Mono-Nucleotide Repeats in Genomic Sequences
Mono-Nucleotide Repeats in
C. elegans Chromosome-II complete sequence
Genomic Sequence:
lcl|chr_II
Position Repeat-length Repeat
25652 18/20 GGGGGGGGGGGGGGGGGGAA
57480 18/20 TTTTTTTTTATTTTTTGTTT
126466 18/20 TTTTTTTTTGGTTTTTTTTT
157063 19/21 AAAAAATTAAAAAAAAAAAAA
348992 19/21 TTTTTTTGTTTTTTTTTTGTT
353613 20/22 TTTTTTGTTTTTTTGTTTTTTT
377695 21/23 AAAAAAACAAAAAAAAAGAAAAA
388055 19/21 AAAAAAAAAAAAAAAAAAGTA
399990 18/20 TTTTTTAATTTTTTTTTTTT
458096 18/20 AAAAAAAAAAATCAAAAAAA
485323 36/40 AAAAAAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAATT
495772 20/22 CCCCCCCCCCCCCCCCCCCCTG
511706 19/21 TTTTTTTTTTTTTTGATTTTT
573553 18/20 AAAAAAATAAAAAAATAAAA
591757 19/21 AAAAAAAATAAAAAATAAAAA
623900 18/20 TTTTTTGTTTTTTGTTTTTT
633042 19/21 TTTTTTTTCGTTTTTTTTTTT
675865 20/22 AAAAAAAAAAAAGAAACAAAAA
680876 20/22 GGGGGGGGGGGGGGGGGGGGAT
745027 18/20 AAAAAGAAAAAAAAACAAAA
746278 18/20 GGGGGGGGGGGGGGGGGGCT
757720 19/21 TTTTTTGTTTTGTTTTTTTTT
916229 20/22 AAAAAAAAAAAATTAAAAAAAA
1062318 18/20 AAAAAAAAATAAATAAAAAA
1075053 22/24 CCCCCCCCCCCCCCCCCCCCCCAT
1128724 21/23 CCCCCCCCCCCCCCCCCCCCACA
1167201 19/21 CCCCCCCCCCCCCCCCCCTCT
1171848 20/22 AAAAAAAAAAATCAAAAAAAAA
1180985 21/23 CCCCCCCCCCCCCCCCCCCCTCT
1288397 23/25 TTTTTTTTTTTTTTTCTATTTTTTT
1300102 22/24 AAAAAAATTAAAAAAAAAAAAAAA
1314801 20/22 TTTTTTTTCTTTTTTTTTTTTG
1317533 19/21 AAAAAAAAAAAAAGAAAAAAG
1318818 22/24 GGGGGGGGGGGGGGGGTGGGGAGG
1321307 20/22 GGGGGGGGGGGGGGGGGGTGTG
1331085 19/21 AAAAAAAAAAAAAAGCAAAAA
1344954 19/21 TTTTTTTTTAATTTTTTTTTT
1364729 18/20 AAAAAAAAAATACAAAAAAA
1375813 19/21 TTTTTCTTTTTCTTTTTTTTT
1429021 19/21 GGGGGGGGGGGGGGGGGGGAA
1434481 21/23 TTTTTTGTTTTTTTTTTGTTTTT
1458619 18/20 TTTTTTTTTTTGATTTTTTT
1618143 18/20 TTTTTTTATTTTTATTTTTT
1642742 22/24 TTTTTTTTTTTTTTTTTTTTTTAA
1650976 18/20 TTTTTCTTTCTTTTTTTTTT
1755678 18/20 GGGGGGGGGGGGGGGGGGAA
1834744 23/25 TTTTTTTTTGTTTTTTTGTTTTTTT
1834806 18/20 TTTTTTGTTTTTTGTTTTTT
1834883 18/20 TTTTTTGTTTTTTGTTTTTT
2006736 20/22 TTTTTTTTATTTTTTTTATTTT
2013391 20/22 TTTTTTTTTTGTTTTTTTTTTC
2160960 18/20 TTTTTTTGTTTTGTTTTTTT
2254935 18/20 TTTTTTTTTGTTTTTTTTTC
2283527 19/21 AAAAAAAGAAAAAAGAAAAAA
2381319 18/20 TTTTTTTTCCTTTTTTTTTT
2420860 18/20 CCCCCCCCCCCCCCCCCCAA
2428563 18/20 CCCCCCCCCCCCCCCCCTCG
2500144 18/20 GGGGGGGGGGGGGGGGGGAA
2516537 22/24 TTTTTTTTTTTTTTTTTCTTTGTT
2616961 23/25 AAAAAAAAAAAACAAAAAAAAAAAT
2639729 19/21 AAAAAAAGAAAAAAAAAGAAA
2668879 19/21 TTTTTTTTTGTTTTTTTTTTG
2670315 18/20 GGGGGGGGGGGGGGGTGGGA
2682936 18/20 AAAAAAAACAAAAGAAAAAA
2699032 22/24 AAAAAAAAAAAGAAACAAAAAAAA
2709204 18/20 CCCCCCCCCCCCCCCCCCTA
