Mono-Nucleotide Repeats in Genomic Sequences
Mono-Nucleotide Repeats in
C. elegans Chromosome-I complete sequence
Genomic Sequence:
lcl|worm_chr_I
Position Repeat-length Repeat
74059 20/22 CCCCCCCCCCCCCCCCCCCAAC
117717 19/21 TTTTTTTTTTTTTAATTTTTT
244930 18/20 TTTTTAATTTTTTTTTTTTT
250905 18/20 TTTTTTTTTTTTTTTTTTGC
362346 18/20 AAAAAAAAAAGAAAAATAAA
413559 19/21 GGGGGGGGGGGGGGGGGGGAT
551489 20/22 CCCCCCCCCCCCCCCCTCCCCA
565400 20/22 AAAAAAAAACCAAAAAAAAAAA
575077 19/21 AAAAAACAAAAAAACAAAAAA
575126 26/28 AAAAAAAAACAAAAAAAAACAAAAAAAA
577604 21/23 TTTTTTCTTTTTTTTTTTTTTTC
594423 18/20 GGGGGGGGGGGGGGGGGGTA
597502 22/24 CCCCCCCCCCCCCCCCCCCCTCCT
602913 20/22 GGGGGGGGGGGGGGGGGGGGCA
603269 18/20 CCCCCCCCCCCCCCCCCACG
610518 23/25 TTTTTTTTTTGTTTTTTTTTCTTTT
624314 20/22 AAAAAAAAAACAAAAAAAAAAC
697614 22/24 GGGGGGGGGGGGGGGGGGGGGCAG
712497 21/23 GGGGGGGGGGGGGGGGGGGGGAT
717918 19/21 AAAAAAAAACAAAAAAAAAAG
764093 18/20 AAAAAATTAAAAAAAAAAAA
768347 22/24 CCCCCCCCCCCCCCCCATCCCCCC
859143 22/24 AAAAAAAAAAAAAAATAAATAAAA
896173 25/27 AAAAAAAAAAAAAAAAAAAAAAACCAA
900022 19/21 AAAAAAAAAAAAAACAAATAA
904744 19/21 TTTTTGTTTTTTTTTTTTTTA
914176 18/20 TTTTTTGTTTTTTATTTTTT
931159 25/27 AAAAAAAAAAAAAAAAAAAAAAAAATT
938692 25/27 TTTTTTTTTTTTTTTTTTTTTCATTTT
1012646 18/20 AAAAAAAAAATAAAAATAAA
1033571 18/20 TTTTTTGTTTTTTGTTTTTT
1037377 21/23 AAAAAAAACAAAAAACAAAAAAA
1043075 21/23 AAAAAAAAAGACAAAAAAAAAAA
1161009 18/20 AAAAAAAAATAAAAAAGAAA
1199778 19/21 GGGGGGGGGGGGGGAGGGGTG
1203177 22/24 TTTTTTTTTTTTTGGTTTTTTTTT
1239311 19/21 TTTTTTCTTTTGTTTTTTTTT
1283769 18/20 CCCCCCCCCCCCCCCCCCTT
1448610 21/23 CCCCCCCCCCCCCCCCCCTCCTC
1455255 24/26 CCCCCCCCCCCCCCCCCCCCCCCTTC
1466940 18/20 TTTTTTTTGTTGTTTTTTTT
1479905 19/21 AAAAAAAAAACAAAAAAAAAC
1559026 18/20 TTTTTTCTTTTTTTTTTCTT
1571612 18/20 CCCCCCCCCCCCCCCCCCGA
1659467 18/20 AAAAAAAAAAAAAAAAAACT
1662834 23/25 AAAAAAAAAAGAAAAAAAAAGAAAA
1666660 22/24 TTTTTTTTTTTTTTTTTTGGTTTT
1671652 18/20 TTTTTTTTTCTTTTTATTTT
1672860 18/20 AAAAAAAAAAAAAGAGAAAA
1678521 19/21 TTTTTTTTTTTTTTTTTAATT
1680097 20/22 TTTTTTTTTTTTTTTAATTTTT
1689445 19/21 TTTTTTTTTTTTGATTTTTTT
1694311 18/20 TTTTTTGTTTTATTTTTTTT
1701882 19/21 AAAAAAAAAAATACAAAAAAA
1714109 20/22 GGGGGAGGGGGGGGGGGGGTGG
1727716 18/20 TTTTTTTTTCTTTTTTTTTG
1728919 18/20 GGGGGGGGGGGGGGGGGGTA
1752825 18/20 CCCCCCCCCCCCCCCCCACT
1879619 18/20 AAAAAAAAAAAAAAAAAATT
1886005 19/21 TTTTTTCTCTTTTTTTTTTTT
1903619 18/20 AAAAAATTAAAAAAAAAAAA
1908909 19/21 AAAAAAAAAAACAAAAAAAAC
1913821 21/23 AAAAAAAAAAAAACAAAAAAAAT
1925700 18/20 AAAAAACAAAAAACAAAAAA
1925731 18/20 AAAAAAACCAAAAAAAAAAA
1925752 22/24 AAAAAAAAACAAAAAAACAAAAAA
1925935 18/20 AAAAAAAAACAACAAAAAAA
1925964 19/21 AAAAAAAAACAACAAAAAAAA
1988343 18/20 CCCCCCCCCCCCCCCCCACA
2007252 20/22 CCCCCCCCCCCCCCCCCACCTC
2118051 18/20 AAAAAAAAAAAACATAAAAA
2218590 18/20 AAAAAAACCAAAAAAAAAAA
2245946 21/23 AAAAAAAAAAAAACAAAAAAAAT
2299445 19/21 AAAAAAAAAAACAAAAATAAA
2313483 19/21 TTTTTTGTTTTTTTTTTTTTG
