Di-Nucleotide Repeats in Genomic Sequences
Di-Nucleotide Repeats in
C. elegans Chromosome-X complete sequence
Genomic Sequence:..
lcl|chr_X
Position Repeat Coverage Repeat
31967 TA * 41 74/82 TA CA CA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TC AG CT TT
72884 TA * 26 47/52 TA CA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA GC CG
98480 AG * 10 18/20 AG AG AG AG GG AG AG AG AT AG
117253 AT * 10 18/20 AT AT AT AT AT CA AT AT AT AT
131124 TA * 16 29/32 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TT GG
151272 TA * 12 22/24 TA CG TA TA TA TA TA TA TA TA TA TA
162684 TG * 10 19/20 TG TG TG TT TG TG TG TG TG TG
168257 GA * 10 18/20 GA GT AA GA GA GA GA GA GA GA
170978 AG * 10 18/20 AG AG AG AG AG AG AG AG GG GG
194771 GT * 12 22/24 GT GT GT GT GT GT GT GT GA GT GT CT
210500 TA * 25 45/50 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TT TA TA TA TT TT TG TA AA
238172 TA * 31 56/62 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TG AT CA TC TT
238537 TC * 11 20/22 TC TC TC TC TC TC TC TT TC TC TG
243559 AT * 12 22/24 AT AT TT TT AT AT AT AT AT AT AT AT
335969 AC * 13 24/26 AC AC AG AC AC AC AC AC AC AC AC AC AA
355375 AT * 11 20/22 AT AT AC AT AT AT AT AT AT AT TT
359644 TG * 10 19/20 TG TG TG TG TG TG TG TG TG TC
363266 TC * 10 18/20 TC TC TC CT TC TC TC TC TC TC
368899 TA * 12 22/24 TA TA TA TA TA TA TA TA TA TA TT TT
399180 TA * 41 75/82 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TG GA CT AT TG
404714 AT * 10 18/20 AT AT AT AT AT AT AT AG GT AT
452619 AG * 10 18/20 AG AA AG AG AG AG AG AG AA AG
511526 AC * 21 38/42 AC AA AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC CG AG AC
561858 AG * 10 18/20 AG GG CG AG AG AG AG AG AG AG
675019 GA * 12 23/24 GA GA GA GA GA GA GA GA GA GA GA GC
718825 GA * 22 40/44 GA AA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA AG AA
727553 AG * 10 18/20 AG CG AG AG AT AG AG AG AG AG
727972 AG * 15 27/30 AG AG AA AG AG AG AG AG AG AG AG AG AC AG CG
752784 CA * 10 19/20 CA CA CA CA CA CA CA CA CA CC
752929 GA * 10 18/20 GA GA GA GA GA GA AG GA GA GA
799965 AT * 10 19/20 AT AT AT AT AT AT AT AT AT AC
802202 AT * 19 35/38 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AC CA
822963 CA * 18 33/36 CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA AA GG
838091 CT * 11 20/22 CT CT CT CT CT CT CT CT CT CT TG
854699 AG * 10 18/20 AG AG AG AC AG AC AG AG AG AG
912288 AT * 18 33/36 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT TG AA
933300 GA * 10 19/20 GA GA GA GA GA GA GA GA GA GC
956710 AG * 10 19/20 AG AA AG AG AG AG AG AG AG AG
958497 AG * 23 42/46 AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG CA CT
1007350 AT * 16 30/32 AT AT AT AT AT AT AT AT AT AT AT GT AT AT AT TT
1026287 TA * 21 39/42 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TT CT
1045682 GA * 17 31/34 GA GA GA AA GA GA GA GA GA GA GA GA GA GG GA GA AA
1054052 CA * 12 22/24 CA CA CA CA CA CA CA CA CA CA CA TC
1071983 TA * 10 18/20 TA TA CA TA TA TA TA CA TA TA
1079626 TA * 12 22/24 TA TA TA TA TA TA TA TA TA TA TG GA
1163502 CA * 17 31/34 CA CA CA CA CA CA CA CA CA CA CA CA CA CA GG CA GA
1183062 AT * 28 51/56 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT TA AT AT TA AA
1198160 AT * 11 20/22 AT AT AT AT AT AT AT AT AG AA AT
1254464 TC * 21 38/42 TC TC TC TC TC TC TC TC TC TC TC TC TC TT TC AC TC TC TC TA TA
1313043 TC * 11 20/22 TC AC TC TC TC TC TC TC TC TC CC
1332450 CA * 11 20/22 CA TC CA CA CA CA CA CA CA CA CA
1346668 CT * 16 29/32 CT CT CT TT CT CT CT CT CT CT CT CA CT CT CT TT
1466159 AT * 11 20/22 AT AT AC AA AT AT AT AT AT AT AT
1540624 AT * 18 33/36 AT GT AT AT AT AT AT AT AT AT AT AT AT CT AT AT AT AA
1881979 GT * 11 20/22 GT GT GT GT GT GG TT GT GT GT GT
1950171 CA * 12 22/24 CA CA CA CC CA CA CA CA CA CA CA CC
1950532 TG * 10 18/20 TG TG TG TA TG TG TG TG TG TT
1973811 AG * 10 18/20 AG AG AG AG AG GG AG AG AG AT
2007232 AT * 11 20/22 AT AT AT AT AT AT AT AT AT AA AC
2057332 AG * 11 21/22 AG AG AG AG AG AG AG AG AG AG AC
2073964 AG * 10 18/20 AG AG AG AG AG TG AG AG AG GG
2089786 AC * 10 18/20 AC AC AC AC AC AC AC TT AC AC
2098797 CA * 10 18/20 CA CT CA CA CA CA CA CA CT CA
2103268 AT * 11 21/22 AT AT AT AT AT AT AT AT AT AT AA
2103324 TA * 12 23/24 TA TA TA TA TA TA TA TA TA TA TA TG
2104883 AC * 23 43/46 AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC TA TC
2171791 CT * 13 24/26 CT TT CT CT CT CT CT CT CT CT TT CT CT
2197733 AC * 10 18/20 AC AC AC AC AC AC AC AC TT AC
2232225 GA * 13 24/26 GA AA GA GA GA GA GA TA GA GA GA GA GA
2254459 AC * 11 20/22 AC AC AG GC AC AC AC AC AC AC AC
2257762 AT * 12 22/24 AT AG AT AT AT AT TT AT AT AT AT AT
