Mono-Nucleotide Repeats in Genomic Sequences
Mono-Nucleotide Repeats in
C. elegans Chromosome-X complete sequence
Genomic Sequence:
lcl|chr_X
Position Repeat-length Repeat
80964 19/21 TTTTTTTGTTTTTTGTTTTTT
102670 18/20 TTTTTTTTTTGTTTTTTTGT
165165 33/36 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGT
202270 18/20 TTTTTTTTTTGTTTTTTATT
231703 18/20 TTTTTTTTTTTGGTTTTTTT
308129 21/23 AAAAAAAAAAACAAAAAAAAAAC
315722 22/24 TTTTTTTTTCTTTTTTTTTATTTT
323210 18/20 AAAAAAAAATAAAACAAAAA
356210 22/24 CCCCCCCCCCCCCCCCCCCCCACA
382890 18/20 GGGGGGAGGGGGGGGGGGGT
383937 23/25 TTTTTTGTTTTTTTTTTTTTATTTT
416572 21/23 GGGGGGGGGGGGGGGGGGTGGGT
438059 19/21 AAAAAAAAAGAAAAATAAAAA
455630 19/21 AAAAAAAAAAAAAAAAAATCA
494899 20/22 CCCCCCCCCCCCCCCCCCCCAT
534041 19/21 CCCCCCCCCCCCCCCCCACTC
667470 18/20 TTTTTTTTTTCTTTTTTCTT
667656 18/20 TTTTTTTCTTTTTTTTTTTA
692078 19/21 TTTTTTTAATTTTTTTTTTTT
723507 18/20 TTTTTGTTTTTTTTCTTTTT
727797 23/25 GGGGGGGGGGGGGGGGGGGGGATGG
730490 21/23 AAAAAACAAAAAAAAACAAAAAA
756285 19/21 CCCCCCCCCCCCCCCCACCAC
810740 18/20 GGGGGGGGGGGGGGGGGTGA
813726 18/20 AAAAAATACAAAAAAAAAAA
820752 21/23 TTTTTTTTTTGTTTTTTTTTTTG
824485 18/20 CCCCCCCCCCCCCCCCCCTT
829215 22/24 CCCCCCCCCCCCCCCCCCCCTCCT
845334 18/20 TTTTTTTTTACTTTTTTTTT
901506 20/22 CCCCCCCCCCCCCTCCTCCCCC
949703 18/20 GGGGGGGGGGGGGGGGGAGT
960334 23/25 CCCCCCCCCCCCCCCCCCCCTCCTC
961033 21/23 TTTTTTATTTTTTTGTTTTTTTT
986131 18/20 AAAAAAAAAGTAAAAAAAAA
998241 19/21 AAAAACCAAAAAAAAAAAAAA
1010272 18/20 TTTTTTTTTGTTTTTTTTTC
1024547 22/24 AAAAAAAAAAAAGAAAAAAAAAGA
1042684 19/21 TTTTTTTTGCTTTTTTTTTTT
1054452 19/21 TTTTTTTTTCTTTTTTTTTGT
1068086 20/22 CCCCCCCCCCCCCCCCCCAACC
1076449 19/21 CCCCCCCCCCCCCCCCCCATC
1114205 20/22 TTTTTTGTTTATTTTTTTTTTT
1119378 18/20 AAAAAAAAACGAAAAAAAAA
1121520 18/20 TTTTTTTTCTGTTTTTTTTT
1121921 18/20 TTTTTTTTTGTTTTTTTTTC
1136210 18/20 AAAAACCAAAAAAAAAAAAA
1157733 20/22 CCCCCCACCCCCCCCCCCCCCA
1183964 18/20 AAAAAAAAAAAGAAAAACAA
1186934 19/21 GGGGGGGGGGGGGGGGGGGTC
1227903 19/21 AAAAAAAAAAACAAAACAAAA
1244834 19/21 AAAAAAAAAAAAAGAAACAAA
1258824 18/20 CCCCCCCCCCCCCCCCCTTC
1261604 23/25 AAAAAAAAAAACCAAAAAAAAAAAA
1267925 18/20 GGGGGGAAGGGGGGGGGGGG
1268358 18/20 AAAAAAAAAAAAGTAAAAAA
1276945 18/20 TTTTTTTTCTTTTTTTTTTA
1323246 19/21 AAAAATTAAAAAAAAAAAAAA
1330021 18/20 GGGGGGGGGGGGAAGGGGGG
1334556 19/21 TTTTTATTTTTTTATTTTTTT
1346910 19/21 TTTTTTATTTTTATTTTTTTT
1379929 35/38 TTTTTTTTTTGTTTTTTTTTTGTTTTTTTTTGTTTTTT
1386301 18/20 AAAAAAAAAAGGAAAAAAAA
1388839 24/26 AAAAAAAACCAAAAAAAAAAAAAAAA
1393073 23/25 AAAAAAAAAAACCAAAAAAAAAAAA
1401331 20/22 GGGGGGGGGGGGGGGGGGGGTC
1415162 18/20 TTTTTTTTTTTGTTTGTTTT
1417205 28/31 AAAAAAACCAAAAAAAAAAAAAAAAAAAAAT
1427364 19/21 TTTTTTTTTTCTTTTTTTTTC
1446890 19/21 TTTTTTTTTGGTTTTTTTTTT
