Mono-Nucleotide Repeats in Genomic DNA Sequences
Mono-Nucleotide Repeats in
C. elegans Chromosome-IV complete sequence
Genomic Sequence:
lcl|chr_IV
Position Repeat-length Repeat
120238 18/20 TTTTTGTTTTTTTTTGTTTT
120813 19/21 AAAAAAAAAAAAGAGAAAAAA
124160 18/20 CCCCCCCCCCCCCTCCCCCT
128210 19/21 TTTTTTTTTTTTTTTTTTTGA
157397 22/24 GGGGGGGGGGGGGGGGGGGGGCAG
163142 19/21 CCCCCCCCCCCCCCCCACCTC
179865 24/26 CCCCCCCCCCCCCCCCCCCCCCTCCT
211921 18/20 AAAAAAAAGAAAGAAAAAAA
259024 19/21 AAAAAAATGAAAAAAAAAAAA
294640 20/22 TTTTTTCTTTGTTTTTTTTTTT
333452 18/20 AAAAAAAAAGAAAAAAAAAG
335928 19/21 TTTTTTTTTTGTTTTTCTTTT
445112 21/23 TTTTTTTTTGATTTTTTTTTTTT
445583 19/21 AAAAAATAAAATAAAAAAAAA
464407 18/20 AAAAAAAAAAAAAACAATAA
465252 23/25 AAAAAAGAAAAAAAAAGAAAAAAAA
475295 18/20 AAAAAAAAGAAAAAAAAAAC
480614 18/20 TTTTTTTATTTTTTTTTTTA
518526 18/20 AAAAAAAAAAAAAAAAACTA
544660 18/20 GGGGGGGGGGGGGGGGGGCA
572768 19/21 TTTTTTTTTTTTTTTTTAATT
594328 18/20 CCCCCCCCCCCCCCCTTCCC
601988 18/20 TTTTTTTTTTCATTTTTTTT
622724 19/21 AAAAAAAAAACAAAAAAACAA
630339 19/21 TTTTTCTTTTTTTTTTTGTTT
631458 18/20 TTTTTTTCTTTTTTTTTGTT
636043 18/20 AAAAAAAAAAACAAAAACAA
639500 19/21 TTTTTTTTTGTTATTTTTTTT
647629 19/21 TTTTTTTTTCGTTTTTTTTTT
650681 19/21 TTTTTTTTTTTTTGGTTTTTT
650746 18/20 TTTTTTTTCTTTTTTTTTTC
670110 18/20 TTTTTGTTGTTTTTTTTTTT
803524 18/20 TTTTTTTTTTTTATTTGTTT
805649 20/22 TTTTTTTTTTTTTTTCTTTCTT
813957 18/20 TTTTTTCTCTTTTTTTTTTT
932436 18/20 TTTTTTTTTTTTTTTTTTGA
935451 18/20 AAAAAAAAAATAAAAAAATA
938029 20/22 AAAAAAAAACCAAAAAAAAAAA
1097512 19/21 AAAAAAAAAAAGGAAAAAAAA
1145617 22/24 GGGGGGGGGGGGGGGGGGGTGGGC
1386786 18/20 TTTTTTTAGTTTTTTTTTTT
1387064 22/24 AAAAAAAAAGAAAAAAAAAACAAA
1451574 18/20 CCCCCCCCCCCCCCCCCCTA
1452985 20/22 GGGGGGGGGGGGGGGGGGGCGA
1500021 18/20 AAAAAAAATTAAAAAAAAAA
1500394 18/20 AAAAAAAAAGAAAAAAAAAC
1576120 19/21 AAAAAAAAACGAAAAAAAAAA
1600864 20/22 TTTTTTTTTTGTTTTTTTTTTC
1612120 20/22 CCCCCCCCCCCCCCCATCCCCC
1619965 22/24 TTTTTTGTTTTTTTTTTTTTTTTG
1629656 19/21 AAAAAAAAACAAAAAAAAAAT
1651587 20/22 TTTTTTTTTTTTTTTTTTTGCT
1722608 18/20 CCCCCCCCCCCCCCCTTCCC
1773797 18/20 AAAAATTAAAAAAAAAAAAA
1833234 19/21 AAAAAATGAAAAAAAAAAAAA
1857896 21/23 TTTTTTTTTTTTTTTTTTTTTGA
1869655 23/25 TTTTTTTTTTTTTTTTTAATTTTTT
1872727 23/25 TTTTTTTTTCTTTTTTTTGTTTTTT
2039754 18/20 TTTTTTGTTGTTTTTTTTTT
2043146 18/20 AAAAAGAAAAAAATAAAAAA
2052028 18/20 GGGGGGGGGGGGGGGGGAGT
