Di-Nucleotide Repeats in Genomic Sequences
Di-Nucleotide Repeats in
C. elegans Chromosome-I complete sequence
Genomic Sequence:..
lcl|worm_chr_I
Position Repeat Coverage Repeat
46118 TA * 13 25/26 TA TA TA TA TA TA TA TA TA TA TA TC TA
99263 TA * 10 18/20 TA CA TA TA TA AA TA TA TA TA
102341 CA * 11 21/22 CA CA CA CA CA CA CA CA CA CG CA
110717 GA * 11 20/22 GA TG GA GA GA GA GA GA GA GA GA
368539 CA * 11 20/22 CA CA CA CA CA CA CA CA CA CA TC
433433 TA * 43 78/86 TA TA TA TA TG GA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TG TA TA TA TA TA CA TG TA TA TA TA TA TA TA TA TA CA GT
435852 TA * 23 42/46 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA CA TT TG AA
448039 AG * 51 92/102 AG AA CG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG GG AT AT TG GT GA
555700 AT * 10 18/20 AT AC AT AT AT AT AT GT AT AT
569114 GA * 10 18/20 GA AA GA GA GA GA GA GG GA GA
569162 CT * 12 22/24 CT CT CT CT CT CT CT CT CT CT CT TC
580877 AC * 11 20/22 AC AC AC AC AC AC AC AC AC TC AA
582261 GA * 10 18/20 GA AA AA GA GA GA GA GA GA GA
590963 TG * 10 18/20 TG TG TG TC TG TG TG TG TA TG
592601 TC * 10 18/20 TC TC TC CC TC TC CC TC TC TC
594182 CA * 12 22/24 CA CA CA CA CA CA CA CA AA TA CA CA
599193 AG * 11 20/22 AG AA CG AG AG AG AG AG AG AG AG
599251 AC * 11 20/22 AC AC AC AC AC AC AC AT AC AC AA
603190 AG * 15 27/30 AG AG AG AG AG AG AG AG AG AG AG AA AG AG GA
603321 CT * 10 18/20 CT CT CT CT CT CT TT TT CT CT
604758 GT * 10 18/20 GT GT AT GT GT GT GT GT GT CT
604911 AC * 10 18/20 AC AC AC AC AC AC AT AC AC AT
605186 GA * 10 18/20 GA GA GA GA GA GA GA GC GA GG
611454 GA * 10 18/20 GA GA GG GA GG GA GA GA GA GA
613892 TG * 12 22/24 TG TG TG TG AG TG TG TG TG TG TG AG
619750 TC * 33 60/66 TC CG TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TT CT CC TC TC
620062 AT * 10 18/20 AT AA AT AT AT AT AT AT AT AG
621120 AC * 16 29/32 AC AC AC AC AC AC AC AC AC AC AC AC AC AC TC GT
666578 TA * 12 22/24 TA TA TA TA TA TA TA TA TA TA AG TA
666680 TA * 19 35/38 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TG TA AA CA
667006 TG * 16 29/32 TG TG TA TG TG TG TG TG TG TG TG TG TG TG TG CT
672809 TG * 11 20/22 TG TG TG TG TG TG TG TG TG TG CA
722517 GT * 12 22/24 GT GT GT AT GT GT GT GT GT GT GT GC
762041 GA * 11 20/22 GA GA GA GA GA GA GA GT GA GT GA
762919 AC * 10 19/20 AC AC AT AC AC AC AC AC AC AC
763627 AG * 21 38/42 AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AA AA GA
763724 TG * 10 19/20 TG TG TA TG TG TG TG TG TG TG
767900 TG * 15 28/30 TG TG TG TG CG TT TG TG TG TG TG TG TG TG TG
768023 CT * 11 21/22 CT CT CT CT CT CT CT CT CT CT CC
783505 TG * 13 24/26 TG TG TG TG TG TG TG TG TG TG TG TG CA
789734 GT * 10 18/20 GT GT AT GT TT GT GT GT GT GT
883030 AC * 11 20/22 AC AC AC AC AC AC AC AT AC AC GC
901835 CA * 10 19/20 CA CA CA CA CA CA CA CA CA CT
939144 CT * 27 49/54 CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CC AT CT TT CT CC GT
1010376 AC * 12 22/24 AC GC AC AC AC AC AC AC AC AC AC AG
1043214 GA * 16 30/32 GA CA GA AA GA GA GA GA GA GA GA GA GA GA GA GA
1043387 GA * 12 22/24 GA GA GA GA GA CA GA CA GA GA GA GA
1043496 AG * 13 24/26 AG TG AG AG AG AG AG AG AG AG AG AG AT
1047165 AC * 10 18/20 AC AC AC AC AT AC AC AC AG AC
1047780 AC * 10 18/20 AC AC AC AC TC AC AC AC AC AT
1048011 AC * 11 20/22 AC AC AC AC AC AC AC AC AC AC TT
1199398 GA * 12 22/24 GA AA GA GA GA GA GA GA GA AA GA GA
1202132 TA * 10 18/20 TA AA TA TA GA TA TA TA TA TA
1407290 TC * 10 18/20 TC TT CC TC TC TC TC TC TC TC
1458154 CT * 10 19/20 CT CT CT CT TT CT CT CT CT CT
1473100 GA * 10 18/20 GA GA AA GA TA GA GA GA GA GA
1477701 CA * 40 72/80 CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CT TA CT TC CG TC
1691444 AT * 11 21/22 AT AT AT AT AT AT AT AT AT CT AT
1692716 AG * 33 60/66 AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG TG AG GA GC AG AG AT
1722454 AT * 12 22/24 AT AT AT AT AT AT AT AT AT AC AT TT
1752844 TA * 12 22/24 TA TA TA TA TA TA TA TA TA TA GA TT
1807028 AG * 10 18/20 AG AG AG AG AG AG AG AG AA GG
1821684 AT * 10 18/20 AT AT AT AC AT AT AT AT GT AT
1831612 AT * 16 29/32 AT AT AT AT AT AT AT AT AT AT AT AT AT AT GT TA
1857988 AG * 11 20/22 AG AG AG AC AG AG AG AC AG AG AG
1859902 AG * 10 18/20 AG AG AG AG AG AG GA AG AG AG
1861442 AG * 10 18/20 AG AG AG AG AG AG AG AG AC GG
1899968 GA * 11 20/22 GA GA GA GA GA GA GA GT GA AA GA
2009458 AG * 10 18/20 AG AG AA AG AA AG AG AG AG AG
2023446 TA * 14 26/28 TA TA TA TA TA TA TT TA TA TA TA TT TA TA
2071221 CT * 23 42/46 CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT TC GC