1460747 18/20 TTTTTTTTTTTTTTGTTTCT
1466375 18/20 TTTTTTTTTTTTTGATTTTT
1473056 19/21 TTTTTTTTCTTCTTTTTTTTT
1566975 21/23 CCCCCCCCCCCCCCCCCCCCCGA
1576784 20/22 CCCCCCCCCCCCCCCCCCCTTC
1717349 19/21 CCCCCCCCCCCCCCCCACCAC
1757586 18/20 AAAAAAAAACAAAACAAAAA
1816940 19/21 AAAAAAAAACAAAAAAACAAA
1839349 18/20 AAAAAAAAATAAAAACAAAA
1891291 19/21 GGGGGAGGGGGGGGGGGGGGC
1894118 18/20 AAAAATAAAAAAAATAAAAA
1925084 22/24 CCCCCCCCCCCCCCCCCCCCTCCT
1941480 21/23 TTTTTTTTGGTTTTTTTTTTTTT
1950928 18/20 CCCCCCCCCCCCCCCCTCTC
1952669 22/24 GGGGGGGGGGGGGGGGGGGGCGCG
2000220 18/20 AAAAAAAAAGAAAAAAAAAG
2041653 24/26 CCCCCCCCCCCCCCCCCCCCCCCCAA
2069672 24/26 CCCCCCCCCCCCCCCCCCCCCCGCCT
2071626 18/20 TTTTTTTTTTTTTTTTAATT
2084888 24/26 CCCCCCCCCCCCCCCCCCCCCCACAC
2165296 20/22 AAAAAAAAAAAAACAAAAATAA
2185826 18/20 CCCCCCCCCCCCCCCCCCGA
2196250 19/21 GGGGGGGGGGGGGGGAGGAGG
2220898 19/21 CCCCCCTCCCCCCCCCCCCAC
2234716 19/21 TTTTTTTTTTTTTTTTTTGAT
2242198 21/23 AAAAAAAAATAAAAAATAAAAAA
2256350 30/33 CCCCCCCCCCCCCCCCCCCCCCCCCCGCCACAC
2263737 20/22 GGGGGGGGGGGGGGGGGGGGTT
2296438 18/20 CCCCCCCCCCCCTCCCCCCA
2303022 18/20 AAAAAAAAACAAGAAAAAAA
2322317 18/20 GGGGGGGGGGGGGGGGGCAG
2323128 18/20 AAAAAAAAAATAAAAGAAAA
2325895 19/21 TTTTTTTTTCTTTTTTTTCTT
2327670 18/20 TTTTTTTGTTGTTTTTTTTT
2336208 18/20 TTTTTTTTCTTTTTTTTTCT
2339934 19/21 AAAAAAAAAAAAAAAAAGAAG
2385101 19/21 AAAAAAAATCAAAAAAAAAAA
2388187 18/20 AAAAATAAAACAAAAAAAAA
2401423 19/21 AAAAAAAAAAACAAAAAAAAG
2401889 18/20 AAAAATCAAAAAAAAAAAAA
2402923 22/24 AAAAAAAATAAAAAAATAAAAAAA
2405897 19/21 AAAAAAAAAAAAAAAACATAA
2410892 19/21 TTTTTTTTTATTTTGTTTTTT
2430218 20/22 TTTTTTTTTGATTTTTTTTTTT
2465730 19/21 CCCCCCCCCCCCCCCCCCTCA
2470419 20/22 GGGGGGGGGGGGGGGGGGGGAT
2480915 19/21 AAAAAAAAAAAAAAACAATAA
2493009 21/23 AAAAAAAAAAAAAAAAAAAAAGG
2567851 18/20 AAAAAAAAAACAAAAAAAAT
2604454 19/21 TTTTTTTTTCTTATTTTTTTT
2646503 20/22 CCCCCCCCCCCCCCCCCTTCCC
2668050 19/21 TTTTTTTTGGTTTTTTTTTTT
2670433 19/21 AAAAATCAAAAAAAAAAAAAA
2714037 18/20 AAAAAAAAAAAAACATAAAA
2714632 19/21 TTTTTTCTTTTTTCTTTTTTT
2724087 20/22 AAAAAAAAAAAAAAAAAAAATT
2762856 21/23 TTTTTTTTTTCTTTTTTTTTCTT
2799949 22/24 AAAAAAAAAGAAAAAAAAAAGAAA
2819981 20/22 TTTTTTTTTTTTTTTAATTTTT
2833588 19/21 TTTTTTGTTTTTTTTTTGTTT
2846942 18/20 GGGGGGGGGGGGGGGGGGCC
2854105 18/20 TTTTTTTTCTTTTTTTTTCT
2855248 21/23 CCCCCCCCCCCCCCCCCCCAACC
2882730 18/20 GGGGGGGGGGGGGGGGGGTC
2899907 20/22 CCCCCCCCCCCCCCCCCCCTCT
2905392 18/20 AAAAAAAAAAGAAAGAAAAA
3002489 18/20 AAAAAAAAAGAAAAAAAAAC
3037056 18/20 TTTTTTGTTTTTTTTTTTTG
3058571 21/23 AAAAAAAAAACAAAAAAAAACAA
3094635 22/24 TTTTTTTTTGTTTTTGTTTTTTTT
3108707 19/21 CCCCCCCCCCCCCCCCCCACT
3138487 18/20 AAAAAAACAACAAAAAAAAA
3182847 19/21 AAAAAAAAAAAATAAAAACAA
3218740 18/20 AAAAAAAAATAAAGAAAAAA