2117288 25/27 TTTTTTTTTTTTTTGGTTTTTTTTTTT
2122238 21/23 AAAAAAAAAACCAAAAAAAAAAA
2123891 19/21 AAAAAAAAAACAAAAAAAAAC
2125800 19/21 GGGGGGGGGGGGGGGGGGGTA
2215208 21/23 TTTTTTTTTTTTTTTTTTTTTGA
2226460 18/20 AAAAAAATAACAAAAAAAAA
2255683 20/22 TTTTTTTTTCTTGTTTTTTTTT
2284231 20/22 TTTTTCTTTTTTTTTTTTTTTC
2358035 20/22 GGGGGGGGGGGGGGGGGGGGTA
2365065 19/21 TTTTTTTTCGTTTTTTTTTTT
2479475 24/26 GGGGGGGGGGGGGGGGGGGGGGTTGG
2483479 25/27 GGGGGGGGGGGGGGGGGGGGGGGGGAT
2556458 18/20 CCCCCCCCCCCCCCCCCCGA
2556523 22/24 TTTTTTTTTATTTTTTTTTTTTAT
2578362 22/24 GGGGGGGGGGGGGGGGGAGGGAGG
2579923 18/20 TTTTTTTTTTGATTTTTTTT
2600443 19/21 AAAAAAAAAAGAAGAAAAAAA
2780001 18/20 TTTTTTATTTTTTTATTTTT
2830876 18/20 TTTTTTTTTTGTTTTTTCTT
2838858 19/21 GGGGGGGGGGGGGGGGGGGAA
2850159 20/22 AAAAAAAAAAAAAAAAAAAAGC
2858743 18/20 AAAAAAAAAAAAAAAGAACA
2862078 20/22 AAAAAAAAAAAAAAGATAAAAA
2891383 18/20 AAAAAAAAAAAAAAAAATTA
2921004 22/24 TTTTTTTTGTTTTTTGTTTTTTTT
3002822 20/22 CCCCCCCCCCCCCCCCCCAACC
3204963 19/21 CCCCCCCCCCCCCCCCCACCG
3222900 20/22 CCCCCCCCCCCCCCCCCAGCCC
3230368 18/20 AAAAAAAATAAAAAAAACAA
3278766 18/20 CCCCCCCCCCCCCCCCCTCA
3292595 19/21 AAAAAAAAAAATTAAAAAAAA
3302791 19/21 CCCCCCCCCCCCCCCCCCCAA
3368451 19/21 AAAAAAAATGAAAAAAAAAAA
3416220 19/21 CCCCCTTCCCCCCCCCCCCCC
3474290 21/23 TTTTTTTTTTTTTTTTTTTTGTA
3545668 21/23 TTTTTTTTTTTTTTTGGTTTTTT
3581281 18/20 TTTTTTTTTGTTTTTTTTTG
3629910 19/21 TTTTTTTTTTCTTTTTTTTAT
3642987 18/20 TTTTTTTTTTTTTAATTTTT
3883174 21/23 AAAAAAGAAAAAAAAAGAAAAAA
3973193 18/20 TTTTTTTCTTTTTTTTTTTC
4200125 19/21 AAAAAAAATAAAAAAAATAAA
4263155 18/20 AAAAAAAAACAAAAAAAAAT
4276854 18/20 AAAAAAAAAAAGAAAAACAA
4289236 20/22 AAAAAAAAAAAAATAAAAACAA
4298908 26/28 TTTTTTTGTTTTTTTTTTGTTTTTTTTT
4308110 19/21 AAAAAAAAAACAAAACAAAAA
4324298 21/23 TTTTTTTTTGTTTTTTGTTTTTT
4381769 18/20 AAAAACAAAAATAAAAAAAA
4392297 18/20 GGGGGGGGGGGGGGGGGTGA
4395993 19/21 TTTTTTTTTTTAATTTTTTTT
4404920 18/20 AAAAAATAAAAAAAAATAAA
4420103 19/21 AAAAATAAAAAAAAAACAAAA
4468311 18/20 TTTTTTTTATTTTTTTTATT
4524514 18/20 AAAAAAAAAAAACAAAAAAG
4715709 18/20 CCCCCCCCCCCCCCCCCCAA
4768691 20/22 CCCCCCCCCCCCCCCCCCCTCA
4772013 19/21 AAAAAAAAAGAAAATAAAAAA
4796967 29/32 TTTTTTTTTTTTTTTTTTTTGATTTTTTTTTC
4846159 19/21 AAAAAAATAAAAATAAAAAAA
4861407 18/20 AAAAAAAAAGAAAGAAAAAA
4867939 18/20 TTTTTTTTATTTTTTTTTTC
5090998 19/21 AAAAAAAAAAAGAAGAAAAAA
5115869 18/20 TTTTTTTTTATTTATTTTTT
5221214 19/21 AAAAAAAAACAAAAAAAAACA