2267936 AT * 16 30/32 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AA AC
2268557 CA * 15 27/30 CA CA CA CA CA CA CA CA CA CA CA CA CA TT AA
2268792 AC * 11 20/22 AC AC AC AC AC AC AC AG AC AT AC
2275456 TC * 21 38/42 TC TC TC TC TC TC TC CC TC TC TC TC TC TC TC AC TC TG TC TT TC
2284749 AT * 15 27/30 AT AT AT AT AT AT AT AT AT AT AT AT TT GT TT
2291321 AC * 13 24/26 AC AC AC GC AC AC AC AC AC AC AC AA AC
2315494 CT * 39 71/78 CT CT TT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT TT CT CT CT CT GT CA AA AT
2330639 CA * 10 18/20 CA CA CA CA CA CA CA CA AA CG
2337860 CA * 10 18/20 CA CA CA TA CA CA TA CA CA CA
2348028 AT * 11 21/22 AT TT AT AT AT AT AT AT AT AT AT
2362334 GT * 11 20/22 GT GT GT GT AT GT GT GT GT CT GT
2366973 TG * 11 20/22 TG TG AG TG TG TG TG TG TG TA TG
2395731 AC * 10 18/20 AC AT AC AC AC AC AC AC AC GC
2443936 CA * 13 24/26 CA CA CA CT CA CT CA CA CA CA CA CA CA
2445066 TG * 11 20/22 TG TT TG TG TG TG TA TG TG TG TG
2446826 AC * 13 25/26 AC AC AC AC AC AC AC AC AC AC AC AC AA
2468103 AC * 10 18/20 AC AC AC AC AC AC AC AC AG AA
2468941 AC * 11 20/22 AC AC AC AC AC AT AC AC TC AC AC
2488114 TG * 14 26/28 TG TG TA TG TA TG TG TG TG TG TG TG TG TG
2513553 TG * 10 18/20 TG TG TG TG TG TG TC TG TG TA
2591583 CA * 12 22/24 CA CA CA CG CA CA CA CA CA CA AA CA
2604597 GA * 12 22/24 GA GC GA GA GA GA GA GA GA GA GA GC
2610035 TG * 11 20/22 TG TG TG TG TG TG TG TG TG TG CC
2616521 CA * 12 22/24 CA CA CA CA TA CA CA CA CA CA CA AA
2624271 AC * 13 24/26 AC AC AC AC AC AC AC AC AC AC GC AC GC
2630337 CA * 10 19/20 CA CA CA CA CA CA CA CA CA CT
2640076 CA * 10 18/20 CA CA CA CA CA CA TA CA CA AA
2642707 CA * 10 18/20 CA AA CA AA CA CA CA CA CA CA
2642803 TC * 11 20/22 TC TC CT TC TC TC TC TC TC TC TC
2643079 TG * 12 22/24 TG TA TG TG TG TG AG TG TG TG TG TG
2646343 TG * 16 29/32 TG TG CG TG TG TC TG TG TG TG TG TG TG TG TA TG
2709710 TC * 13 24/26 TC TC TC TC TC TC TC AC TC TC TC TC TA
2709985 TC * 13 24/26 TC TC TC TC TC TC TC TC TT TC TC TC TA
2728925 AG * 18 33/36 AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AA TC
2812858 AT * 17 31/34 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AA TC
2819050 AC * 25 45/50 AC AT AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC CC AC AT AT AC AC AT
2819587 CA * 10 18/20 CA CA CA CA CA CA CA CT GA CA
2868310 AC * 11 20/22 AC TC AC AA AC AC AC AC AC AC AC
2880212 CA * 16 29/32 CA CA CA CA CT CA CA CA CA CA CA CA CT CA CA AA
2941208 TC * 12 22/24 TC TC TC TC TC TC TC TC TC TC TG TT
2975571 AC * 10 18/20 AC AA AC AC AC AC AC AT AC AC
2979488 TG * 11 20/22 TG CG TG TG TA TG TG TG TG TG TG
3068527 GT * 10 18/20 GT GT TT GT GT GT GT GG GT GT
3081736 AC * 10 18/20 AC GC AC AC AC AC AC AC AC AA
3183352 CA * 11 20/22 CA CA TA CA CA CA CA CA CA CA AA
3203692 GT * 12 22/24 GT GT GG GT GT GT AT GT GT GT GT GT
3212702 GT * 11 20/22 GT GT TT GT GT GT GT GT AT GT GT
3216583 TG * 14 26/28 TG TA TG TG TG TG TG TG TG TG TG AG TG TG
3224796 GA * 11 20/22 GA GA GA GA GA TA GA GG GA GA GA
3258984 GA * 12 23/24 GA GA GA GA GA GA GA GA GA GA AA GA
3259135 TG * 13 24/26 TG TA TG TG TG TA TG TG TG TG TG TG TG
3332463 AT * 10 19/20 AT AA AT AT AT AT AT AT AT AT
3368933 TA * 10 18/20 TA TA TA TA TA TC TC TA TA TA
3446749 AC * 12 22/24 AC AC TC AC AC AC AC GC AC AC AC AC
3446816 AC * 10 18/20 AC AC AC AA AC AC GC AC AC AC
3457765 TG * 11 20/22 TG TG TG TG TG TG TG TG TG TG GT
3460331 GT * 11 20/22 GT GT GT GT GT GT GT GT GT GT AA
3534438 AT * 10 18/20 AT AT AC AT AT AC AT AT AT AT
3535625 TA * 61 110/122 TA AA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TT GT TA TG AT AA TA AT TG GA
3574208 GT * 15 27/30 GT GT GT GT GT GT GT GT GT GT GT GT GT GC CA
3590228 GT * 15 28/30 GT GA GT GT GT GT GT GT GT GT GT GT GT GT TT
3620369 TC * 14 26/28 TC TC GC TC TC TC TC TC TC TC TC TC TC TA
3642844 AC * 13 24/26 AC AC AC AC AC AC AC AC AC AC AC AA AA
3651279 TG * 11 20/22 TG TG TG TG TG TA TG TG CG TG TG
3653987 GA * 11 21/22 GA GA GG GA GA GA GA GA GA GA GA
3682999 GA * 12 22/24 GA GA GA GG GA GA GA GA GA GA GA AA
3706185 TA * 10 18/20 TA TA TA TA TA TA TA TA TT CA
3710215 AC * 18 33/36 AC AT CC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AT
3738156 GT * 11 20/22 GT GT GT GT GT GT GT GT GT TT TT
3748535 GA * 16 29/32 GA GA GA GA GA GA GA GA GA GA CA GA GA GA GA TT
3775429 CT * 91 165/182 CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CG AA TA AA AT GG GA CT TT TT TG CA
3824112 TA * 10 18/20 TA AA AA TA TA TA TA TA TA TA
3870877 AT * 14 26/28 AT AT AT AT AT AT AT AT AT AT AT AT AT GA
3889464 TG * 11 21/22 TG TG CG TG TG TG TG TG TG TG TG