2317805 18/20 AAAAAATGAAAAAAAAAAAA
2337198 20/22 AAAAAAAAAAGAAAAAAAAATA
2439390 19/21 TTTTTTTTTCTGTTTTTTTTT
2519014 18/20 AAAAAACAAAAAAAATAAAA
2523451 25/27 AAAAAAACAAAAAAAAAGAAAAAAAAA
2606774 18/20 TTTTTTTTTCTATTTTTTTT
2623951 18/20 AAAAAAAAAGAAAAAAAGAA
2775460 19/21 TTTTTTTTTTTTAATTTTTTT
2776178 18/20 TTTTTTATTTTTATTTTTTT
2783413 25/27 TTTTTCTTTTTTTTTTGTTTTTTTTTT
2808267 18/20 AAAAATCAAAAAAAAAAAAA
2808459 19/21 TTTTTTGTTTTGTTTTTTTTT
2812789 18/20 AAAAATAAAAAACAAAAAAA
2820352 19/21 AAAAAAAAAACAAAAAAAACA
2845304 23/25 GGGGGGGGGGGGGGGGGGGGGGGAT
2869683 18/20 AAAAAAATAACAAAAAAAAA
2871797 18/20 AAAAAAAAAAAACGAAAAAA
2971722 18/20 AAAAAAAAAAAACAAAAAAT
3033124 18/20 TTTTTTTTTTTTAATTTTTT
3046620 19/21 GGGGGGGGGGGGGGGGGGTGA
3053270 21/23 TTTTTTTTTTTTTGGTTTTTTTT
3064203 18/20 TTTTTTTGTTGTTTTTTTTT
3134649 18/20 AAAAAAAAAAAAATAAAAAC
3136088 18/20 AAAAAAATTAAAAAAAAAAA
3203925 19/21 AAAAAAAAAAAAGACAAAAAA
3259013 19/21 TTTTTTTTTCTTTTTTTTTTC
3260309 18/20 TTTTTGTTTTTTTTTCTTTT
3352534 22/24 TTTTTTCTTTTTTTTTCTTTTTTT
3383678 18/20 AAAAATGAAAAAAAAAAAAA
3517418 18/20 AAAAAAAAAAAAAACTAAAA
3538013 19/21 AAAAAAAACAAATAAAAAAAA
3585122 20/22 TTTTTTTTTGTTTTTTGTTTTT
3713100 19/21 TTTTTTTTTTCGTTTTTTTTT
3747088 19/21 AAAAAACAAAAAAAAACAAAA
3828163 18/20 TTTTTTTCTTCTTTTTTTTT
3928770 19/21 TTTTTTTTATTATTTTTTTTT
3937671 20/22 AAAAAAAAAAGAAAAGAAAAAA
4010706 23/25 CCCCCCCCCCCCCCCCCCCCACCTC
4061530 18/20 AAAAAAAGAAAAGAAAAAAA
4186585 18/20 TTTTTTTCTTTTTTTTCTTT
4570550 20/22 CCCCCCCCCCCCCCTCCCCCAC
4605429 19/21 CCCCCCCCCCCCCCCCCCCAT
4680763 18/20 TTTTTCTTTTCTTTTTTTTT
4733230 19/21 TTTTTTATTTTTTTTTTTTTG
4738469 19/21 AAAAAAAAACAAAAAAAAACA
4742917 18/20 TTTTTTTTGTTTTTTTTTCT
4760743 20/22 AAAAAAAAAAAAGATAAAAAAA
4773997 19/21 AAAAAATAAAAAATAAAAAAA
4867423 20/22 AAAAAGAAAAAAAAAAGAAAAA
4948610 20/22 GGGGGGGGGGGGGGGGGGGTGC
5177174 20/22 AAAAAAAAACCAAAAAAAAAAA
5277637 18/20 CCCCCCCCCCCCCCTCCCCT
5408108 18/20 AAAAAAAAAAAACAAGAAAA
5452590 19/21 AAAAAAAAAACTAAAAAAAAA
5500239 18/20 TTTTTTTTTTTGTTTTTTCT
5553294 20/22 TTTTTTTTTTTTTTAATTTTTT
5577331 19/21 AAAAAAACAAAAAAAATAAAA
5713877 19/21 AAAAAACAAAATAAAAAAAAA
5766047 19/21 TTTTTTTTTTTTTTTTTTTGA
5830754 20/22 AAAAAATGAAAAAAAAAAAAAA
5851338 18/20 TTTTTTTTTGTTTTTTGTTT
5942666 19/21 AAAAAAAAAAAAAAAAAGAAT
6002800 20/22 AAAAAAAAGAAAAAAAAACAAA
6137650 18/20 AAAAAAATTAAAAAAAAAAA
6138830 20/22 TTTTTTTTTGTTGTTTTTTTTT
6165048 20/22 TTTTTTTCTTTTTTTTTTTGTT
6222865 21/23 TTTTTTTTATTTTTTATTTTTTT
6316009 20/22 AAAAAAAAAGAAAAAAAAATAA
6347849 22/24 GGGGGGGGGGGGGGGGGGGGGTTG
6356935 19/21 TTTTTCTTTTTCTTTTTTTTT
6438817 19/21 AAAAAAAAAACAAAAAAAAAT
6501191 19/21 AAAAAAAAAACACAAAAAAAA
6515333 18/20 TTTTTTTCTTCTTTTTTTTT
6534912 19/21 TTTTTTTTTTGATTTTTTTTT
6691626 18/20 AAAAAAAAAAAAAAGAAAGA
6701583 20/22 AAAAAAAACTAAAAAAAAAAAA
6797896 18/20 AAAAAAAGAAAAAAAGAAAA
6907363 18/20 AAAAAAAAAAAAAAAAAACG
6977410 18/20 TTTTTGATTTTTTTTTTTTT
7019741 21/23 AAAAAAAAAGAAAAAGAAAAAAA