2071635 AG * 17 32/34 AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AA AA
2074502 AG * 12 22/24 AG AG AG TG AG AG AG AG AG AG AG GG
2082936 GA * 10 18/20 GA GA GA GA GA GA GA GA GA AG
2086039 CA * 10 18/20 CA CT CA TA CA CA CA CA CA CA
2120319 AC * 11 20/22 AC AC AC AC AC AC AC AC AC GC AG
2277986 CA * 10 18/20 CA CA CA CA CT CA CA CA CA CG
2363156 GA * 20 36/40 GA GA GA GA GA GA GA GA GA GA GA GA GG GA GA GA GA AA CA TA
2366174 AG * 14 26/28 AG AG AG AG AG AG AG GG AG AG AG AG AG AT
2366977 TC * 11 20/22 TC GC TG TC TC TC TC TC TC TC TC
2372937 TG * 15 27/30 TG TT TG TT TG TG TG TG TG TG TG TG TG TG TA
2374186 CA * 10 18/20 CA CA TA CA TA CA CA CA CA CA
2379273 GA * 10 18/20 GA GA GA GA GA GA GA GA GA AC
2380824 AG * 11 20/22 AG AG TG AG TG AG AG AG AG AG AG
2396767 TG * 10 18/20 TG TG TG TG TG TA TG TA TG TG
2434372 GA * 11 20/22 GA GA GA GA GA GA GA AA GA GA AA
2460549 AG * 10 18/20 AG AG AG AG AG AG AG AG TG AC
2561337 TC * 10 18/20 TC TT TC TC TC AC TC TC TC TC
2561907 CA * 10 18/20 CA CA AA CA CA CA CA CA TA CA
2563354 TA * 12 22/24 TA CC TA TA TA TA TA TA TA TA TA TA
2592087 CT * 10 18/20 CT CT CT TT CT CT CT CT CT CC
2666786 TC * 13 24/26 TC TC TA TC TC TC TC TC TC TC TC TC TG
2774646 TC * 11 20/22 TC TC TC TC TC TC TC TC TC TT CC
2787384 TC * 17 32/34 TC TC TC TC TC TC TC TC TC TC TC TC TC TC AC TA TC
2788024 CA * 16 29/32 CA CA CA CA CA CA CA CA CA CA CA AA CA CG TA CA
2820179 TG * 14 26/28 TG TG TG TG TG TG TG TG TG TG TG TG TG AT
2827015 GA * 81 147/162 GA AA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA TG GA GG AA GG GA GA GA GA CC CC GT TT TC
2830435 AG * 13 24/26 AG AG AG AG AG AG AG AG GG AG AG AG AT
2831720 TC * 10 18/20 TC TC TT TC TC TC TC TC TT TC
2831813 TG * 11 20/22 TG TG TG TG TG TG TG AG TA TG TG
2833846 GT * 12 22/24 GT GT GT GT TT GT GT GT GT GT GT GC
2842120 TC * 10 18/20 TC TC TC TC TC TC TT TC TC TT
2846845 AG * 11 20/22 AG TG TG AG AG AG AG AG AG AG AG
2978747 TG * 11 20/22 TG TG TG TG TG TG TG TG TG TG GA
2989374 AG * 10 18/20 AG AG AG AA AG AG AG AG AA AG
2990421 AG * 12 22/24 AG AG AG AG AT AT AG AG AG AG AG AG
3026177 GT * 10 18/20 GT GA GT GT AT GT GT GT GT GT
3028286 GA * 16 29/32 GA GA GA GA GA GA GA GA GG GA GA GA GA GA GC GT
3028489 GT * 10 18/20 GT GT GT AT GT GT GT GT GT TT
3189098 GA * 16 30/32 GA GA AA GA GA GA GA GA GA GA GA GA GA GA AA GA
3202926 TG * 12 22/24 TG TT GG TG TG TG TG TG TG TG TG TG
3202965 CA * 10 18/20 CA CA CA CA CA TA CA CA TA CA
3236024 TG * 24 44/48 TG TG TG TG AG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TC TG TC AG
3242402 AC * 12 23/24 AC AC AA AC AC AC AC AC AC AC AC AC
3268354 TC * 12 22/24 TC TC TC TC TC TC TC TC TT TC AC TC
3299484 AT * 13 24/26 AT AT AT AT AT AT AT GT AT AT AT AT AA
3323682 TC * 10 18/20 TC TT TC TC TC TC TC TC TC TG
3625625 AT * 14 26/28 AT AT AA AA AT AT AT AT AT AT AT AT AT AT
3643102 TC * 10 18/20 TC TC CA TC TC TC TC TC TC TC
3687773 TC * 12 22/24 TC TC TT TT TC TC TC TC TC TC TC TC
3796508 TA * 43 79/86 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TT CA TT CA CC AA
3874196 GA * 11 20/22 GA GG AA GA GA GA GA GA GA GA GA
3874892 CT * 10 18/20 CT CT CT CT TC CT CT CT CT CT
3900158 TA * 10 18/20 TA CC TA TA TA TA TA TA TA TA
3923625 CT * 10 18/20 CT CT CT GT CT CT TT CT CT CT
3974211 CT * 11 20/22 CT CT CT CT CT CT CT CT CT CT TG
4024422 TG * 10 18/20 TG TG TG TG TG TG TT TG TG TC
4119032 TC * 42 76/84 TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TA AC TT TT TT TT CG
4123165 TC * 16 30/32 TC CC TC TC TC TC TC TC TC TC TC TC TC TC TC TT
4184257 TC * 10 18/20 TC TC TC TC TC TC TC TC AC CC
4342598 CA * 10 18/20 CA CA CT CA CA CA TA CA CA CA
4415858 GA * 11 20/22 GA GA GA GA AA GA GA GA AA GA GA
4419565 AG * 11 20/22 AG TG AG AG AG AG AG AG GG AG AG
4496769 AG * 13 24/26 AG AG AG AG AG AG AG AG AG AG AT AG AT
4512721 TA * 12 22/24 TA TA TA TA TA TA TA TA TG TA TA AA
4517663 TG * 10 18/20 TG TG TG TG TA TG TG TG TG TT
4579232 GA * 10 18/20 GA GA TG GA GA GA GA GA GA GA
4603404 TC * 11 21/22 TC TC TC TC TC TC TC TG TC TC TC
4687016 AC * 11 21/22 AC AC AC AC AC AC AC AC AC AC AT
4759022 AC * 11 20/22 AC AC AC AC TC AC AC TC AC AC AC
4879220 AT * 11 21/22 AT AT AT AT AT AT AT AT AT AT AA
4938051 AT * 18 34/36 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT TT TT
4952153 AG * 10 19/20 AG AG AG GG AG AG AG AG AG AG
4952959 AC * 10 18/20 AC AC AC AC AC AT AC AT AC AC
5014928 TA * 12 23/24 TA TA TA TA TA TA TA TA TA TA TT TA
5056854 CA * 10 19/20 CA CA CA CA CA CA CA CA CC CA
5103499 AT * 10 18/20 AT AT AT AT AT AT AT AC AA AT
