Mono-Nucleotide Repeats in Genomic DNA Sequences
Mono-Nucleotide Repeats in
C. elegans Chromosome-III complete sequence
Genomic Sequence:
lcl|chr_III
Position Repeat-length Repeat
2845 31/34 AAAAAAAAAAACCAAAAAAAAAAAAAAAAAAAAG
3182 20/22 CCCCCCCCCCCCCCCCCCGCCT
8200 21/23 AAAAAAAAAAAACGAAAAAAAAA
24186 19/21 TTTTTTTTTTTTTGATTTTTT
24402 19/21 TTTTTTTTCTTTTCTTTTTTT
30360 18/20 GGGGGGGGGGGGGGGGGGAT
40784 19/21 TTTTTTTATGTTTTTTTTTTT
48314 18/20 TTTTTTTTTCATTTTTTTTT
50927 21/23 AAAAAAAAAAAAAAAAAAAAAGT
58167 19/21 AAAAAAAAAGAAAAAAAAAAC
86864 26/28 AAAAAATTAAAAAAAAAAAAAAAAAAAA
111997 19/21 CCCCCCCCCCCCCCCCCCCAA
195218 30/33 AAAAAAAAATTAAAAAAAAAAAAAAAAAAAAAC
195666 19/21 AAAAAAAAAACCAAAAAAAAA
195971 22/24 AAAAAAAAAAACCAAAAAAAAAAA
212024 21/23 GGGGGGGGGGGGGGGGGGGAGAG
223352 18/20 AAAAAAAAACAAAGAAAAAA
238984 19/21 TTTTTTAGTTTTTTTTTTTTT
278411 21/23 TTTTTTTTTTTTTGGTTTTTTTT
364586 18/20 AAAAAAAAAATAAAACAAAA
390636 20/22 AAAAAAAAAAAAAAAAAAACAG
427889 22/24 TTTTTTTTTTGTTTTTTTTTCTTT
437831 18/20 CCCCCCCCCCCCCCCCCACT
477069 19/21 CCCCCCCCCCCCCCCTCCCCG
501669 18/20 AAAAAAAAAAAAACTAAAAA
639100 21/23 TTTTTTTATTTTTTTTATTTTTT
668999 21/23 CCCCCCCCCCCCCCCCCCCCCAT
669965 20/22 CCCCCCCCCCCCCCCCCCCATC
775287 18/20 TTTTTTGTTTTTTGTTTTTT
777515 18/20 TTTTTTTTTTTACTTTTTTT
834251 18/20 AAAAAAAAAAAAAAAAAACT
838038 19/21 AAAAAAAAAACAAAAGAAAAA
849005 19/21 TTTTTTTTTTGCTTTTTTTTT
882975 18/20 AAAAAAAAAAAAAAAAAATT
889331 19/21 AAAAAAAAAAAAAAAAAAGAT
890534 20/22 AAAAAAAAAAAAAAAAAAAATT
900619 19/21 TTTTTTTTTTTATTTTTTGTT
954853 21/23 AAAAAAAAAAAAAAAAATAATAA
962313 19/21 AAAAAAAAAAAAAAAAAAATT
971861 18/20 TTTTTTTTTTTAATTTTTTT
972502 19/21 AAAAAAATTAAAAAAAAAAAA
981432 20/22 AAAAAAAAGAAAAAAAAAAGAA
989262 18/20 AAAAAAAGAAAATAAAAAAA
1048839 31/34 AAAAACCAAAAAAAAAAAAAAAAAAAAAAAAAAC
1079200 22/24 TTTTTTTTTTTTGTTTTCTTTTTT
1081398 23/25 AAAAAAAAAAAAAAAAAAAAAGAAT
1086117 29/32 AAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGC
1087053 18/20 TTTTTTTATTTTTATTTTTT
1088632 25/27 TTTTTTTTTTTTTTTTTTTTTTTTATG
1256568 19/21 TTTTTTTTAATTTTTTTTTTT
1277715 32/35 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCAGA
1316930 19/21 AAAAAAAATAATAAAAAAAAA
