAAAAAAAACTAAAA
14847 18/20 AAAAAAAAAAAAAAAAAGAG
16557 24/26 AAAAAAAAAAAAAGAAAAAAAAATAA
17902 23/25 AAAAAAAAAAAAAAAAAAAAACAAG
18749 18/20 GGGGGGGGGGGGGGGGGGTC
23625 23/25 AAAAAAAAAAAAAAAATAAAAAAAC
24414 18/20 TTTTTTTTTTTTTGTTTTTA
42906 21/23 TTTTTTATTTTTTTTTTTTATTT
49583 18/20 TTTTTTTTTTGTTTTTTTCT
54008 23/25 AAAAAAACAAAAAAAAAAAAATAAA
59653 22/24 AAAAAAAAAAAAAAATAAAAAGAA
67550 21/23 AAAAAAAAAAAGAAAAAAAAGAA
70433 18/20 TTTTTTTTTTTTTTGCTTTT
72430 18/20 TTTTTTTTTTTTTTTCCTTT
72854 30/33 AAAAAAAAAAAAAAAAAATAAAAAAAAAATGAA
78095 28/31 AAAAACAAAAAAAAAAAAAAAACAAAAAAAC
79404 20/22 TTTTTTTTTTTTTTCATTTTTT
83072 21/23 TTTTTTCTTTTTTTTTTTTTTTG
86934 23/25 TTTTTTTTTTTTTTTTTTTTGTTCT
89104 20/22 AAAAAAAAAAAAAAAAATGAAA
99692 19/21 AAAAAAAAAAAAAAAAACATA
108877 18/20 TTTTTTTTTTTTTTTTGTTG
114269 18/20 AAAAAAAAAAAAAAAAAATG
116202 22/24 TTTTTTTTTTTTTTTTTTTCTTGT
120521 20/22 AAAAAAAAAAAAAAAAAAACAC
122715 21/23 AAAAAAAAAAAAATGAAAAAAAA
124034 18/20 AAAAAAAAAAAACAAGAAAA
129162 19/21 GGGGGGGGGGGGGGGGGCGGT
134889 19/21 GGGGGGGGGGGGGGGGTGGGT
138226 18/20 TTTTTTTTTTTTTTTTTTGG
139474 22/24 AAAAACCAAAAAAAAAAAAAAAAA
140645 21/23 AAAAAAAAAAAAAAAAAAGAATA
141106 25/27 AAAAAAAAAAAAAAAAAAAAAAAAAGC
141917 22/24 TTTTTCTTTTATTTTTTTTTTTTT
143862 23/25 TTTTTTTTTTCTTTTTTTTTTCTTT
144950 19/21 TTTTTTTTTTTTCTTTTTTTA
147041 21/23 AAAAAAAAATAAAATAAAAAAAA
147598 26/28 TTTTTTTTTATTTATTTTTTTTTTTTTT
147801 19/21 AAAAAAAAAAAAAAACAGAAA
148392 18/20 GGGGGGGGGGGGGAAGGGGG
148646 19/21 TTTTTTTTTTTTGTGTTTTTT
149702 29/32 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGG
152711 18/20 GGGGGGGGGGGGGGGGGGAC
156228 24/26 TTTTTTTTTTTTTATTCTTTTTTTTT
164079 19/21 TTTTTTTTTTTTTTTTTCGTT
165936 20/22 CCCCCCCCCCCCCCCCCCCACG
171344 22/24 TTTTTTTTTTTTTTTTTTTTTTGA
171865 20/22 TTTTTTTTTCTTTTTTTTGTTT
174550 28/31 AAAAAAAAAAAAAAAAAAAAAAAAAAATACT
176336 24/26 TTTTTTTTTTTTTTTTTTTTTTGTTG
177600 18/20 GGGGGGGGGGGGGGGCGTGG
181772 18/20 AAAAAAAAAAGAAAGAAAAA
184407 20/22 TTTTTTTTTTTTTTTTTTTGCT
195750 22/24 AAAAAAAAAACAAAAAACAAAAAA
204810 23/25 AAAAATAAAAAAAAAAAAAAAAAAT
206916 19/21 AAAAAATAAAAAAAAAAAGAA
212768 21/23 TTTTTTTTTTTTTTTTTTTTGAT
215752 18/20 AAAAACCAAAAAAAAAAAAA
265088 20/22 AAAAAAAAAAACAAAAAAAGAA
284414 20/22 AAAAAAAAAAGAAGAAAAAAAA
293945 19/21 AAAAAAAAAAACAAAACAAAA
300476 18/20 AAAAAAAAAAAAAAACATAA
----------------------------------------------------------------------------
Total sequence length......................... 304060
Total number of repeats detected.............. 64
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 29 24 6 1
30 to 39 3 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 32 25 6 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290992|gb|AE003446.1|AE003446 Drosophila melanogaster genomic scaffold 142000013386054 section 30 of 35, complete sequence
Position Repeat-length Repeat
448 20/22 AAAAAAAAAAAACAAAAAAAAC
3026 21/23 AAAAAAAAAAAAAAAGAAAAAAC
3294 20/22 TTTTTTTTTCTGTTTTTTTTTT
7876 18/20 TTTTTTTTTTTTTTTTTTAA
12857 20/22 AAAAAAACCAAAAAAAAAAAAA
29238 19/21 AAAAAAAAAATAAAACAAAAA
32364 22/24 TTTTTTTTTTTTTTTTTTTTCATT
32598 18/20 TTTTTTGTGTTTTTTTTTTT
34471 22/24 TTTTTTTTTTTTTTTTTGTTTTTC
38648 24/26 AAAAAAAAAAAAAAAAAAAAAAACAG
42302 21/23 AAAAAAAAAAAAAAAAACAAACA
43181 20/22 AAAAAAAAAAGAAAAAAATAAA
43771 19/21 AAAAAAAAATAAAAAAATAAA
44291 19/21 AAAAAAAAAAAAATTAAAAAA
44453 21/23 TTTTTTTTTTTTTTTTTTTTGGT
46228 21/23 AAAAAAACAAAAAAAAAAAAACA
63847 19/21 AAAAAAAAAAAAAGAAACAAA
64502 18/20 TTTTTTCTTTTTTTTTTTGT
66546 23/25 TTTTTTGTTTTGTTTTTTTTTTTTT
90281 19/21 AAAAAAGTAAAAAAAAAAAAA
90943 22/24 AAAAAAAAAATAAAAAAAAAAATA
91102 24/26 TTTTTTTCTTTTTTTTTTTTTTTTTG
92432 18/20 TTTTTTTTTTTTTGTTTTTG
108101 22/24 AAAAAAATAAAAAAAAAAAAAGAA
115217 18/20 TTTTTATTATTTTTTTTTTT
120047 22/24 TTTTTTATTTTCTTTTTTTTTTTT
136787 27/30 TTTTTTTCGTTTTTTTTTTTTTTTTTTTTA
139506 19/21 AAAAAAAAAAAAAAAACGAAA
144861 20/22 AAAAAAAAAAAACAAAACAAAA
145141 20/22 AAAAAAAAAAAAAAACTAAAAA
146472 21/23 TTTTTTTTTTGTTTTTTTTTTGT
147259 19/21 AAAAAAAAAAAAGAAGAAAAA
153627 20/22 AAAAAAAAAAAACGAAAAAAAA
155964 23/25 AAAAAAAAAAAAACAAAAAACAAAA
156676 23/25 AAAAAAAAAAAAAAACAAAAACAAA
158690 18/20 TTTTTTTTTTTTTTTATATT
179700 18/20 AAAAAATAAAAAAAAATAAA
181920 18/20 AAAAAAAAAACAGAAAAAAA
185013 20/22 TTTTTTGTTTTTTTTTTTTTTA
217807 18/20 AAAAAAAAAAAAAAAAAGTA
255025 18/20 TTTTTTTTTTTTTTCTTATT
257360 20/22 AAAAAAATAAAAAAAAAAATAA
258253 24/26 AAAAAAAAACAAAAAAAAAAAAGAAA
260762 19/21 AAAAAAAAAAACAAAAAAAAG
267483 18/20 AAAAAAATAAAAAAAAAAAG
274660 21/23 AAAAAAAAAAAAAGAAAAAAAAG
292270 20/22 AAAAAAAAAAAAAAAAAACAAT
292708 22/24 AAAAAAATAAAATAAAAAAAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 303104
Total number of repeats detected.............. 48
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 31 16 0 0
30 to 39 0 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 31 17 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290970|gb|AE003445.1|AE003445 Drosophila melanogaster genomic scaffold 142000013386054 section 29 of 35, complete sequence
Position Repeat-length Repeat
5230 21/23 TTTTTTTTTTTTCTTTTTTGTTT
7843 20/22 AAAAAAAAAAAAAGAAAAAATA
12207 21/23 TTTTTTTTTGTTTTTTTTTTTTG
23888 19/21 AAAAAAAAAAAAAAAAAAGGA
24067 20/22 AAAAAAAAAAAAAAAGAAAAAT
40151 19/21 TTTTTTCTTTTCTTTTTTTTT
40657 18/20 TTTTTTTTTTTGTGTTTTTT
42528 20/22 TTTTTTTTTTTCATTTTTTTTT
43114 18/20 TTTTTTTTTTTTTCATTTTT
44285 19/21 AAAAAAAAAAAAAAAATATAA
46750 19/21 TTTTTTTTTTTTTTTTTGTTC
49519 20/22 AAAAAAAAAAAAAAAAAAAACT
52938 20/22 TTTTTTTTTTTTTTTCTTTCTT
53583 19/21 AAAAAAAAAAAAAAAGAAACA
58822 20/22 AAAAAACCAAAAAAAAAAAAAA
60451 19/21 TTTTTTTTTTTTTGGTTTTTT
61169 21/23 TTTTTTGTTGTTTTTTTTTTTTT
62435 24/26 AAAAAAAAGCAAAAAAAAAAAAAAAA
65945 25/27 AAAAACAAAAAAAAAATAAAAAAAAAA
67823 21/23 TTTTTTTGTTTTTTTTTTTTTGT
67979 19/21 AAAAACAAAAAAAAAAAAAGA
68347 22/24 TTTTTTGTTTTTTTTTTTTTTTGT
71635 24/26 AAAAAAAAAAAAAAAAAATTAAAAAA
73417 39/43 TTTTTTTTTTATTTTTTTTTTTTTTTTTTTTGTTTTATTTTAT
75697 19/21 AAAAAAAAAAACAAGAAAAAA
76386 21/23 TTTTTTTATTATTTTTTTTTTTT
76623 20/22 AAAAAAAAAAAAAAGAAATAAA
77281 23/25 AAAAAAAAAAAAAAAAAACAATAAA
78417 19/21 TTTTTTTTTCTTTCTTTTTTT
83727 19/21 AAAAAAAAAAAAAAATAATAA
86595 23/25 TTTTTTTTTTTTTTTTTTTTTTTGG
92017 18/20 AAAAACAAAAAAAAAAAAGA
92780 20/22 TTTTTTTTTTTTGCTTTTTTTT
95067 21/23 AAAAAAAAAAAAAAAAAAAAATG
96858 20/22 GGGGGGTGGGGGGGGGGGGGGT
108847 19/21 AAAAAAAAAAAAACAAAAAAG
109352 20/22 AAAAAAAAAAAAAAAACCAAAA
109594 18/20 TTTTTTTTTTTTTTTGTTTC
111453 21/23 AAAAAAAAAAACAAAATAAAAAA
116199 20/22 TTTTTTCTTTTTTTTTTTATTT
118734 21/23 AAAAAATAAAAAAAAAAAAAAAG
125281 19/21 AAAAAAAAATAAGAAAAAAAA
125856 19/21 AAAAAAAATGAAAAAAAAAAA
126268 22/24 AAAAACAAAAAAAAAAAAAACAAA
127586 18/20 TTTTTTTTTTTTATTTTTTG