3231435 27/30 AAAAAAAAAAAAAAAAAAAAAAAAAAAGTT
3245531 20/22 AAAAAAAAACCAAAAAAAAAAA
3246862 19/21 TTTTTTTTTCGTTTTTTTTTT
3272777 18/20 GGGGGGGGGGGGGGGGGGCC
3336722 20/22 CCCCCCCCCCCCCCCCCCCCGA
3354529 18/20 AAAAAAAAAACAGAAAAAAA
3397457 21/23 AAAAAAGAAAAAAAAAAAGAAAA
3450218 18/20 TTTTTTGTTTTGTTTTTTTT
3524618 18/20 TTTTTTTTTGTTTTTTTTTC
3536790 19/21 TTTTTTTTTGTTTTTTTTCTT
3573753 19/21 AAAAAACAAAAAAACAAAAAA
3575094 18/20 GGGGGGGGGGGGGGGGGAGA
3578067 18/20 GGGGGGGGGGGGGGGGGGTA
3618892 20/22 TTTTTTGTTTGTTTTTTTTTTT
3627621 19/21 TTTTTTTTTTATTTTTTATTT
3653164 18/20 CCCCCCCCCCCCCCCCCGAC
3654529 19/21 CCCCCCCCCCCCCCCTCCCTC
3701175 19/21 AAAAAAAAAAAAGAAAACAAA
3726358 19/21 GGGGGGGGGGGGGGGGGGGTT
3733794 18/20 AAAAAAAAAGAAAAAGAAAA
3741425 19/21 CCCCCCCCCCCCCCCCCCGCT
3833464 18/20 TTTTTTGTTGTTTTTTTTTT
3869347 18/20 TTTTTTTTTCTTTTTTTTTC
3895372 18/20 TTTTTTTTCTTTTTTTTTCT
3899682 22/24 CCCCCCCCCCCCCCCCCCCCGCCT
3899939 19/21 TTTTTTTTTCTTTTTTTCTTT
3937818 18/20 AAAAAAAAAAAATAGAAAAA
3971704 19/21 GGGGGGGGGGGGGGGGGTGGA
3977071 19/21 GGGGGGGGGGGGGGGGGAGGA
3987485 26/28 TTTTTTTTTTTTTTTTTTTTTGGTTTTT
4059770 20/22 TTTTTTATTTGTTTTTTTTTTT
4077818 18/20 AAAAAAAAACAAGAAAAAAA
4079711 18/20 CCCCCCCCCCCCCCCCTCCA
4084318 18/20 TTTTTTTCTTGTTTTTTTTT
4106043 18/20 TTTTTTTTGTTTTTTTTTTC
4123979 18/20 AAAAAAAAACAAAAGAAAAA
4124856 18/20 AAAAAAAAAACAAATAAAAA
4136052 22/24 GGGGGGGGGGGGGGGGGGGGAGCG
4150382 18/20 CCCCCCCCCCCCCCCCCCTT
4163661 20/22 TTTTTTGTTTTTTTTTGTTTTT
4164417 19/21 TTTTTTTTTTTGTTTTTTTTC
4189677 19/21 GGGGGGGGGGGGGGGGGGGTT
4266348 23/25 CCCCCCCCCCCCCCCCCCCCCCACA
4331686 24/26 AAAAACGAAAAAAAAAAAAAAAAAAA
4405837 19/21 AAAAAAAAAACAAAAACAAAA
4416427 20/22 TTTTTTTTTTTTTTTTTTTTCA
4424485 19/21 TTTTTTTTTCGTTTTTTTTTT
4644507 19/21 TTTTTTTTATTTTTTTTTCTT
4649959 18/20 CCCCCCCCCCCCCCCCCCGT
4652254 20/22 CCCCCCCCCCCCCCCCCCCTCT
4711789 19/21 GGGGGGGGGGGGGGGGGGAAG
4728780 18/20 GGGGGGGGGGGGGGGGCGTG
4756522 18/20 AAAAAAAAAAACAAAAATAA
4821650 19/21 GGGGGGGGGGGGGGGGGGGCT
4822564 19/21 TTTTTTTCTTTTTTTTTTGTT
4826708 19/21 TTTTTTTTTTTTTTTCTTTGT
4827130 21/23 TTTTTTATTTTTTTTATTTTTTT
4892751 23/25 CCCCCACCCCCCCCCCCCCCCCCTC
4925306 20/22 AAAAAAAAAAGAAAAGAAAAAA
5034485 18/20 AAAAACAAAAAAAAACAAAA
5034896 18/20 TTTTTTTCTTTATTTTTTTT
5060613 18/20 AAAAAAAAAGAGAAAAAAAA
5088209 18/20 AAAAAATTAAAAAAAAAAAA
5296090 18/20 TTTTTTTTTCTTTTTTTTCT
5329722 19/21 TTTTTTTTTTGGTTTTTTTTT
5352308 18/20 TTTTTTTCTTTGTTTTTTTT
5360310 21/23 AAAAAAAGAAAAAAAAAGAAAAA
5371671 22/24 AAAAAAAAAAAAAAAAATTAAAAA
5375727 20/22 AAAAAAAAAAGAAAAACAAAAA
5383377 36/40 AAAAAAAAAAAAAGAAAAAAAAAAAAGAAAAAAAAAGAAT
5422062 20/22 AAAAAAAAACAAAAAAAAATAA
5567993 19/21 TTTTTTTTTGTTTTTTTTTTC
5609012 27/30 GGGGGGGGGGGGGGGGGGGGGGGGGGCTGT
5664114 18/20 TTTTTTTTTTTTTCATTTTT