2712172 20/22 GGGGGGGGGGGGGGGTGGGGGT
2749412 18/20 AAAAAAAAAACAAAAAAAAT
2782551 18/20 AAAAAAAAAACAAAAAAAAC
2782954 18/20 TTTTTTGTTTTATTTTTTTT
2784420 18/20 AAAAATCAAAAAAAAAAAAA
2794020 20/22 TTTTTTTTTTTTTTTTTTAATT
2794295 20/22 TTTTTTTTTTTTTTTTAATTTT
2862814 18/20 AAAAAAAAAGAAAAAAAAGA
2864765 20/22 AAAAAAAAAGAAAAAAAAACAA
2874236 18/20 CCCCCCCCCCCCCCCCCCAG
2898312 22/24 AAAAAAAAGCAAAAAAAAAAAAAA
2900039 20/22 CCCCCCCCCCCCCCCCTCCTCC
2900681 18/20 TTTTTTTTTTTTAATTTTTT
2910237 18/20 AAAAAAACAAAAAAAAAGAA
2911356 20/22 AAAAAAATAAAAAAATAAAAAA
2978818 19/21 AAAAAAAAAACAAAAAAAAAT
3103204 21/23 CCCCCCCCCCCCCCCCCCCCCAG
3168250 18/20 AAAAAATGAAAAAAAAAAAA
3184361 20/22 TTTTTTTTTTTTGGTTTTTTTT
3230874 18/20 TTTTTTTTTAATTTTTTTTT
3255273 25/27 TTTTTTTTTTTTTGGTTTTTTTTTTTT
3295885 18/20 GGGGGGGGGGGGGGGGGGAA
3303951 18/20 AAAAAAACAAAAAAAAAAAG
3363925 21/23 TTTTTTTTTTTTTTTTTTAATTT
3373296 25/27 TTTTTTTTTTTTTTTTTTTTTTTTAAT
3382640 24/26 AAAAAAAATTAAAAAAAAAAAAAAAA
3399921 25/27 TTTTTTTTTTTTTGGTTTTTTTTTTTT
3450168 18/20 AAAAAAATAGAAAAAAAAAA
3459681 18/20 TTTTTTTTTTATATTTTTTT
3467801 19/21 AAAAAAAAATAACAAAAAAAA
3674012 18/20 AAAAAAAAAAAACAAAAAAT
3678032 18/20 AAAAAAAAAAAACAAAAAAT
3737812 18/20 AAAAAAAATTAAAAAAAAAA
3839578 19/21 AAAAAAAAATGAAAAAAAAAA
3890916 18/20 AAAAAAAAAAAAAACACAAA
3904415 18/20 CCCCCCCCCCCCCCCCCCAA
3914416 18/20 AAAAAAAAAAAAAAAAAGCA
3939043 18/20 CCCCCCCCCCCCCCCCCACT
4026063 21/23 TTTTTTTTGTTTTTTTTTTGTTT
4158502 18/20 AAAAAATAAAAATAAAAAAA
4177265 18/20 TTTTTTCTTCTTTTTTTTTT
4181656 19/21 AAAAAAAAACAAAAAAAAAAC
4191918 18/20 TTTTTGTTTTTTTTTTTTTG
4201920 19/21 GGGGGGGGGGGGGGGGGAGGT
4204527 29/32 AAAAAAAAAAAAAAAAAAAAAAAAAAAACCAG
4210892 22/24 TTTTTTTTTTTTTTGGTTTTTTTT
4220341 19/21 TTTTTTTTTGTTTTTTTTTCT
4257966 18/20 AAAAAAAAAAAACGAAAAAA
4309965 22/24 GGGGGGGGGGGGGGGAGGGGGGGT
4310408 18/20 TTTTTTTTGGTTTTTTTTTT
4332165 20/22 GGGGGGGGGGGGGGGGGGGGCC
4333076 19/21 AAAAAAAAAAAAAATTAAAAA
4339630 18/20 AAAAAAAAAACAATAAAAAA
4376775 21/23 GGGGGGGGGGGGGGGGGGGGGTA
4394696 19/21 AAAAAAAAAAACAAAAAACAA
4410535 18/20 TTTTTTGTTTTGTTTTTTTT
4482810 18/20 TTTTTTTTTTGTTTTTTTCT
4501584 19/21 TTTTTTTTTTCATTTTTTTTT
4503322 18/20 AAAAAAAAAACAAAACAAAA
4507978 18/20 AAAAATAAAAATAAAAAAAA
4512029 21/23 CCCCCCCCCCCCCCCCCCCCATC
4530544 18/20 AAAAAAAAAAAAATGAAAAA
4619359 20/22 CCCCCCCCCCCCCCCCCCCCTT
4620722 24/26 CCCCCCCCCCCCCCCCCCCCCCGCCT
4803520 22/24 TTTTTGTTTTTGTTTTTTTTTTTT
4916339 21/23 CCCCCCCCCCCCCCCCCCCCCGA
4954038 18/20 AAAAAAAAAAAAAAAAAACT
4975342 18/20 CCCCCCCCCCCCCCCCCATC
4977497 20/22 AAAAAAAAAAATGAAAAAAAAA
5094867 25/27 AAAAAAAAAAAAATAAAAAATAAAAAA
5273464 21/23 TTTTTTATTTTTTTTTATTTTTT