5268736 19/21 GGGGGGGGGGGGGGGGGTGAG
5424576 18/20 AAAAAATTAAAAAAAAAAAA
5425441 18/20 TTTTTCTTTTTATTTTTTTT
5450456 18/20 GGGGGGGGGGGGGGGGGGAA
5585504 18/20 AAAAAAGAAAAAAAGAAAAA
5640092 18/20 AAAAAAAAGAAAGAAAAAAA
5654449 22/24 GGGGGGGGGGGGGGGGGGGGGTGC
5680789 22/24 CCCCCCCCCCCCCCCCCCCCCTTC
5750783 18/20 AAAAAAAAAAAAATAAAAAC
5973351 18/20 TTTTTTCTTTTTTTTTTTTA
6020299 19/21 AAAAAAAAATAAAAAGAAAAA
6042456 23/25 AAAAATAAAAAAAAAAAAAAGAAAA
6087447 19/21 TTTTTTTTTCTTTTTTTTTTG
6261709 18/20 TTTTTTCTGTTTTTTTTTTT
6369490 28/31 CCCCCCCCCCCCCCCCCCCCCCCCCTCCAAC
6389497 20/22 TTTTTTTTTTTTTTTTAATTTT
6467736 18/20 AAAAAATAAAAAATAAAAAA
6484951 19/21 TTTTTTTTTTCTTTTTTTGTT
6745803 18/20 AAAAAAACCAAAAAAAAAAA
6746067 20/22 AAAAAACAAAAAACAAAAAAAA
6780362 26/28 AAAAAAAAAACAAAAAAAAACAAAAAAA
6826656 19/21 TTTTTTGTTTTGTTTTTTTTT
6859449 18/20 TTTTTCTTTTCTTTTTTTTT
7107547 18/20 TTTTTTTTTTGTATTTTTTT
7238659 18/20 CCCCCCCCCCCCCCCTCCGC
7643545 22/24 TTTTTTTTGTTTTTTGTTTTTTTT
7726250 19/21 AAAAAAAAAAAACAAAAAAGA
7745323 19/21 GGGGGGGGGGGGGGGGGAGCG
7769481 18/20 AAAAATAAAAAAAAAATAAA
7836987 19/21 CCCCCCCCCCCCCCCCTCCCG
7955693 22/24 AAAAATAAAAAAAATAAAAAAAAA
7987252 21/23 TTTTTTTTATTTTTTATTTTTTT
8031695 19/21 AAAAAAAAAAAAGAAAAAACA
8240021 22/24 TTTTTTTTTTTTTTTTTTTTTTAG
8328176 21/23 AAAAAAAAACAAAAAGAAAAAAA
8373479 21/23 AAAAAAAAAAAAACAAAAAAAAG
8390712 20/22 AAAAAAGAAAAAAAAAAAAAAT
8610527 18/20 TTTTTCTTTTTTTTTCTTTT
8742078 18/20 TTTTTTTCTTTTCTTTTTTT
9078320 18/20 GGGGGGGGGGGGGGGGGGAC
9220262 18/20 AAAAAAAAAACAATAAAAAA
9378375 18/20 AAAAAAAATAAATAAAAAAA
9382993 23/25 GGGGGGGGGGGGGGGGGGGGGGGAA
9383880 18/20 TTTTTTAGTTTTTTTTTTTT
9417016 18/20 AAAAAAAATAAATAAAAAAA
9421633 23/25 GGGGGGGGGGGGGGGGGGGGGGGAA
9422520 18/20 TTTTTTAGTTTTTTTTTTTT
9477541 20/22 TTTTTTTTTTATTCTTTTTTTT
9478687 24/26 CCCCCCCCCCCCCCCCCCCCCCCGCA
9587781 20/22 CCCCCCCCCCCCCCCCCCACCA
9635601 29/32 TTTTTTTTTTTTTTTTTTTTTTTTTTTGAATT
9663915 18/20 AAAAAAAAACAAAATAAAAA
9716413 19/21 AAAAAAAAAACAAAAAAAATA
9765512 21/23 TTTTTTTATTTTTTTATTTTTTT
9780191 18/20 TTTTTAGTTTTTTTTTTTTT
9806040 18/20 TTTTTTTGTTTTTTTTTTTC
9986200 18/20 TTTTTTTTTCTTTTTTCTTT
10128687 18/20 AAAAAAAAACAAAAAAAATA
10198195 18/20 TTTTTTTGTTGTTTTTTTTT
10217368 18/20 CCCCCCCCCCCCCCCTCCTC
10230521 19/21 TTTTTGTTTTTTTTTTGTTTT
10233968 18/20 TTTTTCGTTTTTTTTTTTTT
10277727 18/20 AAAAAAAAAGAAAAAAAGAA
10280416 18/20 TTTTTTTTTATTTTTTATTT