5729393 19/21 GGGGGGGGGGGGGGGGGGGTA
5768576 18/20 TTTTTCTTTTTTTTTTTCTT
5786187 21/23 GGGGGGGGGGGGGGGGGGAGGTG
5815089 20/22 CCCCCCCCCCCCCTCCCCCCCT
5899623 18/20 GGGGGGGGGGGGCGGGGGGT
5952661 21/23 TTTTTTGTTTTTTTTTGTTTTTT
5978075 19/21 AAAAAAAAAAAAAACAAAAAG
6024510 18/20 TTTTTATTGTTTTTTTTTTT
6041163 18/20 AAAAAAAAAACAAAAAAAAT
6144772 22/24 AAAAAAAATTAAAAAAAAAAAAAA
6163985 20/22 TTTTTTTTTTGTATTTTTTTTT
6172253 18/20 AAAAAAATCAAAAAAAAAAA
6210701 18/20 TTTTTTTCTTTTTTTTTTCT
6219849 20/22 AAAAAAAAAAAAAAACAAAAGA
6234503 19/21 AAAAAAAAAACAAAATAAAAA
6236436 18/20 TTTTTCTATTTTTTTTTTTT
6244603 22/24 CCCCCCCCCCCCCCCCACCCCCAC
6440372 18/20 TTTTTTTTTCTTTGTTTTTT
6445312 18/20 TTTTTTTTTTTTACTTTTTT
6473173 22/24 AAAAAAAAAAACAACAAAAAAAAA
6482534 20/22 GGGGGGGGGGGGGGGGGGGGTC
6484226 21/23 TTTTTTTTTTTTTTTAATTTTTT
6547223 22/24 TTTTTTTTTTTTTTCATTTTTTTT
6565170 19/21 AAAAAAAAAAAGGAAAAAAAA
6582599 18/20 TTTTTTATTTTTTTATTTTT
6619721 21/23 GGGGGGGGGGGGGGGGAGCGGGG
6655201 18/20 GGGGGGGGGGGGGGGAGGCG
6775353 18/20 CCCCCCCCCCCCCCCCACCA
6789940 18/20 AAAAAAAAAATAACAAAAAA
6837190 21/23 GGGGGGGGGGGGGGGGGGGGGTC
6867588 18/20 AAAAAAAAAAAAACAAAAAT
7001208 20/22 TTTTTTTTTTTTAATTTTTTTT
7012040 20/22 TTTTTGTTTTTTTTTCTTTTTT
7028260 25/27 GGGGGGGGGGGGGGGGGGGGAGGGGGT
7070545 18/20 AAAAAAAAAACAACAAAAAA
7270287 18/20 TTTTTTCTTTGTTTTTTTTT
7276018 20/22 GGGGGGGGGGGGGGGGGTGGCG
7295107 20/22 TTTTTTTTTGTTTTTTTTGTTT
7417911 20/22 TTTTTTTTGTTTTTTTTTTGTT
7453940 19/21 TTTTTTTTTCTTTTTTTTTTA
7466162 41/45 AAAAAATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGAA
7475212 23/25 TTTTTTTTTTGTTTTTTTTTTGTTT
7519768 19/21 AAAAAATCAAAAAAAAAAAAA
7529805 18/20 AAAAAAAAGAAAAAATAAAA
7533669 19/21 TTTTTTATTTTTTTATTTTTT
7557427 21/23 TTTTTTACTTTTTTTTTTTTTTT
7561871 18/20 TTTTTATTTTTTTTTTTATT
7563121 22/24 CCCCCCCCCCCCCCCCCCCCCCGA
7616769 18/20 AAAAAAGACAAAAAAAAAAA
7641388 25/27 AAAAAAAAAAACTAAAAAAAAAAAAAA
7641496 19/21 CCCCCCCCCCCCCCCCCCCAA
7651267 18/20 TTTTTTTTTTTTTTTCTTCT
7687774 18/20 AAAAAAATAAAAAACAAAAA
7735406 20/22 AAAAAAAAAAAGAAAAAAAAAC
7744544 18/20 AAAAAAAAAAAGAAAAAAAC
7746999 19/21 CCCCCCCCCCCCCCCCCCCGA
7756406 19/21 TTTTTGTTTGTTTTTTTTTTT
7761031 18/20 TTTTTTTGTTTTTTCTTTTT
7790198 18/20 CCCCCCCCCCCCCCCCCCAA
7937475 18/20 TTTTTTTTCTTTTTTTTTGT
7938885 19/21 AAAAAAAAAAAAGAAAAAAAT
7955485 23/25 GGGGGGGGGGGGGGGGGGGGGGGCA
7999197 18/20 GGGGGTGGGGGAGGGGGGGG
8013515 20/22 TTTTTTTTTCTTTCTTTTTTTT
8149523 18/20 AAAAAAAAATAAACAAAAAA
8260255 21/23 GGGGGGGGAGGGGGGGGGGGGTG
8265722 22/24 CCCCCCCCCCCCCCCCCCCCGCCA
8291242 20/22 GGGGGGGGGGGGGGGGGCGGAG
8316367 18/20 AAAAAAAAAAAAAAACTAAA
8363805 18/20 AAAAAAAAAAAACAACAAAA
8376747 20/22 CCCCCCCCCCCCCCCCCCCCAA
8518104 21/23 GGGGGGGGGGGGGAGGGGGGGGT
8541608 19/21 TTTTTTTTTTTTTTTTTAATT