5485813 19/21 TTTTTGTTTTTTTTTTGTTTT
5611905 18/20 AAAAAACAAAAAAAAAGAAA
5818176 18/20 AAAAAAAAAACAAAAAAAAC
5834123 19/21 CCCCCCCCCCCCCCCCCCCAT
5877202 18/20 AAAAAAAAATAAAACAAAAA
5922246 18/20 TTTTTTTTCTATTTTTTTTT
6012660 18/20 TTTTTTTTTTCTTTTTTTTA
6045452 18/20 AAAAAAGAAAAAGAAAAAAA
6164760 19/21 TTTTTTATTTTTTTTATTTTT
6180081 18/20 TTTTTTTATTTTTTTTTTGT
6231041 19/21 AAAAAAAAAATAAAAAAAAAT
6243337 18/20 AAAAAAAAGAAGAAAAAAAA
6269746 26/28 TTTTTTTTTTTTTTTTTTTTTTTTTTGA
6306460 27/30 TTTTTTTTTTTTTTTTTTTTTTGATTTTTC
6324587 21/23 AAAAAAAAAAAAAAAAAATCAAA
6486403 19/21 AAAAAAAAAAACAAAAAAAAT
6489661 19/21 TTTTTTTTGTTTTTTTTTGTT
6690191 18/20 TTTTTTATTTTTTTATTTTT
6779538 19/21 TTTTTTTTTTCTTTTTTTTCT
7046030 19/21 AAAAAAAAAAAGAAAGAAAAA
7057979 22/24 AAAAAAAAAATTAAAAAAAAAAAA
7100627 18/20 TTTTTTTTTTCATTTTTTTT
7112746 20/22 AAAAAAAAACAAAAGAAAAAAA
7160319 20/22 GGGGGGGGGGGGGGGGGGTGAG
7226824 19/21 CCCCCCCCCCCCCCCCCCCAT
7379724 18/20 AAAAAAAAAACAAAAAAACA
7387726 19/21 TTTTTTTGTTTTTTTTTTGTT
7701801 18/20 AAAAAAAACAAAAAAAAAAT
7852957 18/20 AAAAAAATAAGAAAAAAAAA
7864051 18/20 GGGGGGGGGGGGGGGGGGCA
7894431 19/21 AAAAAAACGAAAAAAAAAAAA
7965030 18/20 TTTTTTTGTTTATTTTTTTT
8040551 21/23 TTTTTTTTGATTTTTTTTTTTTT
8042848 19/21 AAAAAAAAAGAAAAAAAAAGA
8173636 18/20 CCCCCCCCCCCCCCCCAACC
8243260 18/20 CCCCCCCCCCCCCCCCAACC
8289347 18/20 AAAAAAAATAAAAATAAAAA
8431163 18/20 AAAAAAAATAAAAATAAAAA
8624923 18/20 TTTTTATTTTTTTTTTTTTA
8670251 18/20 TTTTTTCTTTTTTCTTTTTT
8690738 18/20 TTTTTTGTTTTTTTTTTGTT
8706404 18/20 TTTTTTTTATTTTTATTTTT
8792900 19/21 AAAAAAAAAAAAAAAAAAACT
8794001 19/21 TTTTTTTTTTCTTTTTTTTTG
8827950 19/21 AAAAAAAAAAAACAAAACAAA
8840107 18/20 TTTTTTTGTTTTTTTTTTTA
8869876 23/25 AAAAAAAAAAATTAAAAAAAAAAAA
8912198 18/20 AAAAAAACAAGAAAAAAAAA
8929399 18/20 TTTTTTTACTTTTTTTTTTT
9021383 18/20 TTTTTTTTTATTTTGTTTTT
9226126 18/20 GGGGGGGGGGGGGGGAGGGA
9254392 18/20 AAAAAAAAAAAAAAAGAGAA
9287770 19/21 AAAAAAAAAACAAAAAAAAAT
9294100 18/20 TTTTTTCTTCTTTTTTTTTT
9318354 18/20 TTTTTTTTTAATTTTTTTTT
9599913 20/22 AAAAAAAAGAATAAAAAAAAAA
9675104 20/22 AAAAATAAATAAAAAAAAAAAA
9679608 19/21 TTTTTTTTTTGTTTTTTTTTC
9680447 19/21 TTTTTTTTTTTTTCATTTTTT
9763228 20/22 AAAAATAAATAAAAAAAAAAAA
9767732 19/21 TTTTTTTTTTGTTTTTTTTTC
9768571 19/21 TTTTTTTTTTTTTCATTTTTT
9882808 19/21 TTTTTGTTTTTCTTTTTTTTT
9891346 20/22 TTTTTTTCTTTTTTTCTTTTTT
10067560 19/21 TTTTTTTTTTTGTTTTTTTGT
10086909 18/20 AAAAAAACAAAAAAAAAAAC
10368071 18/20 TTTTTTTTTTGTTTTTTTTG
10368303 20/22 TTTTTTTGTTTTTTGTTTTTTT
10368363 18/20 TTTTTTGTTTTTTGTTTTTT
10368405 18/20 TTTTTTGTTTTTTGTTTTTT
10409876 18/20 TTTTTTTCTTTTTTTTTTCT