3894895 AC * 11 20/22 AC AC AC AT AC AC AC AC AC AC GC
3903971 GT * 10 18/20 GT AT GT AT GT GT GT GT GT GT
3907301 CA * 20 36/40 CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA TT TT
3932162 TG * 12 22/24 TG TG TG TG TG TG TG TG TG TG TG GA
3960264 AG * 10 18/20 AG AG AG AA AG AG AG AG AG AC
3963649 AG * 10 18/20 AG AA AG AG AG AG TG AG AG AG
4032590 AT * 13 24/26 AT AT AT AT TT AT AT AT AT AT AT AT AA
4050026 CA * 15 28/30 CA CA CA CA CA CA CA CT CA CA CA CA CA CA AA
4071603 TC * 26 47/52 TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TT CT CA
4128016 CA * 10 19/20 CA CA CA CA CA CA CA TA CA CA
4140294 AT * 10 18/20 AT AT AT AT AT AT AT TA AT AT
4140796 GT * 10 19/20 GT GT GT GT GT GT GT GT GT GG
4175379 AT * 13 24/26 AT AT AT AT AT AT AT AT AT AT GT AT TT
4259341 TC * 12 22/24 TC TC TC TC TC TC TC TC TC TT TC CC
4259589 CA * 11 21/22 CA CG CA CA CA CA CA CA CA CA CA
4259617 TG * 12 22/24 TG TG TG TG TG TG AG TG TG AG TG TG
4284640 AC * 10 18/20 AC AC AC AC TC AC AC AC AC AG
4326610 CA * 10 18/20 CA CA CA CA CA CA CA CA CG AA
4332722 TA * 16 30/32 TA TA TA AC TA TA TA TA TA TA TA TA TA TA TA TA
4358882 TG * 87 157/174 TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG GC CC AT CT TT CT TT AC AG AG TC
4415194 AG * 77 139/154 AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AA AG AG AG AA GG AG AG TA AT AG GA AA AG GT AG TG CA AT
4430787 TG * 10 19/20 TG TG TG TG TG TG TG TG TG AG
4452520 GA * 12 22/24 GA AC GA GA GA GA GA GA GA GA GA GA
4493813 GT * 11 21/22 GT GT GT GT GT GT GT GT GT GT GG
4555601 AT * 10 18/20 AT AT AT AT AT AT AT AT AT TA
4565683 CA * 11 20/22 CA CC CC CA CA CA CA CA CA CA CA
4613906 CA * 10 18/20 CA AA CA CA CA CG CA CA CA CA
4702469 CT * 11 20/22 CT CC CT CT CT CT CT CT CT CT TT
4711364 CA * 12 22/24 CA CA CA CA CA CA CA CA CA CA CA AT
4714793 CA * 29 53/58 CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA AA CA CA GA GA GA CA TA CA CA CA
4723881 AG * 10 18/20 AG AG AG AG AG AG AG AG AT GG
4724087 AC * 10 18/20 AC AC AC AC AC AC AC AC AT TC
4731094 AG * 13 24/26 AG AG AG AG AG AG AG AG AG AG AG AA AT
4733539 CA * 12 23/24 CA CA CA CA CA CA CA CA CA CA CA CC
4734475 AG * 35 63/70 AG TG AG AA AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG CA CG GC
4782834 CA * 10 18/20 CA CA CA CA CA CA CA CA GA AA
4874376 CA * 12 22/24 CA CA CA CA GA CA CA CA CA CA TA CA
4963111 AG * 17 31/34 AG AG AG AG AG AG AG AG AG AG AG AG AC AG TG AG AT
4965174 TC * 10 18/20 TC TC TC TC AC TC TT TC TC TC
5088859 AC * 10 18/20 AC AC AT AC AC AC AC AA AC AC
5107050 AG * 10 18/20 AG AG AA AG AG AG TG AG AG AG
5212601 CA * 14 26/28 CA CA CA CA CA CA CA CA CA CA CA CA CA GC
5213786 TG * 17 31/34 TG TG TG TA TG TG TG TG TG TG TG TG CG TG TG TT TG
5321280 CA * 10 18/20 CA CA CA CA CA CA CA GA CA AA
5382283 TG * 15 28/30 TG TG TG TG AG TG TG TG TG TG TG TG TG TG GG
5392522 TG * 10 18/20 TG TG TG TG TG TG TT CG TG TG
5461098 TC * 56 102/112 TC TG TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC AT TT TT TC TT TC CT TT TT
5468515 AG * 11 20/22 AG AG AG AG AG AG AG AG AG GG AA
5494990 GA * 10 18/20 GA GA GC GG GA GA GA GA GA GA
5639577 TC * 11 20/22 TC TC TC TT AC TC TC TC TC TC TC
5710582 AT * 12 23/24 AT AT AT AT AT AT AT AT AT AT AT AA
5760114 CA * 10 18/20 CA CA TA CA CA CA CA TA CA CA
5771693 TA * 15 27/30 TA AA TA TA TA TA TA TA TA TA TA TA TA TG TT
5792252 TC * 12 22/24 TC TC TC GT TC TC TC TC TC TC TC TC
5799018 CT * 10 18/20 CT TT CT CT CT CC CT CT CT CT
5870634 AG * 11 20/22 AG CC AG AG AG AG AG AG AG AG AG
5877737 AT * 10 18/20 AT AT AT AT AT AT AC AT AT CT
5882247 CA * 13 24/26 CA CA CA CA CA CA CA CA CA CA CA TT CA
5967308 TA * 18 33/36 TA AA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TC TG
6067867 TC * 10 18/20 TC TC TC TA TC TC TC AC TC TC
6086951 TA * 13 24/26 TA TA TA TA TA TA TA TA TA TA TA AA CA
6335898 AG * 13 24/26 AG AT AG AG AG AG AG AG AG AG AG GG AG
6339020 AT * 46 84/92 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT TT AC AC AC TT AT AA AT GA
6383808 AG * 12 22/24 AG AG AG AG AG AG AG AA AG AG AG AA
6428631 TG * 13 24/26 TG TC TG TG TG TA TG TG TG TG TG TG TG
6433358 TA * 11 20/22 TA AA TA TA TA TA TA TA TA GA TA
6532972 GA * 13 24/26 GA GA GA GA GA GA GA GG GA GA GG GA GA
6577698 TA * 17 31/34 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA AC TT
6581240 TG * 15 27/30 TG TA TG TG TG TG AG TG TG TG TG TG TG TG TT
6793869 AC * 10 18/20 AC AC AC AT AC AC AG AC AC AC
6797273 AT * 13 24/26 AT AA AT AA AT AT AT AT AT AT AT AT AT
6921515 TG * 11 20/22 TG TA TG TG TG TG TG TG TG TG TC
6972645 CA * 12 22/24 CA AA CA CA CA CA CA CA CA CA CC CA
7029634 CA * 11 20/22 CA CA CA TA CA CA CA CA TA CA CA