1317629 18/20 AAAAAAAACCAAAAAAAAAA
1323258 27/30 AAAAAAACGAAAAAAAAAAAAAAAAAAAAC
1330229 34/37 TTTTTTTACTTTTTTTTTTTTTTTTTTTTTTTTTTTA
1370043 18/20 AAAAAAAAGAAAAATAAAAA
1371671 20/22 CCCCCCCCCCCCCCCCACCCAC
1371998 26/28 AAAAAAAAAAAAAAAAAAAAAAAAAATT
1391098 18/20 AAAAAAAATAAAAAAAATAA
1398066 19/21 AAAAAAAAAAGGAAAAAAAAA
1405571 24/26 TTTTTTTTTTCTTTTTTTTTTTTTTG
1407103 19/21 GGGGGGGGGGGGGGGGGGGAT
1409797 23/25 GGGGGGGGGGGGGGGGGGGGTGGAG
1410463 21/23 AAAAAACCAAAAAAAAAAAAAAA
1446088 27/30 AAAAAAAAAAAAAAAAAAAACCAAAAAAAC
1546849 18/20 TTTTTTTTTTTTTTTGATTT
1554046 19/21 CCCCCTCCCCCCCCCCCCCTC
1562444 19/21 TTTTTTTGATTTTTTTTTTTT
1576624 18/20 AAAAAAAGAAAAAAAAAAGA
1635839 19/21 AAAAAACAAAAAACAAAAAAA
1685867 22/24 CCCCCCCCCCCCCCCCCCCCACTC
1687858 19/21 AAAAAAAAACAAAAAAATAAA
1758859 18/20 AAAAAAAATAAAAAATAAAA
1801415 18/20 AAAAAAAAAAAGAAAGAAAA
1804699 18/20 GGGGGGGGGGGGGGGGGGTC
1805456 19/21 AAAAAAAAAAAAACTAAAAAA
1858169 19/21 AAAAAAAAGCAAAAAAAAAAA
1950830 18/20 TTTTTTTTGTGTTTTTTTTT
1953911 26/28 AAAAAAAAAATTAAAAAAAAAAAAAAAA
1957497 18/20 TTTTTTTTTCTTTTTTTGTT
1976024 19/21 AAAAAATGAAAAAAAAAAAAA
1982553 22/24 TTTTTTTTTTTTTTTTTTAATTTT
2027465 18/20 TTTTTAGTTTTTTTTTTTTT
2049205 25/27 AAAAAAAAAAAAAAAAAAAATTAAAAA
2054511 18/20 AAAAAAAAATAACAAAAAAA
2087417 18/20 AAAAAAAAGAAAAAAAAAGA
2090202 19/21 GGGGGGGGGGGGGGGGGGGTT
2094485 19/21 TTTTTTTTTTGTTTTTTGTTT
2209640 22/24 AAAAAAAAAAAAAAAAAAATCAAA
2252530 18/20 TTTTTTGTTTTTGTTTTTTT
2286877 18/20 AAAAAAAAAAAAGAAAAACA
2313366 18/20 AAAAAAAAAAAATACAAAAA
2338555 18/20 TTTTTTTTTTTTAATTTTTT
2342740 19/21 TTTTTTTTTTTTGGTTTTTTT
2361196 19/21 AAAAAAAAAAAAACCAAAAAA
2404689 21/23 CCCCCCCCCCCCCCCCCCCCCGA
2406162 21/23 GGGGGGGGGGGGGGGGGGGGGTA
2412136 21/23 GGGGGGGGGGGGGGGGGGTGAGG
2448928 19/21 TTTTTTTATTTTTTTTATTTT
2450079 18/20 TTTTTTTTTTTCATTTTTTT
2475803 18/20 TTTTTTTTTTTTTCATTTTT
2509203 18/20 TTTTTTTTGTTTTTTTTTTA
2549747 20/22 AAAAAATGAAAAAAAAAAAAAA
2670795 33/36 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGATAGG
2715101 18/20 AAAAAAAAACAAAAAAAAAT
2726874 22/24 AAAAAAAAAAAAACAATAAAAAAA
2729454 18/20 AAAAAAAAAAAAATAAAATA
2761055 18/20 CCCCCCCCCCCCCCCCCTTC
2919232 19/21 CCCCCCCCCCCCCCCCATCCC