5145773 TC * 11 21/22 TC TC TC TC TC TC TC TC TC TC TG
5165847 TC * 10 18/20 TC TC AG TC TC TC TC TC TC TC
5167630 AG * 15 27/30 AG AT AG AG AG AG AG AG AG AG AG AG TG AG AT
5172227 TA * 10 18/20 TA TT TA TA TA TA TA TA TA AA
5204555 AT * 42 77/84 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AG AT CC AA AT TG AC
5214376 TA * 11 20/22 TA TA TG TA TA TA TA TA TA TT TA
5370653 CA * 11 20/22 CA CA CA CA CA CA CA CA CA CA TT
5374208 GA * 10 18/20 GA GA GA GA GA GA GA GA AA GG
5407820 AT * 15 28/30 AT AT AT AT AT AT AT AT AT AT AT AT AT AT TG
5681888 TA * 13 24/26 TA TA TA TA TA TA TA TA TA TA TT TT TA
5686759 TC * 11 20/22 TC AC TT TC TC TC TC TC TC TC TC
5728176 TG * 12 22/24 TG TG TG TG TG TG TG CG TG TG TG AG
5821101 AG * 11 20/22 AG AG AG AG AG AG AG AG AA AG AT
5867217 TC * 10 18/20 TC TT TT TC TC TC TC TC TC TC
5880798 GA * 10 18/20 GA GA AA GA GA GG GA GA GA GA
5881394 GA * 10 18/20 GA GA AA GA GA GG GA GA GA GA
5887658 CA * 17 31/34 CA CA CA CA CA CA CA CA CA CC CT CA CA CA CA CA AA
5892417 CA * 20 36/40 CA CT CA CA CA CA CA CA CA CA CA CA CA CA AA CA CA CA CA AC
5894439 TG * 17 31/34 TG TG TG TG TG TG TG TG TT TG TG TG TG TG TG AG CG
6190342 AT * 38 69/76 AT AT AT AG AT AC AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AA TT TC AG
6233942 TA * 26 47/52 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TG TG CA TT TT
6242115 AT * 15 27/30 AT AT AA AT AT AT AT AT AT AT AT AT AT AT TA
6257379 CA * 10 19/20 CA CA CA CA CA CA CA CA CA CC
6300604 GA * 13 24/26 GA GA GA GA GG GA GA GA GA GA GA GA AA
6314707 AG * 38 69/76 AG AC AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AC AA AC AC AT AC
6350006 CT * 10 18/20 CT CT CT CT CT CT CT TT CT CG
6356218 GA * 11 20/22 GA GA AA GA GA GA GA GA GA GA GG
6394889 AT * 11 20/22 AT AT AT AT AT AT AT AT AT AA AA
6476903 AT * 10 19/20 AT AT AT AT GT AT AT AT AT AT
6479471 CT * 10 18/20 CT CT CT CT CC CT CT AT CT CT
6481529 TC * 11 20/22 TC TT GC TC TC TC TC TC TC TC TC
6506276 TA * 41 74/82 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TG TT TT TT TA AT CT
6519696 TG * 12 22/24 TG TG TG TC TG TG TG TA TG TG TG TG
6550436 TC * 13 24/26 TC TC TC TC TC TC TC TC TC TT TC TC TT
6571634 AT * 34 62/68 AT AT AT AT AA AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT TT TC TG
6597200 AT * 13 24/26 AT GT AT AT AT AT AT AT AT AT AT AT AG
6605901 GA * 12 22/24 GA GA GA GA GA GA GA GA GA GA GA AT
6623916 AG * 11 20/22 AG AG AG AT AG AG AG AG AG AA AG
6631523 TC * 13 25/26 TC TC TC TC TC TC TC TC TC TC TC TC TA
6651156 GA * 12 22/24 GA GA GA GA GA GA GA GA GT GA GG GA
6725178 TC * 10 19/20 TC TA TC TC TC TC TC TC TC TC
6737258 AG * 10 18/20 AG AG AA AA AG AG AG AG AG AG
6746839 TA * 11 21/22 TA TA TA TA TA TA TA TA TA CA TA
6799995 TG * 12 23/24 TG TA TG TG TG TG TG TG TG TG TG TG
6811516 AT * 22 40/44 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AG TT TC
6813837 AT * 12 22/24 AT AT AT AT AT AT AT AT AT GT AT GT
6852812 AG * 11 20/22 AG AA AG AG AG AG AG AG AG AG AT
6904735 AT * 27 50/54 AT GT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT TT TA
7083661 AT * 16 29/32 AT TT AT AT AT AT AT AT AT AT AT AT AT AT AT TC
7088193 CT * 11 20/22 CT AT CT CT CT CT CC CT CT CT CT
7112320 TA * 16 30/32 TA CA TA TA TA TA TA TA TA TA TA TA TA TA TA TG
7130679 TA * 31 56/62 TA TA TA TG TA TA AA TA TA TA TA TA TA TA TA CA TA TA TA TA TA TA TA TA TA TA TA TA TA AT AA
7185035 CT * 10 18/20 CT CT CT CT CA CT CT CT CT TT
7205537 CT * 13 24/26 CT CT CT CT CT CT CT CT CT CT CT TT CA
7247495 GA * 22 41/44 GA AA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GG AA
7282443 AG * 11 20/22 AG AG AG AG AG AG TG AG AG AG AA
7399463 TG * 10 18/20 TG TG TG TG TA TG TA TG TG TG
7413608 TC * 61 110/122 TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TT CT GT AT TT CA CT
7416975 TC * 13 24/26 TC TA TC TC TC TC TC TC TC TC TC TC TT
7435873 AG * 12 22/24 AG AG AG AG AG AG AG AG AG AG AG TC
7529762 TA * 48 88/96 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TT TC AA GC CG GA
7536837 AG * 10 18/20 AG GG AG AG AG AG AG AG AG AA
7589802 CT * 10 18/20 CT CT CT CT CT CT CT CT AT TT
7668240 GT * 13 24/26 GT GT GT GT AT GT CT GT GT GT GT GT GT
7707462 TG *112 202/224 TG TG TG TG AG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG GC AT TG CG GC GC CC GT AA CC TT GG CA
7712302 TC * 10 18/20 TC TC TC TC TC TC TT TC TC AC
7771750 AG * 10 18/20 AG AG AG AG AG AC AG AG AG AT
7821416 TG * 12 23/24 TG CG TG TG TG TG TG TG TG TG TG TG
7836734 AT * 12 22/24 AT AT AT AT AT AT AT AT AT TT AT TT