7029964 AT * 12 22/24 AT AT CC AT AT AT AT AT AT AT AT AT
7127336 TC * 15 27/30 TC TC TC TC TC TC TC TC TC TC TC TC TA TC CG
7251459 TA * 16 30/32 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TT TT
7271103 AT * 11 21/22 AT AT AT AT AT AT AT AT AT AT AA
7275805 AG * 21 39/42 AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AT TT
7293221 GT * 10 18/20 GT AT GT GT GT GT GT TT GT GT
7325658 CT * 13 25/26 CT CT CT CT CT CT CT CT CT CT CT CT TT
7336512 AT * 13 24/26 AT AT AT AT AT AT AT AT AT AT AT AA AG
7363800 TA * 11 20/22 TA TA TA TA TA TA TA TA TA AA CA
7379006 GA * 12 23/24 GA GA GA GA GA GA GG GA GA GA GA GA
7438950 TA * 11 20/22 TA TA TA TA TA TA TA TA TA TT TG
7557307 TG * 12 22/24 TG TG TG TG TG TG TG TG TG TG TG AA
7557731 GT * 12 22/24 GT GT GT GT GT GT GT CT CT GT GT GT
7562938 AG * 10 18/20 AG AT AG AG AG AG AA AG AG AG
7563008 GA * 10 18/20 GA AA GA TA GA GA GA GA GA GA
7583090 AT * 10 19/20 AT AT AT AT AT AT AT AT AT AA
7713849 GT * 12 22/24 GT GT GT GT GT GT CT GT GT GT GT GC
7800268 GT * 10 18/20 GT GT AT GT GT GT AT GT GT GT
7816898 TA * 10 18/20 TA TA TA TA TA TT AA TA TA TA
8074651 AG * 42 76/84 AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG TG TG TG AA CT GA AG AG
8126585 TC * 10 18/20 TC TC TC TC TC TC TC TC TC AT
8238044 CT * 16 29/32 CT TT CT CT CT CT CT CT CT CT CT CT CT CT AT TT
8317465 CA * 15 28/30 CA CA CA CA CA CA CA CA CA CT CA CA CA TA CA
8486438 GT * 13 25/26 GT GT GT GT GT GT GT GT GT GT GT GT GA
8486466 GT * 13 25/26 GT GT GT GT GT GT GT GT GT GT GT GT GA
8486494 GT * 12 23/24 GT GT GT GT GT GT GT GT GT GT GT GA
8554838 TG * 15 27/30 TG TT TG TG TG TG TG TG TG TG TG TG TG TG CA
8630443 TC * 52 94/104 TC AC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TA AC TA TG CA TT TG TA
8632462 AT * 13 24/26 AT AA AT AA AT AT AT AT AT AT AT AT AT
8664820 AT * 10 19/20 AT AT AT AT AT AT AT GT AT AT
8734416 TC * 10 19/20 TC TC TC TC TC TC TC TC TC TG
8788078 TA * 12 23/24 TA TA TA TA TA TA TA TA TA TA TA TC
8802197 TA * 17 31/34 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA AT TT
8821284 AT * 11 20/22 AT AT AT AT AT AT AT AT AT GT TT
8850447 TA * 11 20/22 TA AA CA TA TA TA TA TA TA TA TA
8860250 TG * 12 22/24 TG TG TG TG TG TG TG TA TG TG TG TT
8866528 AC * 12 22/24 AC AC AC AT AC AC AC AC AC AC AC AG
8884243 CT *115 207/230 CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT AT CT CT AT CT CT AT CT CT AT CT CT AT CT CT AT CT CT AT CT CT AT CT CT CT CT CT CT CT CT CT CC TC TC CC CC CG AT TT TT GA TT TT
8990707 GA * 32 58/64 GA CA AA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GC AA AA CA
9000731 TC * 50 91/100 TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC CT CG TG GT CC AC
9036914 GA * 11 20/22 GA GA GA GA GA GA GA GA GA GC GT
9158909 TG * 10 18/20 TG TA TT TG TG TG TG TG TG TG
9226920 AT * 12 23/24 AT AT AT AT AT AT AT AT AT AT AT TT
9318691 TG * 10 19/20 TG TA TG TG TG TG TG TG TG TG
9347990 TC * 10 18/20 TC TC TC CC TC TC TC TC TC TT
9356989 TG * 13 25/26 TG TG TA TG TG TG TG TG TG TG TG TG TG
9384489 AT * 18 33/36 AT AT AT AT AT AT AT AT AT AT AT AT AT AT TG AT AT CT
9632743 AT * 25 45/50 AT GT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT TT AC AT GC
9641594 TC * 10 18/20 TC TC TC CC TC TC TC TC TT TC
9753892 AT * 20 36/40 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AC TG AA
9758746 GA * 11 20/22 GA GA GA AA GA GA GA GA GA GA TA
9765139 CA * 10 18/20 CA CA CA CA CA CA CT CA CG CA
9795371 TC * 10 18/20 TC TC AC TC TT TC TC TC TC TC
9854274 AT * 10 18/20 AT TC AT AT AT AT AT AT AT AT
9884417 AG * 10 18/20 AG AA AG AG AG AG AA AG AG AG
9912098 AG * 10 18/20 AG AG AG AA AG AG AG AG GG AG
9946835 AG * 11 20/22 AG AG AA AG AG AG AG AG AG AG TG
9954197 TG * 10 18/20 TG TG CG TG TG TG TG TA TG TG
9957647 TC * 10 18/20 TC TG GC TC TC TC TC TC TC TC
10080714 AT * 12 22/24 AT TT AT AT AT AT AT AT AT AT AT TT
10125316 AC * 10 18/20 AC AC AC AC AG AC AC AC AG AC
10312810 TC * 78 142/156 TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TA TT CT AA AT TT CT CA CC
10357670 TC * 10 18/20 TC CC TC TC TC TC TC TC TA TC
10357696 TC * 11 20/22 TC AC TC TT TC TC TC TC TC TC TC
10370904 CT * 13 24/26 CT CT CT CT CT CT CT CT CT CT CT CT GA
10416101 TC * 11 20/22 TC TC AC TT TC TC TC TC TC TC TC
10435940 CT * 32 58/64 CT CT CT TT CT CT TT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT AA AA
10463418 GT * 10 18/20 GT GT GT GT GT GT GT GA GT GC
10550111 GA * 12 22/24 GA GA GA GA GA GA GA GA GA AA GA AA
10575284 AT * 11 20/22 AT AT AT AT AT AT AT TT AT AC AT
10619975 AT * 12 23/24 AT AT AT AT AT AT AT AT AT AT AT GT
10624414 TC * 10 18/20 TC TA TC TC TC TC AC TC TC TC