2956732 22/24 AAAAAAATCAAAAAAAAAAAAAAA
2984361 18/20 AAAAAATGAAAAAAAAAAAA
2984840 18/20 TTTTTTATTTTTTATTTTTT
3135988 21/23 TTTTTTTTTATTTATTTTTTTTT
3228099 18/20 AAAAAAAAAGAAAAAATAAA
3308803 18/20 TTTTTTATTTTTTATTTTTT
3330634 19/21 AAAAAAAACAAAAAAAACAAA
3369667 20/22 TTTTTTTTGTTTTTTGTTTTTT
3398789 18/20 AAAAAAATACAAAAAAAAAA
3515808 18/20 TTTTTATTTGTTTTTTTTTT
3517410 30/33 AAAAAAAAAAAAAAAAAAAAAAAAACAGAAAAC
3599241 18/20 AAAAAAAAAAACAAGAAAAA
3610951 20/22 AAAAAAAAAAGAAAAAAAACAA
3635710 18/20 GGGGGGGGGGGGGGGGGGTT
3697826 18/20 TTTTTTTTTGTTTTTATTTT
3729943 20/22 TTTTTTTGTTGTTTTTTTTTTT
3820641 26/28 CCCCCCCCCCCCCCCCCCCCCCCCCAAC
3882792 22/24 TTTTTTTATTTTTTTTTATTTTTT
3923560 19/21 AAAAAAAAAGTAAAAAAAAAA
3969256 18/20 GGGGGGGGGGGGGGGGGGTT
3980691 20/22 TTTTTTTTTGTTTTTCTTTTTT
3995094 18/20 AAAAAAAAACAAAAAAAAAT
4016090 18/20 AAAAAAAAATAATAAAAAAA
4269413 24/26 TTTTTCTTTTTTTTTTTTTTTTTTCT
4343776 19/21 AAAAATTAAAAAAAAAAAAAA
4736726 19/21 AAAAACAAAAAAAAACAAAAA
4807847 19/21 AAAAATAAAAAATAAAAAAAA
5006590 18/20 AAAAAAATAAAAAAAAGAAA
5231897 18/20 AAAAAAAAAAGAACAAAAAA
5324074 18/20 TTTTTTTCTTTTTTTTTTGT
5490562 18/20 TTTTTTCTTTTTTTTTGTTT
5499078 18/20 TTTTTTTTGTTTTTTTTTTC
5555631 18/20 AAAAAATAAAAAATAAAAAA
5633324 19/21 CCCCCCCCCCCCCCCCCCCTG
5671927 19/21 TTTTTTGGTTTTTTTTTTTTT
5696875 18/20 AAAAAAGAAAAAAAAGAAAA
5714002 25/27 AAAAAAAAAAACAAAAAAAAAAACAAA
5740870 22/24 CCCCCCCCCCCCCCCCCCCCCACT
5825454 18/20 AAAAAAAAAACGAAAAAAAA
5859853 18/20 TTTTTTTTTTTTTGTATTTT
5961578 19/21 AAAAAAAAAAAAAAAAACAAC
6205593 25/27 TTTTTTTTTTTTTTTTTTTTTTTTTGA
6324274 18/20 CCCCCCCCCCCCCCCCCCAT
6382340 21/23 CCCCCCCCCCCCCCCCCCCCGCT
6417416 18/20 TTTTTTTTCCTTTTTTTTTT
6424312 18/20 TTTTTTTTTTCTTTTTTTTA
6429700 18/20 AAAAATCAAAAAAAAAAAAA
6443323 18/20 TTTTTTGTTTTCTTTTTTTT
6493021 19/21 CCCCCCCCCCCCCCCCCCCAA
6642194 18/20 AAAAAAAAACAAACAAAAAA
6745780 22/24 AAAAAAAAAAAAAAAAAAGAAATA
6835768 18/20 TTTTTTTTTTAATTTTTTTT
6979936 18/20 AAAAAAAAAACAATAAAAAA
7077196 18/20 AAAAAAAACCAAAAAAAAAA
7087944 19/21 GGGGGGGGGGGGGGGGGAGGT
7112576 19/21 GGGGGGGGGGGGGGGGGGGTC
7191199 21/23 TTTTTATTTTGTTTTTTTTTTTT
7255198 21/23 CCCCCCCCCCCCCCCCCCCCCAA