127829 18/20 AAAAAAAATGAAAAAAAAAA
130006 20/22 AAAAAAAGAAAAAAAAAACAAA
131956 20/22 AAAAAAAAAAACAAAAAAATAA
133244 18/20 TTTTTTGTTTTTTTTTTTTA
135261 19/21 AAAAAAAACAAAAAAAAACAA
137418 24/26 TTTTTATTTATTTTTTTTTTTTTTTT
140253 29/32 TTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTC
143544 18/20 AAAAAAAATAATAAAAAAAA
144708 24/26 TTTTTTTTTTTTTTTTTTTTGGTTTT
151103 22/24 TTTTTTTTTTTTTTTTCTTTTTTG
156130 18/20 TTTTTTCTTTTTTTCTTTTT
160946 18/20 AAAAAAAAAAAAAAGAAAAG
162296 18/20 AAAAAAAAAAAAAAAGAAAT
165614 18/20 AAAAAATAAAAAAAAAAAAC
165959 18/20 TTTTTTTGTTGTTTTTTTTT
169591 20/22 AAAAAAAAAACAAAAAAAAAAG
177310 18/20 AAAAAAAAAAAAAAAAAACT
178526 18/20 AAAAATAAAAAAAAAAAACA
179693 20/22 TTTTTTTTTTTTTTTTTTTTGC
181382 26/28 AAAAAAAAAAGAAAAACAAAAAAAAAAA
186014 18/20 AAAAAAGAAAGAAAAAAAAA
188077 23/25 AAAAAAAAAAAAGACAAAAAAAAAA
189703 19/21 TTTTTTTTTTTTTGTTTTTTC
192944 18/20 TTTTTTTTGGTTTTTTTTTT
193236 18/20 TTTTTATTTTTTTATTTTTT
193588 24/26 AAAAAAAAAAAAAAAAAAACAAAAAC
193785 21/23 TTTTTGTTTTTTTTTTTTATTTT
196009 20/22 AAAAAAAGAAAAAAAGAAAAAA
197528 18/20 CCCCCCCCCCCCTCCCCCCA
197824 20/22 AAAAAGATAAAAAAAAAAAAAA
198014 18/20 AAAAAAAAACAGAAAAAAAA
199451 18/20 AAAAAAAAAAAAAAGAAAAT
202715 18/20 TTTTTAATTTTTTTTTTTTT
205243 24/26 AAAAAAAAAAAAAAAAAAAAAAAATT
209825 23/25 AAAAAAAAGAAGAAAAAAAAAAAAA
222316 19/21 TTTTTTTTTATTTTTTTTTTC
225312 23/25 AAAAAAAAAAAAAAAAGTAAAAAAA
227554 19/21 CCCCCCCCCCCCCCCCCCCTT
228485 19/21 AAAAAAAAAAAAAAAGAAAAC
229537 19/21 AAAAAAAAAAAAAAAAAGAAG
229826 19/21 TTTTTTTTTATTTTTTTTATT
240891 19/21 GGGGGGGGGGGGGGGGGGGAC
241134 20/22 AAAAAAAAAAATAAAAAAAGAA
241457 18/20 TTTTTTTTTTTTTTTTTAAT
241756 22/24 AAAAAAAAAAAAAAAAAAACAACA
246405 21/23 AAAAAAAAAATAAAAAAAAAAAT
246591 22/24 TTTTTTTTTTTTTTTTTTGTTTCT
247105 23/25 AAAAAAAAAAAAAAAACAAAAAAAC
249637 25/27 AAAAAAAAAAAAATTAAAAAAAAAAAA
250399 21/23 TTTTTTGTTTTGTTTTTTTTTTT
250573 18/20 AAAAAAAAAAAAATATAAAA
253893 20/22 AAAAATAAAAAAGAAAAAAAAA
257622 24/26 TTTTTTTTTTTTTTTTTGTTTTTTAT
260346 18/20 TTTTTTTTTTTTTTGTTTTG
278118 21/23 TTTTTTTTTTGTTTTTTTTTTTA
278917 24/26 TTTTTTTTCTTTTTTTTTTTTTTTGT
280997 18/20 TTTTTTTTTTTTTTTTTTGC
286572 22/24 TTTTTTTTTTTTTTTTTTTAATTT
291903 18/20 AAAAACAAAAAAAAAAAATA
293288 22/24 TTTTTTGTTTTTTTTTTTTTTTTG
295205 22/24 AAAAATAAAAAAACAAAAAAAAAA
295952 32/35 AAAAAGAAAAAAAAAAAAAAAAAAAAAAAGGAAAA
297667 18/20 TTTTTTTTTTTTTTACTTTT
309807 21/23 TTTTTATTTTTTTTTTTTTTATT
312938 19/21 AAAAAAAAAAGAAAAAAAAAC
313105 20/22 AAAAAAAAAAAAAAAACAAAAG
----------------------------------------------------------------------------
Total sequence length......................... 313965
Total number of repeats detected.............. 111
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 59 45 2 2
30 to 39 1 1 0 0
40 to 49 0 1 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 60 47 2 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290927|gb|AE003444.1|AE003444 Drosophila melanogaster genomic scaffold 142000013386054 section 28 of 35, complete sequence
Position Repeat-length Repeat
526 18/20 AAAAAAACAAAAAAATAAAA
1886 38/42 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCTT
3209 19/21 AAAAAAAAAATAAAAAAAAAG
15604 26/28 TTTTTTTTTTGTTTATTTTTTTTTTTTT
16677 19/21 AAAAACAAACAAAAAAAAAAA
17622 18/20 TTTTTTTTTTTTTTGTTCTT
22080 18/20 TTTTTGTTTGTTTTTTTTTT
30314 18/20 AAAAAAAAAAACAAATAAAA
31664 25/27 TTTTTTTGTTTTTTGTTTTTTTTTTTT
34774 24/26 AAAAAAAAATTAAAAAAAAAAAAAAA
37422 23/25 TTTTTTTTTGTTTTTTTTGTTTTTT
39181 19/21 TTTTTTGTTTTTTGTTTTTTT
61094 30/33 TTTTTTTTTTTTTTTTTTTTTGGTTTTTTTCTT
64453 19/21 TTTTTGTTTTTTTTTTTCTTT
67271 19/21 AAAAAAAAAAAAAAAAAACAG
68103 18/20 AAAAAAAAAAAAAACAAAAC
81196 21/23 AAAAAAAAAAACAAAAGAAAAAA
82448 24/26 TTTTTTTTTTTTTTTTTTTTTTTGTC
83123 20/22 TTTTTTTCTTTTTTTTTTTTCT
84248 23/25 AAAAAAGACAAAAAAAAAAAAAAAA
86898 18/20 AAAAAAAGAAAAAAAGAAAA
91770 18/20 TTTTTTTTTTTTTGTCTTTT
94145 21/23 AAAAAAAAAAATAAAACAAAAAA
96091 25/27 TTTTTTCTTTGTTTTTTTTTTTTTTTT
103656 21/23 AAAAAAAAAAAAAAAAAAAAATT
106886 20/22 TTTTTTTTTTTTTTGTTTATTT
107335 21/23 TTTTTTTTTTTTTTTAGTTTTTT
108964 24/26 AAAAAAAAAAAAAAACTAAAAAAAAA
116056 19/21 AAAAACAAAAAAAAAAAAACA
118535 18/20 AAAAAGAAAAAAAAAAGAAA
124484 21/23 TTTTTTTTTTTTTTTTTTTCTTA
124874 26/28 TTTTTTTTTTTTTTTTTTTTTGTATTTT
125632 22/24 AAAAAAAAAAAAATAAAAATAAAA
128171 21/23 AAAAAAAAAAAAAAAAAATGAAA
136327 22/24 AAAAAAAAAAAAAAAAACAAGAAA
146472 18/20 TTTTTGTTTTTTTTTTTTCT
152168 24/26 AAAAAAAAAAAAACAAAAAAACAAAA
159473 19/21 TTTTTTTGTTGTTTTTTTTTT
160594 24/26 TTTTTTTTTTTTTTTTTTTTTTTTGG
166230 18/20 AAAAAAAAAAAAAAAAAACC
167061 23/25 TTTTTTTTTTTTTTTTTTTTTTGTA
191474 19/21 GGGGGGGGGGGGGGGGGAGAG
199221 18/20 AAAAAAAAAAAAAAAAGAGA
200096 23/25 TTTTTTTATTTTTTTTTTTTATTTT
203697 20/22 TTTTTTTTTTTTTTGTTTTTGT
215762 19/21 AAAAAAAAAAAAAAAAAGAAT
218153 19/21 AAAAATAAAAAAAAAATAAAA
225778 19/21 TTTTTCTTTTTTTTTTTTCTT
228601 18/20 AAAAAAGAAAAAAGAAAAAA
228829 20/22 AAAAAATAAAAAAAAAAGAAAA
228871 24/26 TTTTTTCATTTTTTTTTTTTTTTTTT
230433 18/20 AAAAAAAAGAAAAAGAAAAA
241050 18/20 CCCCCGCCCCCCCCCCCTCC
246183 24/26 GGGGGAGGGGGGGGGGGGGGTGGGGG
250513 20/22 TTTTTTTTTTTTTTAGTTTTTT
252973 20/22 AAAAAAATAAAAAAAAAAACAA
257567 21/23 TTTTTTTTTTTTTTTTTCATTTT
264003 28/31 TTTTTTTTTTTTTTTGTTTTTTGTTTTTTGT
264328 18/20 AAAAAAAAAAAAACAAAAAC
267887 22/24 AAAAAAAAAAAAAAAAAATAGAAA
277391 22/24 AAAAAAAAAAAAAAAAAAAAATAG
280737 20/22 AAAAAAAAAAAAACAAAAAACA
288607 20/22 AAAAAAAGAAAAAAAATAAAAA
289621 20/22 CCCCCCCCCCCCCCCCCTCCAC
----------------------------------------------------------------------------
Total sequence length......................... 300710
Total number of repeats detected.............. 64
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 32 25 2 2
30 to 39 0 2 0 0
40 to 49 1 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 33 27 2 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290880|gb|AE003443.1|AE003443 Drosophila melanogaster genomic scaffold 142000013386054 section 27 of 35, complete sequence
Position Repeat-length Repeat
26861 21/23 TTTTTTTTTTTTTTTTTTTGTAT
39456 21/23 AAAAAAAAAAAAAAAAAACAAAT
54566 26/28 TTTTTTTTTTTTTTTTTTTTTTTTTTGG
58701 24/26 TTTTTTTTTTGTTTGTTTTTTTTTTT
58955 19/21 TTTTTTTTTTTTTTTTTTGTA
59507 18/20 AAAAAAAAAAACAAAACAAA
73144 18/20 AAAAAAAGAAACAAAAAAAA
73810 22/24 TTTTTTTTTTATTTTATTTTTTTT
74329 19/21 AAAAAAAAAAAACAAAATAAA
76305 25/27 TTTTTTTTTTTTATTTTTTTTTTATTT
77671 24/26 TTTTTTTTTTTTTTTTTTTTTTTTAA
82009 19/21 AAAAAAAAAAAAGAAAAAATA
89492 19/21 TTTTTTTCTTCTTTTTTTTTT
90691 20/22 AAAAAAAAACCAAAAAAAAAAA
90726 22/24 AAAAAAAAAAAAAGAAAAAAACAA
92445 18/20 AAAAAACAAAAAAAAAAACA
94149 19/21 TTTTTTTTTTTTTTTTTGTCT
94692 18/20 AAAAAAAAAAAGAAAAAGAA
94933 20/22 TTTTTTTTTTTTATTTTTTTAT