10677608 TG * 11 20/22 TG TG CT TG TG TG TG TG TG TG TG
10765733 AC * 12 23/24 AC AC AC AC AC AC AC AT AC AC AC AC
10772659 CA * 26 47/52 CA CG CA CA CA CA CA CA CA CA CA TA CA CA CA CA CA CA CA TA CA CA CA CT CA TA
10965270 AT * 26 47/52 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AC AT AT AT AT TT AT AT AA AT GG AT
10989712 CA * 12 22/24 CA CA CA CA GA CG CA CA CA CA CA CA
11081184 CA * 10 19/20 CA CA CA CA CA CA CA TA CA CA
11086130 AT * 12 22/24 AT TT AT AT AT AT AT AT AT AT AT TT
11175363 AT * 16 29/32 AT AT AT AT AT AT AT AT AT AT GT AT AT AA AT CT
11211404 TG * 20 36/40 TG CG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TT GT
11288416 GT * 10 18/20 GT GT GT GT AT GC GT GT GT GT
11289404 GT * 10 18/20 GT GT GT AT GT GT AT GT GT GT
11301339 AT * 16 29/32 AT AT AT AT AT AT AT AT AT AT AT AT TT AT TT CT
11340577 TG * 13 24/26 TG TG TG TG TG TG TG TG TG TG TG TT TT
11385507 CA * 98 177/196 CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CC AC AC CT TC TG TC CT TC TT CT CC
11480312 CA * 11 20/22 CA CA CA CA CT CA CA CA GA CA CA
11506265 CA * 11 20/22 CA CA CA CA CT CA CA CA GA CA CA
11542117 AT * 32 58/64 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT CA AC CT GT TT
11582819 AT * 11 20/22 AT AT AT AT AT AT AT AT AT CT TT
11587920 CA * 13 24/26 CA CA AA CG CA CA CA CA CA CA CA CA CA
11640391 AT * 42 77/84 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AC AT AT AT AT AG GT AG TA AA
11681510 TC * 33 60/66 TC TT TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TT AT TT CC
11781370 AG * 12 22/24 AG AG AG AG AG AG AG AG AG AG CC AG
11846618 GA * 13 24/26 GA GA AA GA GA GA GA GA GA GA GA GA CA
11912286 CT * 10 18/20 CT TT CT CT CT CT CC CT CT CT
11937889 CA * 17 32/34 CA CA CA CA CA CA CA CA CA CA CT CA CA CA CA CG CA
12021696 AT * 12 22/24 AT AT AT AT AT AT AT AT AT AC AA AT
12128764 TG * 11 20/22 TG TG TG TG TG TG TG TG TG TT TA
12160142 TG * 15 28/30 TG AG TG TG CG TG TG TG TG TG TG TG TG TG TG
12160230 GT * 13 24/26 GT AT GT GT GT GT GT GT AT GT GT GT GT
12185142 TA * 12 23/24 TA GA TA TA TA TA TA TA TA TA TA TA
12263021 GA * 10 18/20 GA GA GA GA GA GA GA GA GT GT
12276378 AT * 10 19/20 AT AT AT AT AT AT AC AT AT AT
12382372 AC * 11 20/22 AC AC AC TC AC AC AC AA AC AC AC
12398429 AT * 21 39/42 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT TC AA AT
12408055 CT * 12 23/24 CT CT CT CT CT CT CT CT CT CT CT AT
12423221 GA * 11 20/22 GA AA TA GA GA GA GA GA GA GA GA
12443201 CA * 12 22/24 CA TA CA CA CA CA CA CA CA CA AA CA
12467517 TC * 14 26/28 TC TT TC TC TC TC TT TC TC TC TC TC TC TC
12479619 TA * 13 24/26 TA TA TA TA TA TA TA TA TA TA TA TC TC
12480059 CA * 12 22/24 CA CA CA CA CA CA CA CA CA CA CA TT
12510834 CT * 62 113/124 CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT TT GT GT CC CC CG CA GA GC
12518667 AT * 13 24/26 AT AT AT AT AT AT AT AT AT AA AT AT TT
12657224 TG * 11 20/22 TG TA TG TG TG TG TG TG TG TG TT
12662923 AC * 12 22/24 AC AC AC AT AC TC AC AC AC AC AC AC
12672938 TA * 18 33/36 TA TA AA TA TA TA TA TA TA TA TA TA TA TA TA AA TA TT
12771205 AT * 11 20/22 AT AT AT AT AT AT AT AT AT AA AG
12788915 TA * 12 22/24 TA TA TA TA TA TA TA TA TA TA TA AC
12906094 AG * 11 20/22 AG AA AG AG AG AG AG AG AG AG AT
12925096 CA * 10 18/20 CA CA AA TA CA CA CA CA CA CA
12952758 TG * 10 18/20 TG TG TG TG TG AG CG TG TG TG
12958548 CA * 15 27/30 CA CA CA CA CA CA CA CA CA CA TA CA CA CA AG
12979712 CT * 11 20/22 CT CT AT CT CT CT CT CT CT CC CT
13003267 GT * 12 22/24 GT GT GT GT GT GT GT GT AT GT TT GT
13017585 TC * 13 24/26 TC TC CC AC TC TC TC TC TC TC TC TC TC
13200639 AT * 10 18/20 AT AT AT AT AT AT AC AT AT AA
13201032 TA * 28 51/56 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TT GC AC TA
13230607 GA * 10 18/20 GA GA GA GA GA GA GA GA AG GA
13246771 TG * 11 20/22 TG TG TG TG TG TG TG TG TG TT TC
13248972 GA * 43 79/86 GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GG GA AG AT CT
13314512 GA * 10 18/20 GA GA GT GA GA AA GA GA GA GA
13330700 CA * 68 123/136 CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA TG CA CA AA AA CC GA AG AC AT TA
13386804 CA * 18 33/36 CA CT CT CA CA CA CA CA CA CA CA CA CA CA CA CA CA AA
13418260 CT * 11 20/22 CT CT CG CT GT CT CT CT CT CT CT
13428483 CT * 12 22/24 CT CT CT CT CT CT CT CT CT CT CA CC
13449231 TC * 10 18/20 TC GC TC TC TC TC TC TT TC TC
13562676 AG * 10 18/20 AG AG AG AG AG AG AG AG GG AA
13593835 AT * 35 64/70 AT GT AT AC AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT GT AC CA
13630975 GT * 12 23/24 GT GT GT GT GT GT GT GT GT GT GT GC
13638116 AC * 12 22/24 AC AC AC AC AC AT AC AC AG AC AC AC