8572224 19/21 TTTTTTTTTTTTTTTTTCTTA
8593007 20/22 TTTTTTTTTTTTTAGTTTTTTT
8772451 18/20 AAAAAAAAAAAAAAGACAAA
8822204 18/20 TTTTTTTTTTTTTTTTTGTA
8849534 18/20 AAAAAAAAAAAAAAAAGCAA
8864272 21/23 AAAAAAAAAGAAAAAAAAGAAAA
8916356 19/21 TTTTTTTGTTTTTTTTTGTTT
8921619 20/22 GGGGGGGGGGGGGGGGGGTTGG
9050517 21/23 CCCCCCCCCCCCCCCCGCCCCCA
9109034 20/22 AAAAAAAGAAAAGAAAAAAAAA
9136774 22/24 AAAAAAAAAGAAAAAAAAGAAAAA
9163502 19/21 AAAAAAATAAAAACAAAAAAA
9243236 19/21 CCCCCCCCCCCCCCCCCCCGA
9531578 18/20 AAAAATAAAAAGAAAAAAAA
9536643 18/20 TTTTTTGGTTTTTTTTTTTT
9556029 18/20 TTTTTTTTGTTATTTTTTTT
9739224 18/20 TTTTTTTGTTTTTTTTTGTT
9771797 19/21 TTTTTTTCTTATTTTTTTTTT
9774449 18/20 GGGGGGGGGGGGGGGGGGTC
9877290 21/23 AAAAAAACAAAAAAAAAACAAAA
9880378 20/22 AAAAAAAAGAAAAAAAGAAAAA
9882095 19/21 GGGGGGGGGGGGGGGGGTCGG
9891264 22/24 GGGGGGGGGGGGGGGGGGAGGGGT
10094580 19/21 TTTTTTTTCTTTTTTGTTTTT
10119863 19/21 TTTTTGTTTTTTTGTTTTTTT
10223837 23/25 TTTTTTTTTTTTTTTTTTTTTTCTA
10342567 19/21 CCCCCCCCCCCCCCCCCACCG
10389013 18/20 TTTTTTTTTTTGTTTGTTTT
10448741 20/22 AAAAAAAAAAAAACACAAAAAA
10490791 18/20 AAAAAAAAAGGAAAAAAAAA
10553248 19/21 AAAAAAAAAGAAAAAAAAAGA
10586635 22/24 GGGGGGGGGGGGGGGGGAGGCGGG
10752307 19/21 AAAAAAAGAAAAAAAAACAAA
10776121 28/31 GGGGGGGGGGGGGGGGGGGGGGGGGGGGCTT
10835224 18/20 AAAAAAGAAAAGAAAAAAAA
10835886 22/24 AAAAAAAGAAAAAAAACAAAAAAA
10868223 18/20 GGGGGGGGGGGGGGGGGGCA
11002091 29/32 TTTTTTTTTTTTTTTTTTTTTTTTTAGTTTTA
11022226 18/20 AAAAAAAAAAAATAAATAAA
11056138 21/23 GGGGGGGGGGGGGGGGGGGGCGC
11181058 18/20 AAAAAAAAACAACAAAAAAA
11337656 18/20 AAAAAAAAAATAAAAAAGAA
11368783 18/20 AAAAATTAAAAAAAAAAAAA
11383710 18/20 CCCCCCCCCCCCCCCAACCC
11393440 18/20 AAAAAAAACAACAAAAAAAA
11489031 20/22 TTTTTTTTTTCGTTTTTTTTTT
11496138 18/20 TTTTTTTTGTTTTTTTTTCT
11514983 20/22 TTTTTTTTTTCGTTTTTTTTTT
11522090 18/20 TTTTTTTTGTTTTTTTTTCT
11575557 19/21 AAAAAAAATTAAAAAAAAAAA
11588183 18/20 TTTTTTTTGTTTTTTTTTTG
11700490 19/21 TTTTTTTGTTTTTTGTTTTTT
11827947 20/22 CCCCCCCCCCCCCCCCCCCGGC
12005568 21/23 CCCCCCCCCCCCCCCCCCCGTCC
12105107 23/25 TTTTTCTTTTTTTTTTTTTGTTTTT
12126483 18/20 CCCCCCCCCCCCCCCCCACA
12132809 21/23 GGGGGGGGGGGGGGGGGGGGGTA
12254263 18/20 GGGGGGGGGGGGGGGGGCAG
12313826 20/22 CCCCCCCCCCCCCCCCCCCACT
12464381 18/20 TTTTTTTTTTGCTTTTTTTT
12535532 19/21 CCCCCCCCCCCCCCCCCCATC
12566834 18/20 AAAAAAAAAGAAAAAATAAA
12644389 19/21 TTTTTTTTTTTTTAATTTTTT
12651453 18/20 TTTTTTTTTGTTTTTTTTTG
12661332 18/20 CCCCCCCCCCCCCCCCTCTC
12699784 19/21 CCCCCCCCCCCCCCCCGCCCA
12814570 18/20 TTTTTTTTGTTTCTTTTTTT
12955286 24/26 CCCCCACCCCCCCCCCCCCCCCCTCC
12955593 19/21 TTTTTTTTCTTTTTTTTTTTG
12988130 23/25 AAAAAAAAAAAAAAAAAAATAATAA
12988156 23/25 AAAAAAAAAAAAAAAAAAAAAAATT
13011738 19/21 CCCCCCCCCCCCCCCCCATCC
13027311 18/20 AAAAAAAAAAAACAAAAATA