125976 18/20 TTTTTTTTTTTTTTGTATTT
126482 21/23 AAAAAAAAAAAAAACAAGAAAAA
146244 18/20 TTTTTATTTTTTTTTTTTTA
146934 18/20 TTTTTTTTTTTTTTCGTTTT
152213 18/20 TTTTTTTTTTTTTTTTTCTA
166643 20/22 TTTTTTTTTCGTTTTTTTTTTT
168495 18/20 AAAAAAAAAAAATAAAAAAT
169822 20/22 TTTTTTTTTTGTTATTTTTTTT
174650 20/22 GGGGGGGGAGGGGGAGGGGGGG
178372 18/20 AAAAAAAAAAAAAAAAAGAG
178817 21/23 AAAAAAGAAAATAAAAAAAAAAA
179664 24/26 TTTTTTTTGTTTTTTTTTTTTATTTT
186887 21/23 AAAAAAAAAAAGAAAAAAAAAAG
188195 26/28 TTTTTTTTTTGTATTTTTTTTTTTTTTT
198698 23/25 AAAAAAAAAAAAAAAAAAAAAAATG
201157 18/20 AAAAAAACAAAAATAAAAAA
204097 19/21 AAAAAAAAAAAAGAAAAAATA
210457 18/20 TTTTTTTTTTTACTTTTTTT
214770 20/22 AAAAAAAAATATAAAAAAAAAA
217552 22/24 TTTTTTTTTTTTTTTGTTTTTCTT
219360 19/21 AAAAAACAAAAAAAAAAAAGA
221937 19/21 TTTTTTTTTTCTTTTTTTTTC
228158 18/20 TTTTTTTTAATTTTTTTTTT
233576 18/20 TTTTTTTTTTTTTTTGCTTT
234745 23/25 TTTTTTTTTTGTTTTTTTTTTTTTG
236726 18/20 AAAAACAAAAAAAAAAAATA
239884 22/24 AAAAAAAAAAAAAAAATAAATAAA
240850 19/21 AAAAAAAAAAAAAAAAATAAC
242023 19/21 TTTTTTTTTTTTTTTTGTCTT
242984 19/21 AAAAACAAAAAAAAAAAAAAG
248094 20/22 AAAAAAAAAAAAAACAAAAAAT
248656 18/20 TTTTTTTTTTTTTTTTGTTG
257511 19/21 TTTTTTTTTTTGTTTTTTGTT
259442 21/23 TTTTTTTTTTTTGCTTTTTTTTT
260250 19/21 AAAAACAAAAAAAACAAAAAA
269522 18/20 AAAAAAAAAATAAAAAAAAT
270893 18/20 AAAAAAAAAAACAAAACAAA
277007 21/23 AAAAAAAAAGAAAAAAACAAAAA
278695 19/21 AAAAAAAAAACCAAAAAAAAA
279445 19/21 GGGGGGGGGGGGGGGGAGGTG
280369 25/27 TTTTTATTTATTTTTTTTTTTTTTTTT
297237 18/20 AAAAAAAAAAAAAACAAAGA
----------------------------------------------------------------------------
Total sequence length......................... 302357
Total number of repeats detected.............. 61
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 30 29 2 0
30 to 39 0 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 30 29 2 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290831|gb|AE003442.1|AE003442 Drosophila melanogaster genomic scaffold 142000013386054 section 26 of 35, complete sequence
Position Repeat-length Repeat
463 18/20 TTTTTTTTTTTTTTATTGTT
4130 21/23 TTTTTTGTTTTTCTTTTTTTTTT
23560 20/22 AAAAAAAAAGAAAAAAATAAAA
31379 19/21 AAAAAAAAAAAAAAAGAAGAA
34491 25/27 TTTTTTTTTTTTTTTTTTTTTTTTGTG
36586 25/27 AAAAAAAAAAAAACAAAACAAAAAAAA
43046 23/25 AAAAAAAAAAAAAAAAAAAAAAATT
43529 18/20 AAAAAAAAAAAAAAAAAGCA
69604 19/21 AAAAAAAAAAAAAACAAACAA
70261 18/20 AAAAAGCAAAAAAAAAAAAA
118909 19/21 TTTTTTTGCTTTTTTTTTTTT
147716 22/24 AAAAAAAAAAAAAAAAACAATAAA
159817 22/24 TTTTTTTTTTTTTTTTTTGTTATT
161032 18/20 TTTTTCTTTTTTTTTTTTTG
168299 18/20 CCCCCCCCCCCCCTCTCCCC
171557 19/21 AAAAAAAAAAAAAAAAAACAT
177879 23/25 TTTTTTGTTTTTTTTTTTTTTTATT
191933 22/24 AAAAAAAAAAAAAACAAAAAAATA
197365 18/20 AAAAAAAAAAAAAATAGAAA
205906 19/21 TTTTTTTTTTTATTTTTTTTA
209122 21/23 TTTTTTTTTTTTTTTTTTTTTGC
209403 28/31 AAAAAAAAAAAGAAAGAAAAAAAAAAAAAAC
216134 19/21 AAAAAAAAACAAAAAAAAAAT
221060 19/21 TTTTTTTTTGTTTTGTTTTTT
222692 21/23 AAAAAAAAAAAAATAATAAAAAA
224863 19/21 TTTTTTTTTATTTTTTTTTTC
225456 24/26 TTTTTTTTTTTTTTTTTTTTTTGATT
231659 21/23 AAAAAAAAAAAAAAAACAAAATA
232656 25/27 TTTTTTTTATTATTTTTTTTTTTTTTT
233191 26/28 TTTTTTTTTTTTTTTTTTTTTTTTTGCT
235295 19/21 TTTTTTTTATTTTTTATTTTT
241234 21/23 TTTTTATTATTTTTTTTTTTTTT
243976 23/25 AAAAAAAAAACGAAAAAAAAAAAAA
244683 19/21 TTTTTTTCATTTTTTTTTTTT
257379 20/22 AAAAAAAAAACAATAAAAAAAA
259861 19/21 AAAAAAAAAAAAAAAAAAACT
275309 24/26 TTTTTGGTTTTTTTTTTTTTTTTTTT
276106 21/23 TTTTTTTTTTTTCTTTTTCTTTT
282259 21/23 TTTTTTTTTAATTTTTTTTTTTT
291363 19/21 TTTTTTGTTCTTTTTTTTTTT
----------------------------------------------------------------------------
Total sequence length......................... 306267
Total number of repeats detected.............. 40
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 17 21 0 1
30 to 39 1 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 18 21 0 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290819|gb|AE003441.1|AE003441 Drosophila melanogaster genomic scaffold 142000013386054 section 25 of 35, complete sequence
Position Repeat-length Repeat
648 21/23 AAAAAAAAAAAAAAAACGAAAAA
6761 30/33 TTTTTTTTTTTTGTTTTGTTTTTTTTTTTTTTG
12079 18/20 TTTTTTTTTTTTGTTTTTTC
19853 19/21 AAAAAAAAAAATAAATAAAAA
28368 21/23 AAAAAAAAAAAAAAAGAAAAAAT
30077 18/20 AAAAAAAAAAAAAAACAATA
37614 18/20 TTTTTTTTTTTTTTTTTTGG
47756 25/27 TTTTTTTTTTTTTTTTTTTTTGTTGTT
51815 21/23 TTTTTTTTTTTTTTTCTTTTTCT
58859 18/20 AAAAAAAAATATAAAAAAAA
63760 19/21 TTTTTTTTTTTTTTTTGGTTT
64147 21/23 TTTTTTTTTCTTTTTTTTTTTGT
64829 26/28 AAAAAAAAAAAACCAAAAAAAAAAAAAA
66064 19/21 AAAAAAAAAGAAAAAACAAAA
69919 24/26 AAAAAAAAAAAAAAAACAAAAAAAGA
73799 18/20 AAAAAAACAAAAAAAAACAA
75934 21/23 TTTTTTCTTTTCTTTTTTTTTTT
76428 24/26 TTTTTTTTTTATTTTTTTTTTTTTTG
86121 22/24 AAAAACAAAAAACAAAAAAAAAAA
87091 22/24 TTTTTTTTTTTTTTTTTTTTTTGG
90163 22/24 TTTTTTATTTTCTTTTTTTTTTTT
98375 18/20 AAAAAAAAAAAAATAGAAAA
102453 18/20 TTTTTCTTTTTTTTTTTTAT
103108 19/21 TTTTTATTGTTTTTTTTTTTT
103427 18/20 TTTTTTTTTTTGTTTTTTGT
103669 19/21 AAAAAAAAAAAAAATAAAACA
105071 25/27 TTTTTTTTTTTTTTTTTTGTTTTTTTC
116669 22/24 TTTTTCTTCTTTTTTTTTTTTTTT
118037 22/24 TTTTTTTTTTCTTTTTTTTTTTTG
119599 19/21 AAAAAAAAAGAAAATAAAAAA
128740 19/21 AAAAAAAAAAAAAGAAGAAAA
135699 22/24 AAAAAACAAAAAACAAAAAAAAAA
140927 18/20 TTTTTTTTTTGTTTTGTTTT
152077 18/20 AAAAAAAAAATAAAAAGAAA
152285 23/25 AAAAAAAAAAAAAAAAAAGAAAAGA
153932 22/24 TTTTTTTTTTTTTTTTTTTTAATT
160694 19/21 TTTTTTTGTTTTTTTTTTATT
161933 18/20 AAAAAAAATAAAAAAAAGAA
169905 19/21 TTTTTTTGTTTTTTGTTTTTT
185251 19/21 AAAAAAAAAAAACCAAAAAAA
185527 18/20 TTTTTTTTTTTTTATTCTTT
185828 18/20 AAAAAAAAAAATCAAAAAAA
189050 34/37 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCAG
197202 19/21 TTTTTTTTTTTTTTTTTGTTC
198007 24/26 AAAAAAGAATAAAAAAAAAAAAAAAA
205037 21/23 AAAAAAAAAAAAAAAAAGAAAAG
232307 21/23 GGGGGGGTTGGGGGGGGGGGGGG
234407 20/22 AAAAAAAAAAAAAAACAAAATA
241053 19/21 TTTTTTTTTTTTTTTGGTTTT
241468 18/20 AAAAAAAAACAAAAAAAGAA
247163 18/20 AAAAAAAAAATAAAAAAAAC
255454 22/24 TTTTTTTTTTGTTTTTTGTTTTTT
269516 18/20 GGGGGGAGGGGTGGGGGGGG
270056 35/38 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATTTG
----------------------------------------------------------------------------
Total sequence length......................... 285272
Total number of repeats detected.............. 54
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 25 24 2 0
30 to 39 1 2 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 26 26 2 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290801|gb|AE003440.1|AE003440 Drosophila melanogaster genomic scaffold 142000013386054 section 24 of 35, complete sequence
Position Repeat-length Repeat