7277731 21/23 CCCCCCCCCCCCCCCCCCCCCGG
7334287 19/21 AAAAAAAGAAAAAAAAACAAA
7390665 25/27 CCCCCCCCCCCCCCCCCCCTCCCCCCG
7430151 23/25 AAAAAAAAAAAACAAAAAAAAATAA
7505198 23/25 AAAAAAAAAAACAAAAATAAAAAAA
7573078 20/22 TTTTTTGTTTTATTTTTTTTTT
7583518 18/20 AAAAAGAAAAAAAAAGAAAA
7591431 22/24 TTTTTTTTTCTTTTTTTTCTTTTT
7703093 18/20 TTTTTTTTTTTTTTTCATTT
7724581 23/25 TTTTTTTTTTTTTTTTATTTGTTTT
7760970 18/20 AAAAAAAATAAAAAGAAAAA
7877763 19/21 CCCCCCCCCCCCCCCCCCTCT
7968407 19/21 AAAAAAAAAAAAATTAAAAAA
8096173 18/20 AAAAAAAGAAAGAAAAAAAA
8229198 18/20 GGGGGGGGGGGGGGAGGGAG
8253807 18/20 TTTTTTGTTTTTTGTTTTTT
8316769 20/22 AAAAAAAAAAGAAAAAAAAACA
8327283 20/22 CCCCCCCCCCCCCCCCCCACTC
8383566 19/21 AAAAAAAAACAAAAAAAAACA
8406674 21/23 AAAAAAAAAAAAAAAAAAATATA
8441587 26/28 TTTTTTTTTTCTTTCTTTTTTTTTTTTT
8495267 31/34 TTTTTTTTTTTTATTTTTTTTTATTTTTTTTTTA
8520858 26/28 TTTTTTTTTTTTTTTTTTTTTTAATTTT
8669670 18/20 TTTTTTTTGTTTTTTTCTTT
8680284 19/21 AAAAAAAAAGAAAGAAAAAAA
8726260 18/20 AAAAAAGAAAAAAAAAAAAG
8826110 18/20 AAAAAAAAAACAAAAAAACA
8943237 18/20 TTTTTTGTTTTTTTTTTTTG
8950775 22/24 CCCCCCCCCCCCCCCCCCCCCACT
9042583 18/20 TTTTTTTTCTTTTTTTTTTG
9121138 19/21 TTTTTTTATTTTTTTATTTTT
9191294 19/21 TTTTTTTATTTTTTTATTTTT
9247346 18/20 TTTTTTTTCTTTTTTTTTTG
9336068 19/21 AAAAAAAAAACAAAAAATAAA
9354131 18/20 CCCCCCCCCCCCCCTCCCCT
9370128 18/20 GGGGGGGGGGGGGGGGGGAA
9374839 22/24 TTTTTTTTTCGTTTTTTTTTTTTT
9391544 18/20 TTTTTTTTTTTTGATTTTTT
9395490 20/22 TTTTTTTTTTTTTTCGTTTTTT
9461513 18/20 CCCCCCCCCCCCCCCCCAGC
9476500 19/21 AAAAAAAAAACAAAAAAAAAG
9525787 18/20 AAAAAAAAAAAAAAAACTAA
9526774 18/20 AAAAAAAAAAGGAAAAAAAA
9553851 21/23 CCCCCCCCCCCCCCCCCCCCCTT
9605656 19/21 GGGGGGGGGGGGGGGGGGGCC
9619857 18/20 TTTTTTTTTATTTTCTTTTT
9661704 18/20 TTTTTTTTTTTTTTTTTAGT
9695215 19/21 AAAAAAAACCAAAAAAAAAAA
9703979 18/20 AAAAAACAAAACAAAAAAAA
9721828 19/21 TTTTTCTTTTTTTTTTTCTTT
9726141 18/20 TTTTTTTTTTCATTTTTTTT
9744724 19/21 TTTTTTTTTTCGTTTTTTTTT
9748235 19/21 AAAAAACAAAAAAAAAAGAAA
9749836 18/20 CCCCCCCCCCCCCCCCCATC
9751422 20/22 CCCCCCCCCCCCCCCCCCCACA
9790337 18/20 AAAAAAAAAAAAAGCAAAAA
9799931 19/21 CCCCCCCCCCCCCCCCCCAAC
9822599 19/21 CCCCCCCCCCCCCCCTCCCCG
9824057 18/20 AAAAAAAAAAACAAAAAAAT