13044905 22/24 AAAAAAAAAAAATTAAAAAAAAAA
13070742 22/24 TTTTTTTTTTTTTTTTTTAATTTT
13074848 20/22 GGGGGGGGGGGGGGGGGGGGTT
13137275 39/43 AAAAAACAAAAAAAAAAGAAAAAAAAAAAAGAAAAAAAAAAGA
13186779 22/24 AAAAAACAAAAAAAAACAAAAAAA
13186866 20/22 AAAAAAAAAACCAAAAAAAAAA
13204674 21/23 AAAAAAAAAAAAAAACAAAAAAT
13208106 18/20 TTTTTTTTTGTTTTTTTTTA
13211200 19/21 TTTTTTTTTGTTTTTTTTGTT
13273182 18/20 AAAAAAAAGCAAAAAAAAAA
13333169 18/20 TTTTTTTTGGTTTTTTTTTT
13346470 18/20 TTTTTTTTTTTTTAGTTTTT
13419272 18/20 AAAAAAAAAAAAAAAAAACG
13455344 18/20 TTTTTTTGTTGTTTTTTTTT
13488739 20/22 CCCCCCCCCCCCCCCCCCACCT
13492616 24/26 CCCCCCCCCCCCCCCCCCCCCCACTC
13498832 18/20 TTTTTTGTTTTTTTTTTTTA
13521041 18/20 TTTTTTTTTTTAATTTTTTT
13528418 32/35 CCCCCCCCCCCCCCCCCCCCCCCCCCTCTCCCCTC
13543067 27/30 AAAAAAAAAAATAAAAAAAAAAAAACAAAG
13567727 19/21 AAAAAAAAACAAAAAAAAATA
13587957 18/20 TTTTTTTCTTTTTTTTTTCT
13590232 18/20 AAAAAAAAAAAAACGAAAAA
13670561 18/20 TTTTTTTTTTTTTTTTTTGA
13770093 22/24 AAAAAAAAAAAAGAAAAAAAAAAT
13793758 20/22 CCCCCCCCCCCCCCCCCCCCTT
13801881 23/25 CCCCCCCCCCCCCCCCCCCCCCATC
13835666 21/23 TTTTTTCTTTTTTTCTTTTTTTT
13840878 18/20 AAAAAAAAAAGTAAAAAAAA
13915295 19/21 CCCCCCCCCCCCCCCCCCTCT
13946059 24/26 TTTTTTTTTTTTTTTTTTTTTTTTGA
13982235 18/20 TTTTTTTGTTTTTGTTTTTT
13996373 19/21 AAAAAAAAAACAAAAACAAAA
14048531 21/23 TTTTTTTTTTGTTTTTTTTTGTT
14073711 22/24 GGGGGGGGGGGGAAGGGGGGGGGG
14090805 18/20 CCCCCCCCCCCCCCCCCGTC
14093849 18/20 CCCCCCCCCCCCCCCTCGCC
14112406 20/22 CCCCCCCCCCCCCCCCCCTCCT
14118181 19/21 AAAAAAAAAGAAAAAAACAAA
14121731 21/23 TTTTTTTCTTTTCTTTTTTTTTT
14131543 19/21 TTTTTTTTTTTTTTTTTTTCA
14139551 20/22 AAAAAAAAAAAAGAAAGAAAAA
14154280 20/22 CCCCCCCCCCCCCCCCCCTCCT
14160057 19/21 AAAAAAAAAGAAAAAAACAAA
14172056 19/21 AAAAAAAAAAGGAAAAAAAAA
14172087 19/21 AAAAAAAAAAGGAAAAAAAAA
14206345 20/22 TTTTTTTTTTATTCTTTTTTTT
14207491 24/26 CCCCCCCCCCCCCCCCCCCCCCCGCA
14245435 18/20 AAAAAAAAGACAAAAAAAAA
14280118 20/22 CCCCCCCCCCCCCCCCCCCACG
14285281 18/20 TTTTTTTGTATTTTTTTTTT
14361728 18/20 AAAAAAAAAAACAACAAAAA
14380000 19/21 AAAAAAAAAAAAAAAAGAAGA
14409944 18/20 TTTTTTCTTGTTTTTTTTTT
14412053 18/20 AAAAAAAAGACAAAAAAAAA
14446732 20/22 CCCCCCCCCCCCCCCCCCCACG
14451894 18/20 TTTTTTTGTATTTTTTTTTT
14528327 18/20 AAAAAAAAAAACAACAAAAA
14546596 19/21 AAAAAAAAAAAAAAAAGAAGA
14634995 22/24 CCCCCCCCCCCCCCCCCCCCCACT
14670074 20/22 AAAAAAAAAAAAAAAAAAAGAT
14727302 19/21 CCCCCCTCCCCCCCCCCCTCC
14727495 18/20 GGGGGGGGGGGGGGAGGGTG
14797307 19/21 GGGGGGGGGGGGGGGGGGAAG
14830165 20/22 AAAAAATGAAAAAAAAAAAAAA
14843980 25/27 GGGGGGGGGGGGGGGGGGGGGGGGGCT
14879720 18/20 CCCCCCCCCCCCCCCCCCGA
14881409 18/20 TTTTTTTTTCTTTTTTTTTC
14934605 23/25 CCCCCTCCCCCCCCCCCCCCCCCAC
14949010 18/20 TTTTTATTTTTTATTTTTTT
14998658 18/20 TTTTTTGTTTTTGTTTTTTT