1494 25/27 AAAAAAAAAAAAAAAAAAACCAAAAAA
4045 20/22 TTTTTTTTTTTTTTTTTTTTCG
6853 19/21 AAAAAAAAAAAAAAAAAAACG
12667 21/23 AAAAAAAAAAAAAATAAAAGAAA
15589 22/24 AAAAAACCAAAAAAAAAAAAAAAA
18618 20/22 AAAAAAAAAAAAAAAAAAAATG
20618 26/28 AAAAAAAAAAAAAACAAAAAAAAAAAGA
21336 19/21 TTTTTTTTTTTTTTTTTTTGC
26567 26/28 TTTTTTTTTTTTTTTTTTTTTTGTTATT
27008 27/30 TTTTTTTTTTTTTTTTTTTTTTTGTTCTTC
27701 18/20 AAAAAAAAAAAAAAAACAGA
29929 21/23 TTTTTTTTTTTTTTACTTTTTTT
37988 34/37 TTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTGC
43260 25/27 AAAAAAAAAAAAAAAAAAAAAAAAATT
53163 18/20 TTTTTTTTTTTTGTTGTTTT
57082 21/23 TTTTTATTTATTTTTTTTTTTTT
57515 22/24 AAAAAAAAAAAAAAATAAATAAAA
59130 18/20 TTTTTTTTTTTTTTTTGTTC
59421 18/20 TTTTTTTTCTTTTTCTTTTT
63122 20/22 TTTTTTGTTTTTTTTTTTTTCT
63522 18/20 AAAAAGAAAAAAAAAAAACA
65009 24/26 AAAAAAAAAAAAAAAATAAAAAAAAC
78014 18/20 AAAAAAAAAAAAAAAAATAC
78468 18/20 TTTTTTTTTTTTTTGTATTT
86299 18/20 AAAAAAAAAAAAAAAACGAA
91511 18/20 CCCCCCCCCCCCCCCCACTC
92790 18/20 AAAAAAAAAAAAATAAATAA
97207 26/28 AAAAAAAAAAAAAAAAAAAAAAAAGGAA
103109 18/20 TTTTTTTTTTTTTTTTTTGC
104327 22/24 AAAAAAAAAAAAAAAAAAGAAGAA
106221 20/22 TTTTTTTTTTTTTTTTATTTGT
108598 19/21 AAAAAATAAAAAAAATAAAAA
109260 18/20 AAAAAAAAATAAAAAATAAA
114403 25/27 TTTTTTTTTTTTTTTTTTTTTTTTTGG
120984 22/24 TTTTTTTTTTTTTTTTTGTTTCTT
123605 20/22 AAAAAAAAAAAAAAACAAAATA
125104 24/26 TTTTTTATTTTTTTTTTTTTTTTTTG
126402 21/23 TTTTTTTTTTTTTTTTTTTGATT
133652 18/20 TTTTTTTTTGTTTTGTTTTT
139386 18/20 TTTTTCTTTTTTTTTTTCTT
146071 24/26 TTTTTTGTTTTTGTTTTTTTTTTTTT
146503 26/28 TTTTTTTTTTTTTTTTTTTTTTTTTTGG
147992 25/27 TTTTTTGTTTTTTTTTTTTTTGTTTTT
157037 18/20 AAAAAAAAAAAAAAAAAATT
157427 27/30 AAAAAAAAAAAAAAAACAAAAAAAAAACAG
161214 21/23 AAAAAAAAAAAAAAAAAAAAACT
177342 21/23 AAAAAAAAAAAAAAAAAGAAACA
177800 21/23 AAAAAAAAAAAAAACAAAATAAA
195598 18/20 TTTTTTGTTGTTTTTTTTTT
196315 20/22 AAAAAACAAAAAAAAAAAAAAT
199793 22/24 AAAAAAAAAAAAAATAAAATAAAA
204278 20/22 AAAAAAAAAAAATACAAAAAAA
209164 21/23 TTTTTTTTTTTTTTTTGTATTTT
211024 18/20 AAAAAAAAAAAACAATAAAA
211416 23/25 AAAAAACAAAAAAAAAAAAAAATAA
217152 20/22 TTTTTTTTTTTTTTGTTTTGTT
223298 24/26 TTTTTTTTTTTTATTTTTTATTTTTT
224238 18/20 GGGGGGGGGGGAGGGGGTGG
232328 24/26 TTTTTTTGTATTTTTTTTTTTTTTTT
239312 19/21 TTTTTTTTTTTTTGTTTTATT
247055 19/21 TTTTTTTTTTTTTTTGTTTTG
251066 18/20 TTTTTTTGGTTTTTTTTTTT
259317 18/20 AAAAAAATAAATAAAAAAAA
259431 19/21 AAAAAAAAAAAAAACAAAACA
261804 18/20 TTTTTTTTTTTTTTTGCTTT
267236 26/28 AAAAAAAAAAAAAAAAAAAAAAAAACAT
267889 18/20 TTTTTTAATTTTTTTTTTTT
268947 19/21 TTTTTTGTTTTTTTTTTTTAT
284922 21/23 TTTTTTCATTTTTTTTTTTTTTT
287874 18/20 AAAAAAAAAAAAACACAAAA
302584 18/20 TTTTTTTTTTTTTTTTTGCT
309213 25/27 TTTTTTTTTTTTTTTTTTTGTCTTTTT
313589 18/20 AAAAAATTAAAAAAAAAAAA
314792 21/23 AAAAAAAAAAAAAAAAAAAACAG
322294 19/21 AAAAAAAAAAAAAAAAAAATG
327751 23/25 TTTTTTTGTTTTTTTTTTGTTTTTT
333521 21/23 AAAAAAAAAAAAAAAAAAACACA
336845 21/23 AAAAAAAAAAAAAAAAAACACAA
----------------------------------------------------------------------------
Total sequence length......................... 342068
Total number of repeats detected.............. 78
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 37 36 1 1
30 to 39 1 2 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 38 38 1 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290764|gb|AE003439.1|AE003439 Drosophila melanogaster genomic scaffold 142000013386054 section 23 of 35, complete sequence
Position Repeat-length Repeat
26 18/20 TTTTTGTTTTTTCTTTTTTT
4474 18/20 TTTTTTTTTAATTTTTTTTT
14645 23/25 TTTTTTTTTTTTATTTTTTTGTTTT
16781 26/28 TTTTTTTTTTTTTTAATTTTTTTTTTTT
21148 18/20 AAAAAAAAAAAAAATAAGAA
41571 18/20 TTTTTTTTTTTTTGTTTTTG
43468 18/20 CCCCCCCCCCCCCCCCCTTC
46061 19/21 CCCCCCACCCCCCCCTCCCCC
46914 18/20 TTTTTTTTTTTTTTTTTTAC
55654 18/20 AAAAAAAAAAAACGAAAAAA
62042 29/32 TTTTTTTCTTTTGTTTTTTTTTTTTTTTTTTG
62768 18/20 TTTTTTTTTTTTTTTACTTT
63543 23/25 TTTTTTTTTTTTTTTTTTTGGTTTT
63752 32/35 AAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAAAAC
65927 22/24 AAAAAAAAAAAAAAAATAAAATAA
66316 21/23 AAAAAAAAAAAAATAAAAAAAAC
70195 18/20 TTTTTTTTTTGCTTTTTTTT
70394 25/27 AAAAAAAAAAATAAAAAATAAAAAAAA
80696 22/24 AAAAAAAAAAAACAAAACAAAAAA
81725 24/26 AAAAAAAAAAAAACAAAAAAAAAACA
94555 21/23 GGGGGGGGGGGGGGGGGGGGGAA
99492 21/23 AAAAAAAAAAAAAAAAAAAAACT
110297 19/21 AAAAAAAAAAAAAAAAAACAT
131767 21/23 TTTTTTTTTTTTTTGTTTTGTTT
187175 19/21 AAAAAAAAAAAAAATAAATAA
187329 24/26 AAAAAAAAAAAAAAAAAAAAAATATA
222643 20/22 TTTTTTTTTTCTTTTTTTTTTA
226285 18/20 TTTTTTTTTTTTTTTAATTT
229525 19/21 TTTTTTTTTTGTTTTTTTTAT
229580 18/20 AAAAAAAAAAAGAAAAACAA
231978 19/21 TTTTTTTTTTTTTTTTTCTGT
232515 24/26 TTTTTTGTTTGTTTTTTTTTTTTTTT
238041 20/22 TTTTTTTTTTTTTTTTTGGTTT
239633 18/20 AAAAAAGAAAAACAAAAAAA
241009 18/20 TTTTTGTGTTTTTTTTTTTT
245088 19/21 AAAAAAAATAAAAAAAAATAA
245985 20/22 AAAAAAAAGAAAAAAAAAAAGA
246725 19/21 TTTTTTTTTTTTTTTTTTTGG
253939 19/21 AAAAAAAAAAGAAAAAACAAA
268340 22/24 TTTTTTTCTTTTTTTTTTTTGTTT
272416 21/23 TTTTTTTTTTTTTTTTTTTTGTA
280120 21/23 TTTTTTTTCTTTTTTTTTTGTTT
306798 18/20 AAAAAAAAAAATAAAAAACA
313263 24/26 TTTTTTTTTTTTTTTTTTTTGATTTT
324686 19/21 AAAAAAAAAAAAATAAATAAA
325755 18/20 TTTTTTTTTTTTTTGATTTT
327504 19/21 AAAAAAAAACAAAAAAAATAA
----------------------------------------------------------------------------
Total sequence length......................... 328089
Total number of repeats detected.............. 47
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 19 23 1 2
30 to 39 1 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 20 24 1 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290724|gb|AE003438.1|AE003438 Drosophila melanogaster genomic scaffold 142000013386054 section 22 of 35, complete sequence
Position Repeat-length Repeat
2040 20/22 AAAAAAAAAAAAAAAAAAACAC
5495 19/21 TTTTTTTTTTTTTTTTTTGGT
6604 19/21 AAAAAAAAAAAAAAAACAGAA
9777 23/25 AAAAAAAATAAAAAAAAAAAAAAAC
15161 18/20 AAAAAAAAAAAAAATAATAA
31969 22/24 AAAAAAAAAAAAAAAAAAAATCAA
45589 23/25 AAAAAAAAAAAATAAATAAAAAAAA
46346 18/20 AAAAAAAAAAAACATAAAAA
56566 22/24 AAAAAAAAAAAGAAGAAAAAAAAA
68840 22/24 AAAAAAAAAAAGAAAAAAAAAACA
69736 19/21 TTTTTTTTTTTTTTTTTTTAG
80074 19/21 TTTTTTTTTTGTTTTTTTTTG
82323 21/23 TTTTTCTCTTTTTTTTTTTTTTT
83988 19/21 AAAAAAAAAAAAAAAATAAAT
85371 19/21 TTTTTTTGTGTTTTTTTTTTT
88896 20/22 TTTTTATTTTTTTTTTGTTTTT
90085 23/25 AAAAAAAAAAAAAAAAAAAAAAATG
91629 21/23 TTTTTTTTTTTTTGTATTTTTTT
93209 18/20 TTTTTGGTTTTTTTTTTTTT
96840 23/25 AAAAAAAAAACAAAAAAAAAAACAA
100273 25/27 AAAAAAAAAAAAAAAAAAAAAACGAAA
100704 18/20 TTTTTTGTTTTTTTTTTTGT
103853 22/24 TTTTTTTTTTGTTTTTTTTTTTTC
105581 18/20 AAAAAATACAAAAAAAAAAA
112034 19/21 AAAAAAAAAAAACAAAAATAA
112182 20/22 TTTTTTTTTTTTTTGTTTCTTT