7058222 19/21 TTTTTCTTTTTTTTTTTTGTT
7058255 19/21 AAAAAAAAAAACAAAAAAAGA
7060884 18/20 AAAAAATAAAAAAGAAAAAA
7167876 18/20 AAAAAAAAACAACAAAAAAA
7289446 18/20 TTTTTTTTTCTTTTTTTTTG
7346992 18/20 TTTTTTTCTTTTTGTTTTTT
7363478 19/21 TTTTTGTTTTTTTTTTTTATT
7563800 20/22 TTTTTTCTTTTTTCTTTTTTTT
7567135 23/25 GGGGGGGGGGGGGGGGGGGGGGTTG
7627423 20/22 AAAAAATAAAAAAAGAAAAAAA
7669438 18/20 AAAAAAAGCAAAAAAAAAAA
7670663 20/22 CCCCCCCCCCCCCCCCCCTCCA
7723371 18/20 TTTTTGTTTTATTTTTTTTT
7786619 18/20 TTTTTTTTTTGTTTTTTTGT
7849936 18/20 AAAAAATCAAAAAAAAAAAA
7859157 30/33 AAAAAAAAAAAAAAAAAAAAAAAAAAAAACATT
7901229 19/21 CCCCCCCCCCCCCCCCCCTGC
7919757 18/20 AAAAAAGAAAAAAAAAGAAA
7992950 18/20 TTTTTTTTTTTTTAATTTTT
8009177 18/20 AAAAAAAAAGAAAAAAAAAG
8020877 33/36 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAA
8023789 19/21 TTTTTTTTTTTTTTGATTTTT
8125885 22/24 CCCCCCCCCCCCCCCCCCCCCTCT
8163085 19/21 AAAAAAAAAATAAAAAAAAAT
8196866 19/21 AAAAAAAAAATAAAAAAAAAT
8360496 19/21 TTTTTTTTGTTTTTTTTTTGT
8360648 19/21 AAAAAAAAAAACAAAAAATAA
8360839 19/21 AAAAAATAAAAATAAAAAAAA
8417588 19/21 GGGGGGGGGGGGGGGGGGGAC
8430220 18/20 AAAAAAAAAGAAGAAAAAAA
8432760 20/22 AAAAAAAAATCAAAAAAAAAAA
8434476 18/20 AAAAAAAAAAAACAAAAAAC
8557151 18/20 TTTTTTTTTTCGTTTTTTTT
8669493 19/21 AAAAAAAAACAACAAAAAAAA
8702139 19/21 GGGGGGGGGGGGGGGTGGGGC
8726785 21/23 CCCCCCCCCCCCCCCCCCATCCC
8780116 21/23 AAAAAAAAACAAAAAAAAACAAA
8788630 18/20 TTTTTATTCTTTTTTTTTTT
8797704 19/21 AAAAAAACAAAAAAAAAAGAA
8816951 18/20 AAAAAAAAAGTAAAAAAAAA
8834535 20/22 AAAAAAGAAAAGAAAAAAAAAA
9031728 19/21 TTTTTTTTGTTTTTTTTTTGT
9031880 19/21 AAAAAAAAAAACAAAAAATAA
9032071 19/21 AAAAAATAAAAATAAAAAAAA
9088804 19/21 GGGGGGGGGGGGGGGGGGGAC
9101429 18/20 AAAAAAAAAGAAGAAAAAAA
9103969 20/22 AAAAAAAAATCAAAAAAAAAAA
9105682 18/20 AAAAAAAAAAAACAAAAAAC
9223371 27/30 GGGGGGGGGGGGGGGGGGGGGGGGGGTTGA
9223804 27/30 CCCCCCCCCCCCCCCCCCCCCCCCCCTGCA
9311063 19/21 AAAAAAAAACAACAAAAAAAA
9343698 19/21 GGGGGGGGGGGGGGGTGGGGC
9368340 25/27 CCCCCCCCCCCCCCCCCCCTCCCGCCC
9410089 18/20 AAAAAAAAAGTAAAAAAAAA
9427668 20/22 AAAAAAGAAAAGAAAAAAAAAA
9511981 18/20 TTTTTATTTTTTATTTTTTT
9575405 20/22 TTTTTTTTTTCATTTTTTTTTT
9601458 19/21 AAAAAAAAAACAAAAATAAAA
9674043 32/35 AAAAAAAAAAAAAAAGAAAAAAAAGAAAAAAAAAT
9674616 19/21 AAAAAAAAAGAAAAAAAAAAC
9760958 18/20 AAAAAACAAAAAAAAAAAGA
9801251 19/21 TTTTTTTGTTTTTTGTTTTTT
9802035 18/20 TTTTTTGTTTTTTGTTTTTT
9827423 18/20 TTTTTTCGTTTTTTTTTTTT
9889342 18/20 TTTTTTCGTTTTTTTTTTTT
9906996 21/23 TTTTTTTTTCATTTTTTTTTTTT
9935697 18/20 AAAAAATAAAAAAAAAAAAC
9942942 18/20 GGGGGGGGGGGGGGGGGGTT
9948723 23/25 AAAAAAAAAATAAAAAAAGAAAAAA
9968645 18/20 TTTTTTTTTTTTTTTTTTGG
9971573 20/22 TTTTTTTTTTTTTTTTTGGTTT
9971772 21/23 TTTTTTCTTTTTTTTTCTTTTTT
9985075 20/22 AAAAAAAAAACAAAAAAAAAAG
10007609 18/20 AAAAACAACAAAAAAAAAAA
10014832 19/21 TTTTTTTTTTTTTTAATTTTT
10027790 18/20 AAAAAAAAAAAAACAAATAA
10052196 25/27 GGGGGGGGGGGGGGGGTGGGGGGGGCG
10052805 19/21 TTTTTTTTTCTTTTTTTTTTC