13691095 AT * 10 18/20 AT AT CT TT AT AT AT AT AT AT
13698313 TG * 11 20/22 TG AG GG TG TG TG TG TG TG TG TG
13745766 TA * 10 19/20 TA TA TA TA TA TA TA TA TT TA
13813167 AT * 36 65/72 AT AA TT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AC TA TA AT
13836374 TA * 34 62/68 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA CC TG AT CA
13933821 AT * 12 22/24 AT AT AT AT AT AT AT AT AT AT AC AC
13959477 TA * 11 20/22 TA TA TA TA TA TA TA TA TA TA AT
13959503 AT * 29 53/58 AT AT AA AT AA AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT TG GT
13982258 GT *105 190/210 GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GA TG TG AT CA CC CT GT GA TT GT AG GT GC TC CA
14008267 CT * 10 18/20 CT CT CT CT CT CT CT CT TT TT
14040472 TC * 10 18/20 TC TT TC TC TC TC TC TC TT TC
14087162 CT * 10 18/20 CT CT CT CT CT CT CA GT CT CT
14094944 AC * 21 38/42 AC AC AC AC TC AC AC AC AC TC AC AC AC AC AC AC AC AC AC AC CG
14274603 TA * 11 20/22 TA TA TA TA TA TA TA TA TA TG TT
14274909 AT * 12 23/24 AT AT AT AT AT AT AT AT AT AT AT CT
14307435 AT * 14 26/28 AT AT AT AT AT AT AT AT AT AT AT AT TA AT
14327634 TG * 12 23/24 TG AG TG TG TG TG TG TG TG TG TG TG
14336872 CA * 12 22/24 CA CA CA CA CT CA CA CA CA TA CA CA
14386959 AT * 15 27/30 AT AT AT AT AT AT AT AT AT AT AT AT TT GT TT
14390062 TG * 10 18/20 TG TG TA TG TG TG TG TG TG TT
14441219 TA * 11 20/22 TA TA TA TA TA TA TA TA TA TG TT
14441525 AT * 12 23/24 AT AT AT AT AT AT AT AT AT AT AT CT
14474046 AT * 14 26/28 AT AT AT AT AT AT AT AT AT AT AT AT TA AT
14494239 TG * 12 23/24 TG AG TG TG TG TG TG TG TG TG TG TG
14503475 CA * 12 22/24 CA CA CA CA CT CA CA CA CA TA CA CA
14553554 AT * 15 27/30 AT AT AT AT AT AT AT AT AT AT AT AT TT GT TT
14556657 TG * 10 18/20 TG TG TA TG TG TG TG TG TG TT
14565434 CT * 11 21/22 CT CT CT CT CT CT CT CT CT CT CG
14570701 AG * 11 20/22 AG AG AG AG AG AG AG AG AG GT AG
14636062 CA * 13 24/26 CA CA CA CA CA CA CA CA CA CA CA CA TC
14673096 CA * 13 24/26 CA CA CA CA CA CA CA CA CA CA CA CA AG
14687656 AT * 12 23/24 AT AT AT AT AT AT AT GT AT AT AT AT
14688502 AT * 10 18/20 AT AT AT AT AT AT AT AT AT TC
14706800 TA * 41 74/82 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA AC AT TT TC CT
14707334 CT * 11 20/22 CT CT CT CT CT CG CT CT AT CT CT
14719196 CA * 11 21/22 CA AA CA CA CA CA CA CA CA CA CA
14775218 AT * 31 56/62 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT GA TT TT TG
14813516 AT * 17 31/34 AT TT AT AG AT AT AT AT AT AT AT AT AT AT AT GT AT
14817963 TG * 10 18/20 TG TG TG TG TG TG TG TG TG GT
14818008 TG * 10 18/20 TG TG TC TG TG TC TG TG TG TG
14842087 AC * 16 30/32 AC AC AC AC AC AC AC AC AC AC AT AC AC AC AC AT
14893832 TG * 17 31/34 TG TG CG TG TG TG TG TG TG TG TG TG TG TG TG TA TT
14901992 AT * 24 44/48 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT TT AC AA TT
14913483 AC * 10 18/20 AC TA AC AC AC AC AC AC AC AC
14953870 AC * 18 33/36 AC AC AT AC AC AC AC AC AC AC AC AC AC AC AA AC AC AA
15022902 AT * 11 20/22 AT GT AC AT AT AT AT AT AT AT AT
15083323 AC * 13 24/26 AC AC AC GC AC AC AC AC AC AC AC AC AA
15106407 CT * 13 24/26 CT CT CT CT CT CT CT CT CT TT CC CT CT
15126804 TC * 16 29/32 TC TG TC TG TC TC TC TC TC TC TC TC TC TC TG TC
15167491 AG * 16 29/32 AG AG AG AG AG GG AG AG AG GG AG AG AG AG AG AC
15180685 AT * 22 40/44 AT AT AT AT AT AT AT AT AT AT AT AC AT TT AT AT AT TT AT AT AT AA
15213393 AT * 11 20/22 AT AT AT AT AT AT AT AT AT AA TT
15247108 TA * 11 21/22 TA TA TA TA TA TA TA TA TA TA TT
15247130 AT * 10 19/20 AT AT GT AT AT AT AT AT AT AT
15247170 GA * 12 22/24 GA GT GA GA GT GA GA GA GA GA GA GA
15252214 CA * 12 22/24 CA TA CA CA CA CA CG CA CA CA CA CA
15253554 CA * 31 57/62 CA CA CA CT CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA AA TA CA AC
15254240 AT * 13 24/26 AT AT AT AT AT AT AT AT GG AT AT AT AT
15255009 CT * 13 25/26 CT CT CT CA CT CT CT CT CT CT CT CT CT
15257537 TC * 41 74/82 TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TT TT TC CC CG TA GA
15345823 CT * 13 24/26 CT CT CC CT CT CT CT CT CT AT CT CT CT
15351477 TC * 66 120/132 TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TT AT GG AC AA TC TC AT GA
15475952 AT * 11 20/22 AT GT GT AT AT AT AT AT AT AT AT
15485209 CT * 10 19/20 CT CT CT CT CT CT CT CT CT CG
15505739 AT * 15 27/30 AT AT AT AT AT AC AT AT AT AT AT AT AT AT TC
15508472 CA * 13 24/26 CA CA CA CT CA CA CA CA CA CA TA CA CA
15511917 TC * 10 18/20 TC TC TC TC CC TC TC TC TA TC
15598869 CA * 26 48/52 CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA AT TT
15614988 TC * 10 18/20 TC TC TG TC TC TC TC TC TA TC