112986 30/33 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAC
119901 19/21 AAAAAAAAATATAAAAAAAAA
123760 24/26 TTTTTTTTTTTTTTTTTTTTTTTGTA
125926 21/23 AAAAAAAAAAAAAAAAAACTAAA
131904 22/24 TTTTTCTTTTTCTTTTTTTTTTTT
149249 19/21 TTTTTTTTTTGCTTTTTTTTT
156738 19/21 TTTTTTTTTTTTTTTTATTTA
175422 21/23 AAAAAAAAAAAAAAATACAAAAA
178296 19/21 AAAAAAAAAAAAAAAAAAATG
178663 18/20 TTTTTTTTTTTTTTGTTGTT
179000 19/21 TTTTTTTTTTCGTTTTTTTTT
180581 20/22 AAAAAAAAACAAAAAAAAAATA
186071 20/22 TTTTTTTTTTTGTTTTGTTTTT
187797 24/26 AAAAAAAAAAAAGAAAAAAAAGAAAA
200335 25/27 AAAAAAAAAAAAATAAAAAAAAAAATA
208927 18/20 GGGGGGGGGGGGGGGGGATG
211651 41/45 TTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATGG
212844 31/34 AAAAAAAAAAAAAAAAATAAAAAAAATAAAAAAT
230201 20/22 TTTTTTTTTTTTTTTATTTCTT
241276 23/25 TTTTTTGTTTTTTTTTTTTTTTTTG
266705 21/23 TTTTTTTTTTTTTTTTTTTTTAA
298257 20/22 TTTTTGTTTTTTTTTCTTTTTT
----------------------------------------------------------------------------
Total sequence length......................... 299372
Total number of repeats detected.............. 48
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 22 22 1 0
30 to 39 2 0 0 0
40 to 49 0 1 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 24 23 1 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290686|gb|AE003437.1|AE003437 Drosophila melanogaster genomic scaffold 142000013386054 section 21 of 35, complete sequence
Position Repeat-length Repeat
6085 19/21 TTTTTTTTTTTTTTCTTTTTG
28922 23/25 TTTTTATTTTATTTTTTTTTTTTTT
30599 26/28 AAAAAAAAAAAAAAGAAAAGAAAAAAAA
44896 20/22 AAAAAAAAAAAAACAAAATAAA
69106 18/20 TTTTTATTGTTTTTTTTTTT
79408 18/20 AAAAAAATAAAAAAAAAAAC
110044 23/25 CCCCCCCCCCCCCCCCCGCCCCACC
138850 19/21 AAAAAAAAAAAAAAAAATGAA
143655 20/22 TTTTTATTTTTTTTTTTTTTTG
146205 18/20 TTTTTTTTTTTTTTTTTGCT
146331 19/21 AAAAAAAAAAAGAAAAAAAAT
146785 21/23 AAAAAAAATTAAAAAAAAAAAAA
147396 19/21 AAAAAAAAAAAAACAAAAAGA
155011 22/24 TTTTTTTTTTTGGTTTTTTTTTTT
162875 29/32 AAAAAAAAAAAAAAAAAAAAAAAAAAAGATGA
179561 23/25 TTTTTTTTTTTTTTTGTTTTTTTGT
193757 20/22 TTTTTTTTTTTTAATTTTTTTT
195548 23/25 TTTTTTTTTTTTTTTTTTATTATTT
202078 23/25 TTTTTTTTTCTTTTTTTTTTTTTTG
202999 19/21 TTTTTTTTTTTTTTTGTTTTG
203649 22/24 AAAAAAAAAAAAAAAAAGAAAACA
203893 19/21 AAAAAAAAAAAAAAAAAAGGA
228801 18/20 TTTTTTTTTTTTTTATTTGT
230476 23/25 TTTTTGTTTTTTTTTTTTTTTTTTG
247996 24/26 TTTTTTTTTTTTTTTTTTTTCTTTTC
248652 25/27 AAAAAAAAAAAAAAAAAAAAAGGAAAA
255800 24/26 AAAAAAAAAAAAAAAAAACAAACAAA
258212 41/45 AAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAATAAAAAAAGAAT
260511 26/28 TTTTTTTTGTTTTTTTTTTTTTGTTTTT
262574 21/23 TTTTTTATTTTTATTTTTTTTTT
267679 20/22 TTTTTTTTTTCTTTTTTTTTTC
271082 18/20 TTTTTTGTTTTTTTTTTTTG
273847 20/22 AAAAAAAAAGAAAAAAGAAAAA
275785 19/21 AAAAAAAAAAAATAAATAAAA
275970 19/21 AAAAAATAAAAAACAAAAAAA
277543 22/24 AAAAAAAAAAAAAATAAAGAAAAA
277850 24/26 AAAAAAAAAAAAAAAAAAAACCAAAA
280821 31/34 AAAAAAAAAAAAAAAAAAAAAGGAAAAAAAAGAA
282864 18/20 AAAAAAAAAAAAAAGAAAAT
285363 19/21 AAAAAAAAAAAAAGAAAAAAG
296323 22/24 AAAAAAAAAAAAAACAAAAAAAAT
----------------------------------------------------------------------------
Total sequence length......................... 305046
Total number of repeats detected.............. 41
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 19 18 0 1
30 to 39 2 0 0 0
40 to 49 1 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 22 18 0 1
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290653|gb|AE003436.1|AE003436 Drosophila melanogaster genomic scaffold 142000013386054 section 20 of 35, complete sequence
Position Repeat-length Repeat
5625 33/36 AAAAAAAAAAAAAAAGAAAAAAAAAAACAAAAAAAC
17824 29/32 TTTTTTTTTTTTGGTTTTTTTTTTTTTTTTTA
20930 21/23 TTTTTTTTTTTTTTTTTTTTTGA
25624 19/21 AAAAAAAAAAAAAAAAACAAT
29196 18/20 TTTTTTTTTTTTATATTTTT
47851 25/27 TTTTTTTCTTCTTTTTTTTTTTTTTTT
50403 18/20 AAAAAAAAACAAAAAAACAA
51175 18/20 TTTTTTTTTTTTATATTTTT
55372 20/22 TTTTTTTTTTTTTTTTAATTTT
77880 18/20 AAAAACAAAAAAAAATAAAA
83964 24/26 AAAAAAAAAAAAAAAAAAAACAGAAA
100699 28/31 TTTTTTTTTTTTTTTTTTTTTTTTTTGTAAT
130462 18/20 AAAAAAAAAAAGAAATAAAA
171114 18/20 AAAAAATAAGAAAAAAAAAA
187309 19/21 TTTTTTTTTTTTGTTTTGTTT
189461 23/25 TTTTTTTTTTCTTTTTTTTTTTTTG
192542 19/21 AAAAAAAAAAAACATAAAAAA
208650 23/25 TTTTTTTTTTTTTTTTGGTTTTTTT
224121 19/21 AAAAAACCAAAAAAAAAAAAA
225327 20/22 AAAAAAAAAAAAAAATGAAAAA
229494 21/23 TTTTTTTTTTTTTTTTTTTTTGA
240062 26/28 TTTTTTTTTTTTTTGTTTTTTTTTTTTC
257550 19/21 TTTTTTCTTTTTTTTTTTTTG
272869 19/21 AAAAAAAAAAATAAAAAATAA
281161 18/20 AAAAAAAAAAAAAGAAAACA
282934 21/23 TTTTTTCTTATTTTTTTTTTTTT
285336 26/28 TTTTTTTTTTTTTTTTTTTCTTATTTTT
286632 20/22 AAAAAAAAAAGAAAAAAGAAAA
292302 25/27 TTTTTTTTTTTTTTTTTTTTTTTTTGG
305786 20/22 AAAAAAAAAAAAAAAAAAATAT
----------------------------------------------------------------------------
Total sequence length......................... 307017
Total number of repeats detected.............. 30
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 13 14 0 0
30 to 39 1 2 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 14 16 0 0
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290600|gb|AE003435.1|AE003435 Drosophila melanogaster genomic scaffold 142000013386054 section 19 of 35, complete sequence
Position Repeat-length Repeat
23041 21/23 GGGGGGGGGGGGGGAGGGGGGGT
30091 20/22 AAAAAAAAAAAAAAAAGAACAA
49865 21/23 TTTTTTTTGTTTTTTTTTTTTTG
50457 18/20 GGGGGGAGGGGGGGAGGGGG
52221 19/21 TTTTTTTTTTTTTTGTTTTGT
73706 20/22 TTTTTTGTTTTTTTTTTTTTTG
75367 19/21 AAAAAAAAAAACAACAAAAAA
81527 18/20 AAAAACAAAAAAAAAAAAAT
86134 20/22 AAAAAAAAAAACAAAAAAAAAG
97448 21/23 TTTTTTTTTTTTTTTTTTAATTT
104943 27/30 AAAAAAAAAAAAAAAAAAAAAAAAATATAT
119535 21/23 AAAAAAAAAAAAAAAAAGAATAA
129309 25/27 AAAAAAAAAAAAAACAAAAAAGAAAAA
132201 18/20 AAAAAAAAAAAAAAACAACA
141121 20/22 AAAAAAAAAACAAAAAAAATAA
141212 18/20 TTTTTTGTTTGTTTTTTTTT
142573 19/21 TTTTTTGTTTTTTTTTTTTTA
143456 19/21 AAAAAAAAATAAAAAAAAACA
176524 18/20 AAAAAAAAAAAAAAAGAGAA
193232 18/20 AAAAAAAAAAAAAAGAAACA
199357 18/20 CCCCCCCCCCCCCCCTTCCC
201257 23/25 TTTTTTTTTTTTTTTTTTTTTTGCT
208084 18/20 TTTTTTTTTTTTTTATTTTC
208690 23/25 TTTTTTTTTTTTTTTTTTTTTTTGC
208945 18/20 AAAAAAAAAAAACAAAAACA
213857 22/24 AAAAAAAAGAAAATAAAAAAAAAA
234565 19/21 AAAAAAAAAAAAAAACAGAAA
234632 21/23 CCCCCCCTCCCCCCCCCCCACCC
241181 22/24 AAAAAAAAAAAAAAAAACAAGAAA
247285 21/23 AAAAAAAAATAAAAAAAAAAAAC
271312 24/26 AAAAAAAAAAAAAAACAAAAAACAAA
272974 18/20 AAAAAAAAAAATAAAACAAA
275271 20/22 TTTTTTTTTTTTTTTATTTTGT
296104 20/22 TTTTTTCCTTTTTTTTTTTTTT
299663 19/21 AAAAATAATAAAAAAAAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 300557
Total number of repeats detected.............. 35