10057718 18/20 TTTTTTTTTTGATTTTTTTT
10062781 18/20 TTTTTTTTTAGTTTTTTTTT
10075795 24/26 CCCCCCCCCCCCCCCCCCCCCCCGCG
10087212 19/21 AAAAAAAAAAAAAAAAAAAGG
10092882 23/25 TTTTTTTTTGTTTTTTTTTGTTTTT
10111067 23/25 GGGGGGGGGGGGGGGGGGGGGGGTT
10112214 20/22 AAAAAAAAGAATAAAAAAAAAA
10124768 18/20 TTTTTTTTTAGTTTTTTTTT
10137782 24/26 CCCCCCCCCCCCCCCCCCCCCCCGCG
10149199 19/21 AAAAAAAAAAAAAAAAAAAGG
10191146 18/20 AAAAAAAAAAAAACAAATAA
10215553 25/27 GGGGGGGGGGGGGGGGTGGGGGGGGCG
10216162 19/21 TTTTTTTTTCTTTTTTTTTTC
10221075 18/20 TTTTTTTTTTGATTTTTTTT
10228079 18/20 TTTTTTGTTTTTTTTTTGTT
10327543 21/23 AAAAACAAAAAAAAAAACAAAAA
10340000 18/20 TTTTTGATTTTTTTTTTTTT
10366289 23/25 GGGGGGGGGGGGGGGGGGGGGGGTC
10405213 20/22 CCCCCCCCCCCCCCCCCCATCC
10412949 18/20 CCCCCCCCCCCCCCCCCCGG
10437414 19/21 CCCCCCCCCCCCCCCCCCACG
10444666 23/25 TTTTTTTTTGTTTTTTTTTGTTTTT
10449688 22/24 CCCCCCCCCCCTTCCCCCCCCCCC
10455426 18/20 CCCCCCCCCCCCCCCCTACC
10463012 19/21 TTTTTATTTTTTATTTTTTTT
10483617 18/20 TTTTTTTTTTTTTAATTTTT
10486047 19/21 AAAAATTAAAAAAAAAAAAAA
10499107 18/20 TTTTTTGTTTTTTTTTTGTT
10548361 19/21 CCCCCCCCCCCCCCCCCCACG
10555996 23/25 TTTTTTTTTGTTTTTTTTTGTTTTT
10561017 22/24 CCCCCCCCCCCTTCCCCCCCCCCC
10566755 18/20 CCCCCCCCCCCCCCCCTACC
10574341 19/21 TTTTTATTTTTTATTTTTTTT
10643497 21/23 AAAAACAAAAAAAAAAACAAAAA
10655998 18/20 TTTTTGATTTTTTTTTTTTT
10684412 20/22 CCCCCCCCCCCCCCCCCCATCC
10692148 18/20 CCCCCCCCCCCCCCCCCCGG
10757138 18/20 AAAAAACAAAAAACAAAAAA
10757177 22/24 AAAAAAAAACCAAAAAAAAAAAAA
10757534 29/32 AAAAAAAAACAAAAAAAAAAACAAAAAAAAAC
10772398 24/26 CCCCCCCCCCCCCCCCCCCCCACCTC
10781271 19/21 AAAAAAAAAAAAAAAAAAGAT
10833919 19/21 GGGGGGGGGGGGGGGGGGGTC
10861814 20/22 CCCCCCCCCCCCCCCCGCCCAC
10865631 21/23 AAAAAAAAAGAAAATAAAAAAAA
10868879 21/23 TTTTTTTTATTTTCTTTTTTTTT
10872703 19/21 GGGGGGGGGGGGGGGGAGGAG
10910740 18/20 TTTTTTTTTGTTTTTTTTTC
10911582 20/22 CCCCCCCCCCCCCCCCCCCTGC
10911919 19/21 TTTTTTTTTTTTTTAATTTTT
10921471 19/21 TTTTTATTTTTTTTATTTTTT
10926566 18/20 AAAAAAAATAGAAAAAAAAA
10951357 18/20 AAAAAAAAAAAAATAAAAAT
10956840 19/21 TTTTTTTTTGTTTTTTTTTTG
11009872 18/20 TTTTTTTTTGTTGTTTTTTT
11027938 18/20 GGGGGGGGGGGGGGGGGGAC
11035486 18/20 GGGGGGGGGGGGGGGGGCAG
11037369 20/22 AAAAAAAACACAAAAAAAAAAA
11043861 21/23 GGGGGGGGGGGGGGGGGGGGGAA
11046426 19/21 TTTTTTTTTTTTTTTTTTTGA
11087398 18/20 AAAAAAAAAAAAAAGCAAAA
11090217 20/22 TTTTTTTTTTTTCATTTTTTTT
11106008 19/21 TTTTTTTTGTTGTTTTTTTTT
11132673 19/21 TTTTTTTTTTTTTTTAATTTT
11140479 24/26 TTTTTTTCTTTTTTTTTTTTTTTTTA
11142584 18/20 AAAAAATTAAAAAAAAAAAA
11143567 18/20 TTTTTTTTTCCTTTTTTTTT
11231236 24/26 TTTTTTTTTTTTTTTTTTTTTCTTTA
11244305 25/27 GGGGGGGGGGGGGGGGGGGGGGTGGGC
11260275 27/30 TTTTTTTTTTTTTTTTGGTTTTTTTTTTTG
11288226 18/20 TTTTTGTTCTTTTTTTTTTT
11313124 19/21 CCCCCCCCCCCCCCCCCACCA
11351602 18/20 TTTTTCTTTTGTTTTTTTTT
11356723 20/22 AAAAAAAAAAAAACAAGAAAAA
11600405 18/20 AAAAAAAAGGAAAAAAAAAA
11697599 19/21 TTTTTTTTTGTGTTTTTTTTT
11703849 21/23 GGGGGGGGGGGGGGGGGGGGAGT