9859718 18/20 CCCCCCCCCCCCCCCCCCAG
9872362 19/21 AAAAAAAAAAAATAAAAAACA
9879297 18/20 AAAAAAAAAATCAAAAAAAA
9914313 19/21 TTTTTTTTTTTTAGTTTTTTT
9918231 18/20 TTTTTTATTGTTTTTTTTTT
9925793 18/20 TTTTTTTTTTTTTTTCATTT
9933321 19/21 TTTTTTTTTTTTTTTTTGCTT
9984602 20/22 AAAAAAAAAACAAAAAAGAAAA
10061925 20/22 TTTTTTTTTGTTTTTTTTTTTG
10100572 21/23 AAAAAAAAAAAAAAAAATAAAAT
10120616 18/20 AAAAAAAAAAAAAGGAAAAA
10121326 21/23 AAAAACAAAAAAAAAACAAAAAA
10137343 25/27 AAAAAAAAAAAAATTAAAAAAAAAAAA
10146789 19/21 AAAAAACAAAAAAATAAAAAA
10175632 20/22 AAAAAAAAATAAGAAAAAAAAA
10216224 18/20 AAAAAAAAAAAACAAAAACA
10253282 19/21 AAAAAAAGAAACAAAAAAAAA
10267590 18/20 AAAAAAACTAAAAAAAAAAA
10285820 21/23 AAAAAAAAAAAAAAAAAAAACCA
10288895 27/30 TTTTTTTTACTTTTTTTTTTTTTTTTTTTG
10295038 20/22 AAAAAAAATTAAAAAAAAAAAA
10329975 18/20 CCCCCCCCCCCCCCCCCCAT
10342297 18/20 TTTTTTTTTGGTTTTTTTTT
10366036 18/20 TTTTTTTTTTGTTTTTTGTT
10443202 22/24 CCCCCCCCCCCCCCCCTCCCCTCC
10465914 18/20 CCCCCCCCCCCCCCCCCCAT
10478236 18/20 TTTTTTTTTGGTTTTTTTTT
10501975 18/20 TTTTTTTTTTGTTTTTTGTT
10579141 22/24 CCCCCCCCCCCCCCCCTCCCCTCC
10583304 19/21 GGGGGGGGGGGGGGGGGAGGA
10585027 23/25 TTTTTTTTTTTTTTTTTTTTTTTGG
10586240 20/22 CCCCCCCCCCCCCCCCGCCCAC
10598369 19/21 AAAAAAAAACAAAAAAAAAAT
10606285 18/20 AAAAAAAACCAAAAAAAAAA
10606590 22/24 AAAAAAACCAAAAAAAAAAAAAAA
10622311 18/20 TTTTTTTTTTTTTGCTTTTT
10624114 19/21 AAAAAAAAAAAATAAATAAAA
10626276 28/31 AAAAAAATGAAAAAAAAAAAAAAAAAAAAAC
10628408 18/20 TTTTTTATTTTTTTATTTTT
10649629 19/21 AAAAAAAAAAAGAAGAAAAAA
10676257 21/23 AAAAACAAAAAAAAAAAAAAAAC
10710197 20/22 CCCCCCCCCCCCCCCCCCCCGA
10725938 18/20 GGGGGAGGGGGGGGGGGGCG
10726261 19/21 AAAAAAAAACAAAAAAAAAAT
10727977 19/21 AAAAAAAAAACAACAAAAAAA
10729901 22/24 TTTTTTTTTTTTTGGTTTTTTTTT
10759010 23/25 CCCCCCCCCCCCCCCCCCCCCCACT
10760532 23/25 TTTTTCGTTTTTTTTTTTTTTTTTT
10762937 23/25 TTTTTTTTTTGTTTTTTTTTTTTTG
10765516 19/21 TTTTTTTTTTGTTGTTTTTTT
10806661 19/21 TTTTTTATTTTATTTTTTTTT
10823826 18/20 AAAAAAATCAAAAAAAAAAA
10846945 19/21 AAAAAAAAAAAAAAATAATAA
10850066 22/24 TTTTTTTTTTTTTTTTTTTAATTT
10850894 22/24 TTTTTTTTTTTGTTTTTTGTTTTT
10851214 18/20 TTTTTCTTTCTTTTTTTTTT