10340054 18/20 TTTTTTTTTATTTTTTTTTC
10450453 19/21 AAAAAAAAAAAAAAACTAAAA
10453594 21/23 GGGGGGGGGGGGGGCGGGGGGGA
10508712 18/20 AAAAAAAAACAAAAAAAAAT
10604836 18/20 AAAAAAAAACAAAAAAAAAT
10712024 18/20 AAAAAAAAAAACAAAAAAGA
10901618 18/20 AAAAAAAAAAACAAAAAAGA
11046003 18/20 TTTTTTTCTTTTTGTTTTTT
11190432 19/21 TTTTTTTATTTTTTTTTTTTG
11260703 20/22 AAAAAAAAAACAGAAAAAAAAA
11274860 18/20 TTTTTTCTTTTTTTTTCTTT
11282672 19/21 AAAAAAAAAAGAAAGAAAAAA
11283026 21/23 AAAAAAAAAAAGAAAAAAAAACA
11283093 18/20 AAAAAAAACGAAAAAAAAAA
11290031 19/21 CCCCCCCCCCCCCCCCCCCTT
11307790 19/21 TTTTTTTTGTTGTTTTTTTTT
11318887 19/21 AAAAAAAAGAAAAAATAAAAA
11321280 18/20 TTTTTATTTTTTTATTTTTT
11345126 18/20 TTTTTTTTTTCTCTTTTTTT
11441548 19/21 GGGGGGGGGGGGGGGGGGTGA
11455762 18/20 TTTTTTTTTCATTTTTTTTT
11499791 18/20 AAAAAAAAAGAAAAAAAAAC
11689325 18/20 GGGGGGGGGGGGGGGGGGAC
11727271 18/20 TTTTTTTTTTTGGTTTTTTT
11770526 18/20 AAAAAAAAAAAACAAGAAAA
11791142 18/20 TTTTTTTTTATTTTTTTATT
11802379 18/20 TTTTTTTTTTTTTCATTTTT
11865622 20/22 TTTTTTTGTTTTTTTTTTTTTA
11876723 18/20 TTTTTTTTATTTTATTTTTT
11899788 18/20 TTTTTTTTTTTGGTTTTTTT
11943057 18/20 AAAAAAAAAAAACAAGAAAA
11971231 18/20 AAAAATTAAAAAAAAAAAAA
11979496 18/20 AAAAAAAAGAAGAAAAAAAA
12028395 19/21 AAAAAAAAATACAAAAAAAAA
12084883 18/20 TTTTTTTGTTTTTTTTTTTG
12091075 24/26 AAAAAAAAATAAAAAACAAAAAAAAA
12118923 18/20 AAAAATTAAAAAAAAAAAAA
12127184 18/20 AAAAAAAAGAAGAAAAAAAA
12176070 18/20 AAAAAAAATACAAAAAAAAA
12282351 20/22 AAAAAAAATAAAAAATAAAAAA
12288557 18/20 AAAAAAAAAAACAGAAAAAA
12338436 20/22 AAAAAAAAAAAAAAAAAAGAAT
12350535 18/20 AAAAAAAAATATAAAAAAAA
12352219 19/21 AAAAAACAAAAAGAAAAAAAA
12392211 19/21 AAAAAAAAAGAAAAAAAAAAG
12397609 20/22 AAAAAAAAAATAATAAAAAAAA
12402047 25/27 AAAAAACAAAAAAAAACAAAAAAAAAA
12402550 19/21 AAAAAAAAACCAAAAAAAAAA
12421131 19/21 TTTTTTTTCTTTTTTTTTCTT
12423448 24/26 CCCCCTCCCCCCCCCCCGCCCCCCCC
12469343 18/20 TTTTTTCTTTTTGTTTTTTT
12481572 18/20 TTTTTTTTTATTTTTTTATT
12496129 21/23 AAAAAAAAAATAAATAAAAAAAA
12528455 20/22 AAAAAAAATAAAAAATAAAAAA
12534661 18/20 AAAAAAAAAAACAGAAAAAA
12584530 20/22 AAAAAAAAAAAAAAAAAAGAAT
12598311 19/21 AAAAAACAAAAAGAAAAAAAA
12638294 19/21 AAAAAAAAAGAAAAAAAAAAG
12643692 20/22 AAAAAAAAAATAATAAAAAAAA
12648129 25/27 AAAAAACAAAAAAAAACAAAAAAAAAA
12648632 19/21 AAAAAAAAACCAAAAAAAAAA
12668348 18/20 TTTTTTCTTTTCTTTTTTTT
12690745 20/22 TTTTTTTTTTTCATTTTTTTTT
12767268 22/24 AAAAATAAAAAAAAAAAAAAAAAT