11706928 20/22 AAAAAAAAATAATAAAAAAAAA
11766641 18/20 AAAAAAAAATTAAAAAAAAA
11774560 31/34 CCCCCCCCCCCCCCCCCCTCTCCCCCCCCCCCGC
11774846 20/22 GGGGGGGGGGGGGGGGGGGGAT
11780869 21/23 TTTTTTTTTCTTTTTTCTTTTTT
11784371 20/22 TTTTTTCTTTCTTTTTTTTTTT
11792473 24/26 TTTTTTTTTTTTTTGATTTTTTTTTT
11900629 19/21 TTTTTTTCCTTTTTTTTTTTT
11901816 20/22 TTTTTTTTTCTTTTTTTTTTCT
11997062 18/20 AAAAAAAAAAAAAAAACCAA
11997754 20/22 AAAAAAAAAAAAAAAAAAACTA
12017827 18/20 CCCCCCCCCCCCCCCCCCGG
12046921 19/21 TTTTTTTGTCTTTTTTTTTTT
12053751 19/21 TTTTTTTTTTTTGATTTTTTT
12054414 19/21 TTTTTGTTGTTTTTTTTTTTT
12087756 18/20 AAAAAAAACCAAAAAAAAAA
12088223 18/20 AAAAAAAAAAAAAAAAAATT
12160867 18/20 GGGGGGGGGGGGGGGGGAGA
12166299 19/21 TTTTTTTGTTTTTTTTTTTTG
12167287 19/21 TTTTTTTTTTCATTTTTTTTT
12175377 18/20 AAAAAAAAAAAAAAAAACTA
12241271 21/23 AAAAACTAAAAAAAAAAAAAAAA
12264740 20/22 CCCCCCCCCCCCCCCCCCCCGA
12328585 18/20 TTTTTTTTTTCGTTTTTTTT
12371031 21/23 GGGGGGGGGGGGGGGGGGGGAAG
12372616 21/23 AAAAAAAAAAAGAAAAAAAAGAA
12394039 18/20 AAAAAAAAAAAACGAAAAAA
12395555 19/21 TTTTTTTTTTTTAATTTTTTT
12396660 18/20 AAAAAAAAAACAAAAATAAA
12412911 18/20 AAAAAAAAATAAAAACAAAA
12430499 18/20 AAAAAAAAGAAAAGAAAAAA
12444101 18/20 AAAAAAAAAAAAACAGAAAA
12473743 20/22 TTTTTTTTCTTTCTTTTTTTTT
12521120 21/23 AAAAAAAAACCAAAAAAAAAAAA
12543490 19/21 TTTTTAATTTTTTTTTTTTTT
12544709 21/23 TTTTTTTTTTTTTAGTTTTTTTT
12582108 20/22 AAAAATGAAAAAAAAAAAAAAA
12594305 18/20 AAAAAATAAAAAAAAAAAAC
12601550 19/21 GGGGGGGGGGGGGGGGGGGTT
12607332 23/25 AAAAAAAAAATAAAAAAAGAAAAAA
12627083 20/22 GGGGGGGAGGGGGGGGGGGGGC
12627257 18/20 TTTTTTTTTTTTTTTTTTGG
12630185 20/22 TTTTTTTTTTTTTTTTTGGTTT
12630384 21/23 TTTTTTCTTTTTTTTTCTTTTTT
12643687 20/22 AAAAAAAAAACAAAAAAAAAAG
12666223 18/20 AAAAACAACAAAAAAAAAAA
12673446 19/21 TTTTTTTTTTTTTTAATTTTT
12707151 18/20 AAAAAAATCAAAAAAAAAAA
12752328 23/25 TTTTTTTTTATTTTTTTTATTTTTT
12776729 18/20 TTTTTTTTTTTTTTTTTTGG
12785036 18/20 TTTTTTGTTTTTTTTTGTTT
12786122 22/24 TTTTTTTTTTTTTTTTTTTTTTCA
12802147 24/26 GGGGGGGGGGGGGGGGGGGGGAGTGG
12810920 18/20 AAAAAAAAATCAAAAAAAAA
12811085 23/25 AAAAAAAAAAAACAAATAAAAAAAA
12811851 22/24 AAAAAAAGAAAAAAAAAAAAAAAT
12815498 20/22 AAAAAAAAAAAAAATAAATAAA
12815521 22/24 AAAAAAAAAAAAAAAAAAAAAAGC
12818490 18/20 TTTTTATTTTTTATTTTTTT
12860245 18/20 AAAAATTAAAAAAAAAAAAA
12916631 18/20 AAAAAAAAACGAAAAAAAAA
12936757 22/24 TTTTTTAGTTTTTTTTTTTTTTTT
12951515 21/23 CCCCCCCCCCCCCCCCCCCCTAC
12953640 25/27 TTTTTTTTTTTTTTTTTTTTTTTTTGA
12959570 22/24 CCCCCCCCCCCCCCCCCCCCCATC
12977463 19/21 AAAAAAAAAAAACGAAAAAAA
12988172 19/21 AAAAAAAAGAAAAAGAAAAAA
12988258 19/21 GGGGGGGGGGGGGGGGGGAGA
12993097 18/20 TTTTTTTTTAATTTTTTTTT
12994849 24/26 CCCCCCCCCCCCCCCCCCCCCCGACC
12996212 18/20 AAAAAAAAAAAAGAACAAAA
12997904 20/22 GGGGGGGGGGGGGGGGGGGAAG
13009945 19/21 CCCCCCCCCCCCCCCCCCCAA
13082152 21/23 AAAAAAAAACAAAAAAAAACAAA
13090666 18/20 TTTTTATTCTTTTTTTTTTT
13099740 19/21 AAAAAAACAAAAAAAAAAGAA