10415670 18/20 TTTTTTTTTTTTTTTTTTGA
10517567 26/28 AAAAAAAAAAAAAAAAAAAAAAAAAGGA
10521317 19/21 TTTTTTTTTCTTTTTTTTGTT
10573395 20/22 TTTTTTTTTTGTTTTTTTTTTG
10758960 22/24 GGGGGGGGGGGGGGGGGGGGGGCA
10837515 18/20 TTTTTATTTTTTATTTTTTT
10937130 22/24 TTTTTTTTTGTTTTTTTTTTTCTT
10951411 19/21 AAAAAAAAAAGAAAAAGAAAA
11007046 19/21 CCCCCCCCCCCCCCCCCCATC
11028972 20/22 TTTTTGTTTTTTTTTTTTTTTG
11036939 19/21 TTTTTTTTTTTTTGCTTTTTT
11128551 18/20 TTTTTTTCTTCTTTTTTTTT
11137585 18/20 TTTTTTTGTGTTTTTTTTTT
11168413 18/20 GGGGGGGGGGGGGGGCGGGT
11263543 18/20 AAAAAAAACGAAAAAAAAAA
11263719 18/20 AAAAAAACCAAAAAAAAAAA
11268246 22/24 TTTTTTTTCTTTTTCTTTTTTTTT
11279022 18/20 TTTTTTTTTTCGTTTTTTTT
11281948 18/20 TTTTTTTCTTTTTTTTTTTG
11283479 19/21 AAAAAAAAAACAAAAAAAAAC
11359999 23/25 GGGGGGGGGGGGGGGGGGGGGGGTT
11361146 20/22 AAAAAAAAGAATAAAAAAAAAA
11380153 22/24 TTTTTTTGTTTTTTTTTTTTTTTA
11401674 18/20 AAAAAAAACGAAAAAAAAAA
11401850 18/20 AAAAAAACCAAAAAAAAAAA
11406377 22/24 TTTTTTTTCTTTTTCTTTTTTTTT
11417153 18/20 TTTTTTTTTTCGTTTTTTTT
11420079 18/20 TTTTTTTCTTTTTTTTTTTG
11421610 19/21 AAAAAAAAAACAAAAAAAAAC
11510679 22/24 TTTTTTTGTTTTTTTTTTTTTTTA
11538622 20/22 AAAAAAAAAAAACCAAAAAAAA
11540806 18/20 AAAAAAAACAAATAAAAAAA
11569539 18/20 CCCCCCCCCCCCCCCCCCAT
11595945 19/21 TTTTTTCCTTTTTTTTTTTTT
11598461 18/20 AAAAAAAAAATAAACAAAAA
11603253 18/20 TTTTTTTTTGCTTTTTTTTT
11677866 18/20 AAAAAAAAAAAAACCAAAAA
11686589 18/20 AAAAATAAAAATAAAAAAAA
11827877 20/22 AAAAAAAACCAAAAAAAAAAAA
11880366 25/27 AAAAAAATAAAAAAAAAATAAAAAAAA
11901759 18/20 TTTTTTTTGTTTTTTTTTTA
11915187 19/21 TTTTTCGTTTTTTTTTTTTTT
11941893 19/21 TTTTTATTTTTATTTTTTTTT
12024137 18/20 AAAAAAAAACAACAAAAAAA
12099943 35/38 TTTTTTTTTTTTTTTTTTTTTTTTCTTTTCTTTTTTTA
12118988 19/21 AAAAAAATTAAAAAAAAAAAA
12175749 23/25 GGGGGGGGGGGGGGGGGGGGGGAGC
12205154 18/20 CCCCCCCCCCCCCCCCCCTA
12205921 24/26 GGGGGGGGGGGGGGGGGGGGGGGCGC
12428534 18/20 TTTTTTTGTTTTTTTTATTT
12437873 19/21 CCCCCCCCCCCCCCCCCCCAA
12480936 18/20 AAAAAACAAAAAAAAAAACA
12488377 20/22 AAAAAAAAAAAAGAAAATAAAA
12494825 18/20 TTTTTTTTTGTTGTTTTTTT
12502690 19/21 CCCCCCCCCCCCCCCCCCCTT
12520646 19/21 AAAAAAAAAAAGAAACAAAAA
12566370 19/21 AAAAAAAATTAAAAAAAAAAA
12603799 18/20 TTTTTTTTTTTCGTTTTTTT
12646625 22/24 GGGGGGGGGGGGGGGGGGGGGCGT
12709055 19/21 TTTTTGTTTCTTTTTTTTTTT
12732125 18/20 TTTTTCTTGTTTTTTTTTTT
12764956 23/25 GGGGGGGGGGGGGGGGGGGGGGGTT
12766103 20/22 AAAAAAAAGAATAAAAAAAAAA
12838134 19/21 AAAAAACCAAAAAAAAAAAAA
12849273 18/20 TTTTTTTTTTTTTAATTTTT
12858283 18/20 TTTTTTGTTTTTTTGTTTTT
12862212 18/20 AAAAAAACAAAAACAAAAAA
12868296 18/20 AAAAAAAAAACAAAAAAAAT
12900576 19/21 GGGGGGGGGGGGGGGGGGTGT