7865515 AG * 11 20/22 AG AC AG AG AG AG TG AG AG AG AG
7880397 CA * 11 20/22 CA CA CA CA CA CA CA CA TA CA CC
7881633 TG * 11 20/22 TG TA TG TG TG TG TG TG TG TG GG
7920099 GA * 13 24/26 GA GT GA GA AA GA GA GA GA GA GA GA GA
7981488 AT * 12 23/24 AT AA AT AT AT AT AT AT AT AT AT AT
8005809 AT * 35 63/70 AT AT AT AG AT AC AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AA TT TC AG
8077679 CA * 10 18/20 CA CA CA CG CA CA CA TA CA CA
8131288 TC * 95 171/190 TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TA TA AA TC CT TT AC GG TC TT CT AA TC CT TT CC
8270998 GT * 10 18/20 GT GT GT GT CA GT GT GT GT GT
8273921 TC * 11 20/22 TC TC TC CT TC TC TC TC TC TC TC
8277478 TC * 11 20/22 TC AC TC TC AC TC TC TC TC TC TC
8277617 CT * 10 18/20 CT AT CC CT CT CT CT CT CT CT
8335946 AG * 11 20/22 AG AG AG GG AG AG AG AG AG AG TG
8338000 TA * 12 23/24 TA TA TA TA TA TA TA TA TA TA TA GA
8342939 AG * 13 24/26 AG AC AG AG AG AG AC AG AG AG AG AG AG
8366245 GA * 13 24/26 GA GA TA CA GA GA GA GA GA GA GA GA GA
8367325 CA * 10 18/20 CA AA CA CT CA CA CA CA CA CA
8377297 CT * 18 33/36 CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CG AA
8396696 GA * 12 22/24 GA AC GA GA GA GA GA GA GA GA GA GA
8433560 GA * 76 137/152 GA GA TA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA AT CG AA AA AA AA AA AA GA AA AA CC GA
8440172 AG * 13 24/26 AG AG AG AG AG AG AG AG AG AG AC AA AG
8481318 AC * 10 19/20 AC AC AC AC AC AC AC AC CC AC
8579578 CT * 12 23/24 CT TT CT CT CT CT CT CT CT CT CT CT
8594600 TC * 11 21/22 TC TA TC TC TC TC TC TC TC TC TC
8595341 TA * 11 20/22 TA TA TA TA TA TA TA CA TG TA TA
8657144 AT * 17 31/34 AT AT AT GT AT AT AT AT AT AT AT AT AT AT AT AT CA
8682636 TG * 11 20/22 TG TA TG TG TG TT TG TG TG TG TG
8707997 AT * 11 21/22 AT AT AT AT AT AT AT AT AT AT AA
8778820 GA * 10 19/20 GA GA GA GA GA GA GA TA GA GA
8822582 GA * 11 21/22 GA GA GA GA GA GA GA CA GA GA GA
8825301 AT * 13 24/26 AT AT AT AT AT AT AT AT AT AT AT GG AT
8826140 TG * 12 22/24 TG TG TG TG TG TG TG TG TG TG TT TC
8839780 AT * 10 19/20 AT GT AT AT AT AT AT AT AT AT
8886477 GT * 10 18/20 GT GT GT GT CA GT GT GT GT GT
8889400 TC * 11 20/22 TC TC TC CT TC TC TC TC TC TC TC
8948416 TC * 11 20/22 TC AC TC TC AC TC TC TC TC TC TC
8948555 CT * 10 18/20 CT AT CC CT CT CT CT CT CT CT
9007179 AG * 11 20/22 AG AG AG GG AG AG AG AG AG AG TG
9009232 TA * 12 23/24 TA TA TA TA TA TA TA TA TA TA TA GA
9014169 AG * 13 24/26 AG AC AG AG AG AG AC AG AG AG AG AG AG
9037475 GA * 13 24/26 GA GA TA CA GA GA GA GA GA GA GA GA GA
9038551 TC * 10 18/20 TC AA TC TC TC TC TC TC TC TC
9048518 CT * 18 33/36 CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CG AA
9067915 GA * 12 22/24 GA AC GA GA GA GA GA GA GA GA GA GA
9104766 GA * 76 137/152 GA GA TA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA AT CG AA AA AA AA AA AA GA AA AA CC GA
9117170 AC * 10 19/20 AC AC AC AC AC AC AC AC CC AC
9194257 TA * 11 20/22 TA TA CA TG TA TA TA TA TA TA TA
9194998 GA * 11 21/22 GA GA GA GA GA GA GA GA GA TA GA
9238338 TA * 11 20/22 TA TA CA TG TA TA TA TA TA TA TA
9239079 GA * 11 21/22 GA GA GA GA GA GA GA GA GA TA GA
9254097 AG * 12 23/24 AG AG AG AG AG AG AG AG AG AG AA AG
9324204 TG * 11 20/22 TG TA TG TG TG TT TG TG TG TG TG
9349556 AT * 11 21/22 AT AT AT AT AT AT AT AT AT AT AA
9415721 GA * 11 21/22 GA GA GA GA GA GA GA CA GA GA GA
9418440 AT * 13 24/26 AT AT AT AT AT AT AT AT AT AT AT GG AT
9419279 TG * 12 22/24 TG TG TG TG TG TG TG TG TG TG TT TC
9432911 AT * 10 19/20 AT GT AT AT AT AT AT AT AT AT
9510190 CT * 11 20/22 CT CT CT CT CT CT CT CT CT TT AT
9525900 AT * 10 18/20 AT AT AT AT AT AT AT AT AT TG
9526255 AT * 10 19/20 AT AT AT AT AT AT AT AT AT TT
9532623 CT * 10 18/20 CT CT CT CT CT CT CT TT CT GT
9676361 AT * 12 22/24 AT AT AT AG AA AT AT AT AT AT AT AT
9677137 TC * 11 20/22 TC TC TC TG TC TC TC TC TC TC TG
9694784 AG * 27 49/54 AG AG AG AG AG AG AG AG AG AG AG AG AG AG GG AG AG AG AG AG AG AG AG AG AT GA AT
9764113 CT * 12 22/24 CT CT CT CT CT CT CT CT CT CT TT TT
9831726 TG * 10 18/20 TG TG TG TG TG TG TG TG TT TC
9865042 TA * 17 32/34 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TN TG TA
9874937 AT * 14 26/28 AT AT AT AT AT AT AT AT AT AT AT AT AT TA
9875723 AG * 10 18/20 AG AA AG AG AG AG AG TG AG AG
9875763 GT * 10 18/20 GT GT GT GT GT GT GT GT GT AA
9893644 TG * 10 18/20 TG TG TG TG TG TG TG TG TT TC
9977109 TA * 51 92/102 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TT AG TA AA GT AT TA GT
10020070 AC * 10 18/20 AC AC AC AC AC AC AC AC AC TT