13139687 18/20 TTTTTTATTTTTTATTTTTT
13177280 25/27 CCCCCCCCCCCCCCCCCCCCCCCTCTC
13213067 27/30 TTTTTTTTTTTTTTTTAATTTTTTTTTTTA
13225727 32/35 AAAAAAAATATAAAAAAAAAAAAAAAAAAAAAAAC
13245342 18/20 AAAAAAAAAAACAAAAAAAG
13251025 19/21 AAAAAAAAAAAAAATCAAAAA
13252092 33/36 AAAAAAAAAAAAAAATTAAAAAAAAAAAAAAAAAAT
13254544 21/23 AAAAAAAAAAAAGCAAAAAAAAA
13256660 18/20 AAAAAACTAAAAAAAAAAAA
13262552 21/23 TTTTTTTTTTTCATTTTTTTTTT
13267489 18/20 AAAAAAAAAAAAAAAAAACG
13294343 19/21 AAAAAAAACCAAAAAAAAAAA
13321885 18/20 AAAAAAAAGAGAAAAAAAAA
13381422 22/24 AAAAAAAAAAAAACCAAAAAAAAA
13508483 22/24 TTTTTTTTTTTTCTTTTTTTTTCT
13520195 23/25 TTTTTGTTTTTTTTTGTTTTTTTTT
13544825 18/20 TTTTTTTTTTATTTTTATTT
13598912 23/25 TTTTTTTTGTTTTTTTTTCTTTTTT
13636952 18/20 AAAAAACCAAAAAAAAAAAA
13657599 19/21 TTTTTTTTTGTGTTTTTTTTT
13687420 18/20 AAAAAAAAAAAAAACGAAAA
13712779 19/21 AAAAAAATAACAAAAAAAAAA
13741222 18/20 TTTTTTTTTGATTTTTTTTT
13753393 19/21 AAAAAAAAACAAAATAAAAAA
13771848 18/20 AAAAAAAAAAATTAAAAAAA
13796510 23/25 TTTTTTTTGTTTTTTTTTCTTTTTT
13803563 24/26 TTTTTTTTTTTTTTGATTTTTTTTTT
13834038 19/21 TTTTTTTAATTTTTTTTTTTT
13849792 19/21 TTTTTTTTTTTTTTTTTTAGT
13851724 20/22 AAAAAAAAAAAAAAGAAAAGAA
13866577 33/36 AAAAAAAAAAAAAAAAAAAAAAAAAAATTAAATAAA
13880731 21/23 AAAAAAAAAAAAAAAAAAATGAA
13889750 19/21 TTTTTATTTTTTTTTTTTTTG
13910295 21/23 TTTTTTTCTTTTCTTTTTTTTTT
13930205 26/28 AAAAAAAAAAAAAAAAAAAGAAGAAAAA
13940019 20/22 AAAAAAAAAAAAGAAAGAAAAA
13954128 19/21 TTTTTTTTTTTCTTTTTCTTT
13955437 25/27 AAAAAAAAAAAAAAAAAGAAAAGAAAA
13981028 25/27 TTTTTTTTTTTTTTTTTTTTTTTTTGA
14011204 18/20 TTTTTTTTTTTTCTTTCTTT
14011404 24/26 TTTTTTTTTTTTTTTTTTTTTTCCTT
14012489 23/25 AAAAAAAAAAAAAAAGAAAAAAAAG
14036686 20/22 AAAAAAAAAAAAAAAAGAAACA
14045892 22/24 AAAAAAAAAGAAGAAAAAAAAAAA
14059344 23/25 TTTTTTTTTTTTTTTTTTTTCATTT
14061285 21/23 AAAAAAAAAAAAAAAAAAGGAAA
14096815 45/50 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATGTGT
14102094 18/20 AAAAAAAAAAAAGGAAAAAA
14102119 19/21 AAAAAAAAAAAGAAAAAAATA
14102276 18/20 AAAAAATAAAGAAAAAAAAA
14123579 19/21 TTTTTTTTTTTTGTTTTTTTC
14124620 20/22 AAAAAAAAAATCAAAAAAAAAA
14164235 18/20 AAAAAAAAAAAAACAGAAAA
14207870 20/22 AAAAAAAAAAAAAAAAAAACAT
14236445 18/20 TTTTTTTTTGATTTTTTTTT
14248616 19/21 AAAAAAAAACAAAATAAAAAA
14267073 18/20 AAAAAAAAAAATTAAAAAAA
14283240 18/20 TTTTTTTTTTTTGGTTTTTT
14314890 18/20 AAAAAAAAAAGGAAAAAAAA
14380878 32/35 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCATAT
14415530 19/21 TTTTTTTTTTGTTATTTTTTT
14456017 28/31 TTTTTTTTTTTTTTTTTTTTTTTTNTCTTCT
14461768 21/23 AAAAAAAAAAAAACAAAAAAAAT
14475283 20/22 TTTTTTATTTTGTTTTTTTTTT
14503193 32/35 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCATAT
14531400 19/21 TTTTTTTTTTTTGTTTTTTTC
14532441 20/22 AAAAAAAAAATCAAAAAAAAAA
14572056 18/20 AAAAAAAAAAAAACAGAAAA
14610619 18/20 AAAAAAAAAAGGAAAAAAAA
14616493 20/22 GGGGGGGGGGGGGGGGGTGGTG
14619045 19/21 TTTTTTTTTTTTTTTTTTTAG
14621768 19/21 AAAAAAAAAACCAAAAAAAAA
14636963 18/20 TTTTTTTTTCTTTATTTTTT