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 19 11 2 2
30 to 39 1 0 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 20 11 2 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290572|gb|AE003434.1|AE003434 Drosophila melanogaster genomic scaffold 142000013386054 section 18 of 35, complete sequence
Position Repeat-length Repeat
11179 29/32 AAAAAAATCAAAAAAAAAAAAAAAAAAAAAAT
15491 34/37 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACAT
21129 19/21 CCCCCCCCCCCCCCCCTCCAC
24675 24/26 TTTTTTTGTTTTTTTTTTTTCTTTTT
24806 22/24 TTTTTTTTTATTATTTTTTTTTTT
26472 19/21 TTTTTTTTTTCTTTTTTTTCT
31621 25/27 AAAAAAAAAAAAAAAAAAAAAAACTAA
32776 23/25 AAAAAAAAAAAAAAAACAAAAAAAT
33715 23/25 CCCCCCCCCCCCCCCCCGCCCCTCC
40719 18/20 AAAAAAATAAAAAAATAAAA
44067 23/25 TTTTTTGTTTTTTTTTTTTTTTTGT
45257 18/20 AAAAAATAAAAAATAAAAAA
51703 26/28 AAAAAAAAAGAAAACAAAAAAAAAAAAA
60942 19/21 AAAAAAAAAAAAAAAATAAAG
65177 25/27 AAAAAAAAAAAACAAAAAAAAAAAAAT
69911 21/23 AAAAAAAAAAAAAAAACAATAAA
70124 20/22 TTTTTTTTTTTTTTTTTTTTAC
70694 26/28 AAAAAAAAAAAAAAAAACCAAAAAAAAA
71822 19/21 AAAAAAAAAAGAAAAAGAAAA
72059 20/22 AAAAAAAAAAAAAATAAATAAA
72367 19/21 TTTTTTTTTTTTTTTTTTGAT
73142 19/21 AAAAAAAAAAACAAAAAAAGA
73550 19/21 AAAAAAAAAAAAAAACGAAAA
74345 18/20 AAAAAAAAAAAAAATAATAA
79567 24/26 AAAAAAAAAAAAAACAAAAAAAAAAC
80216 24/26 AAAAAAAAAAACAAAACAAAAAAAAA
85430 18/20 TTTTTTTTTTTGTTTTTTAT
90248 21/23 TTTTTTTTTCTTTTTTTTTTGTT
110575 18/20 AAAAAAAAAAAGTAAAAAAA
113028 21/23 TTTTTTATTTTTTGTTTTTTTTT
113665 18/20 TTTTTATTTTTTTTTTTTTA
115875 18/20 GGGGGGGGGGGGCGGGGCGG
116848 19/21 TTTTTTTTTTGTATTTTTTTT
119190 24/26 TTTTTTTTATTTTTTTATTTTTTTTT
123441 28/31 TTTTTTCGTTTTTTTTTTTTTTTTTTTTTGT
123961 26/28 AAAAAAAAAGAAAAAAAAAAAAAAAACA
130406 20/22 TTTTTTTCTGTTTTTTTTTTTT
130529 22/24 AAAAAAAAAAAAAAAAAAAAACAG
133090 25/27 TTTTTTTTTTTCGTTTTTTTTTTTTTT
138228 25/27 AAAAAAAAAAAGAAAAAAAAAAAAACA
141417 26/28 AAAAAAAAAAAAAAAAAAAAAACGAAAA
144568 18/20 AAAAAAAAAAAAAAAATAGA
144988 19/21 TTTTTTTTTTTTTTTTTGTAT
146096 22/24 AAAAAAAAAAGAAAAAAAAAATAA
151077 23/25 AAAAAAAAAAAAAAAAAAACAAAGA
157357 18/20 AAAAAAAAAAAAAAAACAAT
169980 20/22 AAAAACAAAAAAAAAAAAAATA
170479 18/20 TTTTTTTTTTTTTTTTTGGT
174733 26/28 AAAAAAAAAAAAAAAAAGAAAAAAAAAT
182709 22/24 TTTTTTTTTTGTTTTTTTTTTTTA
182883 18/20 AAAAAAAAAAAACAAAATAA
187628 20/22 TTTTTTTTTTTTTTTTGTTTTG
196083 21/23 AAAAAAAAAAAAGAAAAACAAAA
213140 19/21 GGGGGGGGGGGGGGGGGGAGT
245932 19/21 AAAAAAGGAAAAAAAAAAAAA
246124 21/23 TTTTTGTTTTTTTTTTTTTCTTT
248532 25/27 TTTTTTTTTCGTTTTTTTTTTTTTTTT
260173 23/25 TTTTTTTTTTTTGTATTTTTTTTTT
260390 20/22 TTTTTTTTTGTTTTTTTTTTGT
261777 20/22 TTTTTTTTTTTTTTTTTTTTGA
262336 20/22 TTTTTTCTTCTTTTTTTTTTTT
262990 19/21 GGGGGGGGGGGGGGAGGGAGG
272695 19/21 TTTTTTTTTTTTGTTTTTATT
273239 21/23 TTTTTCTTCTTTTTTTTTTTTTT
277147 21/23 AAAAAAAAAATAATAAAAAAAAA
277395 18/20 AAAAAAATAAAAAAAAAACA
278495 20/22 AAAAAAAAAAATGAAAAAAAAA
283151 18/20 AAAAAAGCAAAAAAAAAAAA
287993 25/27 AAAAAACAAAAAAAAAACAAAAAAAAA
288346 20/22 TTTTTTTTTTTTTTTTTTGTAT
291602 19/21 AAAAAAAAAAAAAAAATGAAA
291654 19/21 AAAAAAAAAAAAAAAAAAACT
292064 19/21 AAAAAACAAAAAAAAAAAACA
301525 18/20 TTTTTTTTTTTTTTTGTTAT
----------------------------------------------------------------------------
Total sequence length......................... 302937
Total number of repeats detected.............. 74
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 38 28 3 2
30 to 39 1 2 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 39 30 3 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290549|gb|AE003433.1|AE003433 Drosophila melanogaster genomic scaffold 142000013386054 section 17 of 35, complete sequence
Position Repeat-length Repeat
5762 21/23 TTTTTTTTTTTTTGTTCTTTTTT
6908 19/21 TTTTTTTTTTGTTTTTATTTT
8867 22/24 TTTTTTTTTTTTTTATTTTTTATT
11227 20/22 AAAAAAAAAAAAAGAAAATAAA
13844 18/20 AAAAAAAAAAAAAAACCAAA
16986 21/23 TTTTTTTTTTTTTTTTTTTTTAG
18303 20/22 AAAAAAAAAAAAAACAGAAAAA
18434 21/23 AAAAAAAAAACCAAAAAAAAAAA
18689 21/23 TTTTTTTTTTTTTTTTGTTTTTG
21606 24/26 AAAAAAAAAAACAAAAAAAAAAACAA
28481 19/21 AAAAAAAAAAAAAAATAAACA
31497 20/22 AAAAAAAAAAAAAAAAAAGGAA
32579 22/24 AAAAAAAAAAAAGAAAAAAAAAAC
32836 18/20 AAAAAAAAAAAAAAATGAAA
32973 18/20 TTTTTTTTTTTTTTGTTTCT
33734 30/33 TTTTTATTGTTTTTTTTTTTTTTTTTTTTTTTG
36317 19/21 AAAAAAACAAAAAAAAAAAAT
36534 24/26 AAAAAAAAAAAAAAGAAAAAAAAAAG
37003 20/22 TTTTTTTTTTTTTTTTAGTTTT
38331 18/20 AAAAAAAAAAAAATCAAAAA
46091 20/22 AAAAAAAAGAAAAAAAAAAACA
48352 19/21 TTTTTTTTTTTTTTTTTGTTG
50757 20/22 TTTTTATATTTTTTTTTTTTTT
63990 18/20 AAAAAAAAAAAAACAAAAAT
64719 18/20 TTTTTTTTTTTTTTTTTTAA
65056 37/41 AAAAAAAAAAAAAAAAAAAAAAAAAAACCGAAAAAAAAACA
66227 21/23 AAAAAAAAAAAAAAAAAACCAAA
67049 22/24 AAAAAAAAAAAGGAAAAAAAAAAA
67666 20/22 TTTTTTTTTTTTTTTTTTGTGT
68576 22/24 AAAAAAAAAAAAAGAAAAAAAAAC
80546 19/21 AAAAAAAAAACAAAAAAAACA
80832 22/24 TTTTTTTTTTGTTTTTTGTTTTTT
82152 19/21 AAAAAAAAAAAGAAAAAATAA
82781 22/24 TTTTTTTTTTTTTTTTTTTTTTGG
87210 22/24 TTTTTTTTTTTATTTTTTTTTTAT
87369 21/23 AAAAAAAAAAAAAAAAAAAAATC
93000 33/36 AAAAAAAAAAAAAAAAAAATAAATAAAAAAAAAATA
102158 23/25 TTTTTTTTTTTTTTTTTTTTTTGGT
103445 25/27 AAAAAAAAAAAAAAAAAAAAAAAATTA
104556 20/22 TTTTTTTTTTTTTTTTTTTTGC
106804 19/21 TTTTTTTTTTTTTTTATTTCT
109596 18/20 AAAAAAAAAAGATAAAAAAA
110053 20/22 TTTTTTTTTTTTTTTTTGTTTG
110179 18/20 AAAAAAAAAAAAAAGAAAAG
111279 18/20 TTTTTTTTTTTTTTTTTTAA
111569 19/21 TTTTTTTTTTTTTGTTTTGTT
117974 20/22 TTTTTTTTAATTTTTTTTTTTT
118822 25/27 AAAAAAAAAAAGAAAAAAACAAAAAAA
118850 23/25 AAAAAAAAAGAAAAAAAGAAAAAAA
118876 26/28 AAAAAAAAGAAAAAAAAGAAAAAAAAAA
123900 18/20 TTTTTTTTTCTTTTTTTTTA
124759 21/23 TTTTTTTTTTTTTTCTTTTTTGT
133655 19/21 AAAAAAAAAAAATAAAAAAGA
134773 24/26 AAAAAAAAAAAAAAAAAACAAGAAAA
135073 22/24 TTTTTTCTTTTTTTTTTTTTTTTA
137370 26/28 AAAAAAAAAAAAAAAAAAAAAAAGAAAT
137784 18/20 CCCCCCCCCCCCCCCCTACC
139138 24/26 TTTTTTGTTTTTTTTTTTTTTTTTTG
141826 19/21 AAAAAAAAAAAAAAAACAACA
143858 22/24 TTTTTTTATTTTTTTTTTTTTTTG
146069 19/21 AAAAAGAAAAAAAAGAAAAAA
148493 18/20 AAAAAAAAAATAAAAAAAAG
149752 20/22 AAAAAAAAAAAAAATAAATAAA
149845 19/21 AAAAAAACCAAAAAAAAAAAA
151299 25/27 AAAAAAAAAGAAAAAAAAAAACAAAAA
154629 18/20 AAAAAATGAAAAAAAAAAAA
159019 19/21 GGGGGGGGGGGGGGGGCGAGG
161132 23/25 TTTTTTTTTTTTTTTTGTTTTGTTT
163099 18/20 TTTTTGGTTTTTTTTTTTTT
164270 22/24 AAAAAAAAAATAAAAAAATAAAAA
168886 26/28 TTTTTTTTTTTTTTTTTTTTTTTTGTGT
172107 19/21 TTTTTTTTTTTTTTATATTTT
175566 18/20 TTTTTTCTTTTTTTTTTTTG
175702 22/24 AAAAAAAAAAAAAAGAGAAAAAAA
175952 18/20 AAAAATAAAAAAAAAAAAAC
177871 19/21 AAAAAAAAAAAAGAAAAAATA
178173 25/27 TTTTTTTTTTTTGTTTTTTTTTTTTTG
179093 22/24 AAAAAAAAAAAAAAAATAAAATAA
182437 29/32 TTTTTTTTTTTTATTTTTTTTTTTTTTATTTA
186244 19/21 TTTTTGTTGTTTTTTTTTTTT