10020107 TC * 10 18/20 TC TC TC AC TC TC TC TC TT TC
10020888 AT * 16 29/32 AT AT AT AT AT AT AT AT AT AT AT AT AT CT CT CT
10030776 TA * 18 34/36 TA CA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA CA
10058194 TC * 10 19/20 TC TC TC TT TC TC TC TC TC TC
10081712 CA * 13 25/26 CA CA CA CA CA CA CA CA CA CA CA CA GA
10087380 AG * 10 18/20 AG AG AG AG AG AG AG AC AA AG
10088484 GA * 12 22/24 GA GA AA GA GA GA GA GA GA GA GA GC
10120141 TA * 15 28/30 TA TA TA TA TA TA TA TA TA TA TA TA TA TA AT
10143699 CA * 13 25/26 CA CA CA CA CA CA CA CA CA CA CA CA GA
10149367 AG * 10 18/20 AG AG AG AG AG AG AG AC AA AG
10150471 GA * 12 22/24 GA GA AA GA GA GA GA GA GA GA GA GC
10175132 AT * 12 22/24 AT GT AT AT AT AT AT AT AT AT AT AA
10183426 AC * 10 18/20 AC AC AC AC AC AC AC AC AC TT
10183463 TC * 10 18/20 TC TC TC AC TC TC TC TC TT TC
10184244 AT * 16 29/32 AT AT AT AT AT AT AT AT AT AT AT AT AT CT CT CT
10194132 TA * 18 34/36 TA CA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA CA
10221551 TC * 10 19/20 TC TC TC TT TC TC TC TC TC TC
10252298 CA * 10 18/20 CA CA CA TA CA TA CA CA CA CA
10255262 TC * 11 20/22 TC TC TC TC TC TC TC TG TC TC TG
10283965 TA * 26 48/52 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA CT AT
10306496 AC * 11 20/22 AC AC AC AC AC AC AC AC AC AT AT
10309077 AT * 18 33/36 AT AT AC AT AT AC AT AT AT AT AT AT AT AT AT GT AT AT
10455380 AT * 10 18/20 AT AT AT AT TT AA AT AT AT AT
10523326 CA * 10 18/20 CA CA CA TA CA TA CA CA CA CA
10526290 TC * 11 20/22 TC TC TC TC TC TC TC TG TC TC TG
10566709 AT * 10 18/20 AT AT AT AT TT AA AT AT AT AT
10599919 TA * 26 48/52 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA CT AT
10622450 AC * 11 20/22 AC AC AC AC AC AC AC AC AC AT AT
10625031 AT * 18 33/36 AT AT AC AT AT AC AT AT AT AT AT AT AT AT AT GT AT AT
10794831 AT * 10 18/20 AT AT AT AT AT AT AT AT TA AT
10839474 AC * 14 26/28 AC AC AC AC AC AC AC AC AC AC AC AC AG AT
10846013 AT * 11 21/22 AT AT TT AT AT AT AT AT AT AT AT
10874147 TA * 13 24/26 TA TA TG TA CA TA TA TA TA TA TA TA TA
10882398 AT * 10 18/20 AT AT AT AC AT AT AT AC AT AT
10894817 TA * 21 39/42 TA TA TA TA CA TA TA CA TA TA TA TA TA TA TA TA TA TA TA TA TG
10918543 CT * 10 19/20 CT AT CT CT CT CT CT CT CT CT
10951517 TA * 10 18/20 TA TA TA TA AG TA TA TA TA TA
10972943 CT * 12 22/24 CT CT CT CT CT CT CT CT CT CT CT TG
10973581 CT * 10 18/20 CT CT CT CT CT CT CT CT AT TT
11010301 GA * 10 19/20 GA GA GA GA GA GA GA GA CA GA
11017051 AC * 11 20/22 AC AC TC AC AC TC AC AC AC AC AC
11024735 CT * 10 18/20 CT CT CT CT CT CT CT CT TT CC
11031653 CT * 20 37/40 CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT TC CT TT CT
11035176 GA * 12 22/24 GA GA CA GA GA AA GA GA GA GA GA GA
11038438 GA * 10 18/20 GA GA GA GA GA GA GA AT GA GA
11125322 CT * 10 18/20 CT CT CT CT CT CT CT CT CT GC
11140092 GA * 10 19/20 GA GA GA GA GA GA GA GA GA GT
11164710 TA * 16 29/32 TA TA TA TA TA TA TA TA TA TA TA TA TA TA AT TT
11207106 GA * 13 24/26 GA GA GA GA GA GA GA GA GA GA GA GA AC
11246713 TG * 12 22/24 TG TG TG TT TT TG TG TG TG TG TG TG
11447914 TA * 23 42/46 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TT AT AA TA
11551799 TC * 12 23/24 TC TC TC TT TC TC TC TC TC TC TC TC
11551911 CT * 13 24/26 CT CT CT CC CT CT CT CA CT CT CT CT CT
11571025 TG * 10 18/20 TG TG TG AG TG TG TG TG TG TC
11575620 AG * 17 31/34 AG AG AG AG AA AG AG AA AG AG AG AG AG AG AG AG AT
11601474 CA * 10 18/20 CA CA CA CA CA TA CA CA AA CA
11620509 TC * 10 18/20 TC TC TG TC TC TC TG TC TC TC
11630318 TA * 10 18/20 TA TA TA TA AA TA TA AA TA TA
11651693 AG * 11 20/22 AG AG AG AG AA AG AG AG AG AG AA
11672772 GA * 12 22/24 GA GA GA GA GA GA GA GA GA GA AA GG
11713817 TA * 11 20/22 TA TA TA TA TA TA TA TA TA TA AG
11765593 AG * 10 19/20 AG AG AG AG AG TG AG AG AG AG
11790263 TC * 10 18/20 TC CC CC TC TC TC TC TC TC TC
11822759 AG * 13 24/26 AG AG AG AG AG AG AG AG AG AG AC AA AG
11992844 CT * 10 18/20 CT CT CT CT CT CT CT CT AT TT
11999105 CT * 15 27/30 CT CT CT CT CT CT CT CT CT CT CT CT CT GT GC
12001101 CT * 18 33/36 CT CT CT CT CT CT CT CT CT CT CT CT CT CT CT TG CT CC
12001316 GA * 10 18/20 GA GA GA TA GA GA GA AA GA GA
12002792 CT * 11 21/22 CT CT CT CT CT CT CT CT CT CT CC
12003602 AT * 22 41/44 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT CA CT
12008634 TA * 23 42/46 TA TT TA TA TA TA TA TT TA TA TA TA TA TA TA TA TA TA TA TA TA CA CA
12009387 TA * 13 25/26 TA TA TA TA TA TA TA TA TA TA TA TA CA
12010176 AT * 11 20/22 AT AT AT AT AT AT AT AT AT AT CG