12941022 18/20 TTTTTTGTTTTTTGTTTTTT
12954784 18/20 TTTTTTAATTTTTTTTTTTT
12973107 19/21 GGGGGGGGGGGGGGGGGGTGT
13025248 18/20 AAAAAAAAAACCAAAAAAAA
13030457 19/21 GGGGGGGGGGGGGGGGGGTGT
13089519 21/23 AAAAAAAACAAAACAAAAAAAAA
13096494 18/20 TTTTTTGTTTTTTGTTTTTT
13121366 20/22 TTTTTATTTTTTTTTATTTTTT
13133301 18/20 TTTTTTAATTTTTTTTTTTT
13143053 18/20 AAAAAAAAAACAACAAAAAA
13145385 18/20 CCCCCCCCCCCCCCCCCTGC
13155503 31/34 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTC
13155932 18/20 CCCCCCCCCCCCCCCCCTGC
13171154 18/20 TTTTTTTTGGTTTTTTTTTT
13186918 18/20 AAAAAAAAAAAAAAAAAATT
13220132 21/23 TTTTTTTTTCTTTCTTTTTTTTT
13231706 19/21 TTTTTTTTTTTTTTTTTTAAT
13258615 18/20 TTTTTTTTTGATTTTTTTTT
13260210 21/23 TTTTTTTTTTTTTATTTTTTTTC
13280825 23/25 GGGGGGGGGGGGGGGGGGGGGGGTT
13281972 20/22 AAAAAAAAGAATAAAAAAAAAA
13285221 20/22 TTTTTATTTTTTTTTATTTTTT
13300381 18/20 AAAAAAAAAAGAAAAAAAAC
13422333 24/26 AAAAAAAAAAAAACAAGAAAAAAAAA
13431193 18/20 TTTTTTTTTTTTATTTTTAT
13433023 20/22 TTTTTTTCTTTTTTTTTTTTGT
13434768 19/21 TTTTTTTTTTTTTTTTTAATT
13521995 18/20 TTTTTTTATTTTTTTTTGTT
13533445 19/21 TTTTTTTTTTTTTTTTTTCTA
13537306 20/22 TTTTTTAATTTTTTTTTTTTTT
13558147 20/22 TTTTTATTTTTTTTTATTTTTT
13573309 18/20 AAAAAAAAAAGAAAAAAAAC
13705021 18/20 TTTTTTTATTTTTTTTTGTT
13716473 19/21 TTTTTTTTTTTTTTTTTTCTA
13720333 20/22 TTTTTTAATTTTTTTTTTTTTT
13732097 21/23 TTTTTTTTTCTTTCTTTTTTTTT
13777526 18/20 TTTTTTTTTGATTTTTTTTT
13779121 21/23 TTTTTTTTTTTTTATTTTTTTTC
13788490 21/23 CCCCCCCCCCCCCCCCCCCACTC
13790372 18/20 AAAAAAAAAAAAAAAAAATT
13818830 18/20 GGGGGGGGGGGGGGGGGAGC
13819514 18/20 AAAAAATGAAAAAAAAAAAA
13820483 18/20 AAAAAATGAAAAAAAAAAAA
13837961 19/21 CCCCCCCCCCCCCCCTCCCTC
13846221 20/22 CCCCCCCCCCCCCACCCCCCTC
13856037 19/21 AAAAAAAAACAAAAAAAAAAC
13857550 19/21 AAAAAAAAAAAAAAAAACCAA
13888849 19/21 TTTTTTTTTTTAATTTTTTTT
13894230 19/21 TTTTTTCTTTCTTTTTTTTTT
13970148 19/21 AAAAAAAACCAAAAAAAAAAA
13976105 19/21 AAAAAAAAAACAGAAAAAAAA
13987758 18/20 AAAAAAAAAGAAAGAAAAAA
13989463 20/22 TTTTTTTTTTATTCTTTTTTTT
13990609 24/26 CCCCCCCCCCCCCCCCCCCCCCCGCA
13992564 19/21 TTTTTTTTTTTTTTTTTAATT
14002857 19/21 GGGGGGGGGGGGGGGGGGAAG
14035605 23/25 GGGGGGGGGGGGGGGGGGGGGGGTT
14036752 20/22 AAAAAAAAGAATAAAAAAAAAA
14076565 19/21 AAAAAAAACCAAAAAAAAAAA
14082520 19/21 AAAAAAAAAACAGAAAAAAAA
14094173 18/20 AAAAAAAAAGAAAGAAAAAA
14108921 20/22 CCCCCACCCCCCCCCCCCCCAC
14116642 20/22 CCCCCCCCCCCCCCCCCCCCAT
14150792 23/25 TTTTTTTTTTTTTTTTTAATTTTTT
14162510 18/20 TTTTTTTTTTTTTTAATTTT
14171958 18/20 TTTTTTGTTGTTTTTTTTTT
14191258 21/23 AAAAAAAACAAAACAAAAAAAAA
14214600 19/21 AAAAAAAACCAAAAAAAAAAA