12794734 19/21 AAAAAAAAAAACAAAGAAAAA
12981070 24/26 CCCCCCCCCCCCCCCCCCCCCCCCAA
12999843 20/22 AAAAAAAAAAACAAAAAAATAA
13021896 19/21 AAAAAAAAACAAAAAAATAAA
13054183 18/20 AAAAAAAAAAAAAAAATATA
13150898 23/25 AAAAAAAAAATAAAAATAAAAAAAA
13189009 18/20 TTTTTTCTTTTTTTTTTTTG
13228854 19/21 AAAAAAAAAACAAAAAAAAAC
13243607 22/24 AAAAAAAAAACAAAAAAATAAAAA
13297366 18/20 TTTTTATTTTCTTTTTTTTT
13327432 22/24 TTTTTTTTTTTTAGTTTTTTTTTT
13352726 18/20 TTTTTATTTTCTTTTTTTTT
13382792 22/24 TTTTTTTTTTTTAGTTTTTTTTTT
13419274 18/20 TTTTTTTGTTTTTTTTTTTG
13419945 18/20 TTTTTTTGTTTTTTTTGTTT
13432452 19/21 TTTTTTTTTATTTTTTTATTT
13497280 18/20 AAAAAAAAAAGAAAAAAAAC
13511865 18/20 AAAAAAAATAAAAAATAAAA
13577520 18/20 AAAAAAATAAGAAAAAAAAA
13580088 18/20 TTTTTTTTTTTGATTTTTTT
13585702 25/27 TTTTTTTTTTTTTTTTTTTTTTTTTAA
13607839 18/20 AAAAAAATAAGAAAAAAAAA
13610407 18/20 TTTTTTTTTTTGATTTTTTT
13616021 25/27 TTTTTTTTTTTTTTTTTTTTTTTTTAA
13623189 20/22 AAAAAAAATGAAAAAAAAAAAA
13627118 18/20 TTTTTTTTCTTTTTTTTTTA
13635352 18/20 AAAAAAAACAAAAACAAAAA
13699225 24/26 TTTTTTTTTTTTTTTTTTTTTTTACT
13753615 19/21 AAAAAAAAAAATAATAAAAAA
13763936 18/20 TTTTTTTTCTTTTTTTTTGT
13771039 18/20 AAAAAAAAACAAAAAAAAAC
13911157 19/21 TTTTTTTTTGTTTTTTTTTTC
13935744 19/21 AAAAAAAAAAAACGAAAAAAA
13938782 18/20 AAAAAAACAACAAAAAAAAA
13959300 18/20 AAAAAAAAATAGAAAAAAAA
13979645 20/22 AAAAAAAAAAGAAAGAAAAAAA
14163222 18/20 TTTTTTTGTTTTCTTTTTTT
14222494 20/22 AAAAAAAAAAAAAACCAAAAAA
14237563 19/21 TTTTTTATTTTTTATTTTTTT
14324895 19/21 AAAAAAAAAAACAAAAAAAAT
14329496 19/21 TTTTTTTTTTTTTTTTTTTCA
14370960 19/21 AAAAAAAAAAACAAAAAAAAT
14485190 19/21 AAAAAAAAAATAAAAAAAAAT
14496488 19/21 AAAAATTAAAAAAAAAAAAAA
14509681 18/20 TTTTTCTTTTGTTTTTTTTT
14525920 18/20 AAAAAAGAAACAAAAAAAAA
14534581 18/20 TTTTTTTTTTGTTTTTTTTA
14542704 18/20 TTTTTTTGTTTTTTTTTTTA
14562874 20/22 TTTTTTTTTTATTCTTTTTTTT
14564020 24/26 CCCCCCCCCCCCCCCCCCCCCCCGCA
14583793 23/25 GGGGGGGGGGGGGGGGGGGGGGGTT
14584940 20/22 AAAAAAAAGAATAAAAAAAAAA
14614361 18/20 AAAAAAACAAAAAATAAAAA
14614530 18/20 AAAAAAACAAAAAATAAAAA
14761106 21/23 TTTTTTTTTTTTGGTTTTTTTTT
14779158 18/20 TTTTTTTCTTTTTTTTTTCT
14825367 18/20 AAAAAACAAAAAAATAAAAA
14853879 19/21 TTTTTTTTCTTTTTTTTCTTT
14896216 18/20 AAAAAAAAGGAAAAAAAAAA
14942191 18/20 TTTTTCTTTTTTTTTCTTTT
14949077 18/20 AAAAAAAACAAAAAAAAAGA
14982847 19/21 TTTTTTTTTTTTTTGGTTTTT
15015039 18/20 TTTTTTTTTTGTTTTTTTTC