15622479 GT * 32 58/64 GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT AT GT AC GT GT CT CG
15637402 CA * 64 116/128 CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA GC GG CG CG CG GC GT CG
15647768 GC * 10 18/20 GC GC TC GC GC GC GC GC GA GC
15650767 AC * 13 24/26 AC GC AC AC AC AC AC AC AC AC AC GC AC
15663091 TC * 11 20/22 TC TC TC TC TC TC TC TT TT TC TC
15669445 TA * 10 18/20 TA AA TA TA TA TG TA TA TA TA
15700343 CA * 15 27/30 CA CA CA CA CA CA CA CA CA CA CA CA CT CG CC
15704668 TA * 36 66/72 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TT TA CA TA TG AA AA CA
15771496 CT * 12 22/24 CT CT CT CT CT CT CT CT CT CT AT TT
15771979 TA * 10 18/20 TA TA TA TA TA TA TA TA AA TG
15804853 AT * 18 33/36 AT AT AT AT AT AT AT AT AT AT AT AT AT AT GT AT AT GG
15872804 CA * 10 18/20 CA CA CA CA CA TA CA CA GA CA
15898461 AT * 11 20/22 AT AT AT AT AT AT AT AT GT AT AG
15913671 GT * 13 25/26 GT GT GT GT GT GT GT GT GT GT GT GT GG
15929581 CA * 12 22/24 CA CA CA CA CA CA CA CA CA CA CA TT
15971565 CA * 25 46/50 CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA TA CA TA CA CA CA GG
15987283 TC * 10 18/20 TC TC TC GC TC TC AC TC TC TC
16009750 CT * 10 18/20 CT CT CT CT CT CC CT CT CT TT
16017356 GT * 12 22/24 GT GT GT GT GT GT GT GT GT GT CT AT
16017424 CA * 15 27/30 CA CA CA CA TA CA CA CA CA CA CA CA CA CC CG
16020856 TG * 10 18/20 TG TG TG TG TG TG TG TG TG AT
16021080 TG * 10 18/20 TG TG TG TG TG TA TG TG TG CG
16021183 GA * 12 22/24 GA GA GA GA GA GA GA GA CA TA GA GA
16023650 GT * 11 20/22 GT GT GT GT GT GA GT GT GT GT GA
16030374 TG * 10 19/20 TG TG CG TG TG TG TG TG TG TG
16051074 TG * 10 19/20 TG TG AG TG TG TG TG TG TG TG
16093184 TA * 25 46/50 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TG TA TA TA AT TT
16106581 AT * 10 18/20 AT AT AT AT AT AT AT AT AA TT
16120644 AT * 15 28/30 AT CT AA AT AT AT AT AT AT AT AT AT AT AT AT
16128649 TA * 11 20/22 TA GA TA TA TA TA TA TA TA TA CA
16191169 TC * 10 18/20 TC TT TC TC TC TC TA TC TC TC
16193211 AG * 12 22/24 AG AA AG AG GG AG AG AG AG AG AG AG
16212657 TC * 20 37/40 TC TC TT TT TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TA
16234845 TA * 11 20/22 TA AG TA TA TA TA TA TA TA TA TA
16239250 AC * 12 22/24 AC AC AT AC AC AC AC AC AC AC AC AT
16268444 GA * 10 18/20 GA AA GA AA GA GA GA GA GA GA
16279758 TC * 10 18/20 TC TC TC CG TC TC TC TC TC TC
16281770 TA * 11 20/22 TA TA TA TA TA TA TT TG TA TA TA
16282463 AG * 14 26/28 AG AG AT AA AG AG AG AG AG AG AG AG AG AG
16285250 GT * 15 27/30 GT GT GT GT GT GT GT GT GT GT GT GT GG AT GA
16293772 CT * 10 18/20 CT CT AT CT CT CT CT CT CC CT
16302846 CA * 11 20/22 CA CT CT CA CA CA CA CA CA CA CA
16321309 TA * 10 19/20 TA TA TA TA TA TA TA TT TA TA
16324729 AC * 12 22/24 AC TG AC AC AC AC AC AC AC AC AC AC
16324960 GA * 10 19/20 GA AA GA GA GA GA GA GA GA GA
16410343 AG * 10 18/20 AG AG AG AG AG AG AG GT AG AG
16414426 GA * 12 22/24 GA GA GA GA GA GA GA GA GT GA GG GA
16474405 TA * 11 20/22 TA TA TT TA TA TA TA TA TA TT TA
16474988 GA * 58 105/116 GA GA GA AA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA AG AG AT CC TT
16491339 GT * 12 23/24 GT GT GT GT AT GT GT GT GT GT GT GT
16491574 CA * 11 21/22 CA CA CA CA CA CA CA TA CA CA CA
16495486 GT * 10 18/20 GT GT GT GT GT GT GT CT GT TT
16525620 TG * 12 23/24 TG TA TG TG TG TG TG TG TG TG TG TG
16542117 GA * 13 24/26 GA GA GA GA TA GA GA GA GA GA AA GA GA
16563803 GA * 17 32/34 GA GA GA GT TA GA GA GA GA GA GA GA GA GA GA GA GA
16606023 GT * 16 29/32 GT GA GT GT TT GT GT GT GT GT GT GT GT GT GT GA
16609544 CT * 10 19/20 CT CT CT CT CT CT CT CT CT CA
16611727 TC * 11 20/22 TC TC TT TC TC TC TC TC TC TC TT
16612607 TC * 10 18/20 TC TC AC TC TC TC TC TT TC TC
16612686 TG * 11 20/22 TG TG TG TG TG TG TG TG TA TA TG
16623265 TC * 11 21/22 TC TC TC TC TC TC TC CC TC TC TC
16651418 AC * 21 38/42 AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AT AC TT TC
16664241 TA * 10 18/20 TA TA TA TA TA CA AA TA TA TA
16676132 GT * 14 26/28 GT GT GA GT GT GT GT GT GT GT GT GT GT GG
16692410 AC * 10 19/20 AC AC AC AC AA AC AC AC AC AC
16768728 AG * 10 18/20 AG AG AG AG AT AT AG AG AG AG
16769755 AG * 16 29/32 AG AG AG AG AG AG AT AT AG AG AG AG AG AG AC AG
16778034 TA * 10 18/20 TA TA TA TA TA TA GG TA TA TA
16840566 GT * 11 20/22 GT CT GT GT GT GT AT GT GT GT GT
16840589 TG * 15 27/30 TG TG TG TG TA AG TG TG TG TG TG TG TG TG CG
16844463 GA * 15 27/30 GA GA AA GA GA GA GA GA AA GA GA GA GA GA GC
16846621 CT * 18 33/36 CT TT CT CT CT CT CT CT CT CT CT CT CT TT CT CT AT CT
16851640 AC * 12 22/24 AC AC AA AC AC AC CC AC AC AC AC AC
16870991 AT * 12 23/24 AT AT AT AT AT AT AT AT AT AT AT AA