12016078 TA * 35 64/70 TA TA TA TG TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA AT TC GT
12016785 TA * 11 20/22 TA TA TA TA TA TA TA TG GA TA TA
12019512 AC * 42 77/84 AC AC AC AG AA AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AT AT GA TC
12020919 TG * 14 26/28 TG TG TA TG TG TG TG TG TG TA TG TG TG TG
12022754 TA * 12 22/24 TA TA TA TA CA TA TA TA TA TA TA TC
12058139 GA * 11 20/22 GA GA CG GA GA GA GA GA GA GA GA
12067526 CA * 10 18/20 CA CA CA CA TA CA CA CA CA TA
12085866 CA * 11 20/22 CA CA CA CA CA CA CG CA CA CA TA
12124824 TA * 10 18/20 TA TA TA TA TA TG TA TA TA TT
12152277 AT * 12 22/24 AT GT AT AT AT AT AT AT AT AT AT AA
12181014 CT * 10 18/20 CT CT CT CT CT CT CT CT CT TG
12183020 CT * 15 27/30 CT CT CT CT CT CT CT CT CT CT CT CT CT TG GT
12200101 TC * 10 18/20 TC TC TC TC TC TC TC TC TC AA
12202716 AC * 12 23/24 AC AC AC AC AC AC AC AC AC AC AC AA
12220550 TC * 65 118/130 TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TA AA AA GG CC CT AA
12241778 TG * 11 20/22 TG TG AG AG TG TG TG TG TG TG TG
12241936 GA * 12 22/24 GA GA GA GG GG GA GA GA GA GA GA GA
12361852 AT * 11 20/22 AT AT TT AT AT AT AT AC AT AT AT
12506555 TA * 10 18/20 TA AC TA TA TA TA TA TA TA TA
12635719 TA * 51 92/102 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TT AG TA AA GT AT TA GT
12690019 TA * 15 28/30 TA TA TA TA TA TA TA TA TA TA TA TA TA TA AT
12804714 AT * 12 23/24 AT AT AT AT AT AT AC AT AT AT AT AT
12824681 AC * 10 18/20 AC AC AC AC AC AC AC AC AC CA
12912991 AT * 11 20/22 AT AT AT AT AT AT AT AT AT AT TC
12941332 TA * 11 20/22 TA TT TA TT TA TA TA TA TA TA TA
12941443 TA * 13 24/26 TA TA TA TA TA TA TA TA TA TA TA TT TT
12941844 AT * 11 20/22 AT AA AT AT AT AT AT AT AT AT TT
12950376 CA * 18 33/36 CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA CC TC
12953450 TG * 10 19/20 TG TG TG TG TG TG TG TG TG TC
12953752 GT * 11 21/22 GT GT GT GT GT GT GT GT GT GT GC
12997989 CA * 10 18/20 CA CA CA CA CA CA CA GA GA CA
13080856 GA * 10 19/20 GA GA GA GA GA GA GA TA GA GA
13131044 AC * 22 40/44 AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC TA AC GA
13144014 GT * 17 32/34 GT GT GT GT GT GT GT GT GT GT GT GT GT GT GT CT GA
13144066 CT * 17 31/34 CT CT CT CT CT CT CT CT CT CT CT CT CT CT CA CA CA
13144126 AG * 12 22/24 AG AA GG AG AG AG AG AG AG AG AG AG
13148321 AT * 10 18/20 AT AT AT AA AT AT AT AT AT TT
13257935 CT * 11 20/22 CT CT CT CT CT CT CT CT CT CA CG
13265992 CT * 10 18/20 CT AC CT CT CT CT CT CT CT CT
13266722 TA * 12 22/24 TA AA TA TA TA TA TA TA TA TA TA TT
13492575 AG * 11 20/22 AG CG AG AG AG AG AG AG AG AC AG
13502422 CT * 10 18/20 CT CT CT CT CT TT CT CC CT CT
13528816 TC * 13 24/26 TC TC TA TC TC TC TC TC TC TC TC TC TG
13529310 TC * 11 21/22 TC TC TC TC CC TC TC TC TC TC TC
13555814 TA * 10 18/20 TA TA TA TA TA TA TA TA TA CC
13565215 AG * 36 65/72 AG GG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG TG CG AG TG GA AG AA AG
13585969 TC * 21 39/42 TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TT TT TC TA
13600692 TA * 11 20/22 TA GT TA TA TA TA TA TA TA TA TA
13635610 AT * 13 24/26 AT CT AT AT AT AT AT AT AT AT AT AT AG
13645335 AT * 31 56/62 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AG CT TA GC
13652649 TA * 22 40/44 TA TT TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TC AT
13657019 TC * 10 18/20 TC TC TC TC TC TC TC TC CT TC
13664013 GA * 23 43/46 GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA TA GA AA AA
13718517 AT * 28 51/56 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT GT AT AT CT AG AT CG AT AT
13735566 AT * 16 29/32 AT TC AT AT AT AT AT AT AT AT AT AT AT AT AC AT
13739288 AG * 12 22/24 AG AG AG AG GG AG AG AG TG AG AG AG
13751271 AG * 11 20/22 AG AG AG AG AG AG AG AG AG AA AT
13776744 TA * 12 22/24 TA TA TA TA TA TA TA TA TA TA TT TT
13786089 TC * 21 39/42 TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TT TT TC TA
13798290 TA * 11 20/22 TA GT TA TA TA TA TA TA TA TA TA
13913082 AT * 11 20/22 AT GT AT AT AT AT AT AT AT GT AT
13942911 TA * 10 18/20 TA TA TA TA TA TA TA CA TG TA
13962653 TA * 11 20/22 TA TA CA TA TA CA TA TA TA TA TA
13971614 TC * 13 24/26 TC TC TC TC TC TC TC TC TC TC TC TT TT
13994501 AT * 11 20/22 AT AT AT GT AT AT AT GT AT AT AT
14024414 AT * 10 18/20 AT AT AT AT GT AT AT AT AT GT
14030511 TA * 11 20/22 TA TA TA CA TA TA TA TA TA TA TT
14050817 TA * 12 22/24 TA TA TA TA TA TA TA TA TA TA TG TG
14050841 TG * 16 30/32 TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG GC
14066548 GT * 11 20/22 GT GT GT GT GG GT GT GT GG GT GT