10851565 20/22 TTTTTTTTTTTTTTTAATTTTT
10881503 19/21 TTTTTTGTTTTTTTTGTTTTT
10906191 18/20 AAAAAAAAAAAGAAAAAAAT
10906324 18/20 AAAAAAAATGAAAAAAAAAA
10911834 19/21 AAAAAAAACGAAAAAAAAAAA
10911966 18/20 TTTTTTTTTGTTTTTTTTTC
10912574 19/21 TTTTTTTAATTTTTTTTTTTT
10918704 18/20 AAAAAATTAAAAAAAAAAAA
10931102 23/25 AAAAAAAAAATTAAAAAAAAAAAAA
10939321 18/20 AAAAAAAAATAAAAAAAATA
10945007 19/21 TTTTTTTTTTGTTGTTTTTTT
10992764 18/20 GGGGGGGGGGGGGGGGGGAC
10994844 19/21 AAAAAAAAATAAAATAAAAAA
11029738 19/21 AAAAAAAAAAAAAAATAATAA
11032860 22/24 TTTTTTTTTTTTTTTTTTTAATTT
11033688 22/24 TTTTTTTTTTTGTTTTTTGTTTTT
11034010 18/20 TTTTTCTTTCTTTTTTTTTT
11034361 20/22 TTTTTTTTTTTTTTTAATTTTT
11064715 19/21 TTTTTTGTTTTTTTTGTTTTT
11089402 18/20 AAAAAAAAAAAGAAAAAAAT
11089535 18/20 AAAAAAAATGAAAAAAAAAA
11095045 19/21 AAAAAAAACGAAAAAAAAAAA
11095177 18/20 TTTTTTTTTGTTTTTTTTTC
11095785 19/21 TTTTTTTAATTTTTTTTTTTT
11101915 18/20 AAAAAATTAAAAAAAAAAAA
11114429 23/25 AAAAAAAAAATTAAAAAAAAAAAAA
11123851 18/20 AAAAAAAAATAAAAAAAATA
11144541 22/24 AAAAAAAAAAAAAAACGAAAAAAA
11152885 20/22 AAAAAAAAAAAAAACTAAAAAA
11167141 19/21 AAAAAAAAACAAAAAAAAATA
11225626 19/21 TTTTTTTTTTTTTTTAATTTT
11243950 19/21 AAAAAAAAAAAAAAACAGAAA
11273375 18/20 AAAAAAAAAAGAAAAAAAAG
11282289 19/21 AAAAAAAAAAAAAAACAGAAA
11311714 18/20 AAAAAAAAAAGAAAAAAAAG
11329178 26/28 TTTTTTTTTTCTTTTTTTTTTTTTTTTC
11355306 21/23 TTTTTTTTCTTTTTTTTTTTCTT
11374098 18/20 AAAAAAACAACAAAAAAAAA
11405253 18/20 AAAAAACAACAAAAAAAAAA
11438543 20/22 AAAAAAAAAAAAAAAAAAAATT
11444447 22/24 CCCCCCCCCCCCCCCCCCCCCACT
11468411 20/22 TTTTTTTTGTGTTTTTTTTTTT
11471127 18/20 TTTTTCTTTTTTATTTTTTT
11487178 18/20 AAAAAAAAAAAAAAAACTAA
11560647 19/21 TTTTTTTTTGTTTTTTTTTCT
11588067 22/24 CCCCCCCCCCCCCCCCCCCCGCCG
11620169 18/20 TTTTTGTTTGTTTTTTTTTT
11635897 19/21 TTTTTTTTTTTTTTAGTTTTT
11637701 20/22 TTTTTTCTTTTTTCTTTTTTTT
11639702 18/20 TTTTTTTTTTTTTTAATTTT
11661622 19/21 TTTTTTTTTTGTGTTTTTTTT
11675032 18/20 TTTTTTTTTTTTGGTTTTTT
11682447 21/23 CCCCCCCCCCCCCCCCCCCCCAT
11693454 18/20 TTTTTTTGTTTTTTTTTTTC
11706603 19/21 TTTTTTTTTTGGTTTTTTTTT
11712089 20/22 TTTTTTTTGTTTTTTTGTTTTT
11776828 19/21 TTTTTTTTTGTATTTTTTTTT
11776904 19/21 TTTTTTGTTTTTTTTTTTTTG