14637030 19/21 TTTTTTTTCTTTTTTTTCTTT
14637121 19/21 TTTTTTTCTTTTTTTTTTTGT
14637145 18/20 TTTTTTCCTTTTTTTTTTTT
14664213 20/22 AAAAAAAAGAATAAAAAAAAAA
14687637 19/21 TTTTTTTTTTTTGTTTTTTTC
14693269 32/35 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCATAT
14721950 19/21 TTTTTTTTTTTTGTTTTTTTC
14722991 20/22 AAAAAAAAAATCAAAAAAAAAA
14762608 18/20 AAAAAAAAAAAAACAGAAAA
14801172 18/20 AAAAAAAAAAGGAAAAAAAA
14807046 20/22 GGGGGGGGGGGGGGGGGTGGTG
14809598 19/21 TTTTTTTTTTTTTTTTTTTAG
14812321 19/21 AAAAAAAAAACCAAAAAAAAA
14827516 18/20 TTTTTTTTTCTTTATTTTTT
14827583 19/21 TTTTTTTTCTTTTTTTTCTTT
14827674 19/21 TTTTTTTCTTTTTTTTTTTGT
14827698 18/20 TTTTTTCCTTTTTTTTTTTT
14907964 21/23 AAAAAAAAAAAAACAAAAAAAAT
14921477 20/22 TTTTTTATTTTGTTTTTTTTTT
14952878 19/21 AAAAAAAAAAGGAAAAAAAAA
14964337 29/32 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCATT
15003961 26/28 AAAAAAAAAAGAAAAAAAAAGAAAAAAA
15008191 25/27 TTTTTTTTTTTTTCTTTTTTTTTCTTT
15008701 26/28 AAAAAAAAAAGAAAAAAAAAGAAAAAAA
15019477 20/22 GGGGGGGGGGGGGGGGGGGGTA
15026368 22/24 TTTTTTTTTTTTTTTTAATTTTTT
15028489 22/24 TTTTTTTTTTTTTTTTTTTTTTGA
15044530 18/20 TTTTTTTGATTTTTTTTTTT
15060228 25/27 TTTTTTTTTTTTTCTTTTTTTTTCTTT
15060738 26/28 AAAAAAAAAAGAAAAAAAAAGAAAAAAA
15080255 19/21 CCCCCCCCCCCCCCCCCCGCA
15103907 19/21 AAAAAAAAAAGAAAAAATAAA
15115311 21/23 TTTTTTTTTGGTTTTTTTTTTTT
15135798 20/22 TTTTTTTTTTTTCTTTTTTTTA
15139621 18/20 CCCCCCCCCCCCCCCCCTTC
15151982 18/20 GGGGGGGGGGGGGGGGGGNN
15188381 18/20 TTTTTTTGATTTTTTTTTTT
15200871 21/23 AAAAAAAAAAAAACAAAAAAAAT
15214386 20/22 TTTTTTATTTTGTTTTTTTTTT
15245791 19/21 AAAAAAAAAAGGAAAAAAAAA
15257250 29/32 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCATT
15270611 20/22 GGGGGGGGGGGGGGGGGGGGTA
15277502 22/24 TTTTTTTTTTTTTTTTAATTTTTT
15279624 22/24 TTTTTTTTTTTTTTTTTTTTTTGA
15295665 18/20 TTTTTTTGATTTTTTTTTTT
15311361 25/27 TTTTTTTTTTTTTCTTTTTTTTTCTTT
15311871 26/28 AAAAAAAAAAGAAAAAAAAAGAAAAAAA
15331392 19/21 CCCCCCCCCCCCCCCCCCGCA
15344557 19/21 TTTTTTTTTTCCTTTTTTTTT
15350424 24/26 AAAAAAAAAGAAAAAAAAAGAAAAAA
15350701 19/21 AAAAAAAATAAAAAGAAAAAA
15350767 18/20 AAAAAAAAAAGAAAAAATAA
15350999 18/20 AAAAAAAAGAAAAAAAAAAC
15351020 18/20 AAAAAAAAAAGAAAAAATAA
15351263 18/20 AAAAAAAAGAAAAAAAAAAC
15351339 19/21 AAAAAAAATAAAAAGAAAAAA
15369121 21/23 AAAAAAAAAAAAGAAAAAAAGAA
15373901 21/23 CCCCCCCCCCCCCCCCCCCCCTA
15374581 18/20 GGGGGGGGGGGGGGGGGGTA
15406511 18/20 AAAAAAAAAAAAAAAAAACT
15409568 18/20 AAAAAGAAATAAAAAAAAAA
15438044 18/20 TTTTTTGTTTTTTGTTTTTT
15447586 23/25 TTTTTTTTTTTTTTTTTAATTTTTT
15457956 27/30 GGGGGGGGGGGGGGGGGGGGGGGGGGTGTC
15471779 18/20 CCCCCCCCCCCCCCCCCCGG
15502465 18/20 AAAAAAAGAAGAAAAAAAAA
15506110 19/21 AAAAAAAAAAAACAAAAAAAT
15539588 23/25 CCCCCCCCCCCCCCCCCCCCCCCGG
15552531 21/23 GGGGGGGGGGGGGGGGGGTGGGT
15578038 18/20 TTTTTTTTTTTTTTTTTGGT
15607379 18/20 AAAAAAAAAAAAAGAACAAA
15610411 18/20 AAAAAAAAAATAGAAAAAAA
15649536 19/21 TTTTTTTTTCCTTTTTTTTTT