14066598 GT * 13 24/26 GT GT GT GT GT GG GT GT GT GG GT GT GT
14110266 TA * 10 18/20 TA CA TG TA TA TA TA TA TA TA
14127297 GA * 10 18/20 GA GA GA GA TA GA GA GA GA GT
14183456 AT * 11 20/22 AT AT AT AT AT AT AT AT AT TT AA
14230789 AT * 16 29/32 AT TC AT AT AT AT AT AT AT AT AT AT AT AT AC AT
14234511 AG * 12 22/24 AG AG AG AG GG AG AG AG TG AG AG AG
14246494 AG * 11 20/22 AG AG AG AG AG AG AG AG AG AA AT
14271969 TA * 12 22/24 TA TA TA TA TA TA TA TA TA TA TT TT
14274821 TA * 31 56/62 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TT CG AT TT
14284577 TA * 13 24/26 TA TA TA TA TA TA TA TA TA TA TA GA TC
14287568 TC * 13 24/26 TC TC TC TC TC TG TC TC TC TG TC TC TC
14367261 GT * 10 18/20 GT GT GT GT GT GT GT GT GA GC
14409769 TA * 25 45/50 TA GA TA TA CA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TC AG
14535118 GA * 10 18/20 GA GA GA GA TA GA GA GA GA GT
14591276 AT * 11 20/22 AT AT AT AT AT AT AT AT AT TT AA
14629262 TC * 13 24/26 TC TC TC TC TC TG TC TC TC TG TC TC TC
14635038 AT * 12 23/24 AT AT AT GT AT AT AT AT AT AT AT AT
14635266 TA * 12 22/24 TA TA TA TA TA TA TA TA TA TA TT TT
14725668 GA * 10 18/20 GA GA GA GA TA GA GA GA GA GT
14781829 AT * 11 20/22 AT AT AT AT AT AT AT AT AT TT AA
14819815 TC * 13 24/26 TC TC TC TC TC TG TC TC TC TG TC TC TC
14825591 AT * 12 23/24 AT AT AT GT AT AT AT AT AT AT AT AT
14825819 TA * 12 22/24 TA TA TA TA TA TA TA TA TA TA TT TT
14886117 TA * 22 40/44 TA TG TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TG TA CT
14971824 AT * 28 52/56 AT AT AA AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT GT AT GG
14991070 TC * 13 24/26 TC TC TC TA TC TC CC TC TC TC TC TC TC
14997002 GA * 13 24/26 GA GA AN GA GA GA GA GA GA GA GA GA GA
15031099 AT * 31 56/62 AT TT GT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AA TT TA
15107730 CA * 10 18/20 CA CA CA CA CA CA CC CA CA CG
15161829 TC * 10 18/20 TC TC TC TC TC TG CC TC TC TC
15264736 AT * 28 52/56 AT AT AA AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT GT AT GG
15282234 AT * 31 56/62 AT TT GT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AA TT TA
15367396 GT * 12 22/24 GT TT GT GT GT GT GT GT GT GT GT GG
15373267 AG * 21 38/42 AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG GA CA
15415857 TG * 12 22/24 TG GG TG TG TG TG TG TG TG TG TT TG
15453231 CA * 10 18/20 CA CA CA CA CA CA CA CA CA GG
15458245 TG * 11 20/22 TG TA TT TG TG TG TG TG TG TG TG
15487499 TC * 12 22/24 TC TC TT TC TC TC TC TC TC TT TC TC
15528393 CA * 11 21/22 CA CA CA AA CA CA CA CA CA CA CA
15531857 CA * 11 21/22 CA CA CA AA CA CA CA CA CA CA CA
15547448 GA * 12 23/24 GA GA GA GG GA GA GA GA GA GA GA GA
15548884 AT * 12 22/24 AT AT AT AT AT AT AT AT AT AT TT AA
15552412 TG * 18 34/36 TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TA TA
15555979 CA * 10 19/20 CA CA CA CA CA CA CA CA AA CA
15612838 TA * 13 24/26 TA TA TA TA TA TA TA TA TA TA TA TC TC
15682183 TC * 83 150/166 TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC AC TT TC AA TT GC CA TT AG AC TA AC TG TT
15682447 AC * 17 31/34 AC AC AC AC AC AC AC AC AC AC AC AC GC AC AC AC TT
15708774 AT * 10 18/20 AT AT AT AT AT AT AT AA AT TT
15721668 CA * 11 20/22 CA CA CA CT CA CA CA CA CA CA AA
15741567 AC * 12 22/24 AC AC AC AC AC AC AC AC AC AT AC AA
15793279 AC * 10 18/20 AC AC AC AC AC AC AC AC AA AA
15800646 AG * 22 40/44 AG GA AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG CT
15806035 CT * 10 18/20 CT CT CT CT CT CT CT CT CC AT
15807330 AC * 12 22/24 AC AC AC AC AC AC AC AC AT AT AC AC
15809597 TC * 10 18/20 TC CC TC TC TT TC TC TC TC TC
15815717 CT * 10 18/20 CT CT CT CC CC CT CT CT CT CT
15817163 GA * 11 21/22 GA GA GA GA GA GA GA GA GA GA AA
15821471 TC * 40 73/80 TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TT TC TA TT CC TA CT
15824067 TG * 12 22/24 TG TG TG AG TG TG TG TG AG TG TG TG
15825132 AT * 13 24/26 AT AT AT AT AT AT AT AT AT AT AT AT TG
15825801 AT * 35 63/70 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AA TC TG TC
15827486 TC * 10 18/20 TC AC TC TC TC TC TC TC TC TT
15882454 TA * 13 24/26 TA TA TA TA TA TA TA TA TA TA TA TC TC
15951798 TC * 83 150/166 TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC AC TT TC AA TT GC CA TT AG AC TA AC TG TT
15952062 AC * 17 31/34 AC AC AC AC AC AC AC AC AC AC AC AC GC AC AC AC TT
15978389 AT * 10 18/20 AT AT AT AT AT AT AT AA AT TT
15991283 CA * 11 20/22 CA CA CA CT CA CA CA CA CA CA AA
16011182 AC * 12 22/24 AC AC AC AC AC AC AC AC AC AT AC AA
16062895 AC * 10 18/20 AC AC AC AC AC AC AC AC AA AA