187812 25/27 TTTTTTTTTTTTTTTTTTTTTATTTTA
198655 31/34 TTTTTTTTTTTTTTTTTCTTTTTTTTGTTTTTTC
202914 21/23 AAAAAAAAAAAAAAGAAAAATAA
204337 21/23 TTTTTTTTTTTTTTTTTTTCTTC
206224 18/20 AAAAAAAACCAAAAAAAAAA
215660 22/24 AAAAAAAAAAAAACAAAAAAAAAT
218832 19/21 AAAAAAAAAAATGAAAAAAAA
230046 22/24 AAAAAAAAAAAATAAATAAAAAAA
230967 18/20 CCCCCCCCCCCCCCCTCCCT
234378 18/20 AAAAAAACAAAAAAAAAACA
235394 18/20 AAAAAAAAAAAAAATAAGAA
235480 18/20 AAAAAAAAAAAATAATAAAA
263109 19/21 TTTTTCTTTTATTTTTTTTTT
263131 18/20 TTTTTTTTTTTTTCGTTTTT
266235 19/21 TTTTTTTTTTTTTTTTTTGCT
266929 25/27 TTTTTTTCTTTTTTTTTTTTTTTTTTG
267531 18/20 TTTTTTTTTTGTTTTTTTTC
267816 18/20 AAAAAAAAGTAAAAAAAAAA
268829 20/22 TTTTTTTTTTTTTTTTTTGTTG
272017 18/20 TTTTTTTTTTTTTTTTTATC
276813 20/22 TTTTTTTTTTCTTATTTTTTTT
277145 21/23 TTTTTTTTTATTTTTTTTTTATT
278362 25/27 AAAAAAAAAAAAAAAAGAAAAAAAAAG
285270 26/28 AAAAAAAAAAAAAAAAAAGAAAACAAAA
287347 21/23 AAAAAGGAAAAAAAAAAAAAAAA
295128 28/31 AAAAAAAAAAAAAGAAAAAAAAAAACAAACA
296123 21/23 AAAAAAAAACAAAAAAAAAAAGA
----------------------------------------------------------------------------
Total sequence length......................... 303258
Total number of repeats detected.............. 107
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 54 44 1 2
30 to 39 2 3 0 0
40 to 49 1 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 57 47 1 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290523|gb|AE003432.1|AE003432 Drosophila melanogaster genomic scaffold 142000013386054 section 16 of 35, complete sequence
Position Repeat-length Repeat
19 28/31 TTTTTTTTTTTTTTTTTTTTTTTTTTTATCG
7565 20/22 TTTTTTTTTTTGTTTTTCTTTT
8151 24/26 TTTTTTTTTTTTTTTTTTTCTTATTT
9174 23/25 AAAAAGAAAATAAAAAAAAAAAAAA
11354 21/23 AAAAAAAAAAACCAAAAAAAAAA
14859 21/23 TTTTTTTTTTTTTTTTTTTTTGG
17199 19/21 CCCCCCCCCCCACCCCCCCCA
20437 25/27 AAAAAAAAAAAAAAAAAAAAAAAACTA
29937 19/21 TTTTTATTTTTTTTTTTTTTG
30637 32/35 TTTTTTTTTTTTTTGTGTTTTTTTTTTTTTTGTTT
31396 22/24 TTTTTTTTTTTTTTTTTTTTTTAC
41286 18/20 TTTTTTTTTTTTATTTTTGT
50146 23/25 AAAAAAAAAAAAAAAAACAACAAAA
51851 18/20 AAAAAAAAAAAAAAACGAAA
53723 22/24 AAAAAAAAACAAAAAAAAAAAAAC
58508 19/21 GGGGGGGGGGGCGGGGGGGGT
61315 24/26 AAAAAAAAAAAAATAAAAAAAAATAA
61471 18/20 GGGGGGGGGGGGCGGGGTGG
75358 23/25 TTTTTGTTGTTTTTTTTTTTTTTTT
85991 20/22 TTTTTTTTTTTTTTTTTTTTGC
91475 30/33 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACG
96924 26/28 AAAAATAAAAAAAAAAAAAAACAAAAAA
103297 18/20 TTTTTTTTTTTCTTTTTTTG
111144 19/21 AAAAAAAAAAACAAAAAACAA
117567 22/24 TTTTTTTTTTTTTTTTTTTCATTT
140292 25/27 TTTTTTTTTTTTTTTTGTTTTTGTTTT
140808 18/20 TTTTTTTTTTTTTTTTTCCT
150404 18/20 TTTTTTTTTTTTTTTTGTTC
150701 22/24 AAAAAAAAAAAAAAAAAACAGAAA
153366 18/20 TTTTTTTCGTTTTTTTTTTT
154704 19/21 TTTTTTTTATTCTTTTTTTTT
157724 18/20 AAAAAAAAAAAACAAAAAAC
160544 27/30 TTTTTTTTTTTTTTTTTTTTTTTTGTTTGC
164414 19/21 CCCCCCCCCCCCCTCCCCCCA
165418 19/21 GGGGGGGGGGGGGGGGGTGGC
166562 20/22 AAAAAAAAAAATAAAATAAAAA
169424 22/24 TTTTTTTTTTTTTTTCTTTTCTTT
172014 23/25 AAAAAAAAAAATAAAAAAATAAAAA
176804 20/22 AAAAAAAATAAAAAAAAAAATA
183342 21/23 TTTTTTTTCATTTTTTTTTTTTT
189952 25/27 TTTTTTGTTTGTTTTTTTTTTTTTTTT
190113 18/20 AAAAAAAGAGAAAAAAAAAA
200358 18/20 TTTTTATTTATTTTTTTTTT
204505 18/20 TTTTTTTTTGTTTTTTTTTC
214120 23/25 AAAAAACAAAAAAAAAAAAAAAACA
217551 19/21 TTTTTTTTTCTTTTTTTTTTG
226796 22/24 AAAAAAAAAAAAAAAAAAATATAA
228423 23/25 TTTTTTTTTTTTTTTTCCTTTTTTT
231860 19/21 TTTTTTTTTTTTTTTTTTTGC
232482 20/22 TTTTTTTTTTTTTTTTTTTTGC
234957 18/20 AAAAAAAAATAAAAAAATAA
242036 19/21 TTTTTTTTTTTTTTTTAGTTT
242279 18/20 TTTTTTTTATATTTTTTTTT
242504 22/24 AAAAAACAATAAAAAAAAAAAAAA
245237 23/25 TTTTTTTTTTGTTTTTTTTTTTTTG
251843 18/20 AAAAAAAAAAAAAAAAACTA
256286 19/21 TTTTTTTCTTTTTTTTTTTAT
269709 23/25 AAAAAAAAAAAAAAAAAAAAACAGA
270252 18/20 AAAAAAAAAAAAAACAAAAC
277706 21/23 TTTTTTTTTTTTTTTTTTTTTAA
278147 21/23 TTTTTTTTTCTTTCTTTTTTTTT
278555 20/22 TTTTTTTTTTTTTTTTTCTTTA
279247 19/21 TTTTTTTTTTTTTGTTTTTTG
281904 19/21 TTTTTTTTTTTTTTTTTTTAA
299409 19/21 TTTTTTTTTTTTTTTTATTTA
300679 18/20 TTTTTGTTTTTTTTTTTTTG
301591 24/26 TTTTTATTTTTGTTTTTTTTTTTTTT
301910 19/21 AAAAAAAAAAGAAAAAAAAAT
302883 25/27 TTTTTTTTTTTTTTTTTTTTTTTTTGA
304064 18/20 AAAAAAAAAAAAAAAAAATC
304370 20/22 AAAAAAAAAAAAAAAAAAGACA
305480 19/21 AAAAAAAAAAAAAAAAAAATT
306413 26/28 TTTTTTATTTTTTTTTTTTTTCTTTTTT
309577 18/20 TTTTTTTTTTTTTTTTTGTC
310924 25/27 TTTTTTTTTTCATTTTTTTTTTTTTTT
313488 18/20 AAAAAAAAAAATTAAAAAAA
313893 21/23 TTTTTTTTTTTTTTTTTTTTTAA
314247 19/21 AAAAACAAAAAAAAAAAAAAC
318362 18/20 AAAAACAAAACAAAAAAAAA
318497 21/23 TTTTTTTTTTTTTTTTTTTTTGC
318920 22/24 TTTTTTTTTTGTTTTTTTTTTTAT
----------------------------------------------------------------------------
Total sequence length......................... 319596
Total number of repeats detected.............. 81
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 29 43 3 2
30 to 39 0 4 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 29 47 3 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290491|gb|AE003431.1|AE003431 Drosophila melanogaster genomic scaffold 142000013386054 section 15 of 35, complete sequence
Position Repeat-length Repeat
505 22/24 TTTTTTTTTTCTTTTTTTTTTTTG
6848 23/25 AAAAAAAAAAAAAAAAAAAAAAACT
9685 18/20 TTTTTTTTTTTTTGGTTTTT
11850 26/28 AAAAAAAAAAAAAAAAAAAAAAACCAAA
12037 23/25 AAAAAAAAAAAATATAAAAAAAAAA
12625 21/23 TTTTTGATTTTTTTTTTTTTTTT
15646 21/23 TTTTTTCTTTGTTTTTTTTTTTT
15758 18/20 CCCCCCCCCCCCCCCCCCGT
18050 31/34 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTG
20350 18/20 AAAAAAAAAAAGAGAAAAAA
23949 21/23 TTTTTTTTTTTTTTTTCGTTTTT
24948 21/23 AAAAAAGAAAAAAAAAAAAAAAC
27009 18/20 TTTTTTTTTTTGTTATTTTT
27132 19/21 TTTTTTTTATTTTTTTTTATT
28691 20/22 GGGGGGGGGGGGGGAGAGGGGG
40490 21/23 TTTTTTTTTTTTTTTTTTTGTAT
41426 23/25 AAAAAAAAAAAAAAAACAAAACAAA
41612 23/25 AAAAAAAAACTAAAAAAAAAAAAAA
43298 21/23 TTTTTTTTTTTTTTTTGTGTTTT
43586 18/20 TTTTTCCTTTTTTTTTTTTT
44840 20/22 TTTTTCTTTTTTTTTTTTTTTG
45669 20/22 AAAAACAAAAAATAAAAAAAAA
46617 19/21 TTTTTTTATTCTTTTTTTTTT
46849 19/21 AAAAAAAAAAAACAGAAAAAA
49148 21/23 TTTTTTTTTTTTTTTTGTTTTTC
51868 25/27 AAAAAAAAAAAAAAAACAAAAAAAAAC
52490 28/31 TTTTTTTTTTTTGGTTTTTTTTTTTTTTTTG
53434 19/21 CCCCCCCCCCCCCTCCTCCCC
56534 31/34 AAAAAAAAATAAAAAAAAGAAAAAAAAAAAAACA
59019 30/33 AAAAAAAAAAAAAAATAAAATAAAAAAAAACAA
59427 25/27 AAAAAAAAAAAAAAAAAAAGAGAAAAA
59477 21/23 AAAAAAAAAAAAAAAAAAACACA
64340 18/20 AAAAAAAAAAAAAAAAAATG
66665 23/25 TTTTTTTTTTTCGTTTTTTTTTTTT
67743 18/20 TTTTTTTTTTTTTTATTATT
68005 25/27 AAAAAAAAAAAAAAAGAAGAAAAAAAA
70057 18/20 AAAAAAAAAAAAATAGAAAA
71071 24/26 AAAAAAAAAAAAAAAAAAAAAATAGA
72404 20/22 TTTTTTTCTTTTTTTTTTTATT
72804 26/28 TTTTTTTTTTTTTTTTTTTTTTGCTTTT