15003334 18/20 GGGGGGGGGGGGGGGGGCAG
15003517 25/27 CCCCCCCCCCCCCCCCCCCCCCTCCCT
15105021 23/25 CCCCCCCCCCCTCCTCCCCCCCCCC
15113762 25/27 AAAAAAAAAGAAAAAAAAGAAAAAAAA
15132409 18/20 TTTTTTTTTTGTTCTTTTTT
15168016 22/24 GGGGGGGGGGGGGGGGGGGAGGGC
15209967 18/20 AAAAAAAAAAAAGAAAAAAT
15256115 18/20 GGGGGGGGGGGGGGGGGTGT
15342509 18/20 TTTTTTTTTGTTTTTTTTTC
15350341 18/20 GGGGGGGGGGGGGGGTGTGG
15363295 18/20 AAAAAAAAAAAAAAAACACA
15415586 19/21 CCCCCCCCCCCCCCCTCCCCT
15425320 18/20 CCCCCCCCCCCCCCCCCCAA
15434208 19/21 TTTTTTTTTCATTTTTTTTTT
15456509 19/21 CCCCCCCCCCCCCTCCCCACC
15481056 29/32 GGGGGGGGGGGGGGGGGGGGGGGGGGGGCAGT
15488282 18/20 TTTTTTTTTCTTTTCTTTTT
15488592 20/22 CCCCCTCCCCCCCCCCCCCACC
15518039 18/20 CCCCCCCCCCCCCCCCCACG
15527277 18/20 AAAAAAAGCAAAAAAAAAAA
15547971 23/25 TTTTTTTTTTTTTTTTTGATTTTTT
15597044 19/21 CCCCCCCCCCCCCCCCTCTCC
15601525 19/21 TTTTTTTTTTTTTGTTTTCTT
15614458 25/27 TTTTTTTTTCTTTTTTTTTTCTTTTTT
15615069 20/22 AAAAACAAAAAAAAACAAAAAA
15631698 18/20 TTTTTCTTTTTTTTTTTTTA
15643485 36/40 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATGG
15644909 20/22 GGGGGGGGGGGGGGGGGGTGAG
15663678 24/26 GGGGGGGGGGGGGGGGGGGGGGAGTG
15728926 19/21 AAAAAAAAAACAACAAAAAAA
15761349 20/22 TTTTTTTCTGTTTTTTTTTTTT
15771412 18/20 GGGGGGGGGGGGGGGGGCCG
15777324 18/20 AAAAAAAAAAAAAAAAAGAT
15806814 18/20 AAAAAAAAACAAAAATAAAA
15812235 26/28 AAAAAAAAAAAAACCAAAAAAAAAAAAA
15868204 19/21 CCCCCCCCCCCCCCCCTCCTC
15873908 18/20 AAAAATAAAAAAAAAAAAAC
15884511 18/20 AAAAAAATAAAATAAAAAAA
15902525 27/30 CCCCCCCCCCCCCCCCCCCCCCCACCCTCA
15934260 18/20 AAAAAAAACAAAAATAAAAA
15967185 26/28 CCCCCCCCCCCCCCCCCCCCCCTCTCCC
16023569 21/23 GGGGGGGGGGGGGGGGGGGGTTG
16028680 26/28 AAAAAAAAAAGAAAAAAAAGAAAAAAAA
16038478 18/20 TTTTTTTTTGTTTTTTTTTA
16056882 21/23 AAAAAAAAAACAAAAAAAAAAGA
16064342 18/20 AAAAAAAATTAAAAAAAAAA
16094415 19/21 TTTTTTTGCTTTTTTTTTTTT
16124058 19/21 GGGGGGGGGGGGAGGTGGGGG
16128487 18/20 CCCCCCCCCCCCCACCACCC
16149150 23/25 TTTTTTTTTTTTTTTTTTTTATTTC
16171342 22/24 TTTTTGTTATTTTTTTTTTTTTTT
16275064 18/20 AAAAAATTAAAAAAAAAAAA
16277233 19/21 TTTTTTTGTTTTTTTTTTCTT
16277970 26/28 GGGGGGGGGGGGGGGGGGGTGGGGGGGT
16278181 18/20 AAAAAAAAAAAAAAGAAACA
16363087 18/20 CCCCCCCCCCCCCCCCGCTC
16431507 18/20 CCCCCCCCCCCCCCCCCGTC
16457316 19/21 TTTTTTTATTTTTTTTTTGTT
16481457 18/20 TTTTTTTCTTTTTTTTTATT
16501739 18/20 AAAAAATAAAAAATAAAAAA
16540114 19/21 CCCCCCCCCCCCCCCCCCTCT
16572600 19/21 CCCCCCCCCCCCCCCCCCCAT
16619133 22/24 AAAAAACAAAAAAAAAAAAAAAAC
16641541 19/21 CCCCCCCCCCCCCCCCCCCAA
16680181 18/20 AAAAAGAAAAAAAAAACAAA
16698576 19/21 AAAAAATGAAAAAAAAAAAAA
16719456 26/28 AAAAAAAAAAAAAAAAAAAAAAAAGATA
16762156 18/20 AAAAAAAAACAACAAAAAAA
16763292 21/23 GGGGGGGGGGGGGGGGGGGAGAG
16782996 20/22 AAAAAACAAAAACAAAAAAAAA