16070262 AG * 22 40/44 AG GA AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG CT
16075651 CT * 10 18/20 CT CT CT CT CT CT CT CT CC AT
16076946 AC * 12 22/24 AC AC AC AC AC AC AC AC AT AT AC AC
16079214 TC * 10 18/20 TC CC TC TC TT TC TC TC TC TC
16085332 CT * 10 18/20 CT CT CT CC CC CT CT CT CT CT
16086779 GA * 11 21/22 GA GA GA GA GA GA GA GA GA GA AA
16091081 TC * 42 77/84 TC GC TG TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TT TC TA TT CC TA
16093683 TG * 12 22/24 TG TG TG AG TG TG TG TG AG TG TG TG
16094749 AT * 13 24/26 AT AT AT AT AT AT AT AT AT AT AT AT TG
16095418 AT * 21 39/42 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AA TC
16097079 TC * 10 18/20 TC AC TC TC TC TC TC TC TC TT
16120447 TA * 10 19/20 TA TA TG TA TA TA TA TA TA TA
16167665 TA * 10 18/20 TA TA TA TA TA TA TA TA TC AA
-----------------------------------------------------------------------------------------
Total sequence length......................... 16183833
Minimum Di-Nucleotide repeat units............ 10
Mismatch allowed ............................. 10%
Total number of repeats detected.............. 514
-----------------------------------------------------------------------------------------
Length distribution of Di-Nucleotide Repeats
No. of Repeat Units AT TA AG GA AC CA TG GT TC CT GC CG
10 to 14 52 48 45 52 30 31 33 15 55 36 0 0
15 to 19 12 8 4 3 3 3 6 1 2 6 0 0
20 to 24 3 6 4 3 1 1 1 0 2 2 0 0
25 to 29 4 4 1 0 0 0 0 0 0 1 0 0
30 to 34 4 2 1 0 0 0 0 0 1 0 0 0
35 to 39 3 1 2 0 0 0 0 0 0 0 0 0
40 to 44 1 3 0 0 1 1 0 0 3 0 0 0
45 to 49 0 1 0 0 0 0 0 0 0 0 0 0
50 and more 0 2 1 3 0 0 1 0 5 0 0 0
-----------------------------------------------------------------------------------------
Total 79 75 58 61 35 36 41 16 68 45 0 0
-----------------------------------------------------------------------------------------
Frequency distribution of different di-nucleotide repeat classes
79 AT + 75 TA = 154
58 AG + 61 GA + 45 CT + 68 TC = 232
16 GT + 41 TG + 36 CA + 35 AC = 128
0 GC + 0 CG = 0
-----------------------------------------------------------------------------------------
Di-Nucleotide repeats in C. elegans Chromosome-I complete sequence
Minimum di-nucleotide repeating units = 10 (allowing a maximum of 10% mismatch)
Total 514 repeats covering 14144 / 15462 base pairs
Length distribution of all di-nucleotide repeats
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
no. of repeat-units 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 >=50
total repeats 163 107 75 45 7 10 16 11 10 1 3 6 8 5 1 1 3 3 3 0 0 5 0 2 1 3 1 0 2 0 2 1 4 2 0 0 0 0 1 0 12
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Length distribution of different di-nucleotide repeat classes
no. of repeat-units 10-14 15-19 20-24 25-29 30-34 35-39 40-44 45-49 >=50
total repeats--> 397 48 23 10 8 6 9 1 12
AT 52 12 3 4 4 3 1 0 0
TA 48 8 6 4 2 1 3 1 2
AG 45 4 4 1 1 2 0 0 1
GA 52 3 3 0 0 0 0 0 3
AC 30 3 1 0 0 0 1 0 0
CA 31 3 1 0 0 0 1 0 0
TG 33 6 1 0 0 0 0 0 1
GT 15 1 0 0 0 0 0 0 0
TC 55 2 2 0 1 0 3 0 5
CT 36 6 2 1 0 0 0 0 0
GC 0 0 0 0 0 0 0 0 0
CG 0 0 0 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------
Sequence-wise distribution of di-nucleotide repeats
Sequence AT TA AG GA AC CA TG GT TC CT GC CG
--------------------------------------------------------------------------------------------------------
lcl|worm_chr_I -( 16183833 bp) 79 75 58 61 35 36 41 16 68 45 0 0
--------------------------------------------------------------------------------------------------------
Total ( 16183833 bp) 79 75 58 61 35 36 41 16 68 45 0 0
--------------------------------------------------------------------------------------------------------
-------------------------------------------------------------------------------
Frequency distribution of different di-nucleotide repeat classes
79 AT + 75 TA = 154
58 AG + 61 GA + 45 CT + 68 TC = 232
16 GT + 41 TG + 36 CA + 35 AC = 128
0 GC + 0 CG = 0
-------------------------------------------------------------------------------
-------------------------------------------------------------------------------
Frequency distribution of di-nucleotides repeated for 20 times or more
--repeats longer than 40 bp
15 AT + 19 TA = 34
9 AG + 6 GA + 3 CT + 11 TC = 29
0 GT + 2 TG + 2 CA + 2 AC = 6
0 GC + 0 CG = 0
-------------------------------------------------------------------------------
Total repeats >= 40 bp = 69
-------------------------------------------------------------------------------
© Division of Biochemical Sciences, National Chemical Laboratory, Pune 411008, INDIA