15659813 18/20 AAAAAAAAAGAAAAAAAAAT
15696112 21/23 AAAAAAGAAAAAAGAAAAAAAAA
15752507 21/23 TTTTTTTTTTTTTTTTTTTTTGG
15806936 18/20 AAAAAAAGAAAAAAAAACAA
15811662 18/20 GGGGGGGGGGGGGGGGGTTG
15813021 18/20 TTTTTATGTTTTTTTTTTTT
15819206 20/22 CCCCCCCCCCCCCACCCCCCCA
15833234 20/22 TTTTTTTTTTATTCTTTTTTTT
15834380 24/26 CCCCCCCCCCCCCCCCCCCCCCCGCA
15847654 18/20 TTTTTTTTTTTTTTTTTGGT
15876995 18/20 AAAAAAAAAAAAAGAACAAA
15880027 18/20 AAAAAAAAAATAGAAAAAAA
15919151 19/21 TTTTTTTTTCCTTTTTTTTTT
15929428 18/20 AAAAAAAAAGAAAAAAAAAT
15965727 21/23 AAAAAAGAAAAAAGAAAAAAAAA
16022122 20/22 TTTTTTTTTTTTTTTTTTTTGG
16076552 18/20 AAAAAAAGAAAAAAAAACAA
16081277 18/20 GGGGGGGGGGGGGGGGGTTG
16082636 18/20 TTTTTATGTTTTTTTTTTTT
16088822 20/22 CCCCCCCCCCCCCACCCCCCCA
16134638 18/20 TTTTTTGTTTTTTGTTTTTT
----------------------------------------------------------------------------
Total sequence length......................... 16183833
Total number of repeats detected.............. 553
----------------------------------------------------------------------------
Minimum single nucleotide repeat length....... 20
Maximum mismatch allowed...................... 10%
----------------------------------------------------------------------------
Length distribution of single nucleotide repeats
Repeat_length A T G C
20 to 29 233 201 46 53
30 to 39 6 7 2 4
40 to 49 0 0 0 0
50 to 59 1 0 0 0
60 to 69 0 0 0 0
70 to 79 0 0 0 0
80 to 89 0 0 0 0
90 to 99 0 0 0 0
100 and more 0 0 0 0
----------------------------------------------------------------------------
Total 240 208 48 57
----------------------------------------------------------------------------
Mono-Nucleotide Repeats in C. elegans Chromosome-I complete sequence
Minimum repeat length = 20 (allowing maximum 10% mismatch)
Total 1 sequences searched with 16183833 base pairs
Total 553 repeats covering 11067 / 12195 base pairs
Length distribution of all Mono-nucleotide repeats
---------------------------------------------------------------------------------------------------------
repeat-length 20-29 30-39 40-49 50-59 60-69 70-79 80-89 90-99 100-and-more
no. of repeats 533 19 0 1 0 0 0 0 0
---------------------------------------------------------------------------------------------------------
Number of repeats
----------------------------------------------------------------------------------------
Sequence A T G C
----------------------------------------------------------------------------------------
lcl|worm_chr_I 16183833 bp 240 208 48 57
----------------------------------------------------------------------------------------
Total 16183833 bp 240 208 48 57
----------------------------------------------------------------------------------------
Repeats >= 40 bp Total> 1 1 0 0 0
----------------------------------------------------------------------------------------
© Division of Biochemical Sciences, National Chemical Laboratory, Pune 411008, INDIA