14220555 19/21 AAAAAAAAAACAGAAAAAAAA
14232208 18/20 AAAAAAAAAGAAAGAAAAAA
14246956 20/22 CCCCCACCCCCCCCCCCCCCAC
14254677 20/22 CCCCCCCCCCCCCCCCCCCCAT
14288827 23/25 TTTTTTTTTTTTTTTTTAATTTTTT
14338307 18/20 TTTTTTTTTTTTTTAATTTT
14360035 23/25 TTTTTTTTTTTTTTTTTAATTTTTT
14371738 18/20 TTTTTTTTTTTTTTAATTTT
14381180 18/20 TTTTTTGTTGTTTTTTTTTT
14383063 23/25 AAAAAACAAAAAAAAAAAACAAAAA
14400482 21/23 AAAAAAAACAAAACAAAAAAAAA
14426536 20/22 TTTTTTTTTCTTTTTTTTTTCT
14450578 18/20 TTTTTTTTTTCTTTTTTCTT
14522836 18/20 TTTTTTTTTTTAATTTTTTT
14610312 18/20 AAAAAAAAGAAACAAAAAAA
14631178 18/20 AAAAAAGAAAAAAGAAAAAA
14632737 25/27 AAAAAAAAAAAAATGAAAAAAAAAAAA
14642935 20/22 TTTTTTCTTTTGTTTTTTTTTT
14648905 18/20 AAAAAAAAACGAAAAAAAAA
14648990 18/20 AAAAAAAAATGAAAAAAAAA
14649013 18/20 AAAAAAACGAAAAAAAAAAA
14649057 18/20 AAAAAAAAACGAAAAAAAAA
14649102 18/20 AAAAAAATAAAAAAAAATAA
14668708 18/20 TTTTTTTTTTTTGGTTTTTT
14696747 19/21 TTTTTTTTTTTATTTTTTGTT
14698248 18/20 TTTTTTTTTTTTTTTTTACT
14704019 21/23 AAAAAAAGAAAAAAAAAGAAAAA
14705520 20/22 TTTTTTTTTTTCGTTTTTTTTT
14706240 20/22 TTTTTTTCTTTTTCTTTTTTTT
14754530 19/21 AAAAAAAAAACAAAAAAATAA
14754580 19/21 AAAAAAAAATGAAAAAAAAAA
14755501 19/21 TTTTTTTTTTTTTTTTTTGAT
14756837 19/21 AAAAAAAAATGAAAAAAAAAA
14756860 18/20 AAAAAAAAATGAAAAAAAAA
14756881 19/21 AAAAAAAAAAGAAGAAAAAAA
14756903 20/22 AAAAAAAAAAGAAAAAAAAAGA
14756926 18/20 AAAAAAATGAAAAAAAAAAA
14756948 19/21 AAAAAAAAATGAAAAAAAAAA
14757460 18/20 AAAAAAAAAAGAGAAAAAAA
14757490 19/21 TTTTTTTTTTCCTTTTTTTTT
14757513 26/28 TTTTTTTTTCTTTTTTTTTCTTTTTTTT
14757560 18/20 TTTTTTTTTTCATTTTTTTT
14757601 18/20 TTTTTTTTCATTTTTTTTTT
14758737 21/23 AAAAAAAAAATGAAAAAAAAAAA
14766862 18/20 CCCCCCCCCCCCCCTCCCCT
14777118 23/25 GGGGGGGGGGGGGGGGGGGGGGGTT
14778265 20/22 AAAAAAAAGAATAAAAAAAAAA
14787099 18/20 TTTTTTGTTGTTTTTTTTTT
14806400 21/23 AAAAAAAACAAAACAAAAAAAAA
14832424 18/20 TTTTTTTTTTCTTTTTTCTT
14920173 18/20 TTTTTTTTTTTAATTTTTTT
14954229 18/20 TTTTTTTTTTTAATTTTTTT
15137567 19/21 AAAAAAAAGCAAAAAAAAAAA
15140731 19/21 TTTTTTTTTCTATTTTTTTTT
15141747 20/22 TTTTTTTTTTGATTTTTTTTTT
15145334 18/20 TTTTTTGATTTTTTTTTTTT
15148505 18/20 TTTTTTTTTCATTTTTTTTT
15148882 18/20 TTTTTTTTTCTTTTTTTTCT
15148981 18/20 AAAAAAAAGAAAAAAAAACA
15149011 18/20 AAAAAAAAAGAAAAAAAACA
15149086 19/21 TTTTTTTTTCTGTTTTTTTTT
15149204 20/22 AAAAAAAAAAGAAAAAAAAACA
15149281 18/20 TTTTTTTTTCTTTTTTTTTC
15149588 19/21 AAAAAAAAAAGACAAAAAAAA
15149665 18/20 TTTTTTTTTCTTTTTTTTCT
15149791 19/21 AAAAAAAAAAGACAAAAAAAA
15149868 18/20 TTTTTTTTTCTTTTTTTTCT
15149995 18/20 AAAAAAAAAGAAAAAAAACA
15150070 18/20 TTTTTTTTCTGTTTTTTTTT
15150092 25/27 TTTTTTTTTTTTTTTTTTTTTTCATTT