77342 29/32 AAAAAAAAAAAAAAAAAAAAAAAAAGGAAGAA
79697 19/21 TTTTTTTTTTTTTTTTTTGCT
82626 23/25 AAAAACAAAATAAAAAAAAAAAAAA
84235 18/20 TTTTTTGTTTTTTTTTTTGT
84324 20/22 TTTTTTTTTTTTTTTTTTTTGA
89369 19/21 AAAAAAAAAAAAAAAAAATAG
91147 23/25 TTTTTTTTTTTTTTTTTTTTTTGCT
96295 24/26 AAAAAAAAAAAAAAAAAACAAACAAA
100490 20/22 AAAAAAAAAACAAAAAAAAATA
109439 18/20 AAAAAAAATGAAAAAAAAAA
150919 19/21 TTTTTTTTTTCCTTTTTTTTT
155397 25/27 TTTTTTTTTTTTTTTGCTTTTTTTTTT
157042 22/24 TTTTTTTTTTTTTTTTTTTTGTCT
165735 23/25 AAAAAAAAAACACAAAAAAAAAAAA
167380 25/27 AAAAACAAAAAAAACAAAAAAAAAAAA
174704 21/23 AAAAAAAAAACGAAAAAAAAAAA
180573 19/21 TTTTTTTTTTGTTTTTGTTTT
181277 20/22 AAAAAAAAAAAAAAAAAAAAGC
183353 22/24 TTTTTATTTTTTTTTTTTTTTTGT
199854 22/24 TTTTTTTTTTTTTTTGTTTTTTTC
219267 20/22 AAAAAAAAAAAAACAAAAAAAC
221037 20/22 AAAAAAAAAAAAAAAAAATACA
221621 20/22 AAAAAAAAAACAAAAAAAAAAT
225949 20/22 GGGGGGGGGGGGGGGGAGGTGG
236898 23/25 AAAAAAAAAAAGAAAAAAAAAACAA
256348 24/26 AAAAAAAAAAACAAAAAACAAAAAAA
265421 26/28 AAAAAAAAAAAAAAATAAAGAAAAAAAA
272260 26/28 TTTTTTTTTTTTTTTTTGTTTTTTGTTT
272545 18/20 TTTTTTTTTTTTTGTTTTTA
273175 22/24 TTTTTTATTTTTTCTTTTTTTTTT
275155 19/21 TTTTTTTTTTTTTTTTTTTGG
275325 19/21 AAAAAAAAAAAAAAAAAATAG
277695 21/23 AAAAACAAAAAAAAAACAAAAAA
281575 29/32 TTTTTTTTTTGTTTTTTTTTTTTTTTTTTTGG
282277 18/20 AAAAAAATAAAAAAAAAAAC
283930 20/22 TTTTTTTTTTTTTTTTTTCGTT
285724 20/22 TTTTTTTTTTTTATTTTTATTT
287054 23/25 AAAAAAATAAAAAAAAATAAAAAAA
287925 19/21 AAAAAAAAAAAAAAAAAAAGT
288092 20/22 TTTTTTTTTTTTTTTTTATTTC
303019 23/25 TTTTTTTCTTTTTTTTTTTTTTTTA
----------------------------------------------------------------------------
Total sequence length......................... 311408
Total number of repeats detected.............. 81
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 36 35 2 2
30 to 39 3 3 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 39 38 2 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290460|gb|AE003430.1|AE003430 Drosophila melanogaster genomic scaffold 142000013386054 section 14 of 35, complete sequence
Position Repeat-length Repeat
23299 23/25 AAAAAAAAAAAAAAATAAAAAAAAT
25559 21/23 TTTTTTTTTTTTTTTTCTGTTTT
35309 18/20 AAAAAAAAAAAAAGAAAACA
38831 21/23 TTTTTTTTTTTTTTTTATTTTGT
44456 20/22 TTTTTTTTTTTTGTGTTTTTTT
44964 18/20 TTTTTTTTTTTTTTTTGTTA
46214 19/21 TTTTTTTTTTTTTTTTTTTGG
46939 20/22 TTTTTTTTTTTTTTGATTTTTT
54014 19/21 TTTTTTTTTTTTTTTTTTTGG
55887 20/22 AAAAAAAAAAAAAAAAAAAACC
56218 23/25 TTTTTTTTTGTTTTTTTTTTCTTTT
59920 21/23 TTTTTGTGTTTTTTTTTTTTTTT
61916 18/20 TTTTTATTTTTTTCTTTTTT
71843 21/23 AAAAAAAAAAACGAAAAAAAAAA
77930 19/21 AAAAAAAAAAAAATAATAAAA
80877 23/25 TTTTTGTTTTTTTTTTTTTTTTTTG
82815 19/21 AAAAAAAAAAAAAAAAAAATT
92909 19/21 TTTTTTTTTTTTTTTTTTGTA
93053 22/24 AAAAAAAAAAAAAAAAAAAAAACG
95362 33/36 TTTTTTTTTTTTTTTTTTTTTTTTTTTGATTTTTTG
105549 24/26 AAAAAAAAAAAGAAAAAAAAAAACAA
110042 18/20 TTTTTTTTTTTTTTTGTTCT
112786 26/28 TTTTTTTTTTTTTTTTTTTTTTTTGTTG
117243 20/22 TTTTTTTTTTTTTTTTGTCTTT
130891 18/20 AAAAAAAAAAAAATGAAAAA
151466 21/23 AAAAAAAAAACAAAAAAAAAATA
172634 19/21 CCCCCCCCCCCCCCCCCACCA
199960 18/20 TTTTTTTTTTTTTTTTCTCT
201303 21/23 TTTTTTTTTTTTTATTTTTTTGT
201501 19/21 AAAAAAAATGAAAAAAAAAAA
202912 18/20 TTTTTTTTTTTTGTTTTCTT
209077 21/23 AAAAAAAAAAAAACAAAGAAAAA
212917 19/21 AAAAAAAAAAAAAAATGAAAA
215501 22/24 TTTTTTTTTTTTTTTTTTTTTTGC
217225 23/25 AAAAAAAAAAAAAAAAAACCAAAAA
217641 18/20 CCCCCCCCCCCCCCCCATCC
235757 18/20 TTTTTTTTTGTTTTGTTTTT
237949 19/21 TTTTTTTTTTTGTTTTGTTTT
240262 26/28 AAAAAAAAAAAAAAAAACCAAAAAAAAA
243182 23/25 AAAAACAAAAAAAAAAAACAAAAAA
247146 22/24 TTTTTTTTTTTTTTTTTGTTTTTG
247293 25/27 TTTTTTTTATTTTTTTTTTTTTTTTTG
247592 22/24 TTTTTTTCTTTTTTTTTTTTTTTG
290614 22/24 TTTTTACTTTTTTTTTTTTTTTTT
293800 26/28 AAAAAAAAAAAAAAAAAAAACAAAATAA
----------------------------------------------------------------------------
Total sequence length......................... 294292
Total number of repeats detected.............. 45
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 17 25 0 2
30 to 39 0 1 0 0
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 17 26 0 2
----------------------------------------------------------------------------
Genomic Sequence:
gi|7290438|gb|AE003429.1|AE003429 Drosophila melanogaster genomic scaffold 142000013386054 section 13 of 35, complete sequence
Position Repeat-length Repeat
22326 20/22 TTTTTATTTTTGTTTTTTTTTT
48347 20/22 TTTTTTTTTTTGTTTTTTATTT
62327 18/20 TTTTTCTTTTCTTTTTTTTT
96304 24/26 TTTTTTTTGTTTTTTTTTTTTTTTGT
98033 18/20 TTTTTTTTTTTTTTCATTTT
110799 18/20 AAAAAAGAAAAAAAAAAAAT
112020 21/23 TTTTTTTTTCTTTTTTTTTTTTG
115728 19/21 TTTTTTTTTTTTTTTTTTTGC
116714 22/24 TTTTTGTTTTTTTTTTTCTTTTTT
124614 22/24 AAAAAAAAAAACAAAAAAAAAAGA
132847 18/20 TTTTTATTTTTTTTTTTTTC
147770 18/20 AAAAAAAAAAATAGAAAAAA
153968 22/24 TTTTTTTTCTTTTTTTTTTTTTTG
157529 27/30 AAAAAAAAAAAAAAAAACCAAAAAAAAAAC
158059 18/20 AAAAAATAAAAAAATAAAAA
158961 18/20 AAAAAAAAAAAAACAAAACA
168722 21/23 AAAAAAAAAAAAAAAACCAAAAA
176709 19/21 AAAAAAAAAAAAAAAACAAAT
176909 19/21 TTTTTTTTTTTTTTTTTTGTA
177468 21/23 TTTTTTTTTCTTCTTTTTTTTTT
177883 21/23 AAAAACAAAAAAAAAACAAAAAA
178422 18/20 AAAAAAAAAAAAAAAACAGA
183007 18/20 AAAAAAAAAAAAAAAAAAGG
183142 30/33 TTTTTTTTTTTTTTTTTTTTTTTTAATTTCTTT
197797 20/22 AAAAAAAAAAAAAAACAAAATA
200533 19/21 TTTTTTTGTTTTTTTTGTTTT
201229 20/22 CCCCCCCCCCCCCCCAACCCCC
206966 21/23 AAAAAAAAAAAAAATAAAAAAAG
209686 20/22 AAAAAAAAAAGAAAAAAAAAAG
210052 18/20 CCCCCCCCCCCCCCCCCCGT
212883 21/23 AAAAAAAAAAAAGAAAAAAATAA
214889 21/23 AAAAAAAAAAAAAAAAACAAAAC
224436 25/27 TTTTTTTTTTTTTTTTTTGTTCTTTTT
232251 19/21 TTTTTGCTTTTTTTTTTTTTT
238241 18/20 TTTTTTTTTTTTTTTTGTTG
240832 18/20 TTTTTTTTTTTTTTTTAATT
244562 19/21 AAAAAAAAAAAAGAAAAAGAA
249203 21/23 AAAAAAAAAAAAAAAAAAAAATG
249336 19/21 TTTTTTTTATTTTTTTATTTT
250781 23/25 TTTTTTTTTTTCTCTTTTTTTTTTT
254261 30/33 TTTTTTTTTATTTTTTTTTTTTTTTTTATTTGT
259631 23/25 AAAAAAAAAAAATATAAAAAAAAAA
260135 19/21 TTTTTTTTTTTTTTTTTACTT
262682 19/21 TTTTTCTTTCTTTTTTTTTTT
264144 20/22 AAAAAAAAAAACAACAAAAAAA
264356 24/26 TTTTTTTTTTTTATTTTTTTTTTTAT
264894 19/21 AAAAAAAAAAAAAAACTAAAA
267062 22/24 AAAAAAAAAAGAAGAAAAAAAAAA
267829 23/25 TTTTTTTGTTTTTTTTTTTTTTTAT
268909 25/27 AAAAAAAGAAAAAAAAAAAACAAAAAA
271191 19/21 AAAAACAAAAAAAAAAAAACA
289487 21/23 AAAAAAAAAAGAAAAAAAAAAAT
291576 30/33 AAAAAAAAAAAAAACAAAAAACAAAAAAAGAAA
292486 30/33 TTTTTTTTTTTTTGTTTTTTTGTTTTTTTTTCT
295572 23/25 TTTTTTTTTTTTTTTTTTTTTTGGT
----------------------------------------------------------------------------
Total sequence length......................... 297405
Total number of repeats detected.............. 55
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------