11777012 18/20 TTTTTTTTTTGGTTTTTTTT
11789660 25/27 AAAAAAAAAAAACAAAAAACAAAAAAA
11803764 21/23 TTTTTTTATTTTTTTTTATTTTT
11821920 19/21 AAAAAAGAAAAAAAAACAAAA
11869270 22/24 GGGGGGGGGGGGGGGGGGGGGTGA
11906962 20/22 TTTTTTTGTTTTTTTTTTTTTG
11908160 21/23 TTTTTTTGTGTTTTTTTTTTTTT
11972189 18/20 TTTTTTTTGTTTTTTTTTTC
11996765 22/24 CCCCCCCCCCCCCCCCCCCCCCGT
12042730 18/20 AAAAAAAAAAAGAAAAAAAT
12048701 20/22 AAAAAAAACAAAAAAAAAAGAA
----------------------------------------------------------------------------
Total sequence length......................... 12114540
Total number of repeats detected.............. 351
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 148 128 19 43
30 to 39 8 3 1 1
40 to 49 0 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 156 131 20 44
----------------------------------------------------------------------------
Mono-Nucleotide Repeats in C. elegans Chromosome-III complete sequence
Minimum repeat length = 20 (allowing maximum 10% mismatch)
Total 1 sequences searched with 12114540 base pairs
Total 351 repeats covering 6986 / 7701 base pairs
Length distribution of all Mono-nucleotide repeats
---------------------------------------------------------------------------------------------------------
repeat-length 20-29 30-39 40-49 50-59 60-69 70-79 80-89 90-99 100-and-more
no. of repeats 338 13 0 0 0 0 0 0 0
---------------------------------------------------------------------------------------------------------
Number of repeats
----------------------------------------------------------------------------------------
Sequence A T G C
----------------------------------------------------------------------------------------
lcl|chr_III 12114540 bp 156 131 20 44
----------------------------------------------------------------------------------------
Total 12114540 bp 156 131 20 44
----------------------------------------------------------------------------------------
Repeats >= 40 bp Total> 0 0 0 0 0
----------------------------------------------------------------------------------------
© Division of Biochemical Sciences, National Chemical Laboratory, Pune 411008, INDIA