16860253 18/20 CCCCCCCCCCCCCCCCCCTA
16948064 18/20 AAAAAAAAAAAAAAAAAACC
16952295 20/22 GGGGGGAAGGGGGGGGGGGGGG
16962722 19/21 TTTTTATTTTTTTTTATTTTT
17020261 20/22 CCCCCCCCCCCCCCCCCCCTTC
17020632 21/23 CCCCCCCCCCCCCCCCCCCCTTC
17078262 22/24 GGGGGGGGGGGGGGGGGGGGAGGA
17096509 18/20 GGGGGGGGGGGGGGGGGGAT
17110189 22/24 CCCCCCCCCCCCCCCCCCCCCCAA
17124191 18/20 TTTTTTTTTTGGTTTTTTTT
17135015 33/36 AAAAAAAAATGAAAAAAAAAAAAAAAAAAAAAAAAT
17172049 18/20 TTTTTTATTTTTTATTTTTT
17172070 24/26 TTTTTTATTTTATTTTTTTTTTTTTT
17198704 18/20 CCCCCCCCCCCCCCTCCCCG
17206056 18/20 AAAAAAAAAGAAAAAAGAAA
17210006 18/20 GGGGGGGGGGGGGGGGGGTT
17261527 19/21 TTTTTTTCTTTTTTTTTTCTT
17313059 18/20 AAAAAAAAAAAAACAAAAAT
17329775 23/25 GGGGGGGGGGGGGGGGGTGGGGGAG
17393156 22/24 CCCCCCCCCCCCCCCCCCCCCGCT
17396990 31/34 TTTTTTTTTTTTTTTTTTTTTTTTTCATTTTTTC
17402686 19/21 AAAAAAAAAGAAAAAAAAAGA
17419552 20/22 AAAAAAAAAAAAGAAAAAAAGA
17439102 21/23 AAAAAAAAAAAAAGAAAAGAAAA
17478728 19/21 TTTTTTTTTTTTTTTTGATTT
17480589 18/20 AAAAAAAGAAAAAAAAAGAA
17501461 18/20 TTTTTCTTTTTCTTTTTTTT
17516972 19/21 AAAAAAAAAAGAAGAAAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 17624844
Total number of repeats detected.............. 532
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 173 170 72 99
30 to 39 5 3 3 3
40 to 49 3 1 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 181 174 75 102
----------------------------------------------------------------------------
Mono-Nucleotide Repeats in C. elegans Chromosome-X complete sequence
Minimum repeat length = 20 (allowing maximum 10% mismatch)
Total 1 sequences searched with 17624844 base pairs
Total 532 repeats covering 10580 / 11666 base pairs
Length distribution of all Mono-nucleotide repeats
---------------------------------------------------------------------------------------------------------
repeat-length 20-29 30-39 40-49 50-59 60-69 70-79 80-89 90-99 100-and-more
no. of repeats 514 14 4 0 0 0 0 0 0
---------------------------------------------------------------------------------------------------------
Number of repeats
----------------------------------------------------------------------------------------
Sequence A T G C
----------------------------------------------------------------------------------------
lcl|chr_X 17624844 bp 181 174 75 102
----------------------------------------------------------------------------------------
Total 17624844 bp 181 174 75 102
----------------------------------------------------------------------------------------
Repeats >= 40 bp Total> 4 3 1 0 0
----------------------------------------------------------------------------------------
© Division of Biochemical Sciences, National Chemical Laboratory, Pune 411008, INDIA