15150202 19/21 TTTTTTTTTCTTTTTTTTTCT
15150285 19/21 AAAAAAATTAAAAAAAAAAAA
15150360 19/21 AAAAAAAAAGAAAAAAAATAA
15150402 19/21 TTTTTTTTTTCTCTTTTTTTT
15150508 19/21 TTTTTTTTTCTCTTTTTTTTT
15159341 24/26 AAAAAAAAAAAAAAAAAAATTAAAAA
15162921 20/22 TTTTTTTTTTTTTTCTTTTTCT
15167486 18/20 AAAAATTAAAAAAAAAAAAA
15184332 18/20 TTTTTTTTTTTTTAATTTTT
15184581 22/24 AAAAAAAAAAAATCAAAAAAAAAA
15219315 19/21 CCCCCCCCCCCCCCCCCCACG
15243147 18/20 AAAAAAAAATAAAAGAAAAA
15309443 18/20 AAAAAATTAAAAAAAAAAAA
15326457 22/24 AAAAAAAAAGAAAAAAAGAAAAAA
15326492 18/20 AAAAAAAAAAAGAAAAAAAG
15326513 26/28 AAAAAAAAAGAAAAAAAAGAAAAAAAAA
15326724 26/28 AAAAAAAAAGAAAAAAAAAAGAAAAAAA
15326784 25/27 AAAAAAAAAGAAAAAAAAAGAAAAAAA
15326871 21/23 AAAAAAAAGAAAATAAAAAAAAA
15334696 19/21 AAAAAAAAAATAATAAAAAAA
15339138 18/20 AAAAAAAAAAATAAAAAAAG
15351687 19/21 AAAAAAAAGAAAAAAAAAAGA
15353896 19/21 AAAAAATCAAAAAAAAAAAAA
15361176 22/24 TTTTTTTTTTTTTTTTTTTTAGTT
15368460 18/20 AAAAAAAAAAAAAAAAACAT
15389658 18/20 AAAAAATAAAAAAAAATAAA
15398969 21/23 AAAAAAAAAAAATTAAAAAAAAA
15399270 18/20 CCCCCCCCCCCCCCCCCACT
15456748 19/21 AAAAAAAAAAAAGAAAACAAA
15522846 20/22 AAAAATTAAAAAAAAAAAAAAA
15526102 24/26 GGGGGGGGGGGGGGGGGGGGAGCGGG
15568119 23/25 GGGGGGGGGGGGGGGGGGGGGGGTT
15569266 20/22 AAAAAAAAGAATAAAAAAAAAA
15578522 19/21 AAAAAAAAAAAAGAAAACAAA
15601349 20/22 TTTTTTTTTGTTTTTTTTTTCT
15629186 18/20 AAAAAAAAAAAACAAAAAAT
15642216 29/32 CCCCCCCCCCCCCCCCCCCCCCCCCACCACCG
15645254 18/20 CCCCCCCCCCCACCCCCCTC
15670555 18/20 AAAAACTAAAAAAAAAAAAA
15737190 20/22 TTTTTTTTTGTTTTTTTTTTCT
15765026 18/20 AAAAAAAAAAAACAAAAAAT
15778055 29/32 CCCCCCCCCCCCCCCCCCCCCCCCCACCACCG
15781093 18/20 CCCCCCCCCCCACCCCCCTC
15822522 21/23 CCCCCCCCCCCCCCCCCCACCGC
15848493 18/20 AAAAAAAAAACTAAAAAAAA
15871110 20/22 AAAAATTAAAAAAAAAAAAAAA
15874366 24/26 GGGGGGGGGGGGGGGGGGGGAGCGGG
15968662 19/21 CCCCCCCCCCCCCCCCCGCCT
15994600 20/22 TTTTTTTTTCTTTTTTTGTTTT
16005893 18/20 TTTTTTTTTTTTGATTTTTT
16022274 21/23 AAAAAAAAAAAAAATTAAAAAAA
16032496 19/21 TTTTTTTTGTGTTTTTTTTTT
16049639 25/27 AAAAAAAAAAAAAAAAAGAAAAAGAAA
16051499 19/21 AAAAAAAAACAAAAAAAAACA
16068767 19/21 AAAAAAAAATTAAAAAAAAAA
16109338 18/20 TTTTTCTTTCTTTTTTTTTT
16110138 20/22 TTTTTTTGTTTTTTTTTGTTTT
16153598 18/20 CCCCCCCCCCCCCCCCTCCG
16206751 18/20 CCCCCCCCCCCCCCCCCCTA
16219990 18/20 AAAAAACCAAAAAAAAAAAA
16287858 22/24 TTTTTCGTTTTTTTTTTTTTTTTT
16291925 18/20 TTTTTTTTGTTTTGTTTTTT
16293969 19/21 AAAAAAACAAAAAAAAATAAA
16368776 18/20 CCCCCCCCCCCCCCCCTCCG
16389186 19/21 AAAAATAAGAAAAAAAAAAAA
16401008 22/24 AAAAAAAAAAAAAAAAAGAATAAA
16409324 18/20 AAAAAACAAAAAACAAAAAA
16437718 21/23 GGGGGGGGGGGGGGGGAGGTGGG