15143081 19/21 TTTTTTGTTTTTTTTGTTTTT
15178980 18/20 AAAAAAAAAATAAAAAATAA
15222172 19/21 AAAAAAAAAAGAAAAAAGAAA
15242944 18/20 TTTTTTTTTTAATTTTTTTT
15302324 19/21 AAAAAAAAAAGAAAAAAGAAA
15323098 18/20 TTTTTTTTTTAATTTTTTTT
15452197 19/21 TTTTTTTTTGGTTTTTTTTTT
15452248 18/20 TTTTTTGTTTTTTGTTTTTT
15452290 18/20 TTTTTTGTTTTTTGTTTTTT
15477921 19/21 TTTTTTTTTTTTTTTTATTTG
15482818 31/34 TTTTTTTTTTTTTTTTTTTTTTTTTTTACTGTTT
15489190 19/21 AAAAAAAATAAAAAATAAAAA
15495660 18/20 TTTTTTTTTTTTTTTTTTCA
15510278 19/21 AAAAAAAAAAGAAAAAAAAAG
15547533 23/25 CCCCCCCCCCCCCCCCCCCCCCCGA
15608995 19/21 AAAAAAAAAAACACAAAAAAA
15711759 19/21 TTTTTTTTTGTTTTTTTTTTC
15810060 18/20 TTTTTTTTTTTTGATTTTTT
----------------------------------------------------------------------------
Total sequence length......................... 15887371
Total number of repeats detected.............. 335
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 148 133 23 27
30 to 39 0 3 0 1
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 148 136 23 28
----------------------------------------------------------------------------
Mono-Nucleotide Repeats in C. elegans Chromosome-IV complete sequence
Minimum repeat length = 20 (allowing maximum 10% mismatch)
Total 1 sequences searched with 15887371 base pairs
Total 335 repeats covering 6495 / 7169 base pairs
Length distribution of all Mono-nucleotide repeats
---------------------------------------------------------------------------------------------------------
repeat-length 20-29 30-39 40-49 50-59 60-69 70-79 80-89 90-99 100-and-more
no. of repeats 331 4 0 0 0 0 0 0 0
---------------------------------------------------------------------------------------------------------
Number of repeats
----------------------------------------------------------------------------------------
Sequence A T G C
----------------------------------------------------------------------------------------
lcl|chr_IV 15887371 bp 148 136 23 28
----------------------------------------------------------------------------------------
Total 15887371 bp 148 136 23 28
----------------------------------------------------------------------------------------
Repeats >= 40 bp Total> 0 0 0 0 0
----------------------------------------------------------------------------------------
© Division of Biochemical Sciences, National Chemical Laboratory, Pune 411008, INDIA