16942134 AT * 12 22/24 AT AA AT AT AT AC AT AT AT AT AT AT
17042028 AG * 10 18/20 AG AG AG AG AA AG AG AG AG TG
17042291 TC * 10 18/20 TC AC TC TC TC TT TC TC TC TC
17060443 CT * 11 20/22 CT CT CT CT CT CT CT CT CT CT TC
17072956 AT * 11 20/22 AT AT AT AT AT AT AT AT AT AT GG
17082638 TG * 10 18/20 TG TG CG TG TG TT TG TG TG TG
17095380 TC * 10 18/20 TC TC TC TC TC TC TC TC TC AT
17096277 AG * 11 20/22 AG AG AG AG AG AG AG AG AT GG AG
17158367 TA * 16 30/32 TA TA TA TA TA TG CA TA TA TA TA TA TA TA TA TA
17196328 CA * 10 18/20 CA CA CA TT CA CA CA CA CA CA
17410841 AG * 10 18/20 AG AT AG AG AG AG AG AA AG AG
17419694 CT * 12 22/24 CT TT CT CT CT CT CT CT CT CT CT CA
17439811 AT * 33 61/66 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT CC TA AG
17467123 AT * 10 18/20 AT AA AA AT AT AT AT AT AT AT
17485076 AT * 43 78/86 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT GT GT GT GG CT AT AC AA
-----------------------------------------------------------------------------------------
Total sequence length......................... 17624844
Minimum Di-Nucleotide repeat units............ 10
Mismatch allowed ............................. 10%
Total number of repeats detected.............. 518
-----------------------------------------------------------------------------------------
Length distribution of Di-Nucleotide Repeats
No. of Repeat Units AT TA AG GA AC CA TG GT TC CT GC CG
10 to 14 59 32 34 29 35 51 47 31 38 25 1 0
15 to 19 16 9 5 4 3 11 8 4 2 3 0 0
20 to 24 4 1 2 1 4 1 1 0 3 0 0 0
25 to 29 4 4 0 0 1 4 0 0 1 0 0 0
30 to 34 3 2 0 1 0 1 0 1 1 1 0 0
35 to 39 2 1 1 0 0 0 0 0 0 1 0 0
40 to 44 2 3 1 1 0 0 0 0 1 0 0 0
45 to 49 1 0 0 0 0 0 0 0 0 0 0 0
50 and more 0 1 1 1 0 3 1 1 5 3 0 0
-----------------------------------------------------------------------------------------
Total 91 53 44 37 43 71 57 37 51 33 1 0
-----------------------------------------------------------------------------------------
Frequency distribution of different di-nucleotide repeat classes
91 AT + 53 TA = 144
44 AG + 37 GA + 33 CT + 51 TC = 165
37 GT + 57 TG + 71 CA + 43 AC = 208
1 GC + 0 CG = 1
-----------------------------------------------------------------------------------------
Di-Nucleotide repeats in C. elegans Chromosome-X complete sequence
Minimum di-nucleotide repeating units = 10 (allowing a maximum of 10% mismatch)
Total 518 repeats covering 14826 / 16218 base pairs
Length distribution of all di-nucleotide repeats
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
no. of repeat-units 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 >=50
total repeats 151 94 82 45 10 23 18 11 12 1 4 8 2 2 1 5 5 0 2 2 0 3 4 2 1 2 2 0 0 1 0 4 2 2 0 0 1 0 0 0 16
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Length distribution of different di-nucleotide repeat classes
no. of repeat-units 10-14 15-19 20-24 25-29 30-34 35-39 40-44 45-49 >=50
total repeats--> 382 65 17 14 10 5 8 1 16
AT 59 16 4 4 3 2 2 1 0
TA 32 9 1 4 2 1 3 0 1
AG 34 5 2 0 0 1 1 0 1
GA 29 4 1 0 1 0 1 0 1
AC 35 3 4 1 0 0 0 0 0
CA 51 11 1 4 1 0 0 0 3
TG 47 8 1 0 0 0 0 0 1
GT 31 4 0 0 1 0 0 0 1
TC 38 2 3 1 1 0 1 0 5
CT 25 3 0 0 1 1 0 0 3
GC 1 0 0 0 0 0 0 0 0
CG 0 0 0 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------
Sequence-wise distribution of di-nucleotide repeats
Sequence AT TA AG GA AC CA TG GT TC CT GC CG
--------------------------------------------------------------------------------------------------------
lcl|chr_X -( 17624844 bp) 91 53 44 37 43 71 57 37 51 33 1 0
--------------------------------------------------------------------------------------------------------
Total ( 17624844 bp) 91 53 44 37 43 71 57 37 51 33 1 0
--------------------------------------------------------------------------------------------------------
-------------------------------------------------------------------------------
Frequency distribution of different di-nucleotide repeat classes
91 AT + 53 TA = 144
44 AG + 37 GA + 33 CT + 51 TC = 165
37 GT + 57 TG + 71 CA + 43 AC = 208
1 GC + 0 CG = 1
-------------------------------------------------------------------------------
-------------------------------------------------------------------------------
Frequency distribution of di-nucleotides repeated for 20 times or more
--repeats longer than 40 bp
16 AT + 12 TA = 28
5 AG + 4 GA + 5 CT + 11 TC = 25
2 GT + 2 TG + 9 CA + 5 AC = 18
0 GC + 0 CG = 0
-------------------------------------------------------------------------------
Total repeats >= 40 bp = 71
-------------------------------------------------------------------------------
© Division of Biochemical Sciences, National Chemical Laboratory, Pune 411008, INDIA