16548664 19/21 AAAAAAAAAAAAAATTAAAAA
16556419 18/20 AAAAAAAAATAAAAAATAAA
16595294 18/20 TTTTTTTTTCTTTTTTTTTC
16647215 21/23 TTTTTTTTTTTTTTCTATTTTTT
16658840 22/24 TTTTTTTTTGTTTTTTTTTTTATT
16669603 21/23 TTTTTTTGTTTTTCTTTTTTTTT
16674521 18/20 AAAAAAAAAAAGAGAAAAAA
16730173 20/22 TTTTTGTTTTTTTTTATTTTTT
16739530 19/21 TTTTTTTGTTTTTTTTTTTTG
16739590 19/21 TTTTTTTTTGTTTTTTTTTGT
16743574 18/20 AAAAAAAAAAAATCAAAAAA
16748080 18/20 TTTTTTGATTTTTTTTTTTT
16753942 18/20 TTTTTTTTTGTTTTTTTTGT
16755561 19/21 AAAAAAAAACAAAAAAAAACA
16768889 20/22 GGGGGGGGGGGGGGGGGGGGTC
16781246 21/23 TTTTTTTTTTTTATTTTTTTTTC
16795207 20/22 AAAAAAAATCAAAAAAAAAAAA
16797078 20/22 AAAAAAAAAAAAAAAAAAAACG
16808747 22/24 AAAAAAAAAAAAAAAAACGAAAAA
16871900 19/21 AAAAAAAAAAAAAATTAAAAA
16879657 18/20 AAAAAAAAATAAAAAATAAA
16926267 18/20 AAAAAAAAAGAAAAAAAAAT
17001284 18/20 AAAAAAAAAAAGAGAAAAAA
----------------------------------------------------------------------------
Total sequence length......................... 17004925
Total number of repeats detected.............. 506
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 210 204 38 47
30 to 39 1 2 1 2
40 to 49 1 0 0 0
50 to 59 0 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 212 206 39 49
----------------------------------------------------------------------------
Mono-Nucleotide Repeats in C. elegans Chromosome-II complete sequence
Minimum repeat length = 20 (allowing maximum 10% mismatch)
Total 1 sequences searched with 17004925 base pairs
Total 506 repeats covering 9874 / 10894 base pairs
Length distribution of all Mono-nucleotide repeats
---------------------------------------------------------------------------------------------------------
repeat-length 20-29 30-39 40-49 50-59 60-69 70-79 80-89 90-99 100-and-more
no. of repeats 499 6 1 0 0 0 0 0 0
---------------------------------------------------------------------------------------------------------
Number of repeats
----------------------------------------------------------------------------------------
Sequence A T G C
----------------------------------------------------------------------------------------
lcl|chr_II 17004925 bp 212 206 39 49
----------------------------------------------------------------------------------------
Total 17004925 bp 212 206 39 49
----------------------------------------------------------------------------------------
Repeats >= 40 bp Total> 1 1 0 0 0
----------------------------------------------------------------------------------------
© Division of Biochemical Sciences, National Chemical Laboratory, Pune 